Metagenome Family F096283

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096283
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	45 residues
Representative Sequence	MKKLLTLTSIISTMAVLALMAGCQTVATNQAELAASKKEFLLA
Number of Associated Samples	94
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	35.24 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	94.29 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.286 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (22.857 % of family members)
Environment Ontology (ENVO)	Unclassified (36.190 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.75% β-sheet: 0.00% Coil/Unstructured: 42.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13505	OMP_b-brl	1.90
PF00072	Response_reg	0.95
PF03729	DUF308	0.95
PF04366	Ysc84	0.95
PF01979	Amidohydro_1	0.95
PF12710	HAD	0.95
PF06742	DUF1214	0.95
PF06474	MLTD_N	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	Cell wall/membrane/envelope biogenesis [M]	0.95
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.95
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.95
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.95
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	29.52 %
Unclassified	root	N/A	5.71 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	4.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	29.52 %
Unclassified	root	N/A	5.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	27.62 %
Unclassified	root	N/A	5.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.95 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.62 %
Unclassified	root	N/A	5.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.62 %
Unclassified	root	N/A	5.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02GY8AY	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
2170459005\|F1BAP7Q02H829Y	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300000955\|JGI1027J12803_101901476	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300000956\|JGI10216J12902_114494651	Not Available	606	Open in IMG/M
3300004643\|Ga0062591_102858024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300005166\|Ga0066674_10151847	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005166\|Ga0066674_10361777	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005172\|Ga0066683_10339033	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300005174\|Ga0066680_10131232	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300005176\|Ga0066679_10761331	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300005179\|Ga0066684_10356582	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300005180\|Ga0066685_11155381	Not Available	504	Open in IMG/M
3300005186\|Ga0066676_10528311	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005288\|Ga0065714_10164946	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300005332\|Ga0066388_107707750	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300005334\|Ga0068869_101655027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300005437\|Ga0070710_10727740	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005445\|Ga0070708_100067974	All Organisms → cellular organisms → Bacteria	3202	Open in IMG/M
3300005446\|Ga0066686_10067926	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300005450\|Ga0066682_10055193	All Organisms → cellular organisms → Bacteria	2418	Open in IMG/M
3300005451\|Ga0066681_10848498	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005468\|Ga0070707_101707609	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005543\|Ga0070672_101749240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300005544\|Ga0070686_101405485	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300005552\|Ga0066701_10103591	All Organisms → cellular organisms → Bacteria → Proteobacteria	1666	Open in IMG/M
3300005552\|Ga0066701_10975026	Not Available	501	Open in IMG/M
3300005563\|Ga0068855_100853129	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300005598\|Ga0066706_11195988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300005764\|Ga0066903_103263854	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300005764\|Ga0066903_107943772	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300005764\|Ga0066903_108415331	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005937\|Ga0081455_10533523	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300009012\|Ga0066710_103262257	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300009162\|Ga0075423_12484667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300010304\|Ga0134088_10597455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300010320\|Ga0134109_10023720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1905	Open in IMG/M
3300010329\|Ga0134111_10105121	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300010364\|Ga0134066_10330095	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300010376\|Ga0126381_102638570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300010376\|Ga0126381_102891735	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300012198\|Ga0137364_10592639	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300012198\|Ga0137364_10827601	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
3300012203\|Ga0137399_11207869	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300012205\|Ga0137362_11657970	Not Available	526	Open in IMG/M
3300012211\|Ga0137377_10051701	All Organisms → cellular organisms → Bacteria	3799	Open in IMG/M
3300012211\|Ga0137377_10127505	All Organisms → cellular organisms → Bacteria	2429	Open in IMG/M
3300012211\|Ga0137377_11965439	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300012285\|Ga0137370_10267210	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300012353\|Ga0137367_10164610	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300012356\|Ga0137371_11212105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300012357\|Ga0137384_10449172	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1061	Open in IMG/M
3300012360\|Ga0137375_11300549	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300012361\|Ga0137360_10465691	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300012362\|Ga0137361_10857195	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300012685\|Ga0137397_10863964	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300012685\|Ga0137397_10988807	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	620	Open in IMG/M
3300012922\|Ga0137394_10713984	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300012925\|Ga0137419_11617797	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300012929\|Ga0137404_11736737	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300012930\|Ga0137407_12247925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300012972\|Ga0134077_10480461	Not Available	548	Open in IMG/M
3300013297\|Ga0157378_12760010	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300013308\|Ga0157375_12393076	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	630	Open in IMG/M
3300014154\|Ga0134075_10232099	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	796	Open in IMG/M
3300015241\|Ga0137418_10994728	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300015356\|Ga0134073_10261782	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300015358\|Ga0134089_10488795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300015374\|Ga0132255_105228857	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300016357\|Ga0182032_11146499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300016422\|Ga0182039_12071133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300017657\|Ga0134074_1097991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1006	Open in IMG/M
3300017657\|Ga0134074_1357972	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300018054\|Ga0184621_10056253	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300018061\|Ga0184619_10095596	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1331	Open in IMG/M
3300018066\|Ga0184617_1046698	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1088	Open in IMG/M
3300018482\|Ga0066669_12001811	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300019996\|Ga0193693_1062883	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300020001\|Ga0193731_1086395	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300020004\|Ga0193755_1103303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	900	Open in IMG/M
3300020170\|Ga0179594_10170367	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300021411\|Ga0193709_1068803	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300021418\|Ga0193695_1013902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1638	Open in IMG/M
3300021432\|Ga0210384_11579161	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300021445\|Ga0182009_10825740	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300025901\|Ga0207688_11055444	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300025941\|Ga0207711_10816607	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300026305\|Ga0209688_1093327	Not Available	553	Open in IMG/M
3300026324\|Ga0209470_1083948	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300026343\|Ga0209159_1083652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1430	Open in IMG/M
3300026343\|Ga0209159_1239405	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300026537\|Ga0209157_1033628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2929	Open in IMG/M
3300026540\|Ga0209376_1383558	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300026542\|Ga0209805_1148209	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300026557\|Ga0179587_10834453	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300027461\|Ga0207601_105618	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	782	Open in IMG/M
3300028819\|Ga0307296_10238589	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300028828\|Ga0307312_10163990	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1415	Open in IMG/M
3300028875\|Ga0307289_10145082	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300031573\|Ga0310915_10527101	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	839	Open in IMG/M
3300031740\|Ga0307468_100303466	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300031890\|Ga0306925_10919097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	898	Open in IMG/M
3300031912\|Ga0306921_11861354	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300031942\|Ga0310916_10380534	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300031954\|Ga0306926_11322975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	840	Open in IMG/M
3300033412\|Ga0310810_11301407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.52%
Host-Associated	Host-Associated	10.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.67%
Plants	Host-Associated → Plants	10.48%
Aquatic	Environmental → Aquatic	2.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.76%
Sediment	Environmental → Aquatic → Sediment	2.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.05%
Loam	Environmental → Terrestrial → Soil → Loam	7.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.95%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027461	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE15-E (SPAdes)	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_02209320	2065487018	Soil	VIHENVKQLLRVATLTNVATAMATLLLVAACQTVATNDAELAASKKEFL
E41_12509390	2170459005	Grass Soil	MRRLSIPTSIAGIGAVLMLIAACQTVATNNAELAASKKEFLLAQSGFKVI
JGI1027J12803_1019014761	3300000955	Soil	MRKLSTLTGIAGIGTFLTLMAACQTVATNDAELAASKKEFLLAQSGFKV
JGI10216J12902_1144946512	3300000956	Soil	MKKLLTLTSLVSGVAVLALVAGCQTMATNQSEITTSKKENLLAQAGFKVKTVTTPKQQ
Ga0062591_1028580241	3300004643	Soil	MKQLSTLKIIAAVAPLALMVACQTVAINDAELAASKKEFLLAQSGFKVITVTTA
Ga0066674_101518471	3300005166	Soil	VKKLLTLTTIAIAMAVLTLMSACQTVATNDAELVASKKEF
Ga0066674_103617772	3300005166	Soil	MKKLLSLTTIAGIGAVLTLMAACQTATTNQAELAGSKKEFLLAQSGFKVIT
Ga0066683_103390333	3300005172	Soil	LVSNVKKLLTLTSIAIAMAALALISACQTVATNNAELAASK
Ga0066680_101312321	3300005174	Soil	MRHMKEVLTLTNIAGSMAALTLMAACQTVATNNAELAASKKEFLL
Ga0066679_107613312	3300005176	Soil	MKKLLTLTSTVSALAVLALITACQTATTNQAELTASKTEFLLAQSGFKVI
Ga0066684_103565823	3300005179	Soil	MKKLFTLTHLVSGMAVLALIAACQTVATNQAELATSKKEFLLAQAGFKTKTVTT
Ga0066685_111553812	3300005180	Soil	MKKLLTLTSLISGMAVLALIAGCQTVATNQGELAASKKEFLLAQAGFKT
Ga0066676_105283112	3300005186	Soil	MKKLFTLTNLISGMAVLALVAGCQTVATNQGELAASKKEFLLAQA
Ga0065714_101649463	3300005288	Miscanthus Rhizosphere	MKQLSTLTNLVAATAALMLMAACQTVATNETELAASRKEFL
Ga0066388_1077077501	3300005332	Tropical Forest Soil	MKKRPTLTSRASIGAILALMAACQTVATNDAELAASKKEFLLAQTRTIVG
Ga0068869_1016550271	3300005334	Miscanthus Rhizosphere	MKQLSTLANLVAATAALMLMAVCQTVATNDAELAASRKEF
Ga0070710_107277401	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LVGNVKKLLALTTIAIAIAALALISACQTVATNNAELAASKKEFLLAQSGFKVIT
Ga0070708_1000679741	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VKKLSTLTTIAIAMAALTLMAACQTVATNDAELVASKKEFLLAQS
Ga0066686_100679261	3300005446	Soil	MKKLLTLTSFVGSVTVLVLLTACQTVATNQAELTASKKEFMLAQSG
Ga0066682_100551934	3300005450	Soil	VKKLLTLTTIAIAMAVLELMSACQTVATNDAELVASKKEFLLAQSGFKVIT
Ga0066681_108484981	3300005451	Soil	VKKLLTLTTIAIAMAVLTLMSACQTVATNDAELVASKKEFLLAQSGF
Ga0070707_1017076091	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VKKLLTLTTIAIAMAALALISACQTVATNNAELAASKKEFLLA
Ga0070672_1017492401	3300005543	Miscanthus Rhizosphere	MKQLSTLANLVAATAALILMAACQAVATNNAELAASKKEFLLAQSGFKV
Ga0070686_1014054851	3300005544	Switchgrass Rhizosphere	MKQLSTLTNLVAATAALMLMAACQTVATNDAELAASRKEFLL
Ga0066701_101035915	3300005552	Soil	MKKPLTLTSIASTIAVVTLIAACQTVATNNAEIAASKK
Ga0066701_109750262	3300005552	Soil	MKKLLTLTSIASTVAVLALIASCQTVATNNAEIAASKKQNLL
Ga0068855_1008531291	3300005563	Corn Rhizosphere	MKQLSTLANLVAATAALILMAACQAVATNNAELAASKKEFLLA
Ga0066706_111959882	3300005598	Soil	MKQLSTLANLVAATVALMLMSACQTVATNDAELVASKKEFLLAQSGF
Ga0066903_1032638543	3300005764	Tropical Forest Soil	MKQLATLTSVVGAAAALMLMAGCQTVATNNAELAASKKEFLLAQSG
Ga0066903_1079437722	3300005764	Tropical Forest Soil	MKQLTTLANLVLVTAALMVMAACQTVATNDAELVASKKEFLLA
Ga0066903_1084153313	3300005764	Tropical Forest Soil	MKQVLTLTNVVAATAALMLMVACQTVATNDAELVASKKEFLL
Ga0081455_105335233	3300005937	Tabebuia Heterophylla Rhizosphere	MKQLSTLTNLVLGIAALMLMAACQTVAVNDAELAASREEFLLAQS
Ga0066710_1032622571	3300009012	Grasslands Soil	MKKLFTLTHLVSGMAVLALIAACQTVATNQAELATSKKEFLLAQAGFKTKT
Ga0075423_124846672	3300009162	Populus Rhizosphere	MKQVLTLTNIAGSMAALALMAACQTVATNNAELAASKKEFLLAQS
Ga0134088_105974552	3300010304	Grasslands Soil	MKKLVTVTSIVSSMAVLALIAACQTVATNNAEIAASKKQNLLAQSGFKVI
Ga0134109_100237201	3300010320	Grasslands Soil	MKKLLTLTSIASTVAVLALIAACQTVATNNAQIAASKKQNLL
Ga0134111_101051211	3300010329	Grasslands Soil	LVSKLYRGNVKKLLTLTTIAIAMAVLTLMSACQTVATNDAELVASKKEFLLAQS
Ga0134066_103300952	3300010364	Grasslands Soil	MKKLLTLTSIASTVAVLALIAACQTVATNNAQIAASKK
Ga0126381_1026385702	3300010376	Tropical Forest Soil	MKTLITLTSIVGIAAVLALMAACQTIATNDAELAASKKEFLLVQSGFKQI
Ga0126381_1028917351	3300010376	Tropical Forest Soil	VIRENVKQLLNVAKVTNVVIAMAALVLMEACQTVATNDAELVASKKEFLLAQSGFKVIT
Ga0137364_105926392	3300012198	Vadose Zone Soil	MKKLFTLTHLVSGMAVLALIAACQTVATNQGELAASKKEFLLAQAGFKTKTV
Ga0137364_108276013	3300012198	Vadose Zone Soil	MKQLSTLANLVAATAALMLMSACQTVATNDAELVASKKEFLLAQS
Ga0137399_112078692	3300012203	Vadose Zone Soil	LVGKVKKLLTLTTIAIAMAALALISACQTVATNNAEIVASQKENLLAQS
Ga0137362_116579702	3300012205	Vadose Zone Soil	MKKLVTLTGIVSAMAMLALLAGCQTMATNSSEIAASKKQSLLTQAGFKFITITTP
Ga0137377_100517011	3300012211	Vadose Zone Soil	MKTLLTSIVSTVAVVALITACQTVGTNNAEIVASQKEALLSQSGFK
Ga0137377_101275051	3300012211	Vadose Zone Soil	MKKLLTLTSIASTVAVLALITACQTVATNNAETAASKKQNLLAQAGFKFIAVT
Ga0137377_119654392	3300012211	Vadose Zone Soil	MKQLSTLANLVAATAALMLMAACQTVATNDAELAASRKEFLLAQSGF
Ga0137370_102672101	3300012285	Vadose Zone Soil	MKQLSTLANLVAATAALMLMSACQTVATNDAQLAASRKEFLLAQSGFKV
Ga0137367_101646103	3300012353	Vadose Zone Soil	MKKLSILTTIASALVVMALITACQTIATNQAELTASKKEFLLAQSGFKV
Ga0137371_112121052	3300012356	Vadose Zone Soil	MKKLLTSIISTVAVVALITACQTVATNNAEIIASQKENLLVQSGFKVITVTTHK
Ga0137384_104491723	3300012357	Vadose Zone Soil	MKKLLPLTGIVSAMAILALVAGCQTMATNQAELATSKKENLLAQAGFKV
Ga0137375_113005492	3300012360	Vadose Zone Soil	MKKLYILTSLGSATAVLALITACQTAGTNQAELTASKKEFL
Ga0137360_104656914	3300012361	Vadose Zone Soil	LVSKLYRSNVKKLLTLTTIAIAMAVLALMSACQTVATNDAELVASKKE
Ga0137361_108571951	3300012362	Vadose Zone Soil	MKKLLTLTSIASTVAVLALIAACQTVATNQAEIAASKKQNLLAQAGFKFIAVTTPKQQ
Ga0137397_108639642	3300012685	Vadose Zone Soil	MKKLLTLTSIVSTLAVLALMTACQTVATNNGEIASSQKEKMLAQAGF
Ga0137397_109888073	3300012685	Vadose Zone Soil	VKKLSTLTTIAIAMAALALMSACQTVATNDAELAASK
Ga0137394_107139841	3300012922	Vadose Zone Soil	VKKLSTLTTIAIAMAALALMPACQTVATNDAELVASK
Ga0137419_116177972	3300012925	Vadose Zone Soil	LVSKLYRDNVKKLLTLTTIPIAMAVLALMSACQTVVTNDAELVASKKEFLLAQSGFKVITVT
Ga0137404_117367371	3300012929	Vadose Zone Soil	MKKLLTLTRIAGIGAVLILMAACQTATTNQAELTASKKE
Ga0137407_122479251	3300012930	Vadose Zone Soil	MKTLLTSIVSTVAVVALITACQTVATNNAELAASKKEYLLTQSG
Ga0134077_104804611	3300012972	Grasslands Soil	MKKLFTLTSIASTIAILALIAACQTVATNQGELATSKKEFLLAQAGFKTKTV
Ga0157378_127600101	3300013297	Miscanthus Rhizosphere	LVGESYRDNVKKLSTLTTIAVAMAALALISACQTVATNDAEL
Ga0157375_123930763	3300013308	Miscanthus Rhizosphere	VKKLLTLTTIATAMAALALISACQTVATNDAELAASKKEFLLAQS
Ga0134075_102320991	3300014154	Grasslands Soil	MKKLFRLTSIVSAMAVLALVAGCQTVATNQAELAASKKEFLL
Ga0137418_109947281	3300015241	Vadose Zone Soil	VKKLLILTTIAIAMAALALISACQTVASNNAELAASKKEFLL
Ga0134073_102617821	3300015356	Grasslands Soil	MKKLFTLTHLVSGMAVLALIAACQTVATNNAELATSKKEMLLAQAG
Ga0134089_104887951	3300015358	Grasslands Soil	MKKLLTLTSIISTMAVLALMAGCQTVATNQAELAASKKEFLLA
Ga0132255_1052288571	3300015374	Arabidopsis Rhizosphere	VKQLSILTNLLGAVAALTLMAACQTVATNNAELAASRKEFLLAQS
Ga0182032_111464992	3300016357	Soil	MKQLSTLTKVVGATAALALMAACQTVAINDAELAASKKE
Ga0182039_120711332	3300016422	Soil	MKKRSTPARIASIGAILALMAACQTVATNDAELIASKK
Ga0134074_10979913	3300017657	Grasslands Soil	MKTLLTSIVSTVAVVALITACQTVATNNAELAASKKEYLLTQS
Ga0134074_13579722	3300017657	Grasslands Soil	MKKLLTLPSIISTIAILALIAACQTVATNNAEIAASKKQNLL
Ga0184621_100562531	3300018054	Groundwater Sediment	MKKLLTLANIVSAMAILALVAGCQTMATNSGEIAASKKQNLLTQAGFKF
Ga0184619_100955962	3300018061	Groundwater Sediment	MKKLYIPTSIAGAMAVMALITACQTVATNNAELTASKKEFLLAQS
Ga0184617_10466981	3300018066	Groundwater Sediment	MKKLLTLTSIAGIGAVLIVMAACQTVATNSAELTASKKEFLLAQSGFKV
Ga0066669_120018112	3300018482	Grasslands Soil	MKKLFTLTSIASTIAILALIAACQTVATNQGELAASKKEFLLAQAGFKTKTVTT
Ga0193693_10628831	3300019996	Soil	MKKLSTLTGIVSAIAALALITACQTVATNNAEIAASKKQN
Ga0193731_10863951	3300020001	Soil	MKKLLTLTSTAGIGAVLILMAACQTVATNQAELVASKKEFLLAQSGFKV
Ga0193755_11033031	3300020004	Soil	MKKLLTLTGNVSTVAILALIAACQTVATNNAEIVASQKENLL
Ga0179594_101703673	3300020170	Vadose Zone Soil	MKKLFTLTSIASTVAVLALMVACQTVATNNAAIAA
Ga0193709_10688031	3300021411	Soil	MKKLLTLTSTAGIGAVLILMAACQTVATNQAELVASKKEFLLAQ
Ga0193695_10139021	3300021418	Soil	MKKLSTLTGIVTAMAVLTLIAACQTVATNSSEIAAS
Ga0210384_115791612	3300021432	Soil	MKQLSTLRNVVGATAVLALMAACQTVATNDAELAASKKEFLL
Ga0182009_108257402	3300021445	Soil	MNKPVKLTAIVAAIAAVVLMAACQTVATNDAELVASRKEFLL
Ga0207688_110554441	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKQLSTLKIIAAVAPLALMVACQTVAINDAELAASKKEFLLARSGFKVITV
Ga0207711_108166073	3300025941	Switchgrass Rhizosphere	LVNKSYKGNVRKLLKLTSIAISMAALALISACQTVATNNAELAA
Ga0209688_10933271	3300026305	Soil	MKKLLTLTNIASAAAVLALVVACQTATTNQAELAASKKEFLLAQSGFKV
Ga0209470_10839481	3300026324	Soil	VKKLLTLTTIAIAMAVLTLMSACQTVATNDAELVASKKEFL
Ga0209159_10836521	3300026343	Soil	MKKLLTLTSIASTVAVLALIAACQTVATNNAEIAASKKQNLLAQAGFK
Ga0209159_12394051	3300026343	Soil	MKKLLTLTSFVSGIAILALIAACQTVATNNAEIAASKKQNLLAQAGFRVKQ
Ga0209157_10336281	3300026537	Soil	MKKLLTLTSIASTVAVLALIAACQTVATNNAEIAASKKQNLLAQA
Ga0209376_13835581	3300026540	Soil	MKKLLTLTSIISTMAVLALMAGCQTVATNQAELAAS
Ga0209805_11482092	3300026542	Soil	MKKLLTLTGIVSATAILALVAGCQTAATNQAELATSKKE
Ga0179587_108344531	3300026557	Vadose Zone Soil	MKKLFTLTSIASTVAVLALMVACQTVATNNAAIAASQKENLLTQAGF
Ga0207601_1056181	3300027461	Soil	MKQLSILRNVVGATVALALMSACQTVATNDAELVASKKEF
Ga0307296_102385891	3300028819	Soil	LVGNVKKLLALATIAIAMAALALMSACQTVANNNAELAASKKEF
Ga0307312_101639903	3300028828	Soil	MKKLLTLTGNVSTVAILALIAACQTVATNNAEIVA
Ga0307289_101450821	3300028875	Soil	MKKISNLTGIASTMAALALIAACQTVATNNAELVASKK
Ga0310915_105271012	3300031573	Soil	MKKLITLTSIVGIAAVLALMPACQTIATNDAELAASKKE
Ga0307468_1003034663	3300031740	Hardwood Forest Soil	MKQLSTLANLVAATATLMLMAACQTVATNNAELAA
Ga0306925_109190971	3300031890	Soil	MKQLSTLTKVVGATAALALMAACQTVAINDAELAPSKKEF
Ga0306921_118613541	3300031912	Soil	MKQLSTLRIIAAVAPLALMVACQTVAINDAELAASKKEFLLAQSGFKVITVTTAK
Ga0310916_103805341	3300031942	Soil	MKQLLTITSVVVAIAALMLMAACQTIATNDAELAASKKEFLLAQ
Ga0306926_113229751	3300031954	Soil	MKQLLTLTSVVVAIAALMLMAACQTIATNDAELAASKKE
Ga0310810_113014071	3300033412	Soil	MKQLSTLANLVAATAALMLMAACQTVATNDAELAASRKEFLLAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096283

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences