Metagenome Family F096278

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096278
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	43 residues
Representative Sequence	MAAPGNSPIAIAFEGISGTGSIPTPVLLAGMLRASEKVSDLIFSPG
Number of Associated Samples	92
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.24 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	86.67 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (12.381 % of family members)
Environment Ontology (ENVO)	Unclassified (40.952 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.762 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.03% β-sheet: 21.62% Coil/Unstructured: 51.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13620	CarboxypepD_reg	15.24
PF13432	TPR_16	14.29
PF13414	TPR_11	4.76
PF06508	QueC	4.76
PF05635	23S_rRNA_IVP	3.81
PF13181	TPR_8	3.81
PF13424	TPR_12	3.81
PF07719	TPR_2	1.90
PF00515	TPR_1	1.90
PF12704	MacB_PCD	1.90
PF01128	IspD	0.95
PF04055	Radical_SAM	0.95
PF00330	Aconitase	0.95
PF01850	PIN	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	4.76
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	4.76
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	4.76
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	4.76
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	4.76
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	4.76
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	4.76
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	4.76
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	4.76
COG0746	Molybdopterin-guanine dinucleotide biosynthesis protein A	Coenzyme transport and metabolism [H]	0.95
COG1207	Bifunctional protein GlmU, N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	Lipid transport and metabolism [I]	0.95
COG2068	CTP:molybdopterin cytidylyltransferase MocA	Coenzyme transport and metabolism [H]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.57 %
Unclassified	root	N/A	11.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.57 %
Unclassified	root	N/A	11.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.57 %
Unclassified	root	N/A	11.43 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	85.71 %
Unclassified	root	N/A	11.43 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.19 %
Unclassified	root	N/A	11.43 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.24 %
Unclassified	root	N/A	11.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.24 %
Unclassified	root	N/A	11.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.43 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	9.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.43 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10147757	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300000567\|JGI12270J11330_10289320	Not Available	513	Open in IMG/M
3300000574\|JGI1357J11328_10092066	All Organisms → cellular organisms → Bacteria → Acidobacteria	977	Open in IMG/M
3300001356\|JGI12269J14319_10349124	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	521	Open in IMG/M
3300001593\|JGI12635J15846_10613033	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	632	Open in IMG/M
3300001593\|JGI12635J15846_10690164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	589	Open in IMG/M
3300002245\|JGIcombinedJ26739_100899266	Not Available	767	Open in IMG/M
3300005440\|Ga0070705_100341590	All Organisms → cellular organisms → Bacteria → Acidobacteria	1088	Open in IMG/M
3300005536\|Ga0070697_100281301	All Organisms → cellular organisms → Bacteria → Acidobacteria	1427	Open in IMG/M
3300005557\|Ga0066704_10737412	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300005944\|Ga0066788_10045707	Not Available	1024	Open in IMG/M
3300006059\|Ga0075017_101182284	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300006162\|Ga0075030_101575866	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300006174\|Ga0075014_100745488	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300006174\|Ga0075014_100928233	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300006354\|Ga0075021_10021599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3605	Open in IMG/M
3300009088\|Ga0099830_11836925	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300009143\|Ga0099792_10497261	All Organisms → cellular organisms → Bacteria → Acidobacteria	763	Open in IMG/M
3300009523\|Ga0116221_1067650	All Organisms → cellular organisms → Bacteria → Acidobacteria	1621	Open in IMG/M
3300009523\|Ga0116221_1164852	All Organisms → cellular organisms → Bacteria → Acidobacteria	963	Open in IMG/M
3300009525\|Ga0116220_10124295	All Organisms → cellular organisms → Bacteria → Acidobacteria	1101	Open in IMG/M
3300009525\|Ga0116220_10611963	Not Available	502	Open in IMG/M
3300009618\|Ga0116127_1126213	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300009624\|Ga0116105_1007606	All Organisms → cellular organisms → Bacteria → Acidobacteria	2202	Open in IMG/M
3300009637\|Ga0116118_1174097	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300009638\|Ga0116113_1036412	All Organisms → cellular organisms → Bacteria → Acidobacteria	1119	Open in IMG/M
3300009638\|Ga0116113_1093796	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300009641\|Ga0116120_1037348	All Organisms → cellular organisms → Bacteria → Acidobacteria	1706	Open in IMG/M
3300009683\|Ga0116224_10332740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300009759\|Ga0116101_1043597	Not Available	951	Open in IMG/M
3300009762\|Ga0116130_1198684	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300009792\|Ga0126374_11022730	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300009824\|Ga0116219_10226180	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300010379\|Ga0136449_103809427	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300012189\|Ga0137388_11145161	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300012189\|Ga0137388_11685352	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300012200\|Ga0137382_10129384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1695	Open in IMG/M
3300012353\|Ga0137367_10628915	All Organisms → cellular organisms → Bacteria → Acidobacteria	750	Open in IMG/M
3300012361\|Ga0137360_10588134	All Organisms → cellular organisms → Bacteria → Acidobacteria	952	Open in IMG/M
3300012362\|Ga0137361_11129998	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300012363\|Ga0137390_11944262	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300012683\|Ga0137398_10079644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2017	Open in IMG/M
3300012685\|Ga0137397_10889005	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300014154\|Ga0134075_10477564	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300014199\|Ga0181535_10558129	Not Available	659	Open in IMG/M
3300014494\|Ga0182017_10057182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2593	Open in IMG/M
3300014838\|Ga0182030_11261185	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300017822\|Ga0187802_10048994	All Organisms → cellular organisms → Bacteria → Acidobacteria	1541	Open in IMG/M
3300017933\|Ga0187801_10057803	All Organisms → cellular organisms → Bacteria → Acidobacteria	1419	Open in IMG/M
3300017933\|Ga0187801_10189292	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300017938\|Ga0187854_10015064	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4555	Open in IMG/M
3300017940\|Ga0187853_10161583	All Organisms → cellular organisms → Bacteria → Acidobacteria	1067	Open in IMG/M
3300017940\|Ga0187853_10462750	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300017995\|Ga0187816_10351175	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300017998\|Ga0187870_1072466	All Organisms → cellular organisms → Bacteria → Acidobacteria	1397	Open in IMG/M
3300018016\|Ga0187880_1358926	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300018022\|Ga0187864_10031010	All Organisms → cellular organisms → Bacteria	3163	Open in IMG/M
3300018033\|Ga0187867_10298847	All Organisms → cellular organisms → Bacteria → Acidobacteria	901	Open in IMG/M
3300018034\|Ga0187863_10009974	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6218	Open in IMG/M
3300018040\|Ga0187862_10130592	All Organisms → cellular organisms → Bacteria → Acidobacteria	1712	Open in IMG/M
3300018043\|Ga0187887_10895369	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300018043\|Ga0187887_10967161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300018057\|Ga0187858_10306747	All Organisms → cellular organisms → Bacteria → Acidobacteria	1005	Open in IMG/M
3300018057\|Ga0187858_10472812	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300018058\|Ga0187766_10715330	Not Available	693	Open in IMG/M
3300018090\|Ga0187770_11446481	Not Available	559	Open in IMG/M
3300020581\|Ga0210399_10101030	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2359	Open in IMG/M
3300021168\|Ga0210406_10840549	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300021181\|Ga0210388_11759523	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300021477\|Ga0210398_10034648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4214	Open in IMG/M
3300022521\|Ga0224541_1020145	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300023088\|Ga0224555_1154984	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300025475\|Ga0208478_1067005	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300025498\|Ga0208819_1020049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1853	Open in IMG/M
3300025553\|Ga0208080_1023557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2012	Open in IMG/M
3300025612\|Ga0208691_1151817	Not Available	522	Open in IMG/M
3300025812\|Ga0208457_1065521	Not Available	719	Open in IMG/M
3300025922\|Ga0207646_10273680	All Organisms → cellular organisms → Bacteria → Acidobacteria	1526	Open in IMG/M
3300026480\|Ga0257177_1016828	All Organisms → cellular organisms → Bacteria → Acidobacteria	1012	Open in IMG/M
3300026498\|Ga0257156_1033296	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045	Open in IMG/M
3300026499\|Ga0257181_1048816	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300027334\|Ga0209529_1071333	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300027505\|Ga0209218_1084469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300027610\|Ga0209528_1088932	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300027645\|Ga0209117_1034795	All Organisms → cellular organisms → Bacteria → Acidobacteria	1555	Open in IMG/M
3300027824\|Ga0209040_10509019	Not Available	533	Open in IMG/M
3300027854\|Ga0209517_10234044	All Organisms → cellular organisms → Bacteria → Acidobacteria	1110	Open in IMG/M
3300027854\|Ga0209517_10498956	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300027875\|Ga0209283_10173845	All Organisms → cellular organisms → Bacteria → Acidobacteria	1430	Open in IMG/M
3300027879\|Ga0209169_10198829	All Organisms → cellular organisms → Bacteria → Acidobacteria	1047	Open in IMG/M
3300027903\|Ga0209488_10212290	All Organisms → cellular organisms → Bacteria → Acidobacteria	1457	Open in IMG/M
3300027911\|Ga0209698_10086330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2652	Open in IMG/M
3300028649\|Ga0302162_10073653	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300028678\|Ga0302165_10005294	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3941	Open in IMG/M
3300028759\|Ga0302224_10322114	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300029907\|Ga0311329_10266205	All Organisms → cellular organisms → Bacteria → Acidobacteria	1265	Open in IMG/M
3300030014\|Ga0302175_10052831	All Organisms → cellular organisms → Bacteria → Acidobacteria	882	Open in IMG/M
3300030114\|Ga0311333_11483015	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300031258\|Ga0302318_10119706	All Organisms → cellular organisms → Bacteria → Acidobacteria	1199	Open in IMG/M
3300031446\|Ga0170820_14121920	All Organisms → cellular organisms → Bacteria → Acidobacteria	1036	Open in IMG/M
3300031708\|Ga0310686_107287500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1718	Open in IMG/M
3300031708\|Ga0310686_111577584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7322	Open in IMG/M
3300032805\|Ga0335078_11780934	Not Available	671	Open in IMG/M
3300032892\|Ga0335081_10120042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3845	Open in IMG/M
3300034091\|Ga0326724_0493541	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.76%
Aquatic	Environmental → Aquatic	35.24%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.24%
Freshwater	Environmental → Aquatic → Freshwater	29.52%
Peat	Environmental → Terrestrial → Peat	9.52%
Sediment	Environmental → Aquatic → Sediment	5.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.57%
Loam	Environmental → Terrestrial → Soil → Loam	10.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.71%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.29%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.90%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.95%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	12.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.38%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.43%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	10.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.81%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.90%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.95%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.95%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.95%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.95%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300025553	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028649	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_2	Environmental	Open in IMG/M
3300028678	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101477571	3300000567	Peatlands Soil	MAATGNSPIAIAFEGISGTDSIPTPVLLAGMLRTSEKVSDLMFSPG
JGI12270J11330_102893201	3300000567	Peatlands Soil	MAAPGNSPIAVAFEGISGTGSIPTPVLLAGMLRASEKVSDLIFSPGR
JGI1357J11328_100920661	3300000574	Groundwater	MAAPGSSPIAIAFEGMSGSGLVPTPVLLAGMLRASEKVSDLIFSP
JGI12269J14319_103491241	3300001356	Peatlands Soil	MAAPGNSPIAIAFDGISGTDSIPTPVLLAGMLRASEKVSDLIFSPGR
JGI12635J15846_106130331	3300001593	Forest Soil	MAAPGNSPISIAFEGISGTGSIPTSVLLAGMLRASEKVSDLIFSPGRPP
JGI12635J15846_106901641	3300001593	Forest Soil	MAAPGNSPIAIAFEGISGTDSIPTTVLLAGMLRTSEKVSDLMFSPGRPPQVE
JGIcombinedJ26739_1008992661	3300002245	Forest Soil	MAAPGNSPIAIAFEGLSGTGTGSIPTSALLAGMLRASEKVSDLI
Ga0070705_1003415901	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPGTSPIAIAFEGVSGSGLVPTPVLLAGMLRASEKVSDLIFS
Ga0070697_1002813011	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAAPGNSPIAIAFEGINGTGSIPTSVLLAGMLRASEKVRDLIFSPGR
Ga0066704_107374122	3300005557	Soil	MAAPGNSPIAIAFEGISGTGSIPTSVLLAGMLRASEKVSDLIFSPG
Ga0066788_100457071	3300005944	Soil	MAAPGVAPISISVEGFSGTGRAATPVLLGAMLRASEKVSDLIFSPG
Ga0075017_1011822842	3300006059	Watersheds	MAAPGNSPIAIAFEGLSGSGTIPTPILLAGMLRASEKVSDLIFSP
Ga0075030_1015758661	3300006162	Watersheds	MAAPGNSPIAIAFEGVSGTGSIPTPVLLAGMLRASEKVSDLIFSPG
Ga0075014_1007454882	3300006174	Watersheds	MAAPGNSPIAIAFEGLSASGTIPTPVLLAGMLRASEKV
Ga0075014_1009282331	3300006174	Watersheds	MAAPGNSPIAIAFEGLSGSGSIPTPVLLAGMLRASEKVSDL
Ga0075021_100215995	3300006354	Watersheds	MAAPGNSPIAIAFEGLSGSGSIPTSVLLAGMLRASEK
Ga0099830_118369251	3300009088	Vadose Zone Soil	MAAPGNSPIAITFEGISGTGSIPTSVLLAGMLRASEKVSDLIFSPGRPPQ
Ga0099792_104972611	3300009143	Vadose Zone Soil	MAAPGNSPIAIAFEGISGTGSIPTSALLAGMLRASEKVSDLIFSPGRPP
Ga0116221_10676501	3300009523	Peatlands Soil	MAAPGNSPIAIALEGISGTGLIPTSVLLAGMLRASEKVSDLIFSPGR
Ga0116221_11648522	3300009523	Peatlands Soil	MAAPGNSPIAIAFDGISGTDSIPTPVLLAGMLRASEKVSDLIFSPGRPP
Ga0116220_101242951	3300009525	Peatlands Soil	MQMAAPGNSPIAVAFEGISGTGSIPTPVLLAGMLRASEKV
Ga0116220_106119631	3300009525	Peatlands Soil	MAAPGNSPIAIAFDGISGTDSIPTPVLLAGMFRASERVSDLTFWPAGPPRAE
Ga0116127_11262132	3300009618	Peatland	MAAPGNSPIAIAFEGISGTGSIPTPVLLAGMLRASD
Ga0116105_10076061	3300009624	Peatland	MAAPGNSPISIAFEGISSTDAIPTPVLLAGMLRASDKVSDLIFSP
Ga0116118_11740971	3300009637	Peatland	MAATGNSPIAIAFEGVSGGDSIPTPVLLAGMLRTSEKVSDLMFSP
Ga0116113_10364121	3300009638	Peatland	MAAPGSSPIVSGGTGRTIPTPVLLAGMLRASEKISDLIF
Ga0116113_10937962	3300009638	Peatland	MAATGNSPIAIAFEGISGTDSIPTPVLLAGMLRTSEKVSDL
Ga0116120_10373481	3300009641	Peatland	MAAPGNSPIAIAFEGIIATGSIPTPVLLAGMLRAAYKVSDLIF
Ga0116224_103327402	3300009683	Peatlands Soil	MLMTGVYAMAAPGNSPIATAFEGISGTGSIPTPVLLAGMLRASEKVSDLIFSPGRPPQ
Ga0116101_10435971	3300009759	Peatland	MAAPGSSSTAIAFDGIGGTDSIPTSVLLAGMLRVSEKVSDLIFSPG
Ga0116130_11986842	3300009762	Peatland	VFEMAAPGSSSTAIAFDGIGGTDSIPTSVLLAGMLRVSEKVS
Ga0126374_110227301	3300009792	Tropical Forest Soil	MAAPGSSPIAVTFEGVGGSGTIPTPVLLAGMLRASEKVSDLIF
Ga0116219_102261801	3300009824	Peatlands Soil	MLMTGVYAMAAPGNSPIATAFEGISGTGSIPTPVLLAGMLRASEKVSDLIFSPG
Ga0136449_1038094271	3300010379	Peatlands Soil	MQMAAPGNSPIAVAFEGISGTGSIPTPVLLAGMLRASEKVSD
Ga0137388_111451612	3300012189	Vadose Zone Soil	MSAPGTSPIAIAFEGVSGSGLVPTPVLLAGMLRASEKVSDLIFSPGR
Ga0137388_116853521	3300012189	Vadose Zone Soil	MAAPGNSPIAITFEGVSGTGSIPTSVLLAGMLRASEKVSDLIFSP
Ga0137382_101293841	3300012200	Vadose Zone Soil	MAAPGSSPIAIAFEGVNGSGLIPTPVLLAGMLRASDKVSDLIFSPGR
Ga0137367_106289152	3300012353	Vadose Zone Soil	MAAPGNSPIAIAFEGLSGSGSIPTPVLLAGMLRASEKVSDLIFSP
Ga0137360_105881342	3300012361	Vadose Zone Soil	MAAPGNSPIAIAFEGISGTGSIPTPVLLAGMLRASEKVSDLTFSPGRPPQ
Ga0137361_111299982	3300012362	Vadose Zone Soil	MAAPGSSPIAIALEGVSSAGQVPTPVLLAAMLRAS
Ga0137390_119442621	3300012363	Vadose Zone Soil	MAAPGNSPIAIAFEGINGTGSIPTSVLLAGMLRASEKVSDLIFSP
Ga0137398_100796441	3300012683	Vadose Zone Soil	MAAPGSSPIAIALEGVSSTGHVPTPMLFVNILAATEKVSDLI
Ga0137397_108890052	3300012685	Vadose Zone Soil	MAAPGSSPIAIAFEGVAGSGLVPTPVLLSGMLRASE
Ga0134075_104775642	3300014154	Grasslands Soil	MSAPGTSPIAIAFEGVSGSGLVPTPVLLAGMLRASEKVSDLIFSPG
Ga0181535_105581292	3300014199	Bog	MAAPGNSPIGIAFEGVSGTGSIPTPVLLAGMLRASEKVSDLIFSPGRPP
Ga0182017_100571821	3300014494	Fen	MAAPGNSPIAIAFEGISGTGSIPTSILLAGMLRASDKV
Ga0182030_112611851	3300014838	Bog	MAAPGTSQIASAFEGISATDTIPTPVLLAGMLRTSEKVSDLMFSPGRPPQ
Ga0187802_100489942	3300017822	Freshwater Sediment	MAAPGNSPIAIAFEGVHGTGAIPTSVLLAGMLRASEKVSDLIFSPGRP
Ga0187801_100578032	3300017933	Freshwater Sediment	MAAPGNSPIAIAFEGISGTGSIPTPVLLAGMLRASEKVSDLIFSPGRP
Ga0187801_101892922	3300017933	Freshwater Sediment	MAAPGNSPIAIAFEGLSGSGSIPTPVLLAGMLRGSEKVSDLIFSPGRPP
Ga0187854_100150641	3300017938	Peatland	MAAPGNSPIAIAFEGISGTGSIPTPVLLAGMLRASEKVSDLI
Ga0187853_101615832	3300017940	Peatland	MAAPGNSPIAIAFEGISGTGSIPTPVLLAGMLRASEKVS
Ga0187853_104627501	3300017940	Peatland	MAAPGSASIAVSLEGASKAGSIPTPVLLAGMLRASEKVSDLI
Ga0187816_103511752	3300017995	Freshwater Sediment	MAAPGNSPIAIAFEGISGTGSIPTPVLLAGMLRASEKVSDLIFSPG
Ga0187870_10724661	3300017998	Peatland	MAAPGNSPIAIAFEGISATGSIPTPVLLAGMLRASDKVSDLIFSPGRP
Ga0187880_13589262	3300018016	Peatland	MAAPGNSPIAIAFEGISGTDSIPTPVLLAGMLRTSEKVSDLMFSP
Ga0187864_100310105	3300018022	Peatland	MAATGNSPIAIAFEGISGTGSIPTPVLLAGMLRASDKVSDLIFSP
Ga0187867_102988472	3300018033	Peatland	MAATGNSPIAIAFEGISGTDSIPTPVLLAGMLRTSEKVS
Ga0187863_100099741	3300018034	Peatland	MAAPGSSSTAIAFDGIGGTDSIPTSVLLAGMLRVSEKVSDLIFSP
Ga0187862_101305921	3300018040	Peatland	MLMTGVHEMAAPGNSPIAIAFEGISETGSIPTPVLLAGMLRASEKVSDLIFSPG
Ga0187887_108953692	3300018043	Peatland	MAAPGNSPIAIAFEGVSGTGSIPTSVLLAGMLRASEKVS
Ga0187887_109671611	3300018043	Peatland	MAAPGNSPIAIGFDGLNGKDAIPTPGLLAGMLRASEKVSDLIFSPGRPPQV
Ga0187858_103067472	3300018057	Peatland	MAAPGNSPIAIAFEGISGTGSIPTPVLLAGMLRASDKVSDLIFS
Ga0187858_104728122	3300018057	Peatland	MAAPGNSPIAIAFEGISGTGSIPTPVLLAGMLRASDKVSDLIF
Ga0187766_107153303	3300018058	Tropical Peatland	MAAPGNSPIAIALEGASGSELVPTPILLAGMLRASEKVSDLIFSPGRP
Ga0187770_114464811	3300018090	Tropical Peatland	MAAPGNSPISIAFEGINGTASIPTSVLLAGMLRASDQVSDLIFSPGRPP
Ga0210399_101010303	3300020581	Soil	MAAPGNSPISIAFDGISGTGSIPTSVLLAGMLRASEKVSD
Ga0210406_108405491	3300021168	Soil	MAAPGNSPIAIAFEGISGTGSIPTSVLLAGMLRASEKVSDLI
Ga0210388_117595231	3300021181	Soil	MAAPGNSPIAIAFEGISGTGAIPTSVLLAGMLRASE
Ga0210398_100346485	3300021477	Soil	MAAPGNSPIAIAFEGLSGTGAIPTSVLLAGMLRASDK
Ga0224541_10201452	3300022521	Soil	MAAPGNSPIAIAFEGINGTGSIPTSVLLAGMLRASEKVSDLIFSPGRPP
Ga0224555_11549841	3300023088	Soil	MAAPGNSPIAIAFEGISGTGSIPTPVLLAGMLRASDKVSDLI
Ga0208478_10670051	3300025475	Arctic Peat Soil	MAAPGNSPIAIAFEGISGTGSIPTPVLLAGMLRASEKVSDLIFSPGRPP
Ga0208819_10200491	3300025498	Peatland	MAAPGNSPIAIAFEGISATGSIPTPVLLAGMLRAS
Ga0208080_10235571	3300025553	Arctic Peat Soil	MAAPGNSPIAIAFEGISGTGSIPTSVLLAGMLRASE
Ga0208691_11518172	3300025612	Peatland	MAATGNSPIAIAFEGISGTDSIPTPVLLAGMLRTSEKVSDLMFSPGRP
Ga0208457_10655211	3300025812	Peatland	MAAPGNSPIAIAFEGISGTGSVPTPVLLAGMLRASEKVSDLI
Ga0207646_102736802	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAAPGNSPIAIAFEGISGTGSIPTSVLLAGMLRASEKVSDLIF
Ga0257177_10168282	3300026480	Soil	MAAPGNSPIAIAFEGINGTGSIPTSVLLAGMLRASEKVSDLIFSPG
Ga0257156_10332961	3300026498	Soil	MAAPGSSPIAIAFEGVSGSGLIPTPVLLAGMLRASEKV
Ga0257181_10488161	3300026499	Soil	MAAPGNSPIAIAFEGISGTGSIPTSVLLAGMLRASEKVSDLIFSPGRPPQ
Ga0209529_10713331	3300027334	Forest Soil	MAAPGNSPIAIAFEGISSTDAIPTPVLLAGMLRASEKVSDLIFSPG
Ga0209218_10844691	3300027505	Forest Soil	MAAPGNSTISIPFEGVTERGSMPTSVLLAGMLRSSLKVSDLIFSPN
Ga0209528_10889322	3300027610	Forest Soil	MAAPGNSPIAITFEGISGTGSIPTPVLLAGMLRASEKVSDLIFSPGR
Ga0209117_10347951	3300027645	Forest Soil	MAAPGNSPIAIAFDGISGTGSIPTPVLLAGMLRASEKV
Ga0209040_105090192	3300027824	Bog Forest Soil	MAATGNSPIAIAFEGVSGTDSIPTPVLLAGMLRTSEKVSDLMF
Ga0209517_102340442	3300027854	Peatlands Soil	MAATGNSPIAIAFEGISGTDSIPTPVLLAGMLRTSEKVSDLMFSPGRPP
Ga0209517_104989562	3300027854	Peatlands Soil	MAAPGNSPIAIAFEGVSGTGSIPTPVLLAGMLRASEKVSDL
Ga0209283_101738451	3300027875	Vadose Zone Soil	MAAPGNSPIAIAFEGINGTGSIPTSVLLAGMLRASEKV
Ga0209169_101988291	3300027879	Soil	MAAPGNSPIAIAFEGISGTDSIPTTVLLAGMLRTSEKVSD
Ga0209488_102122901	3300027903	Vadose Zone Soil	MAAPGSSPIAIALEGVSSAGQVPTPVLLAAMLRASEQVSD
Ga0209698_100863301	3300027911	Watersheds	MAAPGNSPIAIAFDGISGTGSIPTSVLLAGMLRAS
Ga0302162_100736531	3300028649	Fen	MAAPGNSPIAIAFEGVSGTGSIPTSVLLAGMLRASDKVSDLIFSPGRP
Ga0302165_100052941	3300028678	Fen	MAAPGNSPIAIAFEGVSGTGSIPTSVLLAGMLRASDKVSDLIFSPG
Ga0302224_103221141	3300028759	Palsa	MAAPGNSSVAIAFDGAGGLGSISTSVLLSGMLRSS
Ga0311329_102662052	3300029907	Bog	MAAPGSSPIAIAFEGINGTGSISTSVLLAGMLRASEKVSD
Ga0302175_100528312	3300030014	Fen	MAAPGNSPIAIAFEGVSGTGSIPTSVLLAGMLRASDK
Ga0311333_114830151	3300030114	Fen	MAAPGNSPIAIAFEGISGTGSIPTQALLSGMLRASEK
Ga0302318_101197061	3300031258	Bog	MAAPGSSPIAIAFEGINGTGSISTSVLLAGMLRAS
Ga0170820_141219201	3300031446	Forest Soil	MAATGSSPIAINFEGISGTGAIPTAVLLGGMLRVSDK
Ga0310686_1072875001	3300031708	Soil	MASPGNSTVSIPFGGVTSRGTIPTSVLLAGMLRTSQKVSDLIFSPNRPPQVEIHG
Ga0310686_1115775841	3300031708	Soil	MAAPGNSPIAIAFEGLSGTGTGEIPTSVLLAGMLRASDKVSDL
Ga0335078_117809341	3300032805	Soil	MAAPGNSTISVPFEGVTGRGTVPTSILLAAMLRTSQK
Ga0335081_101200425	3300032892	Soil	MAAPGSSPAIFEGVNGTGSIPTPVLLSAMLRASEKVS
Ga0326724_0493541_470_628	3300034091	Peat Soil	MPINGVYGMAAPGNSPIAIAFEGISGTGSIPTQQLLAGMLRASEKVSDLIFSP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096278

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences