Metagenome / Metatranscriptome Family F096277

Basic Information
Family ID	F096277
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	83 residues
Representative Sequence	QAGESVVRWSGDGRYLFLQQREPFSIKISRLEVATRRKEPWRVVKVPEPGAGFFGPLALSADGKACASTFQHDLANLFLVQGLK
Number of Associated Samples	93
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.10 %
% of genes near scaffold ends (potentially truncated)	88.57 %
% of genes from short scaffolds (< 2000 bps)	83.81 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Most Common Taxonomy
Group	Bacteria (91.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.048 % of family members)
Environment Ontology (ENVO)	Unclassified (25.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.667 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 31.25% Coil/Unstructured: 68.75%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF02954	HTH_8	26.67
PF16697	Yop-YscD_cpl	2.86
PF00498	FHA	2.86
PF02781	G6PD_C	2.86
PF13185	GAF_2	1.90
PF13924	Lipocalin_5	1.90
PF13492	GAF_3	1.90
PF01590	GAF	1.90
PF03060	NMO	1.90
PF05117	DUF695	1.90
PF01042	Ribonuc_L-PSP	0.95
PF12833	HTH_18	0.95
PF03544	TonB_C	0.95
PF00182	Glyco_hydro_19	0.95
PF00158	Sigma54_activat	0.95
PF13181	TPR_8	0.95
PF13751	DDE_Tnp_1_6	0.95
PF02518	HATPase_c	0.95
PF03162	Y_phosphatase2	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	2.86
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	1.90
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	1.90
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.95
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.95
COG2365	Protein tyrosine/serine phosphatase Oca4	Signal transduction mechanisms [T]	0.95
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	0.95
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.43 %
Unclassified	root	N/A	8.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.43 %
Unclassified	root	N/A	8.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.43 %
Unclassified	root	N/A	8.57 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	79.05 %
Unclassified	root	N/A	8.57 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.43 %
Unclassified	root	N/A	8.57 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.48 %
Unclassified	root	N/A	8.57 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.71 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.48 %
Unclassified	root	N/A	8.57 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.71 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.48 %
Unclassified	root	N/A	8.57 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.95 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.95 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.48 %
Unclassified	root	N/A	8.57 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.95 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.95 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0276609	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300001356\|JGI12269J14319_10358201	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300002560\|JGI25383J37093_10010021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3094	Open in IMG/M
3300004082\|Ga0062384_100649112	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300004091\|Ga0062387_100521444	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300004092\|Ga0062389_101559032	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300004635\|Ga0062388_100974898	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005332\|Ga0066388_102937910	Not Available	871	Open in IMG/M
3300005332\|Ga0066388_106252068	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300005554\|Ga0066661_10179811	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1304	Open in IMG/M
3300005555\|Ga0066692_10675279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	642	Open in IMG/M
3300005614\|Ga0068856_101855434	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300005921\|Ga0070766_11282826	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300006052\|Ga0075029_100487211	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300006059\|Ga0075017_101119665	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300006162\|Ga0075030_101543096	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300006174\|Ga0075014_100276284	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300006174\|Ga0075014_100357307	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300006358\|Ga0068871_100494861	All Organisms → cellular organisms → Bacteria → Acidobacteria	1101	Open in IMG/M
3300006797\|Ga0066659_11164241	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	644	Open in IMG/M
3300009523\|Ga0116221_1423913	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300009665\|Ga0116135_1124714	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300009700\|Ga0116217_10746135	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300010361\|Ga0126378_12405103	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300010366\|Ga0126379_10712104	Not Available	1098	Open in IMG/M
3300010379\|Ga0136449_100660730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	1764	Open in IMG/M
3300010937\|Ga0137776_1277106	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300012208\|Ga0137376_10998248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300012361\|Ga0137360_10656005	All Organisms → cellular organisms → Bacteria → Acidobacteria	900	Open in IMG/M
3300012944\|Ga0137410_10867463	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300012984\|Ga0164309_11277331	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300013297\|Ga0157378_11110589	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300014969\|Ga0157376_11200956	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300015371\|Ga0132258_13987810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1002	Open in IMG/M
3300016750\|Ga0181505_10047824	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300017823\|Ga0187818_10347074	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300017940\|Ga0187853_10148824	All Organisms → cellular organisms → Bacteria → Acidobacteria	1122	Open in IMG/M
3300017943\|Ga0187819_10185397	All Organisms → cellular organisms → Bacteria → Acidobacteria	1231	Open in IMG/M
3300017946\|Ga0187879_10308647	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300017970\|Ga0187783_10753109	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300018043\|Ga0187887_10522937	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300018046\|Ga0187851_10611021	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300018468\|Ga0066662_11013557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300020199\|Ga0179592_10274810	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300020579\|Ga0210407_10630629	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300020580\|Ga0210403_11290893	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300021171\|Ga0210405_11105401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300021171\|Ga0210405_11120386	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300021180\|Ga0210396_10046264	All Organisms → cellular organisms → Bacteria → Acidobacteria	3994	Open in IMG/M
3300021420\|Ga0210394_10388344	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300021420\|Ga0210394_11856510	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300021474\|Ga0210390_10002983	All Organisms → cellular organisms → Bacteria	14669	Open in IMG/M
3300021478\|Ga0210402_10914175	All Organisms → cellular organisms → Bacteria → Acidobacteria	804	Open in IMG/M
3300022528\|Ga0242669_1004429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1554	Open in IMG/M
3300022533\|Ga0242662_10009277	All Organisms → cellular organisms → Bacteria → Acidobacteria	1944	Open in IMG/M
3300022724\|Ga0242665_10090515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300022724\|Ga0242665_10144238	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300022872\|Ga0224526_1027832	All Organisms → cellular organisms → Bacteria → Acidobacteria	1231	Open in IMG/M
3300022875\|Ga0224553_1035943	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300025916\|Ga0207663_10043509	All Organisms → cellular organisms → Bacteria	2750	Open in IMG/M
3300026333\|Ga0209158_1157045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300026359\|Ga0257163_1089462	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300026530\|Ga0209807_1348269	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300027803\|Ga0209910_10005548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300027829\|Ga0209773_10311110	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300027842\|Ga0209580_10512195	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300027869\|Ga0209579_10031772	All Organisms → cellular organisms → Bacteria → Acidobacteria	2878	Open in IMG/M
3300028566\|Ga0302147_10017520	All Organisms → cellular organisms → Bacteria → Acidobacteria	2644	Open in IMG/M
3300029903\|Ga0247271_103643	All Organisms → cellular organisms → Bacteria → Acidobacteria	3077	Open in IMG/M
3300030011\|Ga0302270_10126476	All Organisms → cellular organisms → Bacteria → Acidobacteria	1567	Open in IMG/M
3300030706\|Ga0310039_10217265	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300030740\|Ga0265460_11271891	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300030849\|Ga0075393_10003673	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300030917\|Ga0075382_10007253	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300030967\|Ga0075399_10019846	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300030973\|Ga0075395_11453712	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300031122\|Ga0170822_11690191	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300031122\|Ga0170822_11897618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300031234\|Ga0302325_10918643	All Organisms → cellular organisms → Bacteria → Acidobacteria	1211	Open in IMG/M
3300031258\|Ga0302318_10009450	All Organisms → cellular organisms → Bacteria → Acidobacteria	2876	Open in IMG/M
3300031446\|Ga0170820_12728703	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300031474\|Ga0170818_115027531	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300031708\|Ga0310686_102081318	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300031715\|Ga0307476_10320591	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300031715\|Ga0307476_10452508	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300031715\|Ga0307476_11285446	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300031753\|Ga0307477_11069950	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300031754\|Ga0307475_11002292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300031823\|Ga0307478_10278026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1366	Open in IMG/M
3300031823\|Ga0307478_10471368	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045	Open in IMG/M
3300031823\|Ga0307478_11108249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300032180\|Ga0307471_101855147	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300032783\|Ga0335079_10081006	All Organisms → cellular organisms → Bacteria → Acidobacteria	3689	Open in IMG/M
3300032805\|Ga0335078_10024720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8910	Open in IMG/M
3300032805\|Ga0335078_11776540	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300032893\|Ga0335069_10550714	All Organisms → cellular organisms → Bacteria → Acidobacteria	1330	Open in IMG/M
3300032955\|Ga0335076_11102854	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300033004\|Ga0335084_10215387	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.24%
Host-Associated	Host-Associated	4.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.24%
Aquatic	Environmental → Aquatic	20.00%
Plants	Host-Associated → Plants	4.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.52%
Freshwater	Environmental → Aquatic → Freshwater	14.29%
Peat	Environmental → Terrestrial → Peat	5.71%
Sediment	Environmental → Aquatic → Sediment	4.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.90%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.95%
Roots	Host-Associated → Plants → Roots	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.76%
Loam	Environmental → Terrestrial → Soil → Loam	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.90%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.95%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.14%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.95%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.95%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.05%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.86%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.95%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.95%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.95%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300022875	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 10-14	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300027803	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3S	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030849	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_02766091	2228664022	Soil	VRWSGDGRCLFLQQREPGSIRISRLEIATHRKEPWFVVKAPEPGAQFFGPLALSADGKASAATFQRDLANLFLV
JGI12269J14319_103582011	3300001356	Peatlands Soil	VVRWSGDGRYLFLQQREPTSIKISRFDVTTRRKEPWLVVKVPEPGAQFLGPLALSADGKAYAATFQRDLANLFLVRGLK*
JGI25383J37093_100100211	3300002560	Grasslands Soil	AHKLSLGDISGGSPRTISDLQSGETVVRWGGDGRYLFLRQLEGDTIRVSRLDVSTRRKEPWRVLKVPEPGAEFFGPLALSADGKAYACSFQRDLANLYLVKGLR*
Ga0062384_1006491121	3300004082	Bog Forest Soil	RWSGDGRYLFLQQREPSSIKISRLEIATRRKEPWRVVKVPEPGAGFFGPLALSADGKACASTFQHDLANLFLVQGLK*
Ga0062387_1005214442	3300004091	Bog Forest Soil	QAGESVVRWSGDGRYLFLQQREPFSIKISRLEVATRRKEPWRVVKVPEPGAGFFGPLALSADGKACASTFQHDLANLFLVQGLK*
Ga0062389_1015590321	3300004092	Bog Forest Soil	WSGDGRYIFLQRPEADTVKLIRLEVASGKREPWRTLKAPEPGAQIIEEVALSADGKECAFSFQHDLANLYLVRGLQ*
Ga0062388_1009748981	3300004635	Bog Forest Soil	IFLQRPEADTVKLIRLEVASGKREPWRTLKAPEPGAQIIEEVALSADGKECAFSFQHDLANLYLVRGLQ*
Ga0066388_1029379101	3300005332	Tropical Forest Soil	AVRWSGDGRYLFLQQREASSIKISRLEFATHRREPWLVVKVPEPGATFLGPLALSADGKACATTFQRDLANLFLVRGLK*
Ga0066388_1062520681	3300005332	Tropical Forest Soil	SKMIADLNGESVVRWSADGRTLFLQQREATSIKISRLDVATHRKEPWLVVKVPEPGATFMGPVALSADGKACATTFQRDLANLFLVRGLK*
Ga0070713_1014296471	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RYLFLQQREPASIKISRLEIATHRREPWRGIKAPEPGAQFFGPLALSADGKACATTFQHDLANLFLVRGLK*
Ga0066661_101798113	3300005554	Soil	PRTISDLQSGETVVRWSGDGRYLFLRQLEGDTIRVSRLDALTRRKEPWRVLKVPEPGAEFFGPLALSADGKAYACSFQRDLANLYLVKGLR*
Ga0066692_106752791	3300005555	Soil	PRTISDLQSGETVVRWSGDGRYLFLRQLEGDTIRVSRLDASTRRKEPWRVLKVPEPGAEFFGPLALSADGKAYACSFQRDLANLYLVKGLR*
Ga0068856_1018554341	3300005614	Corn Rhizosphere	GGGESKTVMDLQPGESVVRWSGDGRYLFLQQKEATSIKISRLEISTHRKEPWLVVKVPEPEAAFFGPLALSADGKACATTFQRDLANLFLVRGLK*
Ga0070766_112828261	3300005921	Soil	LTPVGGGNSKTVVDLQTGESVVRWSGDGRYLFLQQREPTGIRISRLEVATQRKEPWIVVKVPEPGAQFFGPLALSADGKACAATFQRDLANLFLVRGLK*
Ga0075029_1004872111	3300006052	Watersheds	DTKNIADLQPGESVVRWSGDGRYLFLQQREPSSIKISRLDVATRRKEPWLIVKAPEPGAQFLGPVALSADGKACAATFQRDLANLFLVSGLK*
Ga0075017_1011196651	3300006059	Watersheds	AVRWSGDGRYLFLRQPEGDTIQINRLDVATGHKEPWRTLKVPEPGAEFIGALALSADGKACAFSFQHDLANLYLIKGLK*
Ga0075030_1015430963	3300006162	Watersheds	DGRYLFLQQREQSNIKISRFELATHRQEPWLIVRVPEPGAEFRGPLALSADGKVCASTFQHDLANLFLVKGLK*
Ga0075014_1002762841	3300006174	Watersheds	RYLFLQQREPSSIKISRLEVATHRQEPWLVVRVPEPGAVFLGPLALSADGKSCASTFQHDLANLFLVKGLK*
Ga0075014_1003573072	3300006174	Watersheds	IAELQNGEGAVRWSGDGRYLFLRQPEGDTIQINRLDVATGHKEPWRTLKVPEPGAEFIGALALSADGKACAFSFQHDLANLYLIKGLK*
Ga0068871_1004948611	3300006358	Miscanthus Rhizosphere	KTIVDLQGESAVRWSVDGRYLFLQQREPTSMKISRLDLSTRRKEPWLVLKVPEPGAQFLGPLALSADGKACATTFQRDLANLFLVRGLK*
Ga0066659_111642411	3300006797	Soil	SGGSPRTISDLQSGETVVRWSGDGRYLFLRQLEGDTIRVSRLDASTRRKEPWRVLKVPEPGAEFFGPLALSADGKAYACSFQRDLANLYLVKGLR*
Ga0116221_14239132	3300009523	Peatlands Soil	WSADGRYLFLQQREPTSIKISRLDMTTRRKEPWLVVKVPEPGAQFLGPLALSADGKAYAATFQRDLANLFLVRGLK*
Ga0116135_11247141	3300009665	Peatland	RAGAARGYLSLRQAGGGAGKISRVEVGTGHREPWQTLKVPEPGAVFLGILGLSADGKACAFTFQHDLANLYLVKGLK*
Ga0116217_107461352	3300009700	Peatlands Soil	IGEAVVRWSGDGRYLFLRQGEGDTVKISRLDVATGHREPWRTVKVPEPGAEFVGALALSADGKACAFSFQHDLANLYLVKGLK*
Ga0116219_104215491	3300009824	Peatlands Soil	RYLFLQQREPTSIKISRLDMTTRRKEPWLVVKVPEPGAQFLGPLALSADGKAYAATFQRDLANLFLVRGLK*
Ga0126378_124051031	3300010361	Tropical Forest Soil	WSGDGRYLFLQQREPTSIKISRLDLATQRKEPWLVVKAPEPGATFLGPVALSADGKACATTFQRDLANLFLVRSLK*
Ga0126379_107121042	3300010366	Tropical Forest Soil	VRWSGDGRYLFLQQREASSIKIGRLEFATHRKEPWLVVKVPEPGATFLGPLALSADGKACATTFQRDLANLFLVRGLK*
Ga0136449_1006607303	3300010379	Peatlands Soil	ESVVRWSGDGRYLFLQQREPTSIKISRLDVTPRRKEPWLVVKVPEPGAQFLGPLALSADGKAYAATFQRDLANLFLVRGLK*
Ga0137776_12771062	3300010937	Sediment	LQPGESAVRWSADGRYLFLQQREPPSIKISRLELASHSKQPWLVVKVPEPGATFFGPLALSADGKACATTFQRDLANLFLVRGLK*
Ga0137376_109982482	3300012208	Vadose Zone Soil	GDGRYLFLQQREPAGIKISRLEIATHRKEPWLVVKSPEPGAQFFGPLALSADGKACGATFQRDLANLFLVRGLK*
Ga0137360_106560052	3300012361	Vadose Zone Soil	WSGDGRYLFLRQPEGETIKISRLEIATGRKEPWQTLKGPEPGAEFIGALALSPDGKACAFTFQHDLANLYLVTGLE*
Ga0137410_108674632	3300012944	Vadose Zone Soil	GDGRYLFLQQREPGSIRISRLDIATHRKEPWLVVKAPEPGAQFFGPLALSADGKACAATFQRDLANLFLVRGLK*
Ga0126369_123030781	3300012971	Tropical Forest Soil	RYLFMQQRDAGSIKISRMEIATHRKEPWLMVKVPEPGATFIGPLALSADGKACATTFQRDLANLFLVRGLK*
Ga0164309_112773311	3300012984	Soil	ESKTVMDLQPNESVVHWSNDERYLFLQQKEATSIKISRLEISTHRKEPWLVVKVPEPGAAFFGPLALSADGKACATTFQRDLANLFLVRGLK*
Ga0157378_111105891	3300013297	Miscanthus Rhizosphere	GESAVRWSVDGRYLFLQQREPTSMKISRLDLSTRRKEPWLVLKVPEPGAQFLGPLALSADGKACATTFQRDLANLFLVRGLK*
Ga0157376_112009561	3300014969	Miscanthus Rhizosphere	KTIVDLQGESAVRWSVDGWYLFLQQRESTSMKISRLDLSTRRKEPWLVLKVPEPGAQFLGPLALSADGKACATTFQRDLANLFLVRGLK*
Ga0132258_139878102	3300015371	Arabidopsis Rhizosphere	VGGGDSKTIVELQGESVVRWSGDGRYLFLQQREPASIKISRLDVTTRRKEPWLVVKVPEPGAQLLGPLALSADGKSYAITFQRDLANLFLVRGLK*
Ga0181505_100478241	3300016750	Peatland	ESVVRWSGDGRYLFLQQREPASIKISRLELSTGRKEPWLVVKAPEPGAQLFGPLALSADGKAYATTFQRDLANLFLVRGLR
Ga0187802_102999801	3300017822	Freshwater Sediment	YLFLQQREPASIKISRLDVTTRRKEPWLVVKVPEPGAQFLGPVALSADGKSCATTFQRDLANLFLVRGLK
Ga0187818_103470742	3300017823	Freshwater Sediment	GGGESKTIVDLQPGENVVRWSGDGRYLFLQQREPSSIKISRLEVATRRREPWLVLRVPGPGATFFGPLALSADGKSCASTFQHDLANLFLVKGLK
Ga0187853_101488241	3300017940	Peatland	ETVVRWSGDGRYLFLRQPEGDAIKISRLDVATGHKEPWRTLKVPEPGAVFVGVVALSADGKACAFSFQHDLANLYLVTGLK
Ga0187819_101853973	3300017943	Freshwater Sediment	VVRWSGDGRYLFLQQREPTSIKISRLELATHRKEPWLTVKVPEPGAQLFGPLALSADGKACASTFQR
Ga0187879_103086471	3300017946	Peatland	ADGRYLFLRQPEGDTTRISRLDVANGQEAPWQTLKVPEPGAVSIGALALSADGKTCAFSFQHDLANLYLVKGLK
Ga0187783_107531091	3300017970	Tropical Peatland	GDSKTLADLQSGESVIRWSGDGRYLFLQQREPASIKITRFELATRRREPWLVVKAPEPGAQFLGTLTLSANGKACAVTFQRDLANLFLVTGLK
Ga0187855_104720081	3300018038	Peatland	QPEGDTIKLSRFDIDTGKKEPWQTLKAHEPGAQFIGALGLSADGKICAFSFQHDLANLYLVKGLK
Ga0187887_105229371	3300018043	Peatland	ISELQDGEAVVRWSGDGSHLFLKRPEGETLKLSRLDVATGHKEPWKTVQAPEPGAEFLGDLALSADGKACAFSFQHDLANLFLVKGLK
Ga0187851_106110212	3300018046	Peatland	GVVRWSGDAKHLFLQQPEEDTIKLSRLDIDTGKKEPWQTLKAPEPGAEFIGAPGLSSDGKICAFSFQHDLANFNLVKGLK
Ga0066662_110135571	3300018468	Grasslands Soil	PPRTISDLQSGETVVRWSGDGRYLFLRQLEGDTIRVSRLDASTRRKEPWRVLKVPEPGAEFFGPLALSADGKAYACSFQRDLANLYLVKGLR
Ga0179592_102748101	3300020199	Vadose Zone Soil	GRYLFLRQPEGETIKISRLDIATGRKEPWQTLKVPEPGAEFVGALALSPDGRACAFTFQHDLANLYLVTGLE
Ga0210407_106306291	3300020579	Soil	QPGESVVRWSGDGRYLFLQQREPASIKISRLDVTTHRTEPWLVVKVPEPGAQFLGPLALSADGKAYAATFQRDLANLFLVRGLK
Ga0210403_112908932	3300020580	Soil	GDSKTVVDLDGGESIVRWSGDDRYIFLQQREPGSIKVSRLDVTTGRKEPWLVVKVPEPGAQFFGPLALSADGKSYATTFQRDLANLFLVRGLK
Ga0210405_111054011	3300021171	Soil	VVDLQTGESVVRWSGDGRYLFLQQREPTGIRISRLEVATQRKEPWIVVKVPEPGAQFFGPLALSADGKACAATFQRDLANLFLVRGLK
Ga0210405_111203861	3300021171	Soil	GHHLFLQNPEGATIKISRLDLATGHKEPWQTLKVPEPGAEFIGAFALSADGKACAFSFQHDLANLYLVKGLR
Ga0210396_100462643	3300021180	Soil	DLQTGESVARWSGDGRYLFLQQREAAGIKISRLEIATRRKETWLVVKVPEPGAQFFGPLALSADGKACAATFQRDLANLFLVRGLK
Ga0210386_116461161	3300021406	Soil	YLFLQQREPGSIKISRLDLTTRHKEPWLVVKVPEPGAQFFGPLALSADGKSYATTFQRDLANLFLVRGLK
Ga0210394_103883442	3300021420	Soil	ESRTVADLQGESVVRWSADGRYVFLQQREPASIKISRLDITSRRKEPWLVVKVPEPGAQFLGPLALSADGKACATTFQRDLANLFLVRGLK
Ga0210394_118565101	3300021420	Soil	SPRSISPLQNGEAVVRWSGDGRYLFLQQPEGDTIKISRLEVATGHKELWQTLKVPEPGAEFIGALALSADGKAGAFSFQHDLANLYLVRGLK
Ga0210390_100029831	3300021474	Soil	DGGESIVRWSGDDRYIFLQQREPGSIKVSRLDVTTGRKEPWLVVKVPEPGAQFFGPLALSADGKSYATTFQRDLANLFLVRGLK
Ga0210402_109141752	3300021478	Soil	KTIVDLQPGESVVRWSGDGRYLFLQQREPASIKISRLDVTTRRQEPWLVVKVPEPGAQFLGPLALSADGKAYAATFQRDLANLFLVRGLK
Ga0242669_10044291	3300022528	Soil	GRYLFLQQREAAGIKISRLEIATHRKEPWLVVKAPEPGAQFFGPLALSADGKACAATFQRDLANLFLVRGLK
Ga0242662_100092773	3300022533	Soil	NSKTVIDLQGGESVVRWSGDGRYLFLQQREPAGIKISRLEIATHRKEPWLVVKSPEPGAQFFGPLALSADGKACAATFQRDLANLFLVRGLK
Ga0242665_100905152	3300022724	Soil	ESVARWSGDGRYLFLQQREAAGIKISRLEIATRRKETWLVVKVPEPGAQFFGPLALSADGKACAATFQRDLANLFLVRGLK
Ga0242665_101442381	3300022724	Soil	IVDLQPGESVVRWSSDGRYLFLQQREPASIKISSLDVTTHRTEPWLVVKVPEPGAQFLGPLALSADGKAYAATFQRDLANLFLVRGLK
Ga0224526_10278322	3300022872	Soil	IAGGRPRTVGELQNGETVVRWSGDGRYLFLRQPEGDAIKISRLDVATGHKEPWRTLKVPEPGAVFVGVVALSADGKACAFSFQHDLANLYLVTGLK
Ga0224553_10359432	3300022875	Soil	ELQNGETVVRWSGDGRYLFLRQPEGDAIKISRLDVATGHKEPWRTLKVPEPGAVFVGVVALSADGKACAFSFQHDLANLYLVTGLK
Ga0207663_100435093	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTPVGGGESKTVMDLQPGESVVRWSGDGRYLFLQQKEAASIKISRLEISTHRKEPWLVVKVPEPGAAFFGPLALSADGKACATTFQRDLANLFLVRGLK
Ga0209158_11570453	3300026333	Soil	LQSGETVVRWSGDGRYLFLRQLEGDTIRVSRLDALTRRKEPWRVLKVPEPGAEFFGPLALSADGKAYACSFQRDLANLYLVKGLR
Ga0257163_10894621	3300026359	Soil	VVRWSGDGRYLFLRQPEGETIKISRLDIATGRKQPWQTLRVPEPGAEFIGALALSPDGRACAFSFQHDLANLYLVTGLE
Ga0209807_13482692	3300026530	Soil	STIAELLNGESVVRWSGDGRYIFLQQREPASIKISRLEVATHRKEPWLVVKVPEPGAQFLGPLALSADGKTCATTFQRDLANLFLVRGLK
Ga0209910_100055482	3300027803	Thawing Permafrost	AGGTPRTVGELQNGETVVRWSGDGRYLFLRQPEGDAIKISRLDVATGHKEPWRTLKVPEPGAVFVGVVALSADGKACAFSFQHDLANLYLVTGLK
Ga0209773_103111102	3300027829	Bog Forest Soil	VRWSADGRYLFLQQPEADTIKISRLEVATGHKEPWQTLKVPEPGAGFIGALALSGDGKACAFSFQHDLANLYLVRGLK
Ga0209580_105121951	3300027842	Surface Soil	GGEPKTIADLQNGEKVVRWSGDGRYLFLQQREPSNIKIRRLEVSTHRQEPWLVVKVPEPGAEFFGPLALSADGRACASTFQHDLANLFLVRGLK
Ga0209579_100317722	3300027869	Surface Soil	VRWSGDGGHLFLKRPEGDTIQLSRLDVASGHKEPWKTVKVPEPGAEFIGDIALSADGTACAFSFQHDLANLFLVRGLK
Ga0302147_100175202	3300028566	Bog	GTPRTVGELQNGETVVRWSGDGRYLFLRQPEGDAIKISRLDVATGHKEPWRTLKVPEPGAVFVGVVALSADGKACAFSFQHDLANLYLVTGLK
Ga0247271_1036434	3300029903	Soil	VVRYSGDGRYLFLRQPEADTLQITRLDVANSHKEPWRTLKVPEPGAEFIGVLAISADGKECAFSFQHDLANLYLVKGLK
Ga0302270_101264761	3300030011	Bog	PRTVGELQNGETVVRWSGDGRYLFLRQPEGDAIKISRLDVATGHKEPWRTLKVPEPGAVFVGVVALSADGKACAFSFQHDLANLYLVTGLK
Ga0310039_102172651	3300030706	Peatlands Soil	GRYLFLQQREPTSIKISRLDMTTRRKEPWLVVKVPEPGAQFLGPLALSADGKAYAATFQRDLANLFLVRGLK
Ga0265460_112718911	3300030740	Soil	VVRWSSDGGHLFLQQPEGDTIKISRLDVVTGHREPWRTLKVPEPGAQFIGALTLSADGKACAFSFQHDLANLYLVRGLN
Ga0075393_100036731	3300030849	Soil	KLQNGESVVRWSGDGRYLFLRQPEGETIKISRLEIATGRKEPWQTLKGPEPGAEFIGALALSPDGKACAFTFQHDLANLYLVTGLE
Ga0075382_100072532	3300030917	Soil	RNLMKLQNGEAVVRWSGDGRYLFLRQPEGETVKISRLEIATGRKEPWQTLKGPEPGAEFIGALALSPDGKACAFTFQHDLANLYLVTGLE
Ga0075399_100198462	3300030967	Soil	MAKPWCAGAVTGAIFFLRQPEGETVKISRLEIATGRKEPWQTLKGPEPGAEFIGALALSPDGKACAFTFQHDLANLYLVTGLE
Ga0075395_114537121	3300030973	Soil	GGGATRNLMKLQNGEAVVRWSGDGRYLFLRQPEGETVKISRLEIATGRKEPWQTLKGPEPGAEFIGALALSPDGKACAFTFQHDLANLYLVTGLE
Ga0170822_116901912	3300031122	Forest Soil	GPICYGEAVVRWSGDGRYLFLRQPEGETIKISRLEIATGRKEPWQTLKGPEPGAEFIGALALSPDGKACAFTFQHDLANLYLVTGLE
Ga0170822_118976181	3300031122	Forest Soil	IDLQGGESVVRWSGDGRYLFLQQREPAGIKISRLEIATYRKEPWLVVKSPEPGAQFFGPLALSADGKACAATFQRDLANLFLVRGLK
Ga0302325_109186432	3300031234	Palsa	APRKIAQLQNGETVVRWSGDGRYLFLLEPAGDTEKISRLEVANGRKEPWQTLKVPEPGAQFLGALALSADGKECAFSFQHDLANLYLVTGLQ
Ga0302318_100094502	3300031258	Bog	IAGGTPRTVGELQNGETVVRWSGDGRYLFLRQPEGDAIKISRLDVATGHKEPWRTLKVPEPGAVFVGVVALSADGKACAFSFQHDLANLYLVTGLK
Ga0170820_127287031	3300031446	Forest Soil	SGDGRYLFLRQPEGETIKISRLEIATGRKEPWQTLKGPEPGAEFIGALALSPDGKACAFTFQHDLANLYLVTGLE
Ga0170820_153968902	3300031446	Forest Soil	MDTIFSCNSRKGDTIKVSRLEVATGHKELWQTLKVPEPGAEFIGALALSADGKAGAFSFQHDLANLYLVKGLQ
Ga0170818_1150275311	3300031474	Forest Soil	STRNITKLQNGESVVRWSGDGRYLFLRHPEGETVKISRLEIATGRKAPWQTLKGPEPGAEFVGALALSPDGKACAFTFQHDLANLYLVTGLE
Ga0310686_1020813181	3300031708	Soil	RYLFLQQPEGDTIKISRLEVATGHKELWQTLKVPEPGAEFIGALALSADGKAGAFSFQHDLANLYLVRGLK
Ga0307476_103205912	3300031715	Hardwood Forest Soil	VRWSGDGRFLFLQQREPSSIKISRFEVATRRKEPWLVIKVPEPGAEFFGTLALSADGKACATTFQHDLANLFLVQGLK
Ga0307476_104525082	3300031715	Hardwood Forest Soil	SGDGHQLFLQKPEGDAIKISRLDVATGHKELWQTLKNPEPGAEFIGALALSADGKACAFSFQHDLANLYLVKGLK
Ga0307476_112854462	3300031715	Hardwood Forest Soil	RTIVDLQPGESVVRWSTDGRFLFLHQREPASIKISRLNVASRHKEPWLVVKVPEPGAQFLGPLALSADGKACAATFQRDLANLFLVRGLK
Ga0307477_110699501	3300031753	Hardwood Forest Soil	VVRWSGDGHQLFLQKPEGDAIKISRLDVATGHKELWQTLKNPEPGAEFIGALALSADGKACAFSFQHDLANLYLVKGLK
Ga0307475_110022921	3300031754	Hardwood Forest Soil	KTVVDLQTGESVARWSGDGRYLFLQQREAAGIKISRLEIATHRKEPWLVVKAPEPGAQFFGPLALSADGKACAATFQRDLANLFLVRGLK
Ga0307478_102780261	3300031823	Hardwood Forest Soil	GGNSKTVVDLQTGESVARWSGDGRYLFLQQREAAGIKISRLEIATHRKEPWLVVKAPEPGAQFFGPLALSADGKACAATFQRDLANLFLVRGLK
Ga0307478_104713681	3300031823	Hardwood Forest Soil	LLNGESVVRWSGDGHQLFLRQPEGETIKISRLDVATGHKELLQTLNIPEPGAEFIGAFALSADGKACAFSFQHDLANLYLVKGLK
Ga0307478_111082491	3300031823	Hardwood Forest Soil	VRWSADGRYVFLQQREPASITISRLDITSRRKEPWLVVKVPEPGAQFLGPLALSADGKACATTFQRDLANLFLVRGLK
Ga0307471_1018551471	3300032180	Hardwood Forest Soil	MRWSIDGRYVFLQQPEGETIKISRLDVATGRKEPWQTLKVPEPGAEFVGALTLSADGKACAFTFQHDLANLYLVKGLK
Ga0335079_100810064	3300032783	Soil	TKAIADLQAGESAVRWSGDGKYIFLQHREPGSIRITRLDLATHREQPWLEVKVPEPGAEFLGPVALSADGKACATTFQRDLANLFLVRGLK
Ga0335078_100247207	3300032805	Soil	EVADLQPGESVIRWSGDGRYLFLQQREPAIVKISRLEIATHRKEPWLVVKVPEPGATVVGPLAMSADGKACAITFQRDLANLFLVRGLK
Ga0335078_117765401	3300032805	Soil	GGTPKTIVDLQPGESVVRWSGDGRYLFLQQREPASIKITRLDIATQHQEPWLLVKAPEPGATFFGPLAMSADGKACATTFQRDLANLFLVRGLK
Ga0335069_105507144	3300032893	Soil	DLQPGESAVRWSGDGRYLFLQQREAASIKISRLELATHRQEPWLVVKVPEPGATFFGPVALSADGKACATTFQRDLANLFLVRGLR
Ga0335076_111028541	3300032955	Soil	GRYLFLLQREAGSIRVSRLQIATHRKEPWLVVKVPEPGATFWGPVALSADGKACATTFQHDLANLFLVRGLK
Ga0335084_102153871	3300033004	Soil	DGRYLFLQQRNGSGIKISRLEIAKHRREPWRVIKVPEPGATFFGPLALSADGKACATTFQRDLANLFLVRGLK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096277

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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