Metagenome / Metatranscriptome Family F096271

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096271
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	43 residues
Representative Sequence	MERFIAGLVKDFESGKVDRREFCKTVALAATVYAAGDAAQAQ
Number of Associated Samples	90
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.82 %
% of genes near scaffold ends (potentially truncated)	10.48 %
% of genes from short scaffolds (< 2000 bps)	8.57 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (90.476 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (25.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.43% β-sheet: 0.00% Coil/Unstructured: 48.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF15956	DUF4760	7.62
PF04909	Amidohydro_2	2.86
PF13188	PAS_8	2.86
PF03401	TctC	1.90
PF13305	TetR_C_33	1.90
PF14312	FG-GAP_2	1.90
PF01904	DUF72	1.90
PF13601	HTH_34	1.90
PF08450	SGL	0.95
PF00710	Asparaginase	0.95
PF00589	Phage_integrase	0.95
PF08448	PAS_4	0.95
PF05985	EutC	0.95
PF14326	DUF4384	0.95
PF10282	Lactonase	0.95
PF02146	SIR2	0.95
PF00441	Acyl-CoA_dh_1	0.95
PF01977	UbiD	0.95
PF00857	Isochorismatase	0.95
PF00724	Oxidored_FMN	0.95
PF02826	2-Hacid_dh_C	0.95
PF05050	Methyltransf_21	0.95
PF13620	CarboxypepD_reg	0.95
PF02633	Creatininase	0.95
PF01522	Polysacc_deac_1	0.95
PF02424	ApbE	0.95
PF13472	Lipase_GDSL_2	0.95
PF06277	EutA	0.95
PF13432	TPR_16	0.95
PF01436	NHL	0.95
PF04199	Cyclase	0.95
PF01925	TauE	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	1.90
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.90
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	1.90
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.95
COG4819	Ethanolamine utilization protein EutA, possible chaperonin	Amino acid transport and metabolism [E]	0.95
COG4302	Ethanolamine ammonia-lyase, small subunit	Amino acid transport and metabolism [E]	0.95
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.95
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.95
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.95
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.95
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.95
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.95
COG1477	FAD:protein FMN transferase ApbE	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.95
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.95
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.95
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.95
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.48 %
All Organisms	root	All Organisms	9.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.48 %
cellular organisms	root	All Organisms → cellular organisms	9.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.86 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.90 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.90 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.95 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.95 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.95 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.95 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_101445677	All Organisms → cellular organisms → Bacteria → Proteobacteria	1198	Open in IMG/M
3300005554\|Ga0066661_10506363	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300006354\|Ga0075021_10455538	Not Available	807	Open in IMG/M
3300006847\|Ga0075431_100926183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	840	Open in IMG/M
3300010047\|Ga0126382_11464079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300010362\|Ga0126377_10141167	All Organisms → cellular organisms → Bacteria	2253	Open in IMG/M
3300012189\|Ga0137388_10970507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300012207\|Ga0137381_10084545	All Organisms → cellular organisms → Bacteria → Acidobacteria	2670	Open in IMG/M
3300027874\|Ga0209465_10516770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300027903\|Ga0209488_10283672	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1238	Open in IMG/M
3300031770\|Ga0318521_10262727	All Organisms → cellular organisms → Bacteria → Proteobacteria	1010	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.43%
Host-Associated	Host-Associated	8.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Aquatic	Environmental → Aquatic	11.43%
Plants	Host-Associated → Plants	7.62%
Arthropoda	Host-Associated → Arthropoda	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.71%
Freshwater	Environmental → Aquatic → Freshwater	4.76%
Sediment	Environmental → Aquatic → Sediment	3.81%
Marine	Environmental → Aquatic → Marine	2.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.90%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.81%
Loam	Environmental → Terrestrial → Soil → Loam	12.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.81%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.95%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.95%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.90%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.95%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.95%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.90%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.95%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.95%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.95%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.95%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.95%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.95%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.95%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001372	YB-Back-sed	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031804	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1002174131	3300000955	Soil	MERFIADLVKDFEGGKIDRRQFCETVALAATVYAAGSAAQAAPAQGLKM
YBBDRAFT_10615572	3300001372	Marine Estuarine	MERFIADLVKDFESGKINRRQFCETVALATTVFAA
JGI12053J15887_102927921	3300001661	Forest Soil	MERFIADLVKQFEGGTVDRREFCQTVALAAAVYAAGDTANAQTGTGFKV
JGI12053J15887_104170721	3300001661	Forest Soil	MERFIANLVKDFESGKLDRRQFCETVALAATVYAAGEGAANAAP
JGIcombinedJ26739_1013189972	3300002245	Forest Soil	MERFIAGLVKDFESGKVDRREFCQTVALAAVVYGTGEAANAQ
soilH1_103803631	3300003321	Sugarcane Root And Bulk Soil	MERFIADLVKRFEDGKITRRQFCETVAVAATVYAAGESAANAAPTQGFK
Ga0062389_1045595941	3300004092	Bog Forest Soil	MERFIAGLVTDFESGKVDRREFCQTVALAAVVYAAGDAAN
Ga0066676_101686413	3300005186	Soil	MERFIADLVKNFESGKINRRQFCETVALAATVYAAGEEAANAAPSQGFK
Ga0066388_1014456772	3300005332	Tropical Forest Soil	MERFIADLVQGLDSGRIDRREFCKSVALAAAVYGAGDAAQAQVQRGFKI
Ga0066388_1070458381	3300005332	Tropical Forest Soil	MERFIAGLVQGLDSGKIDRREFCKSVALAAAVYGAGDAAQAQVQRGFK
Ga0070703_102764891	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MERFIADLVKDFESGKVSRRQFCETVALAATVYAAGDAAQAAPAQG
Ga0066661_105063631	3300005554	Soil	MERFIAGLVQGLDSGKIDRREFCQSVALAAAVYGAGDAAQAQVQRGFKII
Ga0070762_101446811	3300005602	Soil	MEGFVADLVKSFESGKIDSREFCQTIALAATVYAAGDAAHAQTSTG
Ga0081540_11705192	3300005983	Tabebuia Heterophylla Rhizosphere	MERFIADLVRNFESGRINRRQFCEAVTLAASVYAMGDAAKAQPARGLK
Ga0075021_104555382	3300006354	Watersheds	MERFIADLVRSFESGKIDRRQFCEAVALATTVFAAGSAAEAAPARGLK
Ga0075021_110857133	3300006354	Watersheds	MERFIADLVQGLDSGQIDRREFCKTVALAAAVYGAGDAAQ
Ga0066658_104956051	3300006794	Soil	MERFIADLVKRFEGGKIDRREFCQTVALAATVCAAG
Ga0075431_1009261832	3300006847	Populus Rhizosphere	MERFIADLVKQFEGGAIDRREFCQTVALAAAVYAAGDAANAQTGTGFKV
Ga0075425_1009520532	3300006854	Populus Rhizosphere	MERFIADLVKQFEGGAIDRREFCQTVALAAAVYAAG
Ga0066710_1041766001	3300009012	Grasslands Soil	MERFIADLVQDFESGKINRRQFCETVALAATVYAAGEEAANAAPSQGFK
Ga0111539_114833631	3300009094	Populus Rhizosphere	MERFIADLVKDFESGKVSRRQFCETVALAATVYAAGDAAQAAPAQ
Ga0099792_100018257	3300009143	Vadose Zone Soil	MERFIADLVKQFEGGTVDRREFCQTVALAAAVYAAGDTA
Ga0099792_105352781	3300009143	Vadose Zone Soil	MERFIADLVKDYESGKVDRREFCKTVALAATVYAAGDAAMAQ
Ga0116216_105292361	3300009698	Peatlands Soil	MERFIADLVQGLDAGRLDRREFCQAVALAAAVYGAGDAAQAQAK
Ga0126384_103337731	3300010046	Tropical Forest Soil	MERFIADLVQDFESGKINRRQFCETVALAATVYAAG
Ga0126384_115504582	3300010046	Tropical Forest Soil	MERFIADLVQGLDSGRIDRREFCKSVALAAVVYSAGDAAQAQVPRGF
Ga0126382_114640792	3300010047	Tropical Forest Soil	MGAPIREDYGMERFIADLVSSFESGKIDRRQFCETVALAATVYAAGTAATEAAPARGL
Ga0123356_110464351	3300010049	Termite Gut	MERFIAGLVQDLDSGNIDRREFCKSVALAAAVYGAGDAA
Ga0126370_102639111	3300010358	Tropical Forest Soil	MERFIANLAEGLDTGAIDRREFCKAAALAAAVYGAGEA
Ga0126376_114772261	3300010359	Tropical Forest Soil	MERFIADLVQGLDSGKIDRREFCQAVALAAAVYGAGDAAQ
Ga0126372_104221123	3300010360	Tropical Forest Soil	MERFIANLVEGLDTGAIDRREFCKAVALAAAVYGAGDAAR
Ga0126372_129776823	3300010360	Tropical Forest Soil	MERFIANLVKQYESGAVDRREFCKTLALAATVYAAGDTAKA
Ga0126378_105226361	3300010361	Tropical Forest Soil	MERFIAGLVKDFERGKLDRREFCQTVALAAVVYGAGEAANAQV
Ga0126378_125422451	3300010361	Tropical Forest Soil	MERFIADLVQGLDNGRIDRREFCQAVALAAAVYGAGDAAQAQAPR
Ga0126377_101411671	3300010362	Tropical Forest Soil	MGAPIREDYGMERFIADLVSSFESGKIDRRQFCETVALAATVYAAGTAATEAAPARG
Ga0134124_109038251	3300010397	Terrestrial Soil	MERFIADLVKRFEDGKITRRQFCETVAVAATVYAAGESAANAAPTQGFKMIA
Ga0126383_100961694	3300010398	Tropical Forest Soil	MERFIADLVKQFEGGAIDRREFCQTVALAAAVYATGDAANAQTGTGFK
Ga0134123_132348502	3300010403	Terrestrial Soil	MERFIADLVKKYESGAINRREFCQTVTLAATVYAAGDAAHAQAP
Ga0137388_109705072	3300012189	Vadose Zone Soil	MERCIADLVQGLDGGKIDRREFCQAVALAAAVYGAGDAAQAQAQRGFKIIG
Ga0137364_106081961	3300012198	Vadose Zone Soil	MERFIADLVQDFESGKINRRQFCETVALAATVYAAGEEAANA
Ga0137382_110748271	3300012200	Vadose Zone Soil	MERFIADLVKDFDSGKVDRREFCQTVALAAMVYAA
Ga0137399_114596411	3300012203	Vadose Zone Soil	MERFIANLVKDFEAGKITRRQVCEGVAIAATVYGAGGAAK
Ga0137381_100845451	3300012207	Vadose Zone Soil	MERFIADLVQDFESGKINRRQFCETVALAATVYAA
Ga0150985_1198681013	3300012212	Avena Fatua Rhizosphere	MERFIADLVKKFETGAVDRREFCQTVSLAAAVYAAGDAAQAQTGT
Ga0137368_101366071	3300012358	Vadose Zone Soil	MERFIADLVKNYESGAIDRREFCKTVALAATVYAAGDAAKA
Ga0137385_111155701	3300012359	Vadose Zone Soil	MERFIAGLVKDFETGKMTRRQFGEAVAIAAIVYGYGTDAK
Ga0137360_111875371	3300012361	Vadose Zone Soil	MERFIADLVKDYESGKIDRREFCKTVALAATVYAAGDTAMAQAPRG
Ga0137416_110124671	3300012927	Vadose Zone Soil	MERFIADLVKDYESGKVDRREFCKTVALAATVYAA
Ga0137404_106246671	3300012929	Vadose Zone Soil	MERLIADLVKKFESGAVSRREFCETVALAATVYAAGDA
Ga0126375_107025832	3300012948	Tropical Forest Soil	MERFIADLVRNFESGRIKRRQFCEAVTLAATVYAAGDAAKAQPARGL
Ga0126369_100908464	3300012971	Tropical Forest Soil	MERFIADLVQGLDSGKIDRREFCKSVALAAAVYGAGDAARAQVQRGFK
Ga0126369_101077824	3300012971	Tropical Forest Soil	MERFIANLVEGLDTGAIDRREFCKAVALAAAVYGAG
Ga0157380_110888202	3300014326	Switchgrass Rhizosphere	MERFIADLFKDFESGKVSRRQFCETVALAATVYAAGDA
Ga0137412_113216241	3300015242	Vadose Zone Soil	MERFVAGLVDDLESGKMDRRQFCQTMALAATVYAAGETAANAAASQ
Ga0182041_105213511	3300016294	Soil	MERFIAGLVKDYQTGRIDRREFCQTVALAAAVYGAGSAANAQNTGKGFK
Ga0181505_108274072	3300016750	Peatland	MERFIADLVEDLDKGQIDRREFCQAVALAAAVYGAGEAAQAQEA
Ga0134083_103451141	3300017659	Grasslands Soil	MERFIADMVQDFESGKINRRQFCETVALAATVYAAGEEAAN
Ga0187808_102420331	3300017942	Freshwater Sediment	MERFIADLVQGLDSGKIDRREFCKSVALAAAVYGA
Ga0187782_113470352	3300017975	Tropical Peatland	MERFIADLVKAFEAGKLSRREFCQTVALAASVYAA
Ga0187823_100438603	3300017993	Freshwater Sediment	MERFIADLVKRFESGKMDRREFCQTVALAATVFAAGDAAHAQ
Ga0187787_101824242	3300018029	Tropical Peatland	MERFIADLVKQFEGGAIDRREFCQTVALAAAVYAAGDAA
Ga0184620_100790052	3300018051	Groundwater Sediment	MERFIADLVKQFEGGAIDRREFCQTVTLAAAVYAASDGLST
Ga0187765_109486522	3300018060	Tropical Peatland	MERFIDNLVQGLDRGAIDRREFCQAMALAAAVYGVGEAAQAQASR
Ga0187772_110666722	3300018085	Tropical Peatland	MERFIADLVRAFEAGKLSRREFCQTVALAATVYAAGDTADAQ
Ga0066662_113798862	3300018468	Grasslands Soil	MERFIADLVKQFEGGAIDRREFCQTVALAAAAYAAGD
Ga0066669_105552142	3300018482	Grasslands Soil	MEKFIANLVKNFESGQIDRREFCQTVALAATVYAAGDAANA
Ga0210403_113976361	3300020580	Soil	MERFIADLVKSFESGKVDRREFCKTVALAATVYAAADAAQ
Ga0210401_111038251	3300020583	Soil	MEQFFADLVKDFENGRINRRQFCETVALAATVYAA
Ga0210394_100691284	3300021420	Soil	MERFVADLVKSFESGKIDRREFCQTIALAATVYAAGDAAHA
Ga0210394_107153362	3300021420	Soil	MERFIADLVKDFDSGKVDRREFCQTVALAAVVYASGEAANA
Ga0126371_134774051	3300021560	Tropical Forest Soil	MERFIADLVQGLDRGRIDRREFCQAVALAAAVYSAGD
Ga0213853_107814642	3300021861	Watersheds	MERFIADLVKGFESGKLSRREFCETVALAATVYAAGDAANAQPARGFKL
Ga0207663_106955382	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MERFIAGLVKDFEAGKLSRREFCEAVALAAVVYGAGDAAKA
Ga0207700_116621182	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MERFIADLVKSFESGKLDRREFCKTVALAATVYAAGDAAQAQAP
Ga0207664_116801201	3300025929	Agricultural Soil	MERFIAGLVKDFEAGKLSRREFCEAVALAAVVYGAGDAAKAA
Ga0209375_12983892	3300026329	Soil	MERFIADLVKNFESGKINRRQFCETVALAATVYAAGEEAANA
Ga0257172_10001817	3300026482	Soil	MERFIAGLVKDFERGKLDRREFCQTVALAAAVYGAGDA
Ga0209056_100805941	3300026538	Soil	MERFIADLVQDFESGKINRRQFCETVALAATVYAAGEEAANAAPSQGFKM
Ga0208042_11270212	3300027568	Peatlands Soil	MERFIAGLVNDFERGTVDRREFCQTVALAAVVYGAG
Ga0209073_102282262	3300027765	Agricultural Soil	MEKFISGLVKDFEAGKITRRDFCEAVALAAIVYGAGDAANAATAKGFKM
Ga0209465_102303231	3300027874	Tropical Forest Soil	MECFIADLVQGLDSGRIDRREFCQAVALAAAVYGAGDA
Ga0209465_105167702	3300027874	Tropical Forest Soil	MERFIAGLVKDFESGKLDRREFCQTVALAAVVYGAGEAANAQVARGFK
Ga0209068_108216042	3300027894	Watersheds	MERFISNLVQGLDSGEIDRREFCKAVVLAAAVYGAGD
Ga0209624_104025621	3300027895	Forest Soil	MERFIADLVGDYERGKVDRSEFCKTVALAATVYAAGDTARAQAPRGLK
Ga0209488_102836721	3300027903	Vadose Zone Soil	MERFIAGLVKDFESGKMDRREFCQTVALAAAVYGAGDAANAQATRGFK
Ga0207428_103924561	3300027907	Populus Rhizosphere	MERFIADLVKDFESGKVSRRQFCETVALAATVYAAGDAAQAAPA
Ga0207428_109506222	3300027907	Populus Rhizosphere	MERFIADLVKQFEGGAIDRREFCQTVALAAAVYAAGDAANAQTG
Ga0307287_101163061	3300028796	Soil	MERFIADLVKQFEGGAIDRREFCQTVVLAAAVYAAGDAANAQ
Ga0310686_1007590032	3300031708	Soil	MERFIADLVKGFESGKLSRREFCETVALAATVYAAGDAANAQPA
Ga0310686_1178947422	3300031708	Soil	MERFIADLVKNFESGKLSRREFCETVALAATVYAAGDAANA
Ga0307476_108081311	3300031715	Hardwood Forest Soil	MERFIAGLVKDFEAGKITRRQFCEAVALAAAVYGFGDAAKAAPARG
Ga0307469_104778491	3300031720	Hardwood Forest Soil	MERFIADLVRNFESGRINRRQFCESVALAASVYAMGDAANAQTS
Ga0318521_102627271	3300031770	Soil	MERFIAGLVKDFESGKVDRREFCKTVALAATVYAAGDAAQAQPTRGFKV
Ga0310122_103896782	3300031800	Marine	VEQFIADLVKEYECGKIDRRRFCETVGIAAVVYAAGEGAANAA
Ga0310124_101827962	3300031804	Marine	VEQFIADLVKEYECGKIDRRRFCETVGIAAVVYAAGEGAANAT
Ga0306925_122304322	3300031890	Soil	MERFIADLVKNYESGKVNRREFCQTVALAATVYAAGDAAKAQAPRGLK
Ga0318536_100607231	3300031893	Soil	MERFIAGLVRDFESGKVDRREFCKTIALAATVYAAGDAAEAQPARGFKV
Ga0306923_109250972	3300031910	Soil	MERFIADLVQGLDNGRIDRREFCQAVALAAAVYGAG
Ga0318505_102057291	3300032060	Soil	MERFIAGLVKDFESGKVDRREFCKTVALAATVYAAD
Ga0318553_102563813	3300032068	Soil	MERFIAGLVKDFESGKVDRREFCKTVALAATVYAAGDAAQAQ
Ga0306920_1015535031	3300032261	Soil	MERFIADLVKSFESGKMDRREFCQTVALAATVYAAGDAANAQAPSGMK
Ga0306920_1022601561	3300032261	Soil	MERFIADLVQGLDSGKIDRREFCKAVALAAAVYGAGDAAQAQAQRGF
Ga0306920_1032430702	3300032261	Soil	MERFIAGLVKDFEAGKITRRQFGEGVAIAATVYGFGDAAKAAPAKGMK
Ga0306920_1039682572	3300032261	Soil	MERFIADLVRDYESGKVDRREFCKTVALAATVYAAGDAATAQA
Ga0310914_109485981	3300033289	Soil	MERFIAGLVKDFESGKVGRREFCQTVALAAVVYGAGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096271

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences