NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F096264

Metagenome Family F096264

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096264
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 82 residues
Representative Sequence MAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPRVIDAGRRVIAQNRSVLERLAKDDPGARAGRR
Number of Associated Samples 80
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 74.29 %
% of genes near scaffold ends (potentially truncated) 21.90 %
% of genes from short scaffolds (< 2000 bps) 67.62 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.238 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(21.905 % of family members)
Environment Ontology (ENVO) Unclassified
(38.095 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.714 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 31.53%    β-sheet: 21.62%    Coil/Unstructured: 46.85%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF02661Fic 20.00
PF14559TPR_19 8.57
PF13432TPR_16 7.62
PF07992Pyr_redox_2 6.67
PF00266Aminotran_5 3.81
PF00152tRNA-synt_2 1.90
PF13414TPR_11 1.90
PF01479S4 1.90
PF07883Cupin_2 1.90
PF00160Pro_isomerase 0.95
PF05960DUF885 0.95
PF00528BPD_transp_1 0.95
PF00004AAA 0.95
PF03764EFG_IV 0.95
PF13181TPR_8 0.95
PF03575Peptidase_S51 0.95
PF00679EFG_C 0.95
PF01934HepT-like 0.95
PF02810SEC-C 0.95
PF02075RuvC 0.95
PF07690MFS_1 0.95
PF07508Recombinase 0.95
PF01411tRNA-synt_2c 0.95
PF01850PIN 0.95
PF00005ABC_tran 0.95
PF00589Phage_integrase 0.95
PF08327AHSA1 0.95
PF01717Meth_synt_2 0.95
PF08818DUF1801 0.95
PF16363GDP_Man_Dehyd 0.95
PF06831H2TH 0.95
PF13549ATP-grasp_5 0.95
PF03054tRNA_Me_trans 0.95
PF01636APH 0.95
PF01118Semialdhyde_dh 0.95
PF00293NUDIX 0.95
PF14016DUF4232 0.95
PF02604PhdYeFM_antitox 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0017Aspartyl/asparaginyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 1.90
COG0173Aspartyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 1.90
COG1190Lysyl-tRNA synthetase, class IITranslation, ribosomal structure and biogenesis [J] 1.90
COG2269Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)Translation, ribosomal structure and biogenesis [J] 1.90
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 0.95
COG0013Alanyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.95
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 0.95
COG4805Uncharacterized conserved protein, DUF885 familyFunction unknown [S] 0.95
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 0.95
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.95
COG2445Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 familyGeneral function prediction only [R] 0.95
COG2361HEPN domain protein, predicted toxin of MNT-HEPN systemDefense mechanisms [V] 0.95
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.95
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.95
COG0817Holliday junction resolvasome RuvABC endonuclease subunit RuvCReplication, recombination and repair [L] 0.95
COG0652Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin familyPosttranslational modification, protein turnover, chaperones [O] 0.95
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 0.95
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 0.95
COG0480Translation elongation factor EF-G, a GTPaseTranslation, ribosomal structure and biogenesis [J] 0.95
COG0266Formamidopyrimidine-DNA glycosylaseReplication, recombination and repair [L] 0.95

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.19 %
UnclassifiedrootN/A3.81 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001380|JGI1356J14229_10139407All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300002025|smpD1_1026802All Organisms → cellular organisms → Bacteria2375Open in IMG/M
3300002912|JGI25386J43895_10009924All Organisms → cellular organisms → Bacteria2706Open in IMG/M
3300005166|Ga0066674_10014246All Organisms → cellular organisms → Bacteria3355Open in IMG/M
3300005166|Ga0066674_10051248All Organisms → cellular organisms → Bacteria1862Open in IMG/M
3300005172|Ga0066683_10356446All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300005174|Ga0066680_10060961All Organisms → cellular organisms → Bacteria2240Open in IMG/M
3300005174|Ga0066680_10600157All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300005174|Ga0066680_10905452All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005186|Ga0066676_10305510All Organisms → Viruses → Predicted Viral1054Open in IMG/M
3300005406|Ga0070703_10394014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica601Open in IMG/M
3300005445|Ga0070708_100007897All Organisms → cellular organisms → Bacteria8518Open in IMG/M
3300005445|Ga0070708_100796284All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300005446|Ga0066686_10418618All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300005447|Ga0066689_10016298All Organisms → cellular organisms → Bacteria3536Open in IMG/M
3300005467|Ga0070706_102141620All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Cupidesulfovibrio → Cupidesulfovibrio termitidis505Open in IMG/M
3300005471|Ga0070698_100000519All Organisms → cellular organisms → Bacteria41035Open in IMG/M
3300005471|Ga0070698_100178678All Organisms → cellular organisms → Bacteria2061Open in IMG/M
3300005518|Ga0070699_100057544All Organisms → cellular organisms → Bacteria3367Open in IMG/M
3300005518|Ga0070699_101488025All Organisms → cellular organisms → Bacteria → Proteobacteria621Open in IMG/M
3300005537|Ga0070730_10731139All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae626Open in IMG/M
3300005552|Ga0066701_10726555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus595Open in IMG/M
3300005553|Ga0066695_10092203All Organisms → cellular organisms → Bacteria → Proteobacteria1851Open in IMG/M
3300005553|Ga0066695_10222784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1187Open in IMG/M
3300005555|Ga0066692_11016841All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005557|Ga0066704_10183521All Organisms → cellular organisms → Bacteria1411Open in IMG/M
3300005558|Ga0066698_10853923All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300005560|Ga0066670_10660925All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300005576|Ga0066708_10064864All Organisms → cellular organisms → Bacteria2084Open in IMG/M
3300005598|Ga0066706_11046442All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300006058|Ga0075432_10473761All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300006847|Ga0075431_100026422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus5957Open in IMG/M
3300006852|Ga0075433_10018441All Organisms → cellular organisms → Bacteria5801Open in IMG/M
3300006852|Ga0075433_10680442All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300006903|Ga0075426_11274221All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300006904|Ga0075424_102854972All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum baldaniorum503Open in IMG/M
3300006914|Ga0075436_101488487All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300006969|Ga0075419_10086997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1996Open in IMG/M
3300007255|Ga0099791_10003649All Organisms → cellular organisms → Bacteria6275Open in IMG/M
3300009012|Ga0066710_100021033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi7228Open in IMG/M
3300009012|Ga0066710_101816151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi919Open in IMG/M
3300009038|Ga0099829_10120217All Organisms → cellular organisms → Bacteria2067Open in IMG/M
3300009090|Ga0099827_11310553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium630Open in IMG/M
3300009147|Ga0114129_10650229All Organisms → cellular organisms → Bacteria1361Open in IMG/M
3300009777|Ga0105164_10002116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi12375Open in IMG/M
3300009777|Ga0105164_10033160All Organisms → cellular organisms → Bacteria2833Open in IMG/M
3300009777|Ga0105164_10044673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2397Open in IMG/M
3300009777|Ga0105164_10510319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → unclassified Thermoflexia → Thermoflexia bacterium596Open in IMG/M
3300010323|Ga0134086_10077975All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1150Open in IMG/M
3300010336|Ga0134071_10158972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1102Open in IMG/M
3300010336|Ga0134071_10736268All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi524Open in IMG/M
3300011994|Ga0120157_1117007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium508Open in IMG/M
3300012092|Ga0136621_1119922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1063Open in IMG/M
3300012096|Ga0137389_11354512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium606Open in IMG/M
3300012204|Ga0137374_10719968All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium747Open in IMG/M
3300012208|Ga0137376_10004952All Organisms → cellular organisms → Bacteria8712Open in IMG/M
3300012211|Ga0137377_10758102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium904Open in IMG/M
3300012350|Ga0137372_10184070All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1683Open in IMG/M
3300012355|Ga0137369_10512986All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium845Open in IMG/M
3300012532|Ga0137373_10378320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1105Open in IMG/M
3300012944|Ga0137410_10481420All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300012977|Ga0134087_10323282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium729Open in IMG/M
3300014154|Ga0134075_10405217All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium603Open in IMG/M
3300015079|Ga0167657_1000468All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium10478Open in IMG/M
3300017787|Ga0183260_10023006All Organisms → cellular organisms → Bacteria4739Open in IMG/M
3300017997|Ga0184610_1049479All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1239Open in IMG/M
3300018031|Ga0184634_10074465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1448Open in IMG/M
3300018075|Ga0184632_10121627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1148Open in IMG/M
3300018076|Ga0184609_10353627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium685Open in IMG/M
3300018082|Ga0184639_10627476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi523Open in IMG/M
3300018431|Ga0066655_10010661All Organisms → cellular organisms → Bacteria3970Open in IMG/M
3300018431|Ga0066655_10147224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1393Open in IMG/M
3300018431|Ga0066655_10227608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1174Open in IMG/M
3300018433|Ga0066667_11423923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium609Open in IMG/M
3300018468|Ga0066662_10293968All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1360Open in IMG/M
3300018468|Ga0066662_11323624All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi740Open in IMG/M
3300018482|Ga0066669_11813560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium564Open in IMG/M
3300021080|Ga0210382_10034505All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1921Open in IMG/M
3300021080|Ga0210382_10340883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium661Open in IMG/M
3300021080|Ga0210382_10479524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium551Open in IMG/M
3300022694|Ga0222623_10015206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2839Open in IMG/M
3300025173|Ga0209824_10001048All Organisms → cellular organisms → Bacteria16309Open in IMG/M
3300025173|Ga0209824_10011747All Organisms → cellular organisms → Bacteria3780Open in IMG/M
3300025173|Ga0209824_10021573All Organisms → cellular organisms → Bacteria2645Open in IMG/M
3300025910|Ga0207684_10000029All Organisms → cellular organisms → Bacteria305483Open in IMG/M
3300025910|Ga0207684_10023855All Organisms → cellular organisms → Bacteria5220Open in IMG/M
3300025910|Ga0207684_10650197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi898Open in IMG/M
3300026298|Ga0209236_1284849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi534Open in IMG/M
3300026318|Ga0209471_1012926All Organisms → cellular organisms → Bacteria4328Open in IMG/M
3300026320|Ga0209131_1168731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1078Open in IMG/M
3300026334|Ga0209377_1243791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium590Open in IMG/M
3300026523|Ga0209808_1005897All Organisms → cellular organisms → Bacteria6238Open in IMG/M
3300026532|Ga0209160_1157465All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300026548|Ga0209161_10032036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3615Open in IMG/M
3300027655|Ga0209388_1012169All Organisms → cellular organisms → Bacteria2332Open in IMG/M
3300027678|Ga0209011_1208766Not Available529Open in IMG/M
3300027819|Ga0209514_10262080Not Available816Open in IMG/M
3300027819|Ga0209514_10404989Not Available586Open in IMG/M
3300027862|Ga0209701_10153149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1406Open in IMG/M
3300027875|Ga0209283_10334112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi996Open in IMG/M
3300027880|Ga0209481_10003166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi6859Open in IMG/M
3300028881|Ga0307277_10044101All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1806Open in IMG/M
3300028881|Ga0307277_10058333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1582Open in IMG/M
3300031965|Ga0326597_10176255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2529Open in IMG/M
3300031965|Ga0326597_11701149Not Available596Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil21.90%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil13.33%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil11.43%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.48%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.52%
WastewaterEnvironmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater6.67%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.81%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.86%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater2.86%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand1.90%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.95%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.95%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.95%
Permafrost And Active Layer SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost And Active Layer Soil0.95%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.95%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001380Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 mEnvironmentalOpen in IMG/M
3300002025Permafrost and active layer soil microbial communities from McGill Arctic Research Station (MARS), Canada, for enrichment studies - Sample_D1EnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009777Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking waterEnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300011994Permafrost microbial communities from Nunavut, Canada - A7_65cm_12MEnvironmentalOpen in IMG/M
3300012092Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015079Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300017787Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025173Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027819Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1356J14229_1013940713300001380GroundwaterMDIVKIRRQGNSLSVTLDQETLAAANLHEGDLVAPSVQKGVVVLTPVEIRPKVRPQVLRVGRKIIAENRRVLDRLAKDDSGRAAAGQR*
smpD1_102680223300002025Permafrost And Active Layer SoilMDVVKIRKQGNSLSVTLDQATLGAANLHEGDLVAPTVQKGVVVLTPVEIRPKVRAQTLQIGRRIIAENRRVLDRLAKDDRGRVAAGHR*
JGI25386J43895_1000992433300002912Grasslands SoilMAAVKIRRQGNSLAVTLDQETLDAAKLREGDLVVPTVKAGVVVLTPVELRPRVLDAGRRVTLENRRVLDRLRKV*
Ga0066674_1001424643300005166SoilMEVVKIRKQGNSLGVTLDQRTLGEAHLREGDLVAPSVRNGTIVLTPVDIRPRTLALGRRVIDQNRRVLDRLARDERRRPATGRR*
Ga0066674_1005124833300005166SoilMDVMKIRRQGNSLSVTLDQETLGAAHLSEGDLVTASVRNGAVVLTPVEIRPRVLDVGRKVISRNRRVLERLARDENRQAPAVRR*
Ga0066683_1035644623300005172SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPRVIEAGRKLIAQNRSVLQRLAKDDPGARAGRR*
Ga0066680_1006096123300005174SoilVKIRRQGNSLAVTLDQETLDAAKLREGDLVVPTVKAGVVVLTAVELRPRVLDAGRRVISENRRVLDRLRKV*
Ga0066680_1060015723300005174SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPRVIEAGRRLIAQNRSVLQRLAKDDPGARAGRR*
Ga0066680_1090545223300005174SoilMAAVKIRRQGNSLAVTLDQKTLDAARLREGDLVLPMVKAGVVVLTPVELRPRVLEAGRRVIAENRRVLDRLGKV*
Ga0066676_1030551023300005186SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVELRRKVVEAGRKVIAQNRSVRDRLAKDVRGTSSGRR*
Ga0070703_1039401413300005406Corn, Switchgrass And Miscanthus RhizosphereMDVVKIRRQGNSLSVTLDQATLDAANLHEGDLVAPSVQKGVVVLTPVEIRPKVRPRVLHVGRRIIAENRRVLDRLAKGDSREGSH*
Ga0070708_10000789733300005445Corn, Switchgrass And Miscanthus RhizosphereMDVVKIRKQGNSLSVTLDQATLDAANLHEGDLVAPSVQKGVVVLTPVEIRPKVRPRVLQVGRRIIAENRRVLDRLDRADRATATGSRQSKAS*
Ga0070708_10079628413300005445Corn, Switchgrass And Miscanthus RhizosphereVDAVKIRRQGNSLSVTLDQETLRHANLREGDRVAPTVRNGVVVLVPVEIRPRVLEVGRKVIARNRRVLDRLAKG*
Ga0066686_1041861833300005446SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPRVIDAGRRVIAQNRSVLERLAKDDPGARAGRR*
Ga0066689_1001629823300005447SoilVKIRRQGNSLAVTLDQETLDAAKLREGDLVVPTVKAGVVVLTPVELRPRVLDAGRRVTLENRRVLDRLRKV*
Ga0070706_10214162013300005467Corn, Switchgrass And Miscanthus RhizosphereMAAVKIRKQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVIVLTPVEIRPKVIDAGRKVIAQNRSVLERLAKDDRGTGSGRR*
Ga0070698_100000519353300005471Corn, Switchgrass And Miscanthus RhizosphereMVVKIRRQGNSLAVTLDQNTLEAARLREGDLVTTTVRGGIVMLTPVEVTPRARTNVLEAGRRVIARNRRVLDRLANDDHPQAGAGRR*
Ga0070698_10017867853300005471Corn, Switchgrass And Miscanthus RhizosphereVDAVKIRRQGNSLSVTLDQETLRHANLREGDRVAPTVRNGVVVLIPVEIRPRVLEVGRKVIARNRRVLDRLAKG*
Ga0070699_10005754413300005518Corn, Switchgrass And Miscanthus RhizosphereVDAVKIRRQGNSLSVTLDQETLRHANLREGDRVAPTVRNGVVVLVPVEIRPRVLEVGRKVIARNRRVLDRLAK
Ga0070699_10148802523300005518Corn, Switchgrass And Miscanthus RhizosphereMAAVKIRRQGNSLAVTLDQETLDAAKLREGDLVVPTVKAGVVVLTPVELRPRVLEAGRRVIAENRRVLDRLRKA*
Ga0070730_1073113913300005537Surface SoilMDVVKIRRQGNSLSVTLDQETLGAANLHEGDLVAPTVQKGVVLLTPVEIRPKVRPQVLRLGRRIIAENRGALDRLAKDDSGRTAAGRR*
Ga0066701_1072655523300005552SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPRVIAAGRRVIAQNRSVLQRLAKDDPGARAGRR*
Ga0066695_1009220323300005553SoilVKIRRQGNSLAVTLDQETLDAARLREGDLVVPTVKAGVVVLTAVELRPRVLDAGRRVISENRRVLDRLRKV*
Ga0066695_1022278433300005553SoilRMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPRVIEAGRKLIAQNRSVLQRLAKDDPGARAGRR*
Ga0066692_1101684113300005555SoilRQGNSLGVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPRVIEAGRRVIAQNRNVLERLAKDDPGARAGRR*
Ga0066704_1018352123300005557SoilVKIRRQGNSLAVTLDQETLDAAKLREGDLVVPTVKAGVVVLTPVELRPRVLDAARRVTSENRRVLDRLRKV*
Ga0066698_1085392313300005558SoilMKIRRQGNSLSVTLNQDTLGEAHLSEGDLVTASVRNGAVVLTPVEIRPRVLDVGRKVIGRNRRLLARLERG*
Ga0066670_1066092513300005560SoilMDVMKIRRQGNSLSVTLDQETLGAAHLSEGDLVTATVRNGAVVLTPVEIRPRVLDVGRKVISRNRRVLERLAKDEYRKAPTVRR*
Ga0066708_1006486413300005576SoilVMKIRRQGNSLSVTLDQETLGAAHLSEGDLVTASVRNGAVVLTPVEIRPRVLDVGRKVISRNRRVLERLARDENRQAPAVRR*
Ga0066706_1104644223300005598SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVELRRKVVEAGRKVIAQNRTVLDRLAKDDRGTSSGPR*
Ga0075432_1047376123300006058Populus RhizosphereVDVVKIRRQGNSLGVTLDQRTLGEANLHEGDLVASSVRNGTIVLTPVDIRPRTLAVGRRVIEANRRVLDR
Ga0075431_10002642223300006847Populus RhizosphereMSAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQATVRGGVVVLTPVEIRPKLIETGRRVIAQNRSVLDRLGKDDRGGSARRR*
Ga0075433_1001844153300006852Populus RhizosphereMAAVKIRRQGNSLAVTLDQETLGAANLHEGDLVQPTVRGGVVVLTPVELRPKVIEAGRRVITQNRTVLDRLAKDDRGTSSARR*
Ga0075433_1068044213300006852Populus RhizosphereVDVVKIRRQGNSLGVTLDQRTLGEANLHEGDLVASSVRNGTIVLTPVDIRPRTLAVGRRVIEANRRVLDRLAKDERGKGTTGRR*
Ga0075426_1127422113300006903Populus RhizosphereVDVVKIRRQGNSLGVTLDQRTLGEANLHEGDLVASSVRNGTIVLTPVDIRPRTLAVGRRVIEANRRVLDRLA
Ga0075424_10285497213300006904Populus RhizosphereVDVVKIRRQGNSLGVTLDQRTLGEAHLREGDLVAPSVRNGTIVLTPVDIRPRTLAIGRRVIDQNRRVLDRLARDERRRPATGRR*
Ga0075436_10148848723300006914Populus RhizosphereVDVVKIRRQGNSLGVTLDQRTLGEANLHEGDLVASSVRNGTIVLTPVDIRPRTLAVGRRVIEANRRV
Ga0075419_1008699733300006969Populus RhizosphereMSAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQATVRGGVVVLTPVEIRPKLIEPGRRVIAQNRSVLDRLAKDDRGGSARRR*
Ga0099791_1000364943300007255Vadose Zone SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPKVIDAGRKVIAQNRSVLERLAKDDRGTGSGRR*
Ga0066710_10002103393300009012Grasslands SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPRVIDAGRRVIAQNRSVLERLAKDDPGARAGRR
Ga0066710_10181615123300009012Grasslands SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPSVRGGVVVLTPVELRPKVIEAGRKVIAQNRSVLDRLAKEDRGTSSGRRSRSRIRLA
Ga0099829_1012021723300009038Vadose Zone SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPSVRGGVVVLTPVEIRPKVIDAGRKVIAQNRSVLERLAKDDRGTGSGRR*
Ga0099827_1131055313300009090Vadose Zone SoilAIMDVMKIRRQGNSLSVTLDQETLGAAHLSEGDLVTASVRNGAVVLTPVEIRPRVLDVGRRVIGRNRRLLERLAKDDNRQAPTVRR*
Ga0114129_1065022913300009147Populus RhizosphereVDVVKIRRQGNSLGVTLDQRTLGEANLHEGDLVASSVRNGTIVLTPVDIRPRTLAVGRRVIEANRRVLDRLAKDERGK
Ga0105164_10002116183300009777WastewaterSMDVVKIRKQGNSLSVTLDQATLEAANLHEGDLVAPSVQKGVVVLTPVEIRPKVRPRVLQVGRRIIAENRRVLDRLAKGEGGRAATGRR*
Ga0105164_1003316023300009777WastewaterMDVVKIRRQGNSLSVTLDQETLGAANLREGDLVAPSVQKGVVILTPVEIRPKVRPQVLQVGRKVIGGNRRVLDRLAKNDTGQAAAGRR*
Ga0105164_1004467313300009777WastewaterSMDVVKIRKQGNSLSVTLDQATLEAANLHEGDLVAPSVQKGVVVLTPVEIRLKVRPRVLQVGRRIIAENRRVLDRLAKDQRGQAATDRR*
Ga0105164_1051031923300009777WastewaterMDVVKIRRQGNSLSVTLDQATLEAANLHEGDLVAPSVQKGIVVLTPVEIRPKVRPRVLQVGRRIIAENRRVLDRLAKGEGGRAA
Ga0134086_1007797523300010323Grasslands SoilMDVMKIRRQGNSLSVTLDQETLGAAHLGEGDLVTASVRNGAVVLTPVEIRPRVLDVGRKVISRNRRVLERLARDENRQAPAVRR*
Ga0134071_1015897213300010336Grasslands SoilVKIRRQGNSLAVTLDQETLDAARLREGDLVVPTVKAGVVVLTAVELRPRVLDAARRVIAENRRVLDRLRKV*
Ga0134071_1073626813300010336Grasslands SoilGGSNMAAVKIRRQGNSLAVTLDQETLDAAKLREGDLVVPTVKAGVVVLTPVELRPRVLEAGRRVIAENRRVLDRLGKA*
Ga0120157_111700723300011994PermafrostLDQETLDAANLHEGDLVAPSVQKGVVVLTPVEIRPKVRPQVLQLGRKIIAENRRALDRLSKDAAGRAAAGRR*
Ga0136621_111992223300012092Polar Desert SandVDAVKIRKQGNSLAVTIDQPTLTAANLHEGDLVVPSVQRGLIVLTPVEVRPKVRSRVLEVGRKVIKENRGALDGLAKGGSGQVTTGRR*
Ga0137389_1135451223300012096Vadose Zone SoilKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPKVIDAGRKVIAQNRSVLERLAKDDRGTGSGRR*
Ga0137374_1071996813300012204Vadose Zone SoilMDVVKIRKQGNSVSVTLDQEILRAANLHEGDLVAPSVQKGVVVLTPVEIRPKVRPQVLQLGRKIIAENRRVLDRLAKDSAGRVRTGRR*
Ga0137376_1000495283300012208Vadose Zone SoilMDVMKIRRQGNSLSVTLDQETLGAAHLSEGDLVSASVRNGAVVLTPVEIRPRVLEVGRKVIGRNRRVLERLAKD*
Ga0137377_1075810223300012211Vadose Zone SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVELRPKVVEAGRKVIAQNRSVLDRLAKDDRGTSSGRR*
Ga0137372_1018407033300012350Vadose Zone SoilMDVVKIRKQGNSVSVTLDQEILRAANLHEGDLVAPSVQKGVVVLTPVEIRPKVRPQVLQLGRKIIAENRRVLDRLAKDDAGRVTTGRR*
Ga0137369_1051298623300012355Vadose Zone SoilVNTVITKGGRRMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPKVVEAGRKVIAQNRAVLDRLAKDDRGVGSGRR*
Ga0137373_1037832013300012532Vadose Zone SoilSKRKRGMTKASGILREGDLVQPTVRGVVVLTPVEIRPRVIEAGRKVTAKNRSVIDRLAKDDRGAGTGRR*
Ga0137410_1048142033300012944Vadose Zone SoilCRRRFVEVVKIRRQGNSLSVTLDQDTLGAANLHEGDLVAPSVQKGVVVLTPVEIRPKVLQVGRRVISENRRALERLAKDESRRAATGRR*
Ga0134087_1032328223300012977Grasslands SoilMEVVKIRKQGNSLGVTLDQRTLGEAHLGEGDLVAPSVRNGTIVLTPVDIRPRTLAFGRRVIDRNRRVLDRLARDERRRPATGRR*
Ga0134075_1040521713300014154Grasslands SoilVKIRRQGNSLAVTLDQETLDAARLREGDLVVPTVKAGVVVLTPVELRPRVLDAGRRVTLENRRVLDRLRKV*
Ga0167657_100046843300015079Glacier Forefield SoilMDVLKIRKQGNSLTVTLDQQTLGAANLHEGDLVTPSVRNGTIVLTPVEIRPRALALGRKVIAENRRVLDRLAKDDTRKVASGRR*
Ga0183260_1002300663300017787Polar Desert SandVDAVKIRKQGNSLAVTIDQPTLTAANLHEGDLVVPSVQRGLIVLTPVEVRPKVRSRVLEVGRKVIKENRGALDGLAKGGSGQVTTGRR
Ga0184610_104947933300017997Groundwater SedimentMAAVKIRRQGNSLAVTIDQETLGAANLHEGDLVQATVRGGVVVLTPVEIRPKVIETGRRVIAQNRSVLDRLAKDDRGGGAGRR
Ga0184634_1007446533300018031Groundwater SedimentMPAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQATVRGGVVVLTPVEIRPKVIEAGRRVIAQNRSVLERLAKDDRGASAGRR
Ga0184632_1012162733300018075Groundwater SedimentMAAVKIRRQGNSLAVTLDQETLGAANLHEGDLVQPTVRGGVVVLTPVELRPKVIEAGRRVITQNRSVLDRLAKDDRGTSSARR
Ga0184609_1035362723300018076Groundwater SedimentMSAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQATVRGGVVVLTPVEIRPKVIETGRKVIAQNRSVLDRLANDDRGASTGRR
Ga0184639_1062747613300018082Groundwater SedimentMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQATVRGGVVVLTPVEIRPKVIETGRRVIAQNRSVLDRLAKDDRGASAGRR
Ga0066655_1001066143300018431Grasslands SoilMEVVKIRKQGNSLGVTLDQRTLGEAHLREGDLVAPSVRNGTIVLTPVDIRPRTLALGRRVIDQNRRVLDRLARDERRRPATGRR
Ga0066655_1014722433300018431Grasslands SoilMDVMKIRRQGNSLSVTLDQETLGAAHLSEGDLVTASVRNGAVVLTPVEIRPRVLDVGRKVISRNRRVLERLARDENRQAPAVRR
Ga0066655_1022760823300018431Grasslands SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPRVIEAGRRLIAQNRSVLQRLAKDDPGARAGRR
Ga0066667_1142392313300018433Grasslands SoilMDVMKIRRQGNSRSVTLDQETLGAAHLSEGDLVTATVRNGAVVLTPVEIRPRVLDVGRKVISRNRRVLERLAKDEYRKAPTVRR
Ga0066662_1029396823300018468Grasslands SoilVKIRRQGDSLAVTLDQETLDAAKLREGDLVVPTFKAGVVVLTPVELRPRVLDAGRRVTSENRRVLDRPRKV
Ga0066662_1132362423300018468Grasslands SoilMAAVKIRRQGNSLAVTLDQETLDAAKLREGDLVVPTVKAGVVVLTPVELRPRVLDAGRRVTSENRRVLDRLRKV
Ga0066669_1181356023300018482Grasslands SoilVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPRVIEAGRKLIAQNRSVLQRLAKDEPGARAGRR
Ga0210382_1003450523300021080Groundwater SedimentMDIMKIRRQGNSLSVTLDQETLGAARLREGDLVTATVRNGAVILTPVEIRPRVLDVGRKEIARNRRVLDRLAKEDVRQASTARR
Ga0210382_1034088313300021080Groundwater SedimentMTAVKIRRQGNSLAVTLDQETLGAANLREGDLVQPIVRGGVVVLTPVEIRPKVIDTGRKVIAQNRNVLDRLARDDRGASTGRR
Ga0210382_1047952413300021080Groundwater SedimentMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVELRPKVIEAGRKVIAQNRSVLDRLARDDRGTSSARR
Ga0222623_1001520633300022694Groundwater SedimentMAVNTVPTKEGQMPAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQATVRGGVVVLTPVEIRPKVIETGRKVIAQNRSVLDRLANDDRGASTGRR
Ga0209824_10001048203300025173WastewaterMDVVKIRRQGNSLSVTLDQATLEAANLHEGDLVAPSVQKGIVVLTPVEIRPKVRPRVLQVGRRIIAENRRVLDRLAKGEGGRAATGRR
Ga0209824_1001174733300025173WastewaterMDVVKIRRQGNSLSVTLDQETLGAANLREGDLVAPSVQKGVVILTPVEIRPKVRPQVLQVGRKVIGGNRRVLDRLAKNDTGQAAAGRR
Ga0209824_1002157323300025173WastewaterMDVVKIRKQGNSLSVTLDQATLEAANLHEGDLVAPSVQKGVVVLTPVEIRLKVRPRVLQVGRRIIAENRRVLDRLAKDQRGQAATDRR
Ga0207684_100000292433300025910Corn, Switchgrass And Miscanthus RhizosphereMDVVKIRRQGNSLSVTLDQATLDAANLHEGDLVAPSVQKGVVVLTPVEIRPKVRPRVLHVGRRIIAENRRVLDRLAKGDSREGSH
Ga0207684_1002385583300025910Corn, Switchgrass And Miscanthus RhizosphereVDAVKIRRQGNSLSVTLDQETLRHANLREGDRVAPTVRNGVVVLVPVEIRPRVLEVGRKVIARNRRVLDRLAKG
Ga0207684_1065019713300025910Corn, Switchgrass And Miscanthus RhizosphereMAAVKIRKQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVIVLTPVEIRPKVIDAGRKVIAQNRSVLERLAKDDRGTGSGRR
Ga0209236_128484913300026298Grasslands SoilMAAVKIRRQGNSLAVTLDQETLDAAKLREGDLVVPTVKAGVVVLTPVELRPRVLDAGRRVTLENRRVLDRLRKV
Ga0209471_101292653300026318SoilMDVMKIRRQGNSLSVTLDQETLGAAHLTEGDLVTASVRNGAVVLTPVEIRPRVLDVGRKVISRNRRVLERLARDENRQAPAVRR
Ga0209131_116873123300026320Grasslands SoilVEVVKIRRQGNSLSVTLDQDTLGAANLHEGDLVAPSVEKGIVMLTPVEIRPKVLQVGRRVISENRRALDRLAKDEPRRAATGRR
Ga0209377_124379123300026334SoilVKIRRQGNSLAVTLDQETLDAAKLREGDLVVPTVKAGVVVLTPVELRPRVLDAGRRVTSENRRVLDRPRK
Ga0209808_100589723300026523SoilMDVMKIRRQGNSLSVTLDQETLGAAHLSEGDLVTATVRNGAVVLTPVEIRPRVLDVGRKVISRNRRVLERLAKDEYRKAPTVRR
Ga0209160_115746523300026532SoilVKIRRQGNSLAVTLDQETLDAAKLREGDLVVPTVKAGVVVLTAVELRPRVLDAGRRVISENRRVLDRLRKV
Ga0209161_1003203633300026548SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPRVIEAGRKLIAQNRSVLQRLAKDDPGARAGRR
Ga0209388_101216933300027655Vadose Zone SoilMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPKVIDAGRKVIAQNRSVLERLAKDDRGTGSGRR
Ga0209011_120876623300027678Forest SoilMDVLKIRKQGNSLTVTLDQQTLGAANLHEGDLVTPSVRNGMIVLTPVEIRPRALALARKVIAENRRVLDRLAKDDTRKVASGRR
Ga0209514_1026208023300027819GroundwaterMDAVKIRRQGNSLSVTLDQETLGAANLHEGDLVAPSVHNGVVVLTPVEIRPKVRPQVLRVGRKIIAENRRVLDRLAKDSSGRAAADRR
Ga0209514_1040498913300027819GroundwaterMDVVKIRRQGNSLSVTLDQETLDAANLHEGDLVAPSVQKGVVVLTPVEIRPKVRPQVLRVGRKIIAENRRVLDRLANDDSGRAAAGR
Ga0209701_1015314923300027862Vadose Zone SoilMDAVKIRKQGNSLAVTLDQDVLAAANLREGDLVAPSVQKGVVVLTPVEIRPRVRPQVLQVGRKLISENRRALDRLAKDERGPTSAGRR
Ga0209283_1033411223300027875Vadose Zone SoilMAVNTVPEKGGPEMAAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQPTVRGGVVVLTPVEIRPKVIDAGRKVIAQNRSVLERLAKDDRGTGSGRR
Ga0209481_1000316623300027880Populus RhizosphereMSAVKIRRQGNSLAVTLDQDTLGAANLHEGDLVQATVRGGVVVLTPVEIRPKLIETGRRVIAQNRSVLDRLAKDDRGGSARRR
Ga0307277_1004410143300028881SoilVDVLKIRKQGNSLTVTLDQQTLSAANLHEGDLVTPSVRNGMVVLTPVEIRPRALALGRKVIAENRRVLDRLAKGDTRKVASGRR
Ga0307277_1005833313300028881SoilMTAVKIRRQGNSLAVTLDQETLGAANLREGDLVQPIVRGGVVVLTPVEIRPKVIETGRKVIAQNRSVLDRLARDDRGASTGRR
Ga0326597_1017625523300031965SoilMPAVKIRRQGNSLAVTLDQETLGAANLHEGDLVQPTVRGGVVVLTPVEIRPKVIEAGRRVIAQNRAVLDRLAKDDQGAGTGRR
Ga0326597_1170114913300031965SoilMESVKIRKQGNSLSVTLDQATLRAANLHEGDRVAPTVRNGVVTLVPVEIRPRVLEVGRKVISRNRRALDRLAK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.