Metagenome Family F096214

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096214
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	53 residues
Representative Sequence	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGFAFGG
Number of Associated Samples	72
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	57.14 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.48 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (85.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (65.714 % of family members)
Environment Ontology (ENVO)	Unclassified (96.190 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.238 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.08% β-sheet: 0.00% Coil/Unstructured: 51.92%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00924	MS_channel	72.38
PF07508	Recombinase	4.76
PF13385	Laminin_G_3	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	72.38
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	72.38
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	4.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
All Organisms	root	All Organisms	14.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Viruses	superkingdom	All Organisms → Viruses	13.33 %
cellular organisms	root	All Organisms → cellular organisms	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.33 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.33 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.33 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.33 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001450\|JGI24006J15134_10050375	All Organisms → Viruses → Predicted Viral	1705	Open in IMG/M
3300001450\|JGI24006J15134_10204071	Not Available	600	Open in IMG/M
3300001472\|JGI24004J15324_10091909	Not Available	798	Open in IMG/M
3300006735\|Ga0098038_1162415	Not Available	739	Open in IMG/M
3300006738\|Ga0098035_1167838	Not Available	741	Open in IMG/M
3300006751\|Ga0098040_1050137	Not Available	1298	Open in IMG/M
3300006751\|Ga0098040_1091527	Not Available	920	Open in IMG/M
3300006753\|Ga0098039_1130275	Not Available	862	Open in IMG/M
3300006754\|Ga0098044_1047458	Not Available	1838	Open in IMG/M
3300006754\|Ga0098044_1058689	Not Available	1624	Open in IMG/M
3300006754\|Ga0098044_1072967	All Organisms → Viruses → Predicted Viral	1431	Open in IMG/M
3300006754\|Ga0098044_1273884	Not Available	650	Open in IMG/M
3300006789\|Ga0098054_1046811	Not Available	1663	Open in IMG/M
3300006789\|Ga0098054_1073932	Not Available	1288	Open in IMG/M
3300006789\|Ga0098054_1206274	Not Available	715	Open in IMG/M
3300006793\|Ga0098055_1070221	All Organisms → Viruses → Predicted Viral	1386	Open in IMG/M
3300006793\|Ga0098055_1222025	Not Available	714	Open in IMG/M
3300006921\|Ga0098060_1137188	Not Available	681	Open in IMG/M
3300006923\|Ga0098053_1046613	Not Available	901	Open in IMG/M
3300006924\|Ga0098051_1051066	Not Available	1143	Open in IMG/M
3300006926\|Ga0098057_1126208	Not Available	624	Open in IMG/M
3300006926\|Ga0098057_1135587	Not Available	600	Open in IMG/M
3300006927\|Ga0098034_1164228	Not Available	624	Open in IMG/M
3300006928\|Ga0098041_1097206	Not Available	951	Open in IMG/M
3300006928\|Ga0098041_1285740	Not Available	525	Open in IMG/M
3300006990\|Ga0098046_1035846	All Organisms → Viruses → Predicted Viral	1197	Open in IMG/M
3300006990\|Ga0098046_1076812	Not Available	755	Open in IMG/M
3300007276\|Ga0070747_1027367	All Organisms → Viruses → Predicted Viral	2285	Open in IMG/M
3300007963\|Ga0110931_1005906	All Organisms → Viruses → Predicted Viral	3844	Open in IMG/M
3300007963\|Ga0110931_1022583	All Organisms → Viruses → Predicted Viral	1901	Open in IMG/M
3300008050\|Ga0098052_1120063	Not Available	1058	Open in IMG/M
3300008050\|Ga0098052_1189823	Not Available	801	Open in IMG/M
3300008050\|Ga0098052_1192237	Not Available	795	Open in IMG/M
3300008050\|Ga0098052_1335431	Not Available	568	Open in IMG/M
3300008050\|Ga0098052_1404918	Not Available	507	Open in IMG/M
3300008216\|Ga0114898_1112943	Not Available	804	Open in IMG/M
3300008216\|Ga0114898_1179738	Not Available	597	Open in IMG/M
3300008217\|Ga0114899_1135082	Not Available	811	Open in IMG/M
3300008218\|Ga0114904_1038448	Not Available	1294	Open in IMG/M
3300008218\|Ga0114904_1041328	Not Available	1236	Open in IMG/M
3300008219\|Ga0114905_1251390	Not Available	556	Open in IMG/M
3300008220\|Ga0114910_1058216	Not Available	1221	Open in IMG/M
3300009104\|Ga0117902_1347396	Not Available	1344	Open in IMG/M
3300009409\|Ga0114993_10845207	Not Available	658	Open in IMG/M
3300009414\|Ga0114909_1081106	Not Available	911	Open in IMG/M
3300009481\|Ga0114932_10877052	Not Available	518	Open in IMG/M
3300009602\|Ga0114900_1061329	Not Available	1117	Open in IMG/M
3300009605\|Ga0114906_1048619	Not Available	1622	Open in IMG/M
3300009605\|Ga0114906_1054446	Not Available	1516	Open in IMG/M
3300010150\|Ga0098056_1027024	Not Available	2023	Open in IMG/M
3300010150\|Ga0098056_1252207	Not Available	585	Open in IMG/M
3300010151\|Ga0098061_1016495	Not Available	3081	Open in IMG/M
3300010151\|Ga0098061_1070507	Not Available	1331	Open in IMG/M
3300010151\|Ga0098061_1145736	Not Available	860	Open in IMG/M
3300010151\|Ga0098061_1161368	Not Available	808	Open in IMG/M
3300010151\|Ga0098061_1337044	Not Available	514	Open in IMG/M
3300010153\|Ga0098059_1058832	Not Available	1539	Open in IMG/M
3300010153\|Ga0098059_1209876	Not Available	757	Open in IMG/M
3300010155\|Ga0098047_10029547	All Organisms → Viruses → Predicted Viral	2186	Open in IMG/M
3300012919\|Ga0160422_10930201	Not Available	561	Open in IMG/M
3300017697\|Ga0180120_10249507	Not Available	721	Open in IMG/M
3300017697\|Ga0180120_10313286	Not Available	626	Open in IMG/M
3300017703\|Ga0181367_1076885	Not Available	577	Open in IMG/M
3300017718\|Ga0181375_1074587	Not Available	553	Open in IMG/M
3300017733\|Ga0181426_1047694	Not Available	846	Open in IMG/M
3300017764\|Ga0181385_1030787	All Organisms → Viruses → Predicted Viral	1699	Open in IMG/M
3300017775\|Ga0181432_1309763	Not Available	501	Open in IMG/M
3300017782\|Ga0181380_1246848	Not Available	593	Open in IMG/M
3300020175\|Ga0206124_10223526	Not Available	737	Open in IMG/M
3300020477\|Ga0211585_10062233	All Organisms → Viruses → Predicted Viral	2687	Open in IMG/M
3300021791\|Ga0226832_10477519	Not Available	534	Open in IMG/M
3300025045\|Ga0207901_1044618	Not Available	590	Open in IMG/M
3300025066\|Ga0208012_1011373	All Organisms → Viruses → Predicted Viral	1568	Open in IMG/M
3300025070\|Ga0208667_1035611	Not Available	865	Open in IMG/M
3300025085\|Ga0208792_1041869	Not Available	879	Open in IMG/M
3300025096\|Ga0208011_1020976	Not Available	1682	Open in IMG/M
3300025096\|Ga0208011_1089932	Not Available	662	Open in IMG/M
3300025099\|Ga0208669_1049745	Not Available	962	Open in IMG/M
3300025101\|Ga0208159_1043300	Not Available	963	Open in IMG/M
3300025103\|Ga0208013_1009379	Not Available	3197	Open in IMG/M
3300025103\|Ga0208013_1053775	Not Available	1087	Open in IMG/M
3300025109\|Ga0208553_1026878	Not Available	1498	Open in IMG/M
3300025109\|Ga0208553_1037068	All Organisms → Viruses → Predicted Viral	1238	Open in IMG/M
3300025118\|Ga0208790_1018316	All Organisms → Viruses → Predicted Viral	2423	Open in IMG/M
3300025118\|Ga0208790_1027578	Not Available	1897	Open in IMG/M
3300025125\|Ga0209644_1064871	Not Available	846	Open in IMG/M
3300025128\|Ga0208919_1134123	Not Available	777	Open in IMG/M
3300025137\|Ga0209336_10097332	Not Available	836	Open in IMG/M
3300025141\|Ga0209756_1008169	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	7347	Open in IMG/M
3300025141\|Ga0209756_1164879	Not Available	878	Open in IMG/M
3300025151\|Ga0209645_1168491	Not Available	665	Open in IMG/M
3300025168\|Ga0209337_1159149	Not Available	967	Open in IMG/M
3300025247\|Ga0207880_1066959	Not Available	509	Open in IMG/M
3300025264\|Ga0208029_1043820	Not Available	969	Open in IMG/M
3300025270\|Ga0208813_1079195	Not Available	680	Open in IMG/M
3300025293\|Ga0208934_1041110	Not Available	866	Open in IMG/M
3300025300\|Ga0208181_1051076	Not Available	858	Open in IMG/M
3300025305\|Ga0208684_1024415	Not Available	1857	Open in IMG/M
3300025873\|Ga0209757_10265051	Not Available	546	Open in IMG/M
3300029319\|Ga0183748_1081849	Not Available	793	Open in IMG/M
3300029319\|Ga0183748_1093462	Not Available	707	Open in IMG/M
3300029448\|Ga0183755_1015683	All Organisms → Viruses → Predicted Viral	2703	Open in IMG/M
3300029448\|Ga0183755_1051331	Not Available	1035	Open in IMG/M
3300031811\|Ga0310125_10604125	Not Available	512	Open in IMG/M
3300032820\|Ga0310342_101039273	Not Available	963	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	84.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.76%
Coastal	Environmental → Aquatic → Marine → Coastal	3.81%
Strait	Environmental → Aquatic → Marine → Strait	3.81%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.95%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.95%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	83.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.76%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	3.81%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.95%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.95%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.95%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	65.71%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	16.19%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.76%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	3.81%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.90%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.95%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.95%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.95%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.95%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.95%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.95%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.95%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008218	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009602	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental	Open in IMG/M
3300017733	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020477	Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300025045	Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)	Environmental	Open in IMG/M
3300025066	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025247	Marine viral communities from the Deep Pacific Ocean - MSP-91 (SPAdes)	Environmental	Open in IMG/M
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental	Open in IMG/M
3300025270	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)	Environmental	Open in IMG/M
3300025293	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)	Environmental	Open in IMG/M
3300025300	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)	Environmental	Open in IMG/M
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031811	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24006J15134_100503754	3300001450	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGLAFGGVGLYVGYYYDTVVT
JGI24006J15134_102040712	3300001450	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFVRYIEWVWFKRCVWLLGIGLAFGGVGLYV
JGI24004J15324_100919091	3300001472	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGLAFGGVGLYVGYY
Ga0098038_11624152	3300006735	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLMGIGLAFGGIGL
Ga0098035_11678381	3300006738	Marine	MKFLRNMLFSTARYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGLSLGFGGV
Ga0098040_10501373	3300006751	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFVRYIEWMWFKRCMWLLGIGLGFGGVGL
Ga0098040_10915271	3300006751	Marine	MKFIRNMLFATGRYPSTMGAGGQQDVEFCRYIEWVWFKRCV
Ga0098039_11302751	3300006753	Marine	MLFTTSRYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGVSLAFGGIGLYVGYYYDEVVL
Ga0098044_10474584	3300006754	Marine	MLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLV
Ga0098044_10586891	3300006754	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGIGLGFGGVGLYI
Ga0098044_10729671	3300006754	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLVGIGFGLGGV
Ga0098044_12738841	3300006754	Marine	MKFIRNMLFATGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGLAFGGVGLYIGYYYEEVVLDYGMAI
Ga0098054_10468114	3300006789	Marine	MLFSTGRYPSTMGARGQQDVEFCRYIEWVWFKRCVWLLGIGFALGG
Ga0098054_10739323	3300006789	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLVGIGFGLGGVGLYLGYYYD
Ga0098054_12062741	3300006789	Marine	MKLIRNMLFGTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCMWLLGIGFAFGGIGLYVGYYYETVVA
Ga0098055_10702211	3300006793	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLVG
Ga0098055_12220252	3300006793	Marine	MRFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGFAFGGIGLYVGYY
Ga0098060_11371881	3300006921	Marine	MKFIRNMLFATGRYPSTMGAGGQQDVEFCRYIEWVWFKRC
Ga0098053_10466132	3300006923	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKR
Ga0098051_10510661	3300006924	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLVGIGFGLGGVGLYLG
Ga0098057_11262082	3300006926	Marine	MRFIRNMMFGTARYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGVSLAFGGVGLYVGYYYDEVVLEYGMM
Ga0098057_11355872	3300006926	Marine	MKFIRNMLFTTGRYPSTMGAGGQQDVEFCRYIEWVWFK
Ga0098034_11642281	3300006927	Marine	MKFLRNMLFSTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMMLLGLSLGFAGIGLYVGYYYDEVVLEYGMM
Ga0098041_10972062	3300006928	Marine	MKFIRNMLFTTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGVGLGFGGIG
Ga0098041_12857402	3300006928	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLMGIGLAFGGIG
Ga0098046_10358461	3300006990	Marine	MRFIRNMLFGTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLM
Ga0098046_10768121	3300006990	Marine	MRFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLMGTA
Ga0070747_10273675	3300007276	Aqueous	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLMGTAFAFGGIGLYVGYYYDSV
Ga0110931_10059061	3300007963	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVDFCRYIEWMWFK
Ga0110931_10225831	3300007963	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLVGIGFG
Ga0098052_11200633	3300008050	Marine	MKFIRNMLFATGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGL
Ga0098052_11898232	3300008050	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFVRYIEWVWFKRCMWLLGVCFAFGGIGLYVGYYYDEVVL
Ga0098052_11922372	3300008050	Marine	MKFIRNMLFATGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLG
Ga0098052_13354311	3300008050	Marine	MKFIRNMLFATGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGI
Ga0098052_14049181	3300008050	Marine	MKFIRNMLFTTGRYPSTMGAGGQQDVEFCRYIEWV
Ga0114898_11129432	3300008216	Deep Ocean	MKILRNMLFGTARYPSTMGAGGQQDVDFCRYIEWMWFKRCMMLLGLSLAFGGVGLYVGYY
Ga0114898_11797381	3300008216	Deep Ocean	MKFLRNMLFGTARYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLVGGIIGGAGMG
Ga0114899_11350821	3300008217	Deep Ocean	MKFIRNMLFGTARYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLVGGIIGGAGMGLYVGYFYDDVVVEYGM
Ga0114904_10384481	3300008218	Deep Ocean	MKFIRNMLFATGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGFGFGGVG
Ga0114904_10413281	3300008218	Deep Ocean	MKFIRNMLFSTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGIGLGFGGVGLYIGYY
Ga0114905_12513902	3300008219	Deep Ocean	MRFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLMGTAFAFGGIGLYVGYY
Ga0114910_10582163	3300008220	Deep Ocean	MKFIRNMLFSTGRYPSTMGAGGQQDVEFVRYIEWVWFKRCMWLLGLGFAFGGVGL
Ga0117902_13473963	3300009104	Marine	MRFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCMWLLGLGFAFVGV
Ga0114993_108452071	3300009409	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCVWLLGMGLGFA
Ga0114909_10811062	3300009414	Deep Ocean	MKILRNMLFGTARYPSTMGAGGQQDVDFCRYIEWMWFKRCMMLLGLSLAFGGVGLYVGYYYDEVVLE
Ga0114932_108770521	3300009481	Deep Subsurface	MRFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRC
Ga0114900_10613293	3300009602	Deep Ocean	MKFIRNMLFGTARYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLVGGIIGAAGIGLYVGYFYDDVVVEYG
Ga0114906_10486191	3300009605	Deep Ocean	MKILRNMLFGTARYPSTMGAGGQQDVDFCRYIEWMWFKRCMMLLGLSLAFGGVGLYV
Ga0114906_10544464	3300009605	Deep Ocean	MKFIRNMLFGTARYPSTMGAGGQQDVDFCRYIEWMWFKRC
Ga0098056_10270245	3300010150	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLVGIGFGL
Ga0098056_12522071	3300010150	Marine	MRFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLMGIGLAFGGVGLYVG
Ga0098061_10164951	3300010151	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLV
Ga0098061_10705073	3300010151	Marine	MKFIRNMLFTTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGVGLGLGGIGLYIGYYYDDVVT
Ga0098061_11457361	3300010151	Marine	MKFIRNMLFGTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLVGIGFGLGGVGLYLGYY
Ga0098061_11613681	3300010151	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGIGLGFG
Ga0098061_13370441	3300010151	Marine	MKFIRNMLFATGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGVGLGFGGVGLYVGYYYEE
Ga0098059_10588321	3300010153	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWV
Ga0098059_12098761	3300010153	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLVGIGFGLGGVGLYLGYYYDTVVTEY
Ga0098047_100295471	3300010155	Marine	MKFIRNMLFTTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGVSL
Ga0160422_109302011	3300012919	Seawater	MKLIRNILFATGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLM
Ga0180120_102495072	3300017697	Freshwater To Marine Saline Gradient	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGFAFGG
Ga0180120_103132862	3300017697	Freshwater To Marine Saline Gradient	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRC
Ga0181367_10768851	3300017703	Marine	MKFLRNMLFSTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMMLLGLSLGFAGIGLYVGYYYDEVVLEYGMMI
Ga0181375_10745871	3300017718	Marine	MKFIRNMLFATGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGLGFGG
Ga0181426_10476942	3300017733	Seawater	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGFAFGGIGLYVGYYYDEVVTEYGMAVW
Ga0181385_10307871	3300017764	Seawater	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVW
Ga0181432_13097631	3300017775	Seawater	MKFIRNMLFTTTRYPSTMGAGGQQDVDFCRYIEWMWFKRCMMLLGVCLAFGGVGLYVGYYYDEVV
Ga0181380_12468482	3300017782	Seawater	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGFAFGGVGLYVGYYYDEVVT
Ga0206124_102235262	3300020175	Seawater	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGFAFGGVGLYVGYYYDTVVTE
Ga0211585_100622335	3300020477	Marine	MRFIRNMLFSTNRYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGVGFGLGGIGLYIGYYYDEVVLEY
Ga0226832_104775191	3300021791	Hydrothermal Vent Fluids	MRFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGLGFGGVGLYVGYYYE
Ga0207901_10446181	3300025045	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFVRYIEWVWFKRCMWLLG
Ga0208012_10113734	3300025066	Marine	MLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLVGIGFG
Ga0208667_10356111	3300025070	Marine	MRFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLMGIGLAFGGVGL
Ga0208792_10418692	3300025085	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLVGIGFGLGGVG
Ga0208011_10209764	3300025096	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGIGLGFGGVGLYIGYYYEEVVLEYG
Ga0208011_10899322	3300025096	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCIWLLGMGFGLG
Ga0208669_10497451	3300025099	Marine	MRFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLG
Ga0208159_10433001	3300025101	Marine	MRFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLMGTAFAFGGIGLYVGYYYDSVVTEYGMA
Ga0208013_10093795	3300025103	Marine	MKFIRNMLFATGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGLAFGGVGLYIGYYYEEVVLEYGMAI
Ga0208013_10537751	3300025103	Marine	MKFIRNMLFATGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGLGF
Ga0208553_10268784	3300025109	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGIGLGF
Ga0208553_10370681	3300025109	Marine	MKFLRNMLFSTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMML
Ga0208790_10183161	3300025118	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLG
Ga0208790_10275784	3300025118	Marine	MLFSTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGIGLGFGGVGL
Ga0209644_10648712	3300025125	Marine	MKFIRNMLFTTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMMLLGLSLGFAGIGLYVGYYYDEV
Ga0208919_11341232	3300025128	Marine	MKFIRNMLFTTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGVGLGLGGVGLY
Ga0209336_100973322	3300025137	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGLAFGGVGLYVGYYYDTVVTEYG
Ga0209756_10081695	3300025141	Marine	MKFIRNMLFTTGRYPSTMGAGGQQDVDFCRYIEWMWFK
Ga0209756_11648791	3300025141	Marine	MKFIRNMLFTTSRYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGVSLAFGGIGLYVGYY
Ga0209645_11684911	3300025151	Marine	MLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLMGLGFAFGGIGLYV
Ga0209337_11591492	3300025168	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFVRYIEWVWFKRCVWLLGIGLAFGGVGLYVGYYYE
Ga0207880_10669592	3300025247	Deep Ocean	MRFIRNMLFSTRRYPSTMGAGGQQDVDFCRYIEWMWFKRC
Ga0208029_10438201	3300025264	Deep Ocean	MKFIRNMLFATGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGLGFGGIGLYVGYY
Ga0208813_10791952	3300025270	Deep Ocean	MKFIRNMLFGTARYPSTMGAGGQQDVDFCRYIEWMWFKRCMM
Ga0208934_10411102	3300025293	Deep Ocean	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGIGFAFGGVG
Ga0208181_10510761	3300025300	Deep Ocean	MKFIRNMLFSTGRYPSTMGAGGQQDVDFCRYIEWM
Ga0208684_10244151	3300025305	Deep Ocean	MKFLRNMLFGTARYPSTMGAGGQQDVDFCRYIEWMW
Ga0209757_102650511	3300025873	Marine	MKFIRNMLFTTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGVS
Ga0183748_10818492	3300029319	Marine	MRFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWIMGLGLAFGGLGLYVGYY
Ga0183748_10934621	3300029319	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLMGL
Ga0183755_10156831	3300029448	Marine	MKFIRNMLFSTGRYPSTMGAGGQQDVEFCRYIEWVWF
Ga0183755_10513313	3300029448	Marine	MKFIRNMLFATGRYPSTMGAGGQQDVEFCRYIEWVWFK
Ga0310125_106041252	3300031811	Marine	MKFIRNMLFTTGRYPSTMGAGGQQDVEFCRYIEWVWFKRCVWLLGISFAFAGVGLYVGYY
Ga0310342_1010392732	3300032820	Seawater	MKFIRNMLFTTGRYPSTMGAGGQQDVDFCRYIEWMWFKRCMWLLGVSLAFGGI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096214

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences