Metagenome / Metatranscriptome Family F096205

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096205
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	70 residues
Representative Sequence	MSKGDKPRPLSVSYKEYSDNYEAIFGRKDSKDTDNTLNLTEEEEIEAEKRINIIGQNGNDGLHYDKVDGES
Number of Associated Samples	71
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.05 %
% of genes near scaffold ends (potentially truncated)	20.95 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (46.667 % of family members)
Environment Ontology (ENVO)	Unclassified (85.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (88.571 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.26% β-sheet: 0.00% Coil/Unstructured: 73.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF07583	PSCyt2	14.29
PF01510	Amidase_2	12.38
PF07587	PSD1	11.43
PF08241	Methyltransf_11	0.95
PF13505	OMP_b-brl	0.95
PF00268	Ribonuc_red_sm	0.95
PF04773	FecR	0.95
PF01531	Glyco_transf_11	0.95
PF07394	DUF1501	0.95
PF04542	Sigma70_r2	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0208	Ribonucleotide reductase beta subunit, ferritin-like domain	Nucleotide transport and metabolism [F]	0.95
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.95
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.95
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.95
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.19 %
Unclassified	root	N/A	23.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.33 %
Unclassified	root	N/A	23.81 %
Viruses	superkingdom	All Organisms → Viruses	2.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.33 %
Unclassified	root	N/A	23.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.86 %

Name	Rank	Taxonomy	Distribution
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	35.24 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	25.71 %
Unclassified	root	N/A	23.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.86 %

Name	Rank	Taxonomy	Distribution
Nitrospinae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae	35.24 %
Unclassified	root	N/A	23.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	15.24 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	10.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.86 %

Name	Rank	Taxonomy	Distribution
unclassified Nitrospinota	no rank	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota	35.24 %
Unclassified	root	N/A	23.81 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	15.24 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	10.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.86 %

Name	Rank	Taxonomy	Distribution
Nitrospinae bacterium SCGC AAA008-D05	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	35.24 %
Unclassified	root	N/A	23.81 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	15.24 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	10.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.86 %

Name	Rank	Taxonomy	Distribution
Nitrospinae bacterium SCGC AAA008-D05	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	35.24 %
Unclassified	root	N/A	23.81 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	15.24 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	10.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.86 %

Name	Rank	Taxonomy	Distribution
Nitrospinae bacterium SCGC AAA008-D05	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	35.24 %
Unclassified	root	N/A	23.81 %
Roseibacillus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus	15.24 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	10.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.86 %

Name	Rank	Taxonomy	Distribution
Nitrospinae bacterium SCGC AAA008-D05	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	35.24 %
Unclassified	root	N/A	23.81 %
unclassified Roseibacillus	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus	15.24 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	10.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.86 %

Name	Rank	Taxonomy	Distribution
Nitrospinae bacterium SCGC AAA008-D05	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	35.24 %
Unclassified	root	N/A	23.81 %
Roseibacillus sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	15.24 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	10.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559018\|JCVI_READ_1310035	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	989	Open in IMG/M
3300001450\|JGI24006J15134_10116585	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	930	Open in IMG/M
3300001460\|JGI24003J15210_10040260	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1628	Open in IMG/M
3300001472\|JGI24004J15324_10155981	Not Available	522	Open in IMG/M
3300001966\|GOS2245_1028204	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300001967\|GOS2242_1000136	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300002231\|KVRMV2_101462904	Not Available	797	Open in IMG/M
3300002488\|JGI25128J35275_1008635	All Organisms → Viruses → Predicted Viral	2705	Open in IMG/M
3300002488\|JGI25128J35275_1016666	All Organisms → Viruses → Predicted Viral	1855	Open in IMG/M
3300005433\|Ga0066830_10080215	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	683	Open in IMG/M
3300006735\|Ga0098038_1000413	All Organisms → cellular organisms → Bacteria	19089	Open in IMG/M
3300006735\|Ga0098038_1183357	Not Available	684	Open in IMG/M
3300006735\|Ga0098038_1186780	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300006735\|Ga0098038_1190685	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300006735\|Ga0098038_1226104	Not Available	598	Open in IMG/M
3300006735\|Ga0098038_1233514	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	585	Open in IMG/M
3300006735\|Ga0098038_1244471	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	568	Open in IMG/M
3300006752\|Ga0098048_1172638	Not Available	641	Open in IMG/M
3300006789\|Ga0098054_1188111	Not Available	755	Open in IMG/M
3300006789\|Ga0098054_1189003	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	753	Open in IMG/M
3300006793\|Ga0098055_1308951	Not Available	590	Open in IMG/M
3300006921\|Ga0098060_1156777	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	630	Open in IMG/M
3300006924\|Ga0098051_1094138	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	806	Open in IMG/M
3300006929\|Ga0098036_1265872	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	518	Open in IMG/M
3300007963\|Ga0110931_1081178	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	979	Open in IMG/M
3300007963\|Ga0110931_1161762	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	671	Open in IMG/M
3300008219\|Ga0114905_1061788	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	1355	Open in IMG/M
3300009481\|Ga0114932_10056535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	2504	Open in IMG/M
3300009481\|Ga0114932_10089755	Not Available	1921	Open in IMG/M
3300009481\|Ga0114932_10171973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	1325	Open in IMG/M
3300009679\|Ga0115105_10023180	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	594	Open in IMG/M
3300009679\|Ga0115105_10027131	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1009	Open in IMG/M
3300009679\|Ga0115105_11018824	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1157	Open in IMG/M
3300009703\|Ga0114933_10072678	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	2461	Open in IMG/M
3300009703\|Ga0114933_10421707	Not Available	873	Open in IMG/M
3300009703\|Ga0114933_10607971	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	704	Open in IMG/M
3300009703\|Ga0114933_11014267	Not Available	525	Open in IMG/M
3300009790\|Ga0115012_10725941	Not Available	799	Open in IMG/M
3300010148\|Ga0098043_1214608	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	530	Open in IMG/M
3300010149\|Ga0098049_1063359	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1171	Open in IMG/M
3300010149\|Ga0098049_1276220	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	508	Open in IMG/M
3300010150\|Ga0098056_1124614	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	874	Open in IMG/M
3300010151\|Ga0098061_1325073	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	526	Open in IMG/M
3300011013\|Ga0114934_10065001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	1839	Open in IMG/M
3300011013\|Ga0114934_10395670	Not Available	616	Open in IMG/M
3300012920\|Ga0160423_10103986	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	2007	Open in IMG/M
3300012920\|Ga0160423_10558829	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	776	Open in IMG/M
3300012928\|Ga0163110_10077867	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300012936\|Ga0163109_10068219	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	2604	Open in IMG/M
3300012953\|Ga0163179_10916305	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	759	Open in IMG/M
3300012954\|Ga0163111_10160078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	1914	Open in IMG/M
3300012954\|Ga0163111_11108379	Not Available	769	Open in IMG/M
3300017708\|Ga0181369_1025807	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1405	Open in IMG/M
3300017720\|Ga0181383_1011158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	2400	Open in IMG/M
3300017730\|Ga0181417_1011601	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	2264	Open in IMG/M
3300017732\|Ga0181415_1014863	Not Available	1827	Open in IMG/M
3300017738\|Ga0181428_1043462	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1046	Open in IMG/M
3300017753\|Ga0181407_1183463	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	510	Open in IMG/M
3300017757\|Ga0181420_1173984	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	634	Open in IMG/M
3300017758\|Ga0181409_1230780	Not Available	528	Open in IMG/M
3300017763\|Ga0181410_1042923	All Organisms → Viruses → Predicted Viral	1410	Open in IMG/M
3300017764\|Ga0181385_1152724	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	701	Open in IMG/M
3300017779\|Ga0181395_1025768	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1997	Open in IMG/M
3300020403\|Ga0211532_10162079	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	911	Open in IMG/M
3300020404\|Ga0211659_10154508	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300020410\|Ga0211699_10349148	Not Available	581	Open in IMG/M
3300020411\|Ga0211587_10214977	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	802	Open in IMG/M
3300020446\|Ga0211574_10124198	Not Available	1130	Open in IMG/M
3300020451\|Ga0211473_10035147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	2491	Open in IMG/M
3300020451\|Ga0211473_10086164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	1598	Open in IMG/M
3300020471\|Ga0211614_10029682	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	2273	Open in IMG/M
3300022074\|Ga0224906_1031547	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1807	Open in IMG/M
3300024344\|Ga0209992_10061757	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1755	Open in IMG/M
3300024346\|Ga0244775_11375752	Not Available	544	Open in IMG/M
3300025086\|Ga0208157_1003818	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	5754	Open in IMG/M
3300025086\|Ga0208157_1015586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	2403	Open in IMG/M
3300025099\|Ga0208669_1045675	Not Available	1015	Open in IMG/M
3300025101\|Ga0208159_1021761	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1540	Open in IMG/M
3300025101\|Ga0208159_1040650	Not Available	1006	Open in IMG/M
3300025102\|Ga0208666_1038802	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1395	Open in IMG/M
3300025110\|Ga0208158_1017677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	1889	Open in IMG/M
3300025120\|Ga0209535_1010543	All Organisms → cellular organisms → Bacteria	5216	Open in IMG/M
3300025120\|Ga0209535_1030246	All Organisms → cellular organisms → Bacteria	2571	Open in IMG/M
3300025120\|Ga0209535_1120431	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	894	Open in IMG/M
3300025127\|Ga0209348_1002822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	8021	Open in IMG/M
3300025127\|Ga0209348_1059510	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300025128\|Ga0208919_1032964	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1863	Open in IMG/M
3300025132\|Ga0209232_1037626	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	1823	Open in IMG/M
3300025132\|Ga0209232_1112244	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	908	Open in IMG/M
3300025132\|Ga0209232_1243100	Not Available	524	Open in IMG/M
3300025137\|Ga0209336_10149071	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	619	Open in IMG/M
3300025141\|Ga0209756_1001788	All Organisms → cellular organisms → Bacteria	19416	Open in IMG/M
3300025151\|Ga0209645_1000490	All Organisms → cellular organisms → Bacteria	20278	Open in IMG/M
3300025280\|Ga0208449_1137737	Not Available	539	Open in IMG/M
3300025305\|Ga0208684_1037405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	1398	Open in IMG/M
3300028022\|Ga0256382_1005519	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	2147	Open in IMG/M
3300028022\|Ga0256382_1055742	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	925	Open in IMG/M
3300029319\|Ga0183748_1000006	Not Available	170908	Open in IMG/M
3300029319\|Ga0183748_1034669	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1584	Open in IMG/M
3300029319\|Ga0183748_1043034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.	1340	Open in IMG/M
3300029319\|Ga0183748_1064572	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	968	Open in IMG/M
3300029319\|Ga0183748_1105975	Not Available	635	Open in IMG/M
3300029319\|Ga0183748_1136150	Not Available	506	Open in IMG/M
3300029448\|Ga0183755_1091384	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	621	Open in IMG/M
3300029787\|Ga0183757_1001926	All Organisms → cellular organisms → Bacteria	8526	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	57.14%
Unclassified	Environmental → Aquatic → Marine → Unclassified	19.05%
Strait	Environmental → Aquatic → Marine → Strait	10.48%
Volcanic	Environmental → Aquatic → Marine → Volcanic	9.52%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.95%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	51.43%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	19.05%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	10.48%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	9.52%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	5.71%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.95%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	46.67%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	18.10%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	10.48%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	9.52%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	5.71%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.86%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.90%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.95%
Environmental And Host-Associated	Environmental → Aquatic → Marine → Oceanic → Unclassified → Environmental And Host-Associated	0.95%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.95%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.95%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559018	Marine microbial communities from the Atlantic Ocean, for comparison studies - Ocean6 (GOS4441574)	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001966	Marine microbial communities from Roca Redonda, Equador - GS030	Environmental	Open in IMG/M
3300001967	Marine microbial communities from Devil's Crown, Floreana Island, Equador - GS027	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300005433	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45B	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009679	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020446	Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ocean6-_02297070	2166559018	Environmental And Host-Associated	MSKGDKPRPLSVSYKQYSDNYEAIFGKKDKTDEHVLYNGLTEEEKPQAEKRIDIIGSKW
JGI24006J15134_101165852	3300001450	Marine	MSKGDKPRPLSVSYKKYTDNYEAIFGKKDDIEPDNTLNLTAEEELQAEKRINIIGQNGNDGLHYDKIDEEP*
JGI24003J15210_100402604	3300001460	Marine	MSKGDKPRPLSISYKKYIDNYEAIFGKKDDIEPDSTLNLTKEEEIRAEKRINIIGQNGNDGLHYDKVDGES*
JGI24004J15324_101559812	3300001472	Marine	MSKGDKPRPLSISYKKYIDNYEAIFGKKDDIEPDSTLNLTKEEEIRAEKRINIIGQNGNDGLHYDKVDGESIYTTARS
GOS2245_10282043	3300001966	Marine	MSKGDKPRPLSVSYKEYSDNYEAIFGRKDSKDTDNILNLTEEEEIEAEKRMDIIGQNGNDGLHYDKVDGES*
GOS2242_10001361	3300001967	Marine	PLSVSYDEYSDRYDAIFGRKGDKDTDNTLNLTEEEEIEAEKRINIIGQNGNDGLHYDKVDGES*
KVRMV2_1014629044	3300002231	Marine Sediment	MSKGAKPRPLSVSYKQYSDNYDAIFGKKDETDENVLYDGLTEEEVTEAEKRIDIIGRNGNDGLHYDEVDGESIYISARSKNVG
JGI25128J35275_10086354	3300002488	Marine	MSKGDKPRPLSVSYKEYSDNYEAIFGRKDSKDTDNTLNLTEEEEIEAEKRINIIGQNGNDGLHYDKVDGES*
JGI25128J35275_10166662	3300002488	Marine	MGKGDKPRPLSISYEEYANRYDAIYGKKDNKDKESLLDLTEEEEIKAEKRINIIGQNGNDGLHYDEVDGES*
Ga0066830_100802152	3300005433	Marine	MSKGDKPRPLSVSYKQYSDNYEAIFGKKEIAEEPTIYDGLTEEEELKAEKRMDVIGQNGNDGLHYDKVDGES*
Ga0098038_10004139	3300006735	Marine	MSKGDKPRPLSISYQQYSDNYEAIFGRKDNKDTDNTLNLTKEEEAEAEKRIDIIGQNGNDGLHYEEVDGES*
Ga0098038_11833572	3300006735	Marine	MSKGDKPRPLSVSYQQYSDNYEAIFGNKDKQQILYEDFTEEEIEEAEKRIDIIGQNGNDGLHYDEVDGES*
Ga0098038_11867802	3300006735	Marine	MGKGDKPRPLSISYEEYANRYDTIYGKKDSKDKESLLNLTEEEEIEAEKRINIIGQNGNDGLHYDEVDGES*
Ga0098038_11906852	3300006735	Marine	MSKGDKPRPLSVSYKKYIDNYEAIFGKKDKESLLNLTEEEEIEAEKRINIIGQNGNDGLHYDEVDGES*
Ga0098038_12261042	3300006735	Marine	MSKGDKPRPLSIPYKEYTDRYENIFGKKDTEGILDLTEEEEIEAERRMDIIGKNGNDGLHYEEQDEES*
Ga0098038_12335142	3300006735	Marine	MGKGDKPRPLSISYEEYANRYDAIYGKKDNKDKESLLNLTEEEEIEAEKRINIIGQNGNDGLHYDEVDGES*
Ga0098038_12444712	3300006735	Marine	MSKGSKPRPLSVSYDEYSDRYDAIFGRKDDKDTDNTLNLTEEEEIEAEKRINIIGQNGNDGLHYDKVDGES*
Ga0098048_11726382	3300006752	Marine	MSKGDKPRPLSISYQQYRDNYEAIFGRKDNKDTDNTLNLTKEEEAEAEKRIDIIGQNGNDGLHYEEVDGES*
Ga0098054_11881114	3300006789	Marine	SCWYNIPMSKGDKPRPLSVSYEEYSDRYEAIFGKKYTADEQPLYDGLSEEEVAEAEKRIDIIGQNGNDGLHYDEVDGES*
Ga0098054_11890032	3300006789	Marine	MSKGDKPRPLSISYQQYSDNYEAIFGKKELEEDINSIEMTEKEEEAAEKRIDVIGQNGNDGLHYEEVDGES*
Ga0098055_13089513	3300006793	Marine	LSVSYEEYSDRYEAIFGKKDTAEENALYDGLGGDIEQELEAEKRIDIIGQNGNDGLHYDEVDGES*
Ga0098060_11567772	3300006921	Marine	MGKGDKPRPLSISYEEYANRYDAIYGKKDNKDKESLLNLTEEEEIEAEKRINIIGQNGNDGLHYDEVDGESIYTTGGS
Ga0098051_10941382	3300006924	Marine	MSKGDKPRPLSVSYEEYSDRYEAIFGKKYTADEQPLYDGLSEEEVAEAEKRIDIIGQNGNDGLHYDEVDGES*
Ga0098036_12658722	3300006929	Marine	MSKGDKPRPLSISYEEYANRYDTIYGKKDSKDKESLLNLTEEEEIEAEKRINIIGQNGNDGLHYEEVDGES*
Ga0110931_10811783	3300007963	Marine	MGKGDKPRPLSVSYEEYSDRYEAIFGKKYTADEQPLYDGLSEEEVAEAEKRIDIIGQNGNDGLHYDEVDGES*
Ga0110931_11617621	3300007963	Marine	MSKGDKPRPLSVSYQQYSDNYEAIFGNKDKQQILYEDFTEEEIEEAEKRIDIIGQNGNDGLHYD
Ga0114905_10617884	3300008219	Deep Ocean	MSKGDKPRPLSVSYEEYSKKWDDIFGKKDTTEDNILYDGLGSDLEQELEAEKRIDIIGKNGNDGLHYDNIDGES*
Ga0114932_100565354	3300009481	Deep Subsurface	MSKGAKPRPLSVLYKQYSDNYDAIFGKKDETDENVLYDGLTEEEVTEAEKRIDIIGRNGNDGLHYDEVDGES*
Ga0114932_100897552	3300009481	Deep Subsurface	MSKGDKPRPLSVSYDEYSRKWDDIFGKKDTAEENVLYDGLGTDIEQELEAEARINIIGKNGNDGLHYDEVDGES*
Ga0114932_101719734	3300009481	Deep Subsurface	SVSYKEYSERYEAIFGKKDSDIDSIDGITMSAEEEKEAEKRMNIIGQNGNDGTHYCEVDGES*
Ga0115105_100231802	3300009679	Marine	MSKGAKPRPLSVSYKQYSDNYEAIFGKKDETDENVLYDGLTEEEVTEAEKRIDIIGQNGNDGLHYDEVDGES*
Ga0115105_100271313	3300009679	Marine	MSKGDKPRPLSVSYKQYSDNYEAIFGKKDNTYDHDHVLYNGLTEEEVAEAEKRIDIIGQNGNNGLHYEEVDGES*
Ga0115105_110188243	3300009679	Marine	MSKGQQPRPLSISYKQYSDNYEAIFGKKELEEDINSIDMTDKEEEAAEERMKVIGQNGNDGLHYDEVDGES*
Ga0114933_100726784	3300009703	Deep Subsurface	MSKGDKPRPLSVSYKEYSERYEAIFGKKDSDIDSIDGITMSAEEEKEAEKRMNIIGQNGNDGTHYCEVDGES*
Ga0114933_104217072	3300009703	Deep Subsurface	MSKGDKPRPLSVSYQQYSDNYEAIFGKKDTQQALYDGLTEEEVAAAEKRIDVIGQNGNDGLHYEEVDGES*
Ga0114933_106079712	3300009703	Deep Subsurface	MSKGDKPRPLSVSYKQYSDNYEAIFGKRDETNENVLYDGLTEEEVAEAEKRIDIIGQNGNDGLHYDEVDGES*
Ga0114933_110142671	3300009703	Deep Subsurface	MSKGAKPRPLSVSYKQYSDNYDAIFGKKDETDENVLYDGLTEEEVTEAEKRIDIIGRNGNDGLHYDEVDGES*
Ga0115012_107259411	3300009790	Marine	MSKGDKPRPLSVSYKQYSDNYEAIFGKEKVEVIDGMQPTEEEKALWDEEQSEKRIDIIGQNGNDGLHYDEVDGES*
Ga0098043_12146081	3300010148	Marine	MSKGDKPRPLSVSYKEYSDNYEAIFGRKDSKDTDNTLNLTEEEEIEAEKRMDIIGQNGNDGLHYDKVDGES*
Ga0098049_10633593	3300010149	Marine	MGKGDKPRPLSISYEEYANRYDAIYGKRDNKDKESLLNLTEEEEIEAEKRINIIGQNGNDGLHYDEVDGES*
Ga0098049_12762202	3300010149	Marine	MSKGDKPRPLSVSYKQYSDNYEAIFGKEEVEVINGMLPTEEEKALWDEEQSEKRIDILGQNGNDGLHYDEVDGES*
Ga0098056_11246143	3300010150	Marine	MSKGDKPRPLSISYQQYSDNYEAIFGRKDNKDTDNTLNLTKEEEAEAEKRIDIIGQNGNDGLHYEEVDG
Ga0098061_13250732	3300010151	Marine	MGKGDKPRPLSVSYEEYSDRYEAIFGKKDESKDLPITEEEEIKAEKRIDIIGQNGNDGLHYDEVDGQS*
Ga0114934_100650012	3300011013	Deep Subsurface	MSKGDKPRPLSVSYKQYSDNYEAIFGKRDETNENVLYDGLTEEEVTEAEKRIDIIGRNGNDGLHYDEVDGES*
Ga0114934_103956701	3300011013	Deep Subsurface	MSKGDKPRPLSISYKEYSDRYEAIFGKKDDIEEENHMNVIGQNSNDGLHYDKVDGES*
Ga0160423_101039864	3300012920	Surface Seawater	MSKGSKPRPLSVSYDEYSDRYDAIFGRKDDKDTDNKLNFTEEEEIEAEKRINIIGQNGNDGLHYDKIDGES*
Ga0160423_105588293	3300012920	Surface Seawater	MSKGDKPRPLSVSYKEYSDNYEAIFGKKDKEDKSLNELTEEEEIQAEKRMDIIGQNGNEGLHYDEVDG*
Ga0163110_100778674	3300012928	Surface Seawater	MSKGDKPRPLSISYQQYSDNYEAIFGKKDNTGESTLYEGLSEDEIAAAEKRIDIIGQNGNDGLHYDKVDGES*
Ga0163109_100682195	3300012936	Surface Seawater	MSKGDKPRPLSVSYKEYSDNYEAIFGRKDSKDTDNTLNLTEEEEIQAEKRMDIIGQNGNDGLHYDKVDGES*
Ga0163179_109163053	3300012953	Seawater	MSKGDKPRPLSVSYKKYIDNYEAIFGKKEDNDTDTTLNLTAEEELQAEKRINIIGQNGNDGLHYDEVDGES*
Ga0163111_101600783	3300012954	Surface Seawater	LYTIIYSMSKGDKPRPLSVSYKEYSDNYEAIFGRKDSKDTDNTLNLTEEEEIQAEKRMDIIGQNGNDGLHYDKVDGES*
Ga0163111_111083794	3300012954	Surface Seawater	KGDKPRPLSISYQQYSDNYEAIFGKKDNTGESTLYEGLSEDEIAAAEKRIDIIGQNGNDGLHYDKVDGES*
Ga0181369_10258071	3300017708	Marine	MGKGDKPRPLSISYEEYANRYDTIYGKKDSKDKESLLNLTEEEEIEAEKRINIIGQNGN
Ga0181383_10111585	3300017720	Seawater	DTPRPLSVSYKEYSDRYEAIFGKKDDIEELSMTEEEEKEAEIRMNVIGQNGNDGLHYDKLDEES
Ga0181417_10116011	3300017730	Seawater	TPRPLSVSYKEYSDRYEAIFGKKDDIEELSMTEEEEKEAEIRMNVIGQNGNDGLHYDKLDEES
Ga0181415_10148634	3300017732	Seawater	MSKGDTPRPLSVSYKEYSDRYEAIFGKKDDIEELSMTEEEEKEAEIRMNVIGQNGNDGLHYDKLDEES
Ga0181428_10434624	3300017738	Seawater	MSKGDKPRPLSVSYKKYIDNYEAIFGKKDKESLFNLTEEEEIEAEKRINIIGQNGNDGLHYDEVDGES
Ga0181407_11834632	3300017753	Seawater	MSKGDKPRPLSISYKKYTDNYEAIFGKKDDIKPDNTLNLTEEEEIEAEKRINIIGQNGNDGLHYDE
Ga0181420_11739842	3300017757	Seawater	MSKGDTPRPLSVSYKEYSDRYEAIFGKKDDIEELSMTEEEEKEAEIRMNVIGQNGNDGLHYDKL
Ga0181409_12307801	3300017758	Seawater	MSKGDKPRPLSVSYKQYSDNYEAIFGKKDNTYDHDHVLYNGLTEEEVAEAEKRIDIIGQNGNNGLHYEEVDGES
Ga0181410_10429233	3300017763	Seawater	YTIIYSMSKGDKPRPLSVSYKKYIDNYEAIFGKKDKESLLNLTEEEEIEAEKRINIIGQNGNDGLHYDEVDGES
Ga0181385_11527243	3300017764	Seawater	MSKGDKPRPLSVSYKKYIDNYEAIFGKKEDNDTDSTLNLTAEEELQAEKRINIIGQNGNDGLHYDEVDGES
Ga0181395_10257685	3300017779	Seawater	MSKGDKPRPLSISYKKYTDNYEAIFGKKDDIKPDNTLNLTEEEEIEAEKRINIIGQNGNDGLHYDEVD
Ga0211532_101620792	3300020403	Marine	MSKGDKPRPLSVSYKQYSDNYEAIFGKKDTTDCDSLGADIEQELEAEKRIDIIGRNGNDGLHYDEVDGES
Ga0211659_101545083	3300020404	Marine	MSKGSKPRPLSVSYDEYSDRYDAIFGRKGDKDTDNTLNLTEEEEIEAEKRINIIGQNGNDGLHYDKVDGES
Ga0211699_103491481	3300020410	Marine	MSKGDKPRPLSVSYKQYSDNYEAIFGNKDKQQTLYEDLTEEEIEEAEKRIDIIGQNGNDGLHYDEVDGKS
Ga0211587_102149773	3300020411	Marine	MSKGDKPRPLSVSYQQYSDNYEAIFGNKDKQQTLYEDLTEEEIEEAEKRIDIIGQNGNDGLHYDEVDGES
Ga0211574_101241984	3300020446	Marine	MSKGSKPRPLSVSYREYSDRYEAIFGRKGNKDTDNTLNLTEEEEIEAEKRINIIGQNGNDGLHYDKIDGES
Ga0211473_100351472	3300020451	Marine	MSKGDKPRPLSVSYKQYSDNYEAIFGKKNTTQEDLSLYDGLTEEEVDKAEKRIDIIGQNGNDGLHYDEVDGES
Ga0211473_100861644	3300020451	Marine	YPMSKGDKPRPLSISYQQYSDNYEAIFGKKDKQQILYEDFTEEEIEEAEKRIDIIGQNGNDGLHYDEVDGES
Ga0211614_100296824	3300020471	Marine	MSKGDKPRPLSISYKEYSDNWEAIFGKKEEQEIDGISMSAEEEIKAEKRMDIIGQNGNEGLHYEDIDG
Ga0224906_10315474	3300022074	Seawater	MSKGDKPRPLSVSYEEYSSNYEAIFGKKDEPSEDIAMSDEEEVEAEKRMNIIGRNGNDGTHYEVVDG
Ga0209992_100617574	3300024344	Deep Subsurface	MSKGDKPRPLSVSYDEYSRKWDDIFGKKDTAEENVLYDGLGTDIEQELEAEARINIIGKNGNDGLHYDEVDGES
Ga0244775_113757521	3300024346	Estuarine	IIYSMSKGDKPRPLSISYKKYTDNYEAIFGKKDDIKPDNTLNLTEEEEIEAEKRINIIGQNGNDGLHYDEVDGESXIYTTRGP
Ga0208157_10038189	3300025086	Marine	MSKGDKPRPLSVSYKKYIDNYEAIFGKKDKESLLNLTEEEEIEAEKRINIIGQNGNDGLHYDEVDGES
Ga0208157_10155864	3300025086	Marine	MSKGDKPRPLSISYQQYSDNYEAIFGRKDNKDTDNTLNLTKEEEAEAEKRIDIIGQNGNDGLHYEEVDGES
Ga0208669_10456751	3300025099	Marine	IIYTMSKGDKPRPLSISYQQYSDNYEAIFGRKDNKDTDNTLNLTKEEEAEAEKRIDIIGQNGNDGLHYEEVDGES
Ga0208159_10217614	3300025101	Marine	MSKGSKPRPLSVSYDEYSDRYDAIFGRKDDKDTDNTLNLTEEEEIEAEKRINIIGQNGNDGLHYDKVDGES
Ga0208159_10406501	3300025101	Marine	YLIIYSMGKGDKPRPLSISYEEYANRYDAIYGKKDNKDKESLLNLTEEEEIEAEKRINIIGQNGNDGLHYDEVDGES
Ga0208666_10388024	3300025102	Marine	MGKGDKPRPLSISYEEYANRYDTIYGKKDSKDKESLLNLTEEEEIEAEKRINIIGQNGNDGLHYDEVDGES
Ga0208158_10176771	3300025110	Marine	IYPMSKGDKPRPLSVSYQQYSDNYEAIFGNKDKQQILYEDFTEEEIEEAEKRIDIIGQNGNDGLHYDEVDGES
Ga0209535_10105435	3300025120	Marine	MSKGDTPRPLSVSYKEYSDRYEAIFGKKDDIEELSMTEEEEKEAEIRMNIIGQNGNDGLHYDKLDEES
Ga0209535_10302465	3300025120	Marine	MSKGDKPRPLSISYKKYTDNYEAIFGKKDDIKPDNTLNLTEEEEIEAEKRINIIGQNGNDGLHYDEVDGES
Ga0209535_11204313	3300025120	Marine	MSKGDKPRPLSISYKKYIDNYEAIFGKKDDIEPDSTLNLTKEEEIRAEKRINIIGQNGNDGLHYDKVDGES
Ga0209348_10028223	3300025127	Marine	MSKGDKPRPLSVSYKEYSDNYEAIFGRKDSKDTDNTLNLTEEEEIEAEKRINIIGQNGNDGLHYDKVDGES
Ga0209348_10595102	3300025127	Marine	MGKGDKPRPLSISYEEYANRYDAIYGKKDNKDKESLLDLTEEEEIKAEKRINIIGQNGNDGLHYDEVDGES
Ga0208919_10329642	3300025128	Marine	MSKGDKPRPLSVSYQQYSDNYEAIFGNKDKQQILYEDFTEEEIEEAEKRIDIIGQNGNDGLHYDEVDGES
Ga0209232_10376261	3300025132	Marine	VSYKEYSDNYEAIFGKKDKEDKSLNELTEEEEIQAEKRMDIIGQNGNEGLHYDEVDG
Ga0209232_11122442	3300025132	Marine	MSKGAKPRPLSVSYKQYSDNYDAIFGKKDETDENVLYDGLTEEEVTEAEKRIDIIGRNGNDGLHYDEVDGES
Ga0209232_12431003	3300025132	Marine	MSKGDTPRPLSVSYKEYSDRYEAIFGKKEIAEEPDVYDGLTEDEELEAEKRMDVIGQNGNDGLHYDKVDGES
Ga0209336_101490712	3300025137	Marine	MSKGDKPRPLSVSYKKYTDNYEAIFGKKDDIEPDNTLNLTAEEELQAEKRINIIGQNGNDGLHYDKIDEEP
Ga0209756_100178817	3300025141	Marine	MGKGDKPRPLSVSYKQYSDNYEAIFGKEDTTEEDTLCDSLGADIEQELEAEKRIDIIGRNGNDGLHYDEVDGES
Ga0209645_10004906	3300025151	Marine	MSKGDKPRPLSVSYKEYSDNYEAIFGKKDKEDKSLNELTEEEEIQAEKRMDIIGQNGNEGLHYDEVDG
Ga0208449_11377372	3300025280	Deep Ocean	MSKGDKPRPLSVSYEEYSKKWDDIFGKKDTTEDNILYDGLGSDLEQELEAEKRIDIIGKNGNDGLHYDNIDGESXIHVSSRP
Ga0208684_10374051	3300025305	Deep Ocean	MSKGDKPRPLSVSYEEYSKKWDDIFGKKDTTEDNILYDGLGSDLEQELEAEKRIDIIGKNGNDGLHYDNIDGES
Ga0256382_10055194	3300028022	Seawater	MSKGDKPRPLSISYKEYSDRYEAIFGKKDDIEEENHMNVIGQNSNDGLHYDKVDGES
Ga0256382_10557421	3300028022	Seawater	MSKGDKPRPLSVSYQQYSDNYEAIFGKKDTQQALYDGLTEEEVAAAEKRIDVIGQNGNDGLHYEEVDGES
Ga0183748_1000006170	3300029319	Marine	MSKGDKPRPLSISYKEYSDNWEAIFGKKEEQEIDGISMSAEEEIKAEKRMDIIGQNGNEGLHYDDIDG
Ga0183748_10346693	3300029319	Marine	MSKGDKPRPLSVSYKQYSDNYEAIFGKKEIAEQPTIYEGLSEEEIEEAEKRMDVIGQNGNDGLHYDKVDGES
Ga0183748_10430341	3300029319	Marine	SVSYKEYSDNYEAIFGKKDEEAKSLNELTEEEEIQAEKRMDIIGQNGNEGLHYDEVDG
Ga0183748_10645724	3300029319	Marine	MSKGDKPRPLSVSYKQYSDNYEAIFGKKDKTDEHVLYDGLTEEEEAAAEKRIDIIGQNGNDGLHYDEVDGES
Ga0183748_11059753	3300029319	Marine	MSKGDKPRPLSVSYQQYSDNYEAIFGNKDKHKRQDLYEGLSEEEIEEAEKRIDIIGQNGNDGLHYDEVDGES
Ga0183748_11361502	3300029319	Marine	MSKGDKPRPLSVSYDEYSRKWDDIFGKKDTTEDITLSENEEREAEARIDIIGKNGNDGLHYEQVDGES
Ga0183755_10913842	3300029448	Marine	MSKGDTPRPLSVSYKEYSDNYEAIFGKKDQEPKYLNELTEEEEIQAEKRMDIIGQNGNEGTHYDEVDG
Ga0183757_10019264	3300029787	Marine	MSKGDKPRPLSVSYKKYIDNYEAIFGKKEDNDTDSTLNLTAEEELQAEKRINIIGQNGNDGLHYDEIDGES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096205

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences