Metagenome / Metatranscriptome Family F096179

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096179
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	45 residues
Representative Sequence	LTPLLLALGASLAWGVADFFGPLVSRTLGSLRVLFWAQVGGVAAIA
Number of Associated Samples	97
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	32.69 %
% of genes near scaffold ends (potentially truncated)	99.05 %
% of genes from short scaffolds (< 2000 bps)	96.19 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.238 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (23.810 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.46% β-sheet: 0.00% Coil/Unstructured: 40.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01966	HD	87.62
PF06245	DUF1015	4.76
PF07514	TraI_2	1.90
PF02410	RsfS	0.95
PF08007	JmjC_2	0.95
PF13662	Toprim_4	0.95
PF05960	DUF885	0.95
PF10609	ParA	0.95
PF08299	Bac_DnaA_C	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG4198	Uncharacterized conserved protein, DUF1015 family	Function unknown [S]	4.76
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.95
COG0799	Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits	Translation, ribosomal structure and biogenesis [J]	0.95
COG2850	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain	Translation, ribosomal structure and biogenesis [J]	0.95
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.24 %
All Organisms	root	All Organisms	44.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.24 %
cellular organisms	root	All Organisms → cellular organisms	44.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.24 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.24 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.19 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.24 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	26.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.24 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	20.00 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.71 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	1.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.24 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	13.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.71 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.24 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	13.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.71 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.24 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	13.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.71 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig59644	Not Available	611	Open in IMG/M
3300001532\|A20PFW1_1321741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	746	Open in IMG/M
3300001535\|A3PFW1_10572801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	514	Open in IMG/M
3300001536\|A1565W1_10316709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	772	Open in IMG/M
3300001538\|A10PFW1_10135773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	625	Open in IMG/M
3300001538\|A10PFW1_10293484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1407	Open in IMG/M
3300002568\|C688J35102_120456068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1083	Open in IMG/M
3300004081\|Ga0063454_100740724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	748	Open in IMG/M
3300005181\|Ga0066678_10164715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1396	Open in IMG/M
3300005181\|Ga0066678_10287546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1073	Open in IMG/M
3300005329\|Ga0070683_100648845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1011	Open in IMG/M
3300005436\|Ga0070713_101441397	Not Available	668	Open in IMG/M
3300005454\|Ga0066687_10737423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	586	Open in IMG/M
3300005455\|Ga0070663_101513485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	597	Open in IMG/M
3300005539\|Ga0068853_101037830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300005713\|Ga0066905_102271759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	507	Open in IMG/M
3300005834\|Ga0068851_10864104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	565	Open in IMG/M
3300005949\|Ga0066791_10133607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	509	Open in IMG/M
3300006028\|Ga0070717_11502795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	611	Open in IMG/M
3300006031\|Ga0066651_10345868	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300009038\|Ga0099829_11131995	Not Available	649	Open in IMG/M
3300009098\|Ga0105245_11398524	Not Available	750	Open in IMG/M
3300009137\|Ga0066709_102809887	Not Available	646	Open in IMG/M
3300009137\|Ga0066709_103698881	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	555	Open in IMG/M
3300009176\|Ga0105242_12126253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	605	Open in IMG/M
3300009792\|Ga0126374_11233220	Not Available	601	Open in IMG/M
3300010036\|Ga0126305_10601033	Not Available	739	Open in IMG/M
3300010039\|Ga0126309_10248974	Not Available	1006	Open in IMG/M
3300010361\|Ga0126378_10543177	Not Available	1277	Open in IMG/M
3300010375\|Ga0105239_13644795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300010376\|Ga0126381_102279496	Not Available	778	Open in IMG/M
3300010885\|Ga0133913_11916176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1477	Open in IMG/M
3300012011\|Ga0120152_1119547	Not Available	726	Open in IMG/M
3300012206\|Ga0137380_10944828	Not Available	739	Open in IMG/M
3300012207\|Ga0137381_10393210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1209	Open in IMG/M
3300012948\|Ga0126375_11353894	Not Available	601	Open in IMG/M
3300012958\|Ga0164299_10765787	Not Available	684	Open in IMG/M
3300012985\|Ga0164308_10542726	Not Available	980	Open in IMG/M
3300012985\|Ga0164308_10791514	Not Available	826	Open in IMG/M
3300012985\|Ga0164308_11386671	Not Available	641	Open in IMG/M
3300013104\|Ga0157370_11066823	Not Available	730	Open in IMG/M
3300013307\|Ga0157372_13041364	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300015203\|Ga0167650_1061529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	921	Open in IMG/M
3300017959\|Ga0187779_10900843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300017966\|Ga0187776_10953540	Not Available	627	Open in IMG/M
3300017994\|Ga0187822_10225953	Not Available	634	Open in IMG/M
3300018060\|Ga0187765_10856393	Not Available	611	Open in IMG/M
3300020081\|Ga0206354_11577805	Not Available	551	Open in IMG/M
3300020082\|Ga0206353_10552454	Not Available	629	Open in IMG/M
3300021363\|Ga0193699_10175520	Not Available	886	Open in IMG/M
3300024232\|Ga0247664_1050160	Not Available	966	Open in IMG/M
3300024331\|Ga0247668_1075171	Not Available	683	Open in IMG/M
3300025505\|Ga0207929_1114601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300025898\|Ga0207692_10339418	Not Available	924	Open in IMG/M
3300025915\|Ga0207693_10172319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1704	Open in IMG/M
3300025917\|Ga0207660_10783307	Not Available	778	Open in IMG/M
3300025920\|Ga0207649_11033418	Not Available	647	Open in IMG/M
3300025921\|Ga0207652_10743449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	873	Open in IMG/M
3300025929\|Ga0207664_10639543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	956	Open in IMG/M
3300025932\|Ga0207690_10354788	Not Available	1160	Open in IMG/M
3300025939\|Ga0207665_11116139	Not Available	629	Open in IMG/M
3300025944\|Ga0207661_10516519	Not Available	1092	Open in IMG/M
3300025944\|Ga0207661_10705100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	928	Open in IMG/M
3300025949\|Ga0207667_10615969	Not Available	1093	Open in IMG/M
3300026041\|Ga0207639_11943588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300026075\|Ga0207708_11175006	Not Available	670	Open in IMG/M
3300026089\|Ga0207648_12208862	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300026142\|Ga0207698_11179732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	779	Open in IMG/M
3300026538\|Ga0209056_10593903	Not Available	559	Open in IMG/M
3300027773\|Ga0209810_1057880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1970	Open in IMG/M
3300028800\|Ga0265338_11017559	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300028828\|Ga0307312_10226735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1205	Open in IMG/M
3300028875\|Ga0307289_10253944	Not Available	723	Open in IMG/M
3300030336\|Ga0247826_10372167	Not Available	1047	Open in IMG/M
3300031235\|Ga0265330_10165973	Not Available	937	Open in IMG/M
3300031546\|Ga0318538_10805626	Not Available	510	Open in IMG/M
3300031564\|Ga0318573_10031053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2500	Open in IMG/M
3300031640\|Ga0318555_10211392	Not Available	1046	Open in IMG/M
3300031711\|Ga0265314_10486497	Not Available	652	Open in IMG/M
3300031723\|Ga0318493_10699355	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300031765\|Ga0318554_10324658	Not Available	875	Open in IMG/M
3300031781\|Ga0318547_10114592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1556	Open in IMG/M
3300031782\|Ga0318552_10510146	Not Available	614	Open in IMG/M
3300031782\|Ga0318552_10612292	Not Available	556	Open in IMG/M
3300031805\|Ga0318497_10028412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2776	Open in IMG/M
3300031890\|Ga0306925_12239055	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031894\|Ga0318522_10273880	Not Available	640	Open in IMG/M
3300031896\|Ga0318551_10875327	Not Available	524	Open in IMG/M
3300031912\|Ga0306921_10963518	Not Available	965	Open in IMG/M
3300031938\|Ga0308175_100745320	Not Available	1067	Open in IMG/M
3300031939\|Ga0308174_11572464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	564	Open in IMG/M
3300031996\|Ga0308176_11277142	Not Available	780	Open in IMG/M
3300031996\|Ga0308176_12527986	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300032008\|Ga0318562_10108149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1583	Open in IMG/M
3300032067\|Ga0318524_10704129	Not Available	533	Open in IMG/M
3300032074\|Ga0308173_12218965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300032180\|Ga0307471_104336759	Not Available	501	Open in IMG/M
3300032782\|Ga0335082_10585738	Not Available	977	Open in IMG/M
3300032892\|Ga0335081_12126926	Not Available	594	Open in IMG/M
3300032897\|Ga0335071_10038409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4741	Open in IMG/M
3300033004\|Ga0335084_10719984	Not Available	1016	Open in IMG/M
3300033758\|Ga0314868_018626	Not Available	737	Open in IMG/M
3300033803\|Ga0314862_0067023	Not Available	797	Open in IMG/M
3300033805\|Ga0314864_0075869	Not Available	797	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.81%
Host-Associated	Host-Associated	16.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.90%
Plants	Host-Associated → Plants	16.19%
Aquatic	Environmental → Aquatic	1.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.71%
Freshwater	Environmental → Aquatic → Freshwater	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.19%
Loam	Environmental → Terrestrial → Soil → Loam	15.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.76%
Lake	Environmental → Aquatic → Freshwater → Lake	0.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.95%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.67%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.86%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.86%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.95%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.95%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.95%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.95%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
3300001532	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-PF 12A)- 1 week illumina	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005949	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033758	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_A	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_00805220	2124908043	Soil	LTALVLALGASLAWGVADFVGPLVARTLGALRVLFW
A20PFW1_13217411	3300001532	Permafrost	LGSLFLALGASLAWGFADFFGPLVSRTLGSLRVLFWAQVGGLLAI
A3PFW1_105728012	3300001535	Permafrost	LTPLLLALAASLAWGFADFFGPLVSRTLGSLRVLFWAQVGGLLA
A1565W1_103167093	3300001536	Permafrost	LSSLFLALGASLAWGFADFFGPLVSRTLGSLRVLFWAQVGGLLAIALAV
A10PFW1_101357732	3300001538	Permafrost	LSSLFLALGASLAWGFADFFGPLVSRTLGSLRVLFWAQVGGLLAIALAVAIRGQG
A10PFW1_102934843	3300001538	Permafrost	LNALALALGASLAWGVADFVGPLVGRALGTLRVLF
C688J35102_1204560683	3300002568	Soil	LTPLLLALGASIAWGVADFVGPLLGRTLGILRIMFWGQVGGL
Ga0063454_1007407242	3300004081	Soil	LTPLLLALGASLAWGVADFFGPLVSRTLGSLRVLFWAQVGGVAAIA
Ga0066678_101647153	3300005181	Soil	LNPLLLALGASLVWGVADFTGPLVSRALGTLRVLFWAQVGGVA
Ga0066678_102875461	3300005181	Soil	LTAALLLALGASLAWGVADFVGPWRGRTLGALRVMLWAQI
Ga0070683_1006488451	3300005329	Corn Rhizosphere	LTPLVLALGASLAWGVGDFFGPLISRTVGVLPVLMWAQIGGV
Ga0070713_1014413972	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTAALLLALGASLAWGVADFVGPWQGRALGTLRVMLWAQLGGIAL
Ga0066687_107374231	3300005454	Soil	LTAALLLALGASLAWGVADFVGPWQGRTLGALRVMLWAQIGGIALLGIVMA
Ga0070663_1015134851	3300005455	Corn Rhizosphere	LTPLLLALGASLAWGVGDFFGPLISRTLGVLPVLLWAQVGGVASIAVAM
Ga0068853_1010378301	3300005539	Corn Rhizosphere	LTPLFLALGASLAWGVGDFFGPLISRTVGVLPVLMWAQIGGVASLAVAVAIRAQGPAGWGVLYAIGASFG
Ga0066905_1022717591	3300005713	Tropical Forest Soil	VLLALGASLAWGVGDFVGPWQGKTFGVLRVMLWAQLGGL
Ga0068851_108641042	3300005834	Corn Rhizosphere	LTPLLLALGASLAWGVGDFFGPLISRTAGVLPVLMWAQVGGVASLAVAMAIRAEGP
Ga0066791_101336072	3300005949	Soil	MTGVLLALGASLAWGVADFVGPWKARTLGALRVMLWAQFGGLTAITIVVAIHAKP
Ga0070717_115027952	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LTPLLLALAASLAWGIGDFVGPLLSRAEGVLPVLFWAQIGGC
Ga0066651_103458681	3300006031	Soil	VTALLALGASFAWGVADFVGPLKARTLGTLRVLLWAQVGGLVAIAAAVAAR
Ga0099829_111319952	3300009038	Vadose Zone Soil	LTAVLLALGASLSWGLADFVGPLKGRTLGALRVLFVAQACGVL
Ga0105245_113985241	3300009098	Miscanthus Rhizosphere	LTPLLLALGASLAWGVADFVGPLLSRTLGLLRIMFWGQVGGLAGIAI
Ga0066709_1028098871	3300009137	Grasslands Soil	LTPLLLPLGASLAWVVADFVGPLFSRTGGTLPILLWGQIGG
Ga0066709_1036988813	3300009137	Grasslands Soil	VTPALLALGASVAWGFADFVGPLWARTWGTLRVLLWAQVGGLAAIGAAVAI
Ga0105242_121262531	3300009176	Miscanthus Rhizosphere	VTALLLALGASLAWGVADFVGPWQGRTLGALRVMFWAQVAGVTAVALVVLAR
Ga0126374_112332202	3300009792	Tropical Forest Soil	LTEALLLALGASLAWGVGDFVGPWQGKTFGVLRVMLWAQLGGLVLVAILVAVRGRPPD
Ga0126305_106010331	3300010036	Serpentine Soil	LTAVLLALGASLAWGGADFVGPLKGRTLGTLRVLLWAQVAGLAAIAAVV
Ga0126309_102489741	3300010039	Serpentine Soil	LTAVLLALGASLAWGVADFAGPLKGRTLGTLRVLLWAQVG
Ga0126378_105431773	3300010361	Tropical Forest Soil	MLALGASLAWGVADFVGPLWGRTWGALRVLLWAQIGGLAAIAI
Ga0105239_136447951	3300010375	Corn Rhizosphere	LTPLLLALGASLAWGVGDFFGPLISRTVGVLPVLMWAQ
Ga0126381_1022794961	3300010376	Tropical Forest Soil	LTAFTLALGASLAWGVADFVGPLWGRTWGVLRVLLWAQIGGLAAIAI
Ga0133913_119161763	3300010885	Freshwater Lake	VTGLLLALGASLSWGVADFVGPWQGRTLGVLRVMVWAQAAGVIGIALVVAFVWKAPPGY
Ga0120152_11195472	3300012011	Permafrost	LTPLLFALGASLAWGVGDFFGPLVSRTLGVLPVLMWAHIGG
Ga0137380_109448282	3300012206	Vadose Zone Soil	LTPLLLALGASLVWGVADFTGPLLSRALGTLRVLFWAQVGGVAALVPVLAVRAEA
Ga0137381_103932101	3300012207	Vadose Zone Soil	LTAALLLALGASLAWGVADFVGPWRGRTLGALRVMLWAQIGGIAL
Ga0126375_113538941	3300012948	Tropical Forest Soil	VNSLLLALGASLAWGVADFVGPWQGRILGALRVMLWAQVA
Ga0164299_107657871	3300012958	Soil	LSPLLLALGASLAWGVADFVGPLISRTLGTLRVLFW
Ga0164308_105427261	3300012985	Soil	LTPLLLALGASLAWGVADFVGPLLSRTLGLLRIMFWGQVGGFAGIAIVVAIR
Ga0164308_107915141	3300012985	Soil	LTPLLLALGASLAWGVADFAGPLISRTLGTLRVLFW
Ga0164308_113866711	3300012985	Soil	LTALALALGASIAWGVSDFVGPLVARALGSLRVLFWA
Ga0157370_110668231	3300013104	Corn Rhizosphere	LTPLVLALGASLAWGVGDFFGPLISRTVGVLPVLMWAQIGGGASLAVAAAIRGQGPAGWG
Ga0157372_130413642	3300013307	Corn Rhizosphere	LTPLLLALGASLAWGVGDFFGPLISRTLGVLPVLLWA
Ga0167650_10615291	3300015203	Glacier Forefield Soil	LTSLLLALGASLAWGVADFVGPLVSRTLGALRIMFWGQVGGLAAIAAIV
Ga0187779_109008431	3300017959	Tropical Peatland	VTGVLLALGASLAWGVADFAGPFQARTLGTFRVLLWAQ
Ga0187776_109535402	3300017966	Tropical Peatland	VTAVLLALGASLAWGVADFVGPWQARTLGALRVMLWAQVVGVTA
Ga0187822_102259531	3300017994	Freshwater Sediment	LTAALLFALGASLAWGVADFVGPWQGRTLGALRVLLW
Ga0187765_108563931	3300018060	Tropical Peatland	VSGLLLALGASLAWGVADFVGPWQGRTLGVLRVLVWAELAGAVAVG
Ga0206354_115778051	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	LTPLVLALGASLAWGVGDFFGPLISRTVGVLPVLMWAQIGGVASLAVAVAIRGQGPAGW
Ga0206353_105524541	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	LTPLLLALGASLAWGVADFVGPLLGRTLGVLRIMFW
Ga0193699_101755202	3300021363	Soil	LTPLLLALGASLAWGVADFVGPLLSRTLGVLRIMFWAQVGGLTGIAI
Ga0247664_10501601	3300024232	Soil	LTPLLLALGASIAWGVADFVGPLISRTWGTLRVMFWAQIG
Ga0247668_10751711	3300024331	Soil	LSSLFLALGASLAWGFADFFGPLVSRTLGLLPVIFWAQVGGVLAIALAVAI
Ga0207929_11146012	3300025505	Arctic Peat Soil	LSSLFLALGASLAWGFADFFGPLVSRTLGSLRVLFWAQ
Ga0207692_103394182	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LSPLLLALGASLAWGVGDFVGPLLSRMLGVLRVLFWVEVGGLAAIAVAV
Ga0207707_106186402	3300025912	Corn Rhizosphere	LSSLFLALGASLAWGFADFFGPLVSRTLGLLPVIFWAQVGGVIAIALAVAIRGQGPAGWAVLFAILASLG
Ga0207693_101723193	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LTPLLLALGASIAWGVADFVGPLISRTWGTLRVMFWAQIGGFAGI
Ga0207660_107833071	3300025917	Corn Rhizosphere	LSSLFLALGASLAWGFADFFGPLVSRTLGLLPVIFWAQVGGV
Ga0207649_110334182	3300025920	Corn Rhizosphere	LTPLVLALGASLAWGVGDFFGPLISRTVGVLPVLMWAQIG
Ga0207652_107434492	3300025921	Corn Rhizosphere	LTPLLLALGASLAWGVADFVGPLFSRTLGSIRVLFWAQVGGVAAIA
Ga0207664_106395431	3300025929	Agricultural Soil	LTPLLLALGASLAWGVSDFFGPLVSRTLGSLRVLFWAQVGGCASIALAVAIHGRGPAG
Ga0207690_103547881	3300025932	Corn Rhizosphere	LTPLFLALGASLAWGVGDFFGPLISRTVGVLPVLMWAQIGGVASLAVAV
Ga0207665_111161392	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LTPLLLALGASLAWGISDFVGPLFSRTLGILRVLFWGQLGG
Ga0207661_105165191	3300025944	Corn Rhizosphere	LTPLVLALGASLAWGVGDFFGPLISRTVGVLPVLMWAQIGGVASLAVAVAIRGQGP
Ga0207661_107051002	3300025944	Corn Rhizosphere	LTPLLLALGASLAWGVGDFFGPLISRTLGVLPVLLWAQVGGVASIAVAMA
Ga0207667_106159691	3300025949	Corn Rhizosphere	LSSLFLALGASLAWGFADFFGPLVSRTLGLLPVIFWAQVGGVIAIALAVAIR
Ga0207639_119435881	3300026041	Corn Rhizosphere	LTPLLLALGASLAWGVSDFVGPLVARAAGTLRVLFWAQIG
Ga0207708_111750062	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VTAVLLALGASLAWGVADFVGPWQARTWGTLRVLLW
Ga0207648_122088622	3300026089	Miscanthus Rhizosphere	LTPLLLALGASLAWGVADFAGPLISRTLGTLRVLF
Ga0207698_111797322	3300026142	Corn Rhizosphere	MPALVSRRPTPLLLALSASLAWGVADFVGPVWARTLGTLRVLLWAQVGGV
Ga0209056_105939032	3300026538	Soil	VSLLLALGASLAWGVADFAGPLKGRTLGALPVLLWA
Ga0209810_10578803	3300027773	Surface Soil	VSDTGALFLALGASLAWGVADFVGPLWGRTFGALRV
Ga0265338_110175592	3300028800	Rhizosphere	VNEVLLALGASLAWGVADFVGPWQGHALGALRVMLWSQVAGL
Ga0307312_102267353	3300028828	Soil	VPAALLLALSASLAWGVTDFVGPWQGRAFGALRVMLWGQFGGVIAIAI
Ga0307289_102539441	3300028875	Soil	LTPLLLALGASLAWGVADFVGPLLSRTLGLLRIMFWGQVGGLA
Ga0247826_103721671	3300030336	Soil	VTAVLLALGASLVWGVADFVGPLQARTHGTLRVLMWVQVGGLT
Ga0265330_101659731	3300031235	Rhizosphere	LTPLLLALGASLAWGVADFVGPLVSRTLGMLPVLFWAQIGVVLALA
Ga0318538_108056262	3300031546	Soil	LSALALALGASLAWGVADFVGPLWGRTWGALRVLLWA
Ga0318573_100310531	3300031564	Soil	LSALLLALGASLAWGVADFVGPLWGRTWGALRVLL
Ga0318555_102113921	3300031640	Soil	VNGLLLALGASLAWGVADFVGPLWGRTWGALRVLLWAQLAGVAAIAIAVAIR
Ga0265314_104864972	3300031711	Rhizosphere	LSPLILALSASLTWGVADFVGPLRARTLGTLPVLLWAQVGGLVAI
Ga0318493_106993551	3300031723	Soil	VNALLLALGASLAWGVADFVGPWQGRTLGALRVMLWGQIAGFTTLI
Ga0318554_103246581	3300031765	Soil	LSALALALGASLAWGVADFVGPLWGRTWGALRVLLWAQLAGVAAIAVAVA
Ga0318547_101145923	3300031781	Soil	LSALLLALGASLAWGVADFVGPLWGRTWGALRVLLWAELGGLAGIALAV
Ga0318552_105101461	3300031782	Soil	LTPLLLALGASIAWGIADFAGPLISRTFGALRILFWAQVG
Ga0318552_106122921	3300031782	Soil	VNGLALALGASLAWGVADFVGPWQGRTLGTLRVLRWA
Ga0318497_100284121	3300031805	Soil	LSALALALGASLAWGVADFVGPLWGRTWGALRVLLWAQLAGVAAIA
Ga0306925_122390551	3300031890	Soil	LTALALALGASLAWGVADFVGPLWGRTWGALRVMFWAQVGGLAGIALAAVARGE
Ga0318522_102738801	3300031894	Soil	LTALALALGASLAWGVADFVGPLWGRTWGALRVMFWAQVGGLAG
Ga0318551_108753272	3300031896	Soil	VNGLLLALGASLAWGVADFVGPWQGRTLGALRVMFWAQVAGVSA
Ga0306921_109635182	3300031912	Soil	VNALLLALGASLAWGVADFVGPWQGRTLGALRVMLWGQ
Ga0308175_1007453201	3300031938	Soil	LTPLLLALGASLAWGVGDFFGPLISRSVGVLPVLLWAQVGGVASLAV
Ga0308174_115724641	3300031939	Soil	LTPLLLALGASLAWGVGDFFGPLISRSVGVLPVLLWAQVGGVASLAVAVAI
Ga0308176_112771422	3300031996	Soil	LTPLFLALGASLAWGVGDFFGPLISRTVGVLPVLM
Ga0308176_125279862	3300031996	Soil	LTPLLLALGASFAWGVGDFFGPLISRTLGVLPVLLWAQVGGVA
Ga0318562_101081493	3300032008	Soil	VTGLLLALGASLAWGVADFAGPFQARTLGTFRVLLWAQ
Ga0318524_107041291	3300032067	Soil	LTPLLLALGASIAWGIADFAGPLISRTFGALRILFWAQV
Ga0308173_122189652	3300032074	Soil	VSSALLALGASVAWGFADVVGPLWARTRGTLRVLLWAQVGGV
Ga0307471_1043367592	3300032180	Hardwood Forest Soil	LNPLLLALGASLAWGVADFTGPLVSRTFGALRILFWAQVGGVIGIAIAVGARAEGPA
Ga0335082_105857381	3300032782	Soil	LTPLLLALGASLAWGVADFVGPLVSRTLGSLPVLFWA
Ga0335081_121269262	3300032892	Soil	VTSLLLALGASLAWGVADFVGPWQARALGSLRVMLWAQLAGAVAMCVV
Ga0335071_100384091	3300032897	Soil	LSAFALALGASLAWGVADFVGPLWGRTWGALRVLLWAQVGGVVAIAIAVALRGQ
Ga0335084_107199841	3300033004	Soil	LTALALALGASLAWGVADFVGPLWGRTWGALRVMLWAQLAGVAAIAVAVAIR
Ga0314868_018626_1_117	3300033758	Peatland	MSALALALGASLAWGVADFVGPLWGRTWGALRVMLWAQL
Ga0314862_0067023_1_153	3300033803	Peatland	LSALALALGASLAWGVADFVGPLWGRTWGALRVLLWAQLAGVAAIAVAVAI
Ga0314864_0075869_2_142	3300033805	Peatland	MSALALALGASLAWGVADFVGPLWGRTWGALRVLLWAQLAGVAAIAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096179

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences