Metagenome Family F096176

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096176
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	72 residues
Representative Sequence	DWDAVRFSVARASREQITISFVCELGHAPIEHGKLTFDLASEAWLNAHPDPRVLRLATCYLQTYRARQSAVVV
Number of Associated Samples	91
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.90 %
% of genes near scaffold ends (potentially truncated)	91.43 %
% of genes from short scaffolds (< 2000 bps)	88.57 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (12.381 % of family members)
Environment Ontology (ENVO)	Unclassified (29.524 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.476 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.80% β-sheet: 31.68% Coil/Unstructured: 48.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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SCOP family	SCOP domain	Representative PDB	TM-score
d.233.1.1: Inhibitor of vertebrate lysozyme, Ivy	d4ps6a1	4ps6	0.64666
d.19.1.1: MHC antigen-recognition domain	d1a6za2	1a6z	0.63727
d.87.2.0: automated matches	d3nvvb2	3nvv	0.61588
d.25.1.1: Mitochondrial glycoprotein MAM33-like	d1yqfa1	1yqf	0.61567
c.74.1.1: AraD-like aldolase/epimerase	d2v2ba_	2v2b	0.61531

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF03061	4HBT	78.10
PF01654	Cyt_bd_oxida_I	8.57
PF02322	Cyt_bd_oxida_II	5.71
PF10609	ParA	1.90
PF08241	Methyltransf_11	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	8.57
COG1294	Cytochrome bd-type quinol oxidase, subunit 2	Energy production and conversion [C]	5.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	54.29 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	30.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	20.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	30.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	30.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	20.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.00 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.00 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	15.24 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.00 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	15.24 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10027555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4579	Open in IMG/M
3300001593\|JGI12635J15846_10324945	Not Available	953	Open in IMG/M
3300002245\|JGIcombinedJ26739_100526974	All Organisms → cellular organisms → Bacteria → Acidobacteria	1059	Open in IMG/M
3300002907\|JGI25613J43889_10171845	Not Available	572	Open in IMG/M
3300004092\|Ga0062389_100155486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2164	Open in IMG/M
3300004152\|Ga0062386_101840615	Not Available	505	Open in IMG/M
3300005468\|Ga0070707_100349637	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1436	Open in IMG/M
3300005536\|Ga0070697_101549140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	592	Open in IMG/M
3300005591\|Ga0070761_10448520	Not Available	791	Open in IMG/M
3300005602\|Ga0070762_10080555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1851	Open in IMG/M
3300006050\|Ga0075028_101004123	Not Available	519	Open in IMG/M
3300006052\|Ga0075029_100000509	All Organisms → cellular organisms → Bacteria	22280	Open in IMG/M
3300006052\|Ga0075029_100154231	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300006059\|Ga0075017_101224611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300006162\|Ga0075030_100374143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1136	Open in IMG/M
3300009029\|Ga0066793_10594470	Not Available	630	Open in IMG/M
3300009038\|Ga0099829_10179763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1702	Open in IMG/M
3300009089\|Ga0099828_10451035	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1160	Open in IMG/M
3300009525\|Ga0116220_10303761	Not Available	703	Open in IMG/M
3300009640\|Ga0116126_1152291	Not Available	775	Open in IMG/M
3300009645\|Ga0116106_1195845	Not Available	643	Open in IMG/M
3300009645\|Ga0116106_1242582	Not Available	573	Open in IMG/M
3300009762\|Ga0116130_1157756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300010343\|Ga0074044_10481501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300010343\|Ga0074044_11137659	Not Available	510	Open in IMG/M
3300010379\|Ga0136449_103461576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300011270\|Ga0137391_10427467	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1129	Open in IMG/M
3300011270\|Ga0137391_11189902	Not Available	610	Open in IMG/M
3300011271\|Ga0137393_11261673	Not Available	627	Open in IMG/M
3300012189\|Ga0137388_10174388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1922	Open in IMG/M
3300012354\|Ga0137366_10229899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1379	Open in IMG/M
3300012582\|Ga0137358_10854704	Not Available	600	Open in IMG/M
3300012917\|Ga0137395_11088375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300012924\|Ga0137413_11777060	Not Available	508	Open in IMG/M
3300014152\|Ga0181533_1310039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300014158\|Ga0181521_10186315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1151	Open in IMG/M
3300014158\|Ga0181521_10384003	Not Available	696	Open in IMG/M
3300014159\|Ga0181530_10157281	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1289	Open in IMG/M
3300014200\|Ga0181526_10283128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1056	Open in IMG/M
3300014502\|Ga0182021_13423777	Not Available	528	Open in IMG/M
3300014502\|Ga0182021_13501627	Not Available	522	Open in IMG/M
3300014657\|Ga0181522_10057719	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2193	Open in IMG/M
3300017823\|Ga0187818_10023849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2617	Open in IMG/M
3300017938\|Ga0187854_10027299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3075	Open in IMG/M
3300017995\|Ga0187816_10285739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300018008\|Ga0187888_1258599	Not Available	677	Open in IMG/M
3300018012\|Ga0187810_10131460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	998	Open in IMG/M
3300018017\|Ga0187872_10223588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300018017\|Ga0187872_10237414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300018021\|Ga0187882_1150299	Not Available	947	Open in IMG/M
3300018026\|Ga0187857_10139453	Not Available	1158	Open in IMG/M
3300018030\|Ga0187869_10119897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1319	Open in IMG/M
3300018030\|Ga0187869_10427830	Not Available	630	Open in IMG/M
3300018047\|Ga0187859_10481404	Not Available	689	Open in IMG/M
3300018085\|Ga0187772_10204904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1326	Open in IMG/M
3300018090\|Ga0187770_10651790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300020199\|Ga0179592_10127723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1167	Open in IMG/M
3300021170\|Ga0210400_10326162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1262	Open in IMG/M
3300021402\|Ga0210385_10486836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300021402\|Ga0210385_10538431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300021420\|Ga0210394_11713851	Not Available	526	Open in IMG/M
3300021432\|Ga0210384_10960248	Not Available	756	Open in IMG/M
3300022881\|Ga0224545_1061746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300025475\|Ga0208478_1083575	Not Available	571	Open in IMG/M
3300025507\|Ga0208188_1084246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300025576\|Ga0208820_1001981	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10588	Open in IMG/M
3300025922\|Ga0207646_10483423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1116	Open in IMG/M
3300026294\|Ga0209839_10290149	Not Available	504	Open in IMG/M
3300026356\|Ga0257150_1060081	Not Available	569	Open in IMG/M
3300026446\|Ga0257178_1043702	Not Available	577	Open in IMG/M
3300026489\|Ga0257160_1005364	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1629	Open in IMG/M
3300026496\|Ga0257157_1023436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1009	Open in IMG/M
3300027158\|Ga0208725_1062292	Not Available	550	Open in IMG/M
3300027394\|Ga0209904_1000793	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2794	Open in IMG/M
3300027439\|Ga0209332_1047517	Not Available	792	Open in IMG/M
3300027516\|Ga0207761_1092113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300027562\|Ga0209735_1036235	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1041	Open in IMG/M
3300027570\|Ga0208043_1014575	All Organisms → cellular organisms → Bacteria → Acidobacteria	2572	Open in IMG/M
3300027603\|Ga0209331_1149132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300027610\|Ga0209528_1015563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1659	Open in IMG/M
3300027676\|Ga0209333_1117249	Not Available	722	Open in IMG/M
3300027678\|Ga0209011_1143008	Not Available	675	Open in IMG/M
3300027701\|Ga0209447_10157847	Not Available	623	Open in IMG/M
3300027745\|Ga0209908_10162185	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300027846\|Ga0209180_10338649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300027846\|Ga0209180_10710092	Not Available	546	Open in IMG/M
3300027853\|Ga0209274_10569030	Not Available	587	Open in IMG/M
3300027889\|Ga0209380_10222695	All Organisms → cellular organisms → Bacteria → Acidobacteria	1108	Open in IMG/M
3300028747\|Ga0302219_10225111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300028747\|Ga0302219_10374930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300028776\|Ga0302303_10228264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300028798\|Ga0302222_10177744	Not Available	836	Open in IMG/M
3300028808\|Ga0302228_10235155	Not Available	829	Open in IMG/M
3300030503\|Ga0311370_11411134	Not Available	735	Open in IMG/M
3300030524\|Ga0311357_10520378	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300030524\|Ga0311357_10529591	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1093	Open in IMG/M
3300030617\|Ga0311356_10653348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1012	Open in IMG/M
3300030707\|Ga0310038_10210143	Not Available	923	Open in IMG/M
3300030906\|Ga0302314_11433390	Not Available	629	Open in IMG/M
3300031057\|Ga0170834_105193658	Not Available	556	Open in IMG/M
3300031232\|Ga0302323_100932554	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	961	Open in IMG/M
3300031247\|Ga0265340_10107469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1292	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Aquatic	Environmental → Aquatic	32.38%
Plants	Host-Associated → Plants	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.24%
Freshwater	Environmental → Aquatic → Freshwater	27.62%
Peat	Environmental → Terrestrial → Peat	11.43%
Sediment	Environmental → Aquatic → Sediment	4.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	27.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.62%
Loam	Environmental → Terrestrial → Soil → Loam	18.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.48%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.90%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.90%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	1.90%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.90%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.95%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.95%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.95%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027394	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712P3D	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_100275555	3300001593	Forest Soil	MRFSVAQISPGQVAICFVCELGHAPVEQGRLVFDLTNEVWLNVHPDPRVLRLATSFLQSYRTRQKAAAA*
JGI12635J15846_103249453	3300001593	Forest Soil	DWDAVRFSVARASREQITISFVCELGHAPIEHGKLTFDLASEAWLNAHPDPRVLRLATCYLQTYRARQSAVVV*
JGIcombinedJ26739_1005269741	3300002245	Forest Soil	PHLPQRRDWDAIRFSVARASAEQITICFVCELGHAPIEHGKLTFDLASEAWLNAHPDPRVLRLATCYLQTYRARQSAVVV*
JGI25613J43889_101718451	3300002907	Grasslands Soil	HTTRKQVAIRFVCELDHAPIEHGXLIFDLAKETWLDAHADPRVLRLATCYLQTYRARQSAVIV*
Ga0062389_1001554863	3300004092	Bog Forest Soil	SEQVAICFVCELAHAPIEHGKLTFDLASETWLNPYSDPRVQMLANSYLEAYRARQSGFVIG*
Ga0062386_1018406151	3300004152	Bog Forest Soil	ARVSPEQVTICFVCESAHAPIEHGKLTFDIASQAWLNVHPDPRVSSLAASYLQTYRARQSAALI*
Ga0070707_1003496373	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LGYATACPHLPPRRDWDAIRFSVANANANQVTLWYVCEKDHAPVEHGRLIFDLASEAWLNVHPDPRVLRLATCYLQAYRARQSAVLV*
Ga0070697_1015491401	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	CPHLPPRRDWDAIRFSIARASREQIAICFVCELGHAPIEQGKLTFDLASEAWLNAHPDPRVHRLATCYLQTYRDRQSAVIV*
Ga0070761_104485201	3300005591	Soil	IRFSVARVSGGQVTICFVCELGHAPIEHGKLTFDLTGDNWVNTHPDPRVLTLASSYLQAYRARQSAVII*
Ga0070762_100805551	3300005602	Soil	CFVCELAHAPIEHGELTFDLMSEVWLNAFPDPRVLTLANCYLQAYRARQSVSSHLTLYE*
Ga0075028_1010041232	3300006050	Watersheds	VGREQVTVCFVCELNHAPIEHGKLIFDLANDAWLVPPADERVLRLATCFLQTYRAQQSPVLV*
Ga0075029_1000005093	3300006052	Watersheds	VRFSVARASREQVAICYICELGHAPIEHGELTFDLTREAWVEAHPDPRVRTLAACYLQTYRARWDAVPA*
Ga0075029_1001542313	3300006052	Watersheds	RDWDAVRFSVARASRDQFTICYVCESGHAPIEHGELIFDLASEVWLQPHPDLRVLTLATCFLHAYRARQSALLI*
Ga0075017_1012246111	3300006059	Watersheds	LGYATACPHLPAGRDWDAIRFSVAQAGRDQITICFVCELDHAPIEHGKSTFDLVNDNWLDAPADARVRTLAASYLHTYRARQNTAVA*
Ga0075030_1003741433	3300006162	Watersheds	RDWDAVRFSVARVCREQVTICFVCELGHAPMEHGELTFDLVNQMWSNANPDPRVLTLATCYLQAYRARQDAVLI*
Ga0066793_105944701	3300009029	Prmafrost Soil	RFSVARVSREQVTICFVCELAHAPIEHGKLTFDLASQVWLNAHPDPRVLGLATCYLQTYRARQSAVVV*
Ga0099829_101797631	3300009038	Vadose Zone Soil	DWDAIRFSIARASREQIAICFVCELGHAPIEQGKLTFDLASEAWLNAHPDPRVLRLATCYLQTYRDRQSAVIV*
Ga0099828_104510353	3300009089	Vadose Zone Soil	LGYATACPHLPPGRDWDAIRFSVARASGEQITICFVCELDHAPIEHGKLTFELASEAWLNAHPDPRVLRLATCYLQTYRARLSAVLV*
Ga0116220_103037611	3300009525	Peatlands Soil	VSREQVTICFVCELAHAPIEHGTLTFDLASEVWLNAHPDPRVLRLATCYLQTYRARQSAGLI*
Ga0116126_11522911	3300009640	Peatland	REQVAICFVCELAHAPIEHGKLTFDLASEVWLNAHPDPRVLTLANCYLETYRARQRAVLINDL*
Ga0116126_11531061	3300009640	Peatland	ICFVCELAHAPIEHGKLTFDLASEVWLNAHPDPRVLILATCYLQAYRVRRSAALI*
Ga0116106_11958451	3300009645	Peatland	QVTICFVCELGHAPIEQGRLTFDLASEAWVNPHPDPRVLRLATCYLQAYRARQSAVLV*
Ga0116106_12425821	3300009645	Peatland	HRDWDSVRFSVARFSREQVTICFVCELDHAPIEHGKLIFDLTSDAWQDPHPDARVLTLATCYLQAHRERQNALAV*
Ga0116130_11577561	3300009762	Peatland	TACPHLPRHRDWDAIRFSVARVSREQVTICFVCELDHAPIEHGKLTFDLESGTWLSAPLDPRVLRLATCYLETYRGRQSAVLI*
Ga0074044_104815012	3300010343	Bog Forest Soil	GYANACPHLPRRRDWDAIRFSVAQVSREQVAICFVCELDHAPIEHGKLTFDLASEVWLNAHPDPRVLTLANCYLETYRARQRAVLINDL*
Ga0074044_111376592	3300010343	Bog Forest Soil	IRFSVARAGHDQVTIGFVCELAHAPIEHGKLTFDLVSEVWLNAHPDPRVLTLANCYLETYRARQGAALI*
Ga0136449_1034615762	3300010379	Peatlands Soil	GYANACPHLPRLRDWDAIRFSVDQVSRDQITICFVCELAHAPIEHGKLTFDLASEVWLDAHPDPRVLTLANCYLETYRARQRAVLINDL*
Ga0137391_104274673	3300011270	Vadose Zone Soil	QVTLWYVCEKGHAPVEHGKLIFDLASEAWLNAHPDPRVLRLATCYLQAYRGRARFLSDSL
Ga0137391_111899022	3300011270	Vadose Zone Soil	QVTLWYVCEKGHAPVEHGKLIFDLASEAWLNAHPDPRVLRLATCYLQTYRARQSAVLV*
Ga0137393_112616731	3300011271	Vadose Zone Soil	DWDAVRFSVARTSPEQVTICFVCELAHAPIEHGRLTFDLAGEVWLDAHPDPRVLRLATCYLQAYRARQSAVPI*
Ga0137388_101743881	3300012189	Vadose Zone Soil	ACPHLPPRRDWDAIRFSIARASREQIAICFVCELGHAPIEQGKLTFDLASEAWLNAHPDPRVLRLATCYLQTYRDRQSAVIV*
Ga0137366_102298993	3300012354	Vadose Zone Soil	PHLPARRDWDAIRFSVARASAEQVTLHYVCESAHAPADHGKLSFDLVRQLWLNPHPDPRVHRLANCYLETYRARQNHVLI*
Ga0137358_108547041	3300012582	Vadose Zone Soil	HHDWDAVRFSVTRTSSEQVTICFVCELAHAPIEHGILTFDLAGEVWLNAHPDPRVLRLATCYLQAYRARHSAVRI*
Ga0137395_110883751	3300012917	Vadose Zone Soil	GYATACPHLPPRRDWDAIRFSVARASREQITISFVCELGHAPIEHGKLTFDLASEAWLNVHPDPRVLRLATCYLQTYRARQSAVVV*
Ga0137413_117770602	3300012924	Vadose Zone Soil	RDWDAVRFSVARNSSEQITVWYVCELAHAPVEHGKLTFDRIGERWLNPHVDSRVQRLAICYLETYRARLDVTLAPAEGLGITA*
Ga0181533_13100391	3300014152	Bog	PHLPPSRDWDAVRFSVARAGQDQVTIGFVCELAHAPIEHGRLTFDLASGAWLDSHPDPRVLRLATCYLQAYRARQRAVLI*
Ga0181521_101863151	3300014158	Bog	IRFSVAQVSREQVTICFVCELAHAPIEHGKLTFDLASEVWLNAHPDPRVLGLAACYLQTFRARQSALLI*
Ga0181521_103840032	3300014158	Bog	RRRDWDAIRFSVAQVSREQVAICFVCELDHAPIEHGKLTFDLASEVWLNAHPDPRVLTLANCYLETYRARRSAVLI*
Ga0181530_101572811	3300014159	Bog	RRRDWDAIRFSVAQVSREQVAICFVCELDHAPIEHGKLTFDLASEVWLNAHPDPRVLTLANCYLETYRARQRAVLINDL*
Ga0181526_102831283	3300014200	Bog	HVSREQVTICFVCELGHAPIEQGRLTFDLASEAWVNPHPDPRVLRLATCYLQAYRARQSAVLV*
Ga0182021_134237771	3300014502	Fen	RDWDAVRFSVARAGREQVTICFVCELDHAPVEHGELTFDLGREVWLNAHADADARVLTLAGRYLETYRARQSAVLI*
Ga0182021_135016271	3300014502	Fen	RDWDAVRFSVARAGREQVTICFVCELDHAPVEHGELTFDLGSEVWLNAHADARVLTLAGRYLETYRARRSAVLI*
Ga0181522_100577193	3300014657	Bog	LPQHRDWDAIRFSVAQVSSEQLTLNFVCELGHAPIEHGKLTFDLRNDAWKDGPTDPRVLTLASRYIETYRMRQSAAPV*
Ga0187818_100238493	3300017823	Freshwater Sediment	MERDWDAVRFSVASAGREQVTFSYICELGHAPVEHGKLAFDLIRETWLNLHSDSRVQRLAESYLQTYRARQTHAFIE
Ga0187854_100272994	3300017938	Peatland	YATACPHLPPSRDWDAVRFSVARAGQDQVTIGFVCELAHAPIEHGELTFDLASEVWLNAHPDPRVLRLATCYLQTYRARQSAVLI
Ga0187816_102857391	3300017995	Freshwater Sediment	ANACPHLPLRRDWDAIRFSVVQVSRDQVTICFVCELAHAPVKHGKLTFDLAGEIWLNPQPDPRVLSLATCYLQTYRARRS
Ga0187888_12585992	3300018008	Peatland	WDAIRFSVAHVSREQVAICFVCELAHAPIEHGKLTFDLASEVWLNAHPDPRVLILATCYLQAYRVRRSAALI
Ga0187810_101314601	3300018012	Freshwater Sediment	PHLPRRRDWDAIRFAVAQVSREQVAICFVCELAHAPIEHGKLTFDLASEVWLNAHPDPRVLRLANCYLQTYRARRSAVLINDL
Ga0187872_102235882	3300018017	Peatland	GYATACLHLPRRRDWDAVRFSIAHVSREQVTICFTCELDHAPIEHGKLTFDLAGEIWVNAHAHPDPRVLRLATCYLQAYCARTEHCS
Ga0187872_102374141	3300018017	Peatland	RGRDWDAIRFSIAQVSREQVAICFVCELAHAPIEHGKLTFDLASEVWLNAHPDPRVLTLANCYLETYRARQRAVLINDL
Ga0187882_11502991	3300018021	Peatland	RRRDWDAVRFSVARASREQVTVCFVCELAHAPIEHGELTFDLASEAWLTAHPEPRVLRLATCYLQTYRARQSAVII
Ga0187857_101394531	3300018026	Peatland	REQVAICFVCELAHAPIEHGKLTFDLASEVWLNAHPDPRVLILATCYLQAYRVRRSAALI
Ga0187869_101198973	3300018030	Peatland	RRDWDAIRFSVAQVSREQVAICFVCELDHAPIEHGKLTFDLASEVWLNAHPDPRVLTLANCYLETYRARQRAVLINDL
Ga0187869_104278302	3300018030	Peatland	AQVSREQVTICFVCELAHAPIEHGKLTFDLASEVWLNAHPDPRVLGLAACYLQTFRARQSALLI
Ga0187859_104814041	3300018047	Peatland	HRDWDAVRFSLAHVSREQVTICFVCELGHAPLEQGRLTFDLASEAWVNPHPDPRVLRLATCYLQAYRARQSAVLV
Ga0187772_102049041	3300018085	Tropical Peatland	WDAIRFSVAQVSGDLVTVCFVCELAHAPIEHGKLTFDLASEVWLNPHTDPRVLTLATCYLQTYRTRRS
Ga0187770_106517902	3300018090	Tropical Peatland	CPHLPPRRDWDAIRFSVAQVSREQVTVCFVCELAHAPIEHGNLTFDLASEIWLNPHPDPRVLSLATCYLQTYRARRSWQS
Ga0179592_101277231	3300020199	Vadose Zone Soil	TCPHLPQRRDWDAIRFSVARASREQITISFVCELAHAPVEHGKLTFDLASEAWLNAHPDPRVLRLATCYLQTYRARQSAVVV
Ga0210400_103261623	3300021170	Soil	FSVARANREQITICFVCELAHAPIEHGKLTFDLASEAWLNAHPDPRVLRLATCYLQTYLARPSVALL
Ga0210385_104868362	3300021402	Soil	ATACPHLPQERDWDAIRFSISRVSTEQITICFTCESAHAPIEHGKLIFDLATELWINSHSDQRVQTLANCYLHAYRVRQNAVLV
Ga0210385_105384312	3300021402	Soil	VARTSQEQVTICFVCELAHAPIEHGELTFDLMSEVWLNAFPDPRVLTLANCYLQAYRARQSASSHLTVYE
Ga0210394_117138511	3300021420	Soil	PPRRDWDAIRFSVARASQEQITICFVCELAHAPVEHGKLTFDLASEAWLNAHPDPRVLRLATCYLQTYLARPSAVLV
Ga0210384_109602481	3300021432	Soil	PPRREWDAVRFSMAHVSPERITICFVCELAHAPIESGNLTFDLSGKVLLDATVASDADSHNDPRVVRLATSYLQAYRARHNF
Ga0224545_10617461	3300022881	Soil	VRFSVANANASQLTLWYACERDHAPIEHGKLTFDLLSEAWLNTHPDPRMLRLASCYLQAYRARQGVVPVVVPI
Ga0208478_10835751	3300025475	Arctic Peat Soil	ARTSREQVTICFVCELAHAPIEHGKLTFDLANEVWRNAHPDPRVLSLATCYLESYRARQSAFLSNTL
Ga0208191_10064981	3300025496	Peatland	AICFVCELAHAPIEHGKLTFDLASEVWLNAHPDPRVLILATCYLQAYRVRRSAALI
Ga0208188_10842461	3300025507	Peatland	ATACPHLPRRRDWDAVRFSIAHVSREQVTICFTCELDHAPIEHGKLTFDLAGEVWVNAHAHPDPRVLRLATCYLQAYRARAEHCS
Ga0208820_100198110	3300025576	Peatland	LGYANACPHLPRGRDWDAIRFSIAQVSREQVAICFVCELAHAPIEHGKLTFDLASEVWLNAHPDPRVLTLANCYLETYRARQRAVLINDL
Ga0207646_104834233	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LGYATACPHLPPRRDWDAIRFSVANANANQVTLWYVCEKDHAPVEHGRLIFDLASEAWLNVHPDPRVLRLATCYLQAYRARQSAVLV
Ga0209839_102901491	3300026294	Soil	TICFVCELAHAPIEHGKLTFDLANEVWRNAHPDPRVLSLATCYLESYRARQSAFLSNTL
Ga0257150_10600811	3300026356	Soil	AIRLSVARASREQITISFVCELGHAPIEHGKLTFDLASEAWLNAHPDPRVLRLAICYLQTYRTRQSGVTV
Ga0257178_10437021	3300026446	Soil	LTLSFVCELGHAPVEYGKLTFDLAAEVWLRTHHDARVLRLATCYMQTYRARQSPVVI
Ga0257160_10053641	3300026489	Soil	PHLPNSCDWDAIRFSVAHVSREQLTLSFVCELGHAPVEYGKLTFDLAAEVWLRTHHDARVLRLATCYMQTYRARQSPVVI
Ga0257157_10234361	3300026496	Soil	ASQEQVTICFVCELGHAPIEHGKLTFDLASDAWLNVHPDPRVLRLATCYLQTYRARQSAVVV
Ga0208725_10622921	3300027158	Forest Soil	SVARVSPEQVTISFVCEFAHAPIEHGKLTFDTVGEAWLNAHTDPRIIRLAASYLQTYRARQGAALI
Ga0209904_10007934	3300027394	Thawing Permafrost	DWDAIRFSVARAGREQVTITFVCELDHAPIEHGKLVLDLASGAWLNPYPDPRVLRLANCYLQTFRARESAVLV
Ga0209332_10475171	3300027439	Forest Soil	PPRRDWDAIRFSVARASREQITICFVCELAHAPVEHGKLTFDLASEAWLNAHPDPRVLRLATCYLQTYLARPSAVLV
Ga0207761_10921132	3300027516	Tropical Forest Soil	RLPAARDWDAVRFSVAGASAEQIALWYVCERDHGPIEHGKLTFDLLRRSWHDPHPDPRVQRLAACYLETWQARQIPNGDHP
Ga0209735_10362353	3300027562	Forest Soil	RFSVARASQEQVTICFVCELDHAPIEHGKLAFDLASEAWLSAHPDPRVLRLATCYLQTYRARQSAVLV
Ga0208043_10145751	3300027570	Peatlands Soil	FSVDQVSRDQITICFVCELAHAPIEHGKLTFDLASEVWLDAHPEPRVLTLANCYLETYRARQRAVLINDL
Ga0209331_11491321	3300027603	Forest Soil	ACPHLPPRRDWDAIRFSVARASAEQITICFVCELGHAPIEYGKLTFDLASEAWLNAHPDPRVLRLATCYLQTYRARQSAVLV
Ga0209528_10155631	3300027610	Forest Soil	VARASQEQITICFVCELAHAPIEHGKLTFDLASEAWLNAHPDPRVLRLATCYLQTYLARPSAVLV
Ga0209118_10542501	3300027674	Forest Soil	TISFVCELGHAPIEHGKLTFDLASEAWLNAHPDTRVLRLATCYLQTYRARQSAVVV
Ga0209333_11172491	3300027676	Forest Soil	SPGQVAICFVCELGHAPVEQGRLVFDLTNEVWLNVHPDPRVLRLATSFLQSYRTRQKAAA
Ga0209011_11430081	3300027678	Forest Soil	HVSRERVTICFVCELGHAPIEHGKLTFDLASEAWLNAHPDPRVLRLASCYLQAYRARQSAALI
Ga0209447_101578471	3300027701	Bog Forest Soil	PEQITIHFVCELAHAPIENGRLTFDLVREFWLNAHPDSRVLTLANCYLQTYRARQSAVLV
Ga0209908_101621851	3300027745	Thawing Permafrost	SQITICFVCELAHAPIEHGKLTFDLAGEVWLNAGADPRVLTLANCYLQTYRARQSAVFI
Ga0209180_103386492	3300027846	Vadose Zone Soil	TACPHLPPRRDWDAIRFSIARASREQIAICFVCELGHAPIEHGKLTFDLASEAWLNAHPDPRVLRLATCYLQTYRDRQSAVIV
Ga0209180_107100922	3300027846	Vadose Zone Soil	RRDWDAVRFSVARTSPEQVTICFVCELAHAPIEHGRLTFDLAGEVWLDAHPDPRVLRLATCYLQAYRARQSAVPI
Ga0209274_105690302	3300027853	Soil	GGQVTICFVCELGHAPIEHGKLTFDLTGDNWVNTHPDPRVLTLASSYLQAYRARQSAVIF
Ga0209380_102226951	3300027889	Soil	VARANREQITICFVCELAHAPIEHGKLTFDLASEAWLNAHPDPRVLRLATCYLQTYLARPSVALL
Ga0302219_102251112	3300028747	Palsa	LPRHRDWDAIRFSIARSRHDQVTICFVCEFGHAPVDHGHLTFDLRSEAWVNPSPDQRVLTLATSYLEVYRARQSAIVIDQV
Ga0302219_103749301	3300028747	Palsa	MRFSVAQISPGQVAICFVCELGHAPVEQGRLVFDLTNEVWLNVHPDPRVLRLATSFLQSY
Ga0302303_102282641	3300028776	Palsa	MRFSVAQISPGQVAICFVCELGHAPVEQGRLVFDLTNEVWLNVHPDPRVLRLATSFLQSYRTRQKAAAA
Ga0302222_101777442	3300028798	Palsa	SRKQITIRFVCELAHAPIEHGKLTFDVAGEVWLNADADPRVLTLANCYLQTYRARQSAVF
Ga0302228_102351551	3300028808	Palsa	TERDCDAMRFSVAQISPGQVAICFVCELGHAPVEQGRLVFDLTNEVWLNVHPDPRVLRLATSFLQSYRTRQKAAAA
Ga0311370_114111341	3300030503	Palsa	RKQITIRFVCELAHAPIEHGKLTFDVAGEVWLNADADPRVLTLANCYLQTYRARQSAVFI
Ga0311357_105203783	3300030524	Palsa	AIRFSVAHASRKQITIRFVCELAHAPIEHGKLTFDLAGEVWLNADADPRVLTLANCYLQTYRARQSAVFI
Ga0311357_105295913	3300030524	Palsa	TICFVCEFGHAPVDHGHLTFDLRSEAWVNPSPDQRVLTLATSYLEVYRARQSAIVIDQV
Ga0311356_106533481	3300030617	Palsa	RFSVAQISPGQVAICFVCELGHAPVEQGRLVFDLTNEVWLNVHPDPRVLRLATSFLQSYRTRQKAAAA
Ga0310038_102101431	3300030707	Peatlands Soil	SRDWDAVRFSVARAGQDQVTIAFVCELAHAPIEHGQLTFDLVSEVWLNSHSDPRVLTLAACYLEAYRARQGAALI
Ga0302314_114333902	3300030906	Palsa	ERDCDAMRFSVAQISPGQVAICFVCELGHAPVEQGRLVFDLTNEVWLNVHPDPRVLRLATSFLQSYRTRQKAAAA
Ga0170834_1051936581	3300031057	Forest Soil	ICFVCELEHAPIEHGELTFDLASEAWLNAHPDPRVLRLASCYLQTYRARRAQFSSDDYE
Ga0302323_1009325541	3300031232	Fen	QVTICFVCELDHAPVEHGELTFDLGREVWLNAHADADARVLTLAGRYLETYRARQSAVLI
Ga0265340_101074691	3300031247	Rhizosphere	ARAGREQVTICFVCELDHAPVEHGELTFDLGSEVWLNAHADARVLTLAGRYLETYRARRSAVLI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096176

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences