Metagenome / Metatranscriptome Family F096149

Overview

Basic Information

• Family ID: F096149
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 105
• Average Sequence Length: 45 residues
• Representative Sequence: LPPFLQHEVFNTGAGECQVQTLLAKAQPMRPQYADPELLKLQAEVG
• Number of Associated Samples: 89
• Number of Associated Scaffolds: 105

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 12.38 %
• % of genes near scaffold ends (potentially truncated): 88.57 %
• % of genes from short scaffolds (< 2000 bps): 94.29 %
• Associated GOLD sequencing projects: 81
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (82.857 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.714 % of family members)
• Environment Ontology (ENVO): Unclassified (46.667 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (40.952 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 12.16%
  β-sheet: 8.11%
  Coil/Unstructured: 79.73%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF03069	FmdA_AmdA	20.00
PF04115	Ureidogly_lyase	8.57
PF12974	Phosphonate-bd	7.62
PF01494	FAD_binding_3	3.81
PF01979	Amidohydro_1	1.90
PF00848	Ring_hydroxyl_A	1.90
PF00890	FAD_binding_2	1.90
PF00355	Rieske	1.90
PF00296	Bac_luciferase	1.90
PF07883	Cupin_2	1.90
PF00171	Aldedh	0.95
PF04073	tRNA_edit	0.95
PF01977	UbiD	0.95
PF03972	MmgE_PrpD	0.95
PF08352	oligo_HPY	0.95
PF13181	TPR_8	0.95
PF13416	SBP_bac_8	0.95
PF13361	UvrD_C	0.95
PF00211	Guanylate_cyc	0.95
PF00392	GntR	0.95
PF00120	Gln-synt_C	0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	20.00
COG3194	Ureidoglycolate hydrolase (allantoin degradation)	Nucleotide transport and metabolism [F]	8.57
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	7.62
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	3.81
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	3.81
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	3.81
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	3.81
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.90
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.95
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.95
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.95
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.95
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.95
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.95

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.86 %
Unclassified	root	N/A	17.14 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.86 %
Unclassified	root	N/A	17.14 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.86 %
Unclassified	root	N/A	17.14 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	54.29 %
Unclassified	root	N/A	17.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.95 %
Unclassified	root	N/A	17.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.76 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.14 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	12.38 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.43 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	4.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.14 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	11.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.43 %
Sterolibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae	4.76 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	2.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.90 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.95 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.14 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	11.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.43 %
Methyloversatilis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis	4.76 %
Prochlorotrichaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae	2.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.90 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.95 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.14 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	11.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.43 %
Methyloversatilis universalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis	4.76 %
Halomicronema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae → Halomicronema	2.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.90 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.95 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.14 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	11.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.43 %
Methyloversatilis universalis FAM5	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis → Methyloversatilis universalis FAM5	4.76 %
unclassified Halomicronema	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae → Halomicronema → unclassified Halomicronema	2.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.90 %
Bradyrhizobium sp. OHSU_III	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. OHSU_III	0.95 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.14 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	11.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.43 %
Methyloversatilis universalis FAM5	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis → Methyloversatilis universalis FAM5	4.76 %
Halomicronema sp. CCY15110	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae → Halomicronema → unclassified Halomicronema → Halomicronema sp. CCY15110	2.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.90 %
Bradyrhizobium sp. OHSU_III	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. OHSU_III	0.95 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001545|JGI12630J15595_10041665	All Organisms → cellular organisms → Bacteria	929
3300004082|Ga0062384_101111035	Not Available	571
3300004091|Ga0062387_101707210	Not Available	511
3300004092|Ga0062389_102141319	All Organisms → cellular organisms → Bacteria → Proteobacteria	734
3300004092|Ga0062389_102992032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632
3300004635|Ga0062388_101863377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619
3300005436|Ga0070713_100185199	All Organisms → cellular organisms → Bacteria	1873
3300005437|Ga0070710_11072768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	590
3300005445|Ga0070708_100583275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1054
3300005534|Ga0070735_10359748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	873
3300005764|Ga0066903_100301195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. OHSU_III	2537
3300005881|Ga0075294_1035644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525
3300006163|Ga0070715_10019359	All Organisms → cellular organisms → Bacteria	2610
3300006173|Ga0070716_100017664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3702
3300006175|Ga0070712_101271503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641
3300006176|Ga0070765_101758011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	582
3300009697|Ga0116231_10046929	All Organisms → cellular organisms → Bacteria	3205
3300010376|Ga0126381_101976688	Not Available	840
3300010376|Ga0126381_103856778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	585
3300012202|Ga0137363_11443876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	578
3300012685|Ga0137397_10426851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	987
3300014658|Ga0181519_10842508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567
3300016387|Ga0182040_10955955	All Organisms → cellular organisms → Bacteria	713
3300016404|Ga0182037_11320458	All Organisms → cellular organisms → Bacteria	636
3300016445|Ga0182038_10388030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1167
3300017955|Ga0187817_10177197	All Organisms → cellular organisms → Bacteria → Proteobacteria	1357
3300017974|Ga0187777_10940842	All Organisms → cellular organisms → Bacteria	623
3300018433|Ga0066667_11831364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	550
3300020580|Ga0210403_10693967	Not Available	816
3300020583|Ga0210401_10372411	All Organisms → cellular organisms → Bacteria	1290
3300021178|Ga0210408_10078511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2587
3300021358|Ga0213873_10159045	All Organisms → cellular organisms → Bacteria	684
3300021388|Ga0213875_10302741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757
3300021405|Ga0210387_11701252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534
3300021406|Ga0210386_11431461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578
3300021479|Ga0210410_11209232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647
3300022726|Ga0242654_10208927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	682
3300022726|Ga0242654_10317327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	578
3300025898|Ga0207692_11061216	All Organisms → cellular organisms → Bacteria → Acidobacteria	536
3300025906|Ga0207699_10217980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1301
3300025915|Ga0207693_10661797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	811
3300025928|Ga0207700_10890954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	796
3300026498|Ga0257156_1091163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633
3300027102|Ga0208728_102773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575
3300027167|Ga0208096_108054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	548
3300027388|Ga0208995_1042726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae → Halomicronema → unclassified Halomicronema → Halomicronema sp. CCY15110	797
3300027737|Ga0209038_10074310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae → Halomicronema → unclassified Halomicronema → Halomicronema sp. CCY15110	1020
3300027745|Ga0209908_10210593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535
3300027795|Ga0209139_10369524	All Organisms → cellular organisms → Bacteria → Proteobacteria	501
3300027879|Ga0209169_10391037	Not Available	731
3300027986|Ga0209168_10178827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1067
3300028536|Ga0137415_10454181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1087
3300030617|Ga0311356_11605712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585
3300031446|Ga0170820_11115105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1495
3300031543|Ga0318516_10495716	All Organisms → cellular organisms → Bacteria	701
3300031543|Ga0318516_10607869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	624
3300031544|Ga0318534_10239399	All Organisms → cellular organisms → Bacteria	1047
3300031545|Ga0318541_10510701	All Organisms → cellular organisms → Bacteria	672
3300031546|Ga0318538_10551134	All Organisms → cellular organisms → Bacteria → Proteobacteria	625
3300031573|Ga0310915_10412339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis → Methyloversatilis universalis FAM5	959
3300031640|Ga0318555_10345907	Not Available	805
3300031680|Ga0318574_10820342	Not Available	545
3300031682|Ga0318560_10337789	Not Available	813
3300031682|Ga0318560_10433696	All Organisms → cellular organisms → Bacteria	711
3300031682|Ga0318560_10591074	Not Available	601
3300031708|Ga0310686_118518603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2074
3300031713|Ga0318496_10159556	All Organisms → cellular organisms → Bacteria → Proteobacteria	1233
3300031736|Ga0318501_10068158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1712
3300031763|Ga0318537_10063512	All Organisms → cellular organisms → Bacteria → Proteobacteria	1349
3300031763|Ga0318537_10362386	Not Available	535
3300031765|Ga0318554_10152828	All Organisms → cellular organisms → Bacteria	1311
3300031771|Ga0318546_10619720	Not Available	761
3300031771|Ga0318546_10629373	All Organisms → cellular organisms → Bacteria	755
3300031793|Ga0318548_10136062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1193
3300031797|Ga0318550_10210795	All Organisms → cellular organisms → Bacteria → Proteobacteria	941
3300031797|Ga0318550_10416809	All Organisms → cellular organisms → Bacteria	650
3300031821|Ga0318567_10256537	All Organisms → cellular organisms → Bacteria → Proteobacteria	982
3300031833|Ga0310917_10347504	All Organisms → cellular organisms → Bacteria	1006
3300031835|Ga0318517_10115276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1187
3300031890|Ga0306925_12242662	All Organisms → cellular organisms → Bacteria	506
3300031910|Ga0306923_10551133	Not Available	1299
3300031912|Ga0306921_10762262	All Organisms → cellular organisms → Bacteria	1108
3300031941|Ga0310912_10450319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis → Methyloversatilis universalis FAM5	1003
3300031941|Ga0310912_11407823	All Organisms → cellular organisms → Bacteria	526
3300031946|Ga0310910_10822637	Not Available	731
3300031947|Ga0310909_10341238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1257
3300031947|Ga0310909_10899289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727
3300031947|Ga0310909_11400403	Not Available	559
3300031954|Ga0306926_10497292	All Organisms → cellular organisms → Bacteria → Proteobacteria	1499
3300031954|Ga0306926_11428743	All Organisms → cellular organisms → Bacteria	801
3300032010|Ga0318569_10317044	Not Available	726
3300032035|Ga0310911_10445498	Not Available	750
3300032044|Ga0318558_10260919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis → Methyloversatilis universalis FAM5	854
3300032051|Ga0318532_10364916	Not Available	513
3300032059|Ga0318533_10381247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis → Methyloversatilis universalis FAM5	1029
3300032060|Ga0318505_10204596	All Organisms → cellular organisms → Bacteria	924
3300032089|Ga0318525_10325086	All Organisms → cellular organisms → Bacteria	790
3300032090|Ga0318518_10186798	Not Available	1059
3300032205|Ga0307472_101756405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615
3300032261|Ga0306920_100825436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1359
3300032261|Ga0306920_100927174	All Organisms → cellular organisms → Bacteria	1272
3300032261|Ga0306920_102506335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis → Methyloversatilis universalis FAM5	709
3300032896|Ga0335075_11126658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689
3300032896|Ga0335075_11719809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509
3300034268|Ga0372943_0890236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae → Halomicronema → unclassified Halomicronema → Halomicronema sp. CCY15110	592

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.14%
Host-Associated	Host-Associated	2.86%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.57%
Aquatic	Environmental → Aquatic	8.57%
Plants	Host-Associated → Plants	2.86%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.62%
Freshwater	Environmental → Aquatic → Freshwater	8.57%
Peat	Environmental → Terrestrial → Peat	0.95%
Roots	Host-Associated → Plants → Roots	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.95%
Peat Moss	Host-Associated → Plants → Peat Moss	0.95%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Loam	Environmental → Terrestrial → Soil → Loam	16.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.95%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.95%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.95%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.95%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.95%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.95%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.95%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.95%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.95%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005881	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_202	Environmental
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental
3300009697	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MG	Host-Associated
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental
3300027102	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF028 (SPAdes)	Environmental
3300027167	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF034 (SPAdes)	Environmental
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental
3300030617	II_Palsa_N2 coassembly	Environmental
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100416651	3300001545	Forest Soil	FNNGPGDCHVQTLLAKSQPLRPQYADPELLELQAAQG*
Ga0062384_1011110352	3300004082	Bog Forest Soil	FLQHEVFNEGAGDCHLQTMLAKPQPLRPHYNNRELLKLQAAEG*
Ga0062387_1017072102	3300004091	Bog Forest Soil	FLQHEVFNEGTGDCHLQTMLAKPQPLRPHYNDPELLKLQSAEG*
Ga0062389_1021413193	3300004092	Bog Forest Soil	HEIFNDGPGDCHVQTLLAKPQPLRPQYADPELLELQAAQG*
Ga0062389_1029920321	3300004092	Bog Forest Soil	LQHEVLNVGAVECHVQTMLAHPTPLRPSYADPELLKLQAAGDK*
Ga0062388_1018633771	3300004635	Bog Forest Soil	EKWDLIACPPFMNHEIVNDGTETCHVQTLLSKAEPLRPQYRDPELLKLQAAVT*
Ga0070713_1001851991	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	FLQDEVFNEGDNICHRQTLLARPQPLRPQYNNPELLKLQAAIP*
Ga0070710_110727681	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	IRLGRWDLVCLPPFLRHEVFNEGSSDCHLQTLLAKPQPLRPQYADPELLRLQAAAG*
Ga0070708_1005832752	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DLVVLPPFLQDEVFNEGDNICHRQTLLARPQPLRPQYNDPELLKLQAAIP*
Ga0070735_103597482	3300005534	Surface Soil	QHEVLNDGAGDCHVQTLLSKPQPLRPNYADPELLRLQEADAARRS*
Ga0066903_1003011951	3300005764	Tropical Forest Soil	WDLIACPPSVHHEIINDGDETCHVQTLLSKPQPLRPQYRDPELLKLQAAVS*
Ga0075294_10356441	3300005881	Rice Paddy Soil	IACPPFVHHEIVNDGNETCHVQTLLSKAVPLRPQYRDPELLKLQAAVP*
Ga0070715_100193594	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VLPPFLQDEVFNEGNNICHPQTLLARPQPLRPQYNNPELLKLQAAIP*
Ga0070716_1000176642	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VLPPFLQDEVFNEGDNICHRQTLLARPQPLRPQYNDPELLKLQAAIP*
Ga0070712_1012715031	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LPPLMQHEVFNTGSGDCQVQTLLAKPQPLRPQYADPELLKLQAAVA*
Ga0070765_1017580111	3300006176	Soil	VLPPFLQDEVFNEGDNICHRQTLLARPQPLRPQYNDPELLKLQAAIQ*
Ga0116231_100469295	3300009697	Host-Associated	MKLPVGLQHELHNTGDIDCQVQTLLSAPAPRRPHYNDPELLALQAAV*
Ga0126381_1019766883	3300010376	Tropical Forest Soil	VRWDFVCFSPFLQHEVFNTSPGECHLQTLLAKPKPLRPQYADPELLKVQAAEG*
Ga0126381_1038567781	3300010376	Tropical Forest Soil	TLGRWDLVALPPFLQHEVFNEGKVICHLQTMLAKPRPLRPQYNDPELLALQAEQG*
Ga0137363_114438763	3300012202	Vadose Zone Soil	LPPFLSHEIFNNGPGDCHVQTLLAKPQPLRPQYADPELLELQAAQG*
Ga0137397_104268513	3300012685	Vadose Zone Soil	VALPPFLQHEVFNAGTGDCQLQTLLAKAKPLRPQYADPDLLKLQAEQG*
Ga0181519_108425081	3300014658	Bog	LKLPVGLQHELHNTGEVDCQVQTLLSAPKPLRPQYNDPELLALQAQVA*
Ga0182040_109559551	3300016387	Soil	ISLGRWDLVCLPPFLRHEVFNTGAGECQVQTLLAKAQPMRPQYADPELLKLQAAVP
Ga0182037_113204582	3300016404	Soil	CLPPYLQHEVFNTGASECQVQTLLAKAQPKRPQYADPELLKLQAEVG
Ga0182038_103880301	3300016445	Soil	TGAGECQVQTLLAKAQPMRPQYADPELLKLQTEVG
Ga0187817_101771971	3300017955	Freshwater Sediment	NTGAGECQVQTLLAKAQPLRPQYADPALLKLQAEVG
Ga0187777_109408422	3300017974	Tropical Peatland	GKWDLIACPPFTHHEIINDGTEECHVQTLLSKTQPMRPQYKDAELLKLQAAVP
Ga0066667_118313641	3300018433	Grasslands Soil	WDLVGLPSFLRHEVFNEGSSDCHLQTLLAKPQPLRPQYADPELLRLQAAAG
Ga0210403_106939671	3300020580	Soil	PPFLQHEVFNEGTCDCHLQTMLAKPQPLRPHYNDPELLRLQATEG
Ga0210401_103724113	3300020583	Soil	DLVALPPFLQHEVFNTGSGDCQLQTLLAKPQPLRPQYADPELLKLQAAQG
Ga0210408_100785113	3300021178	Soil	LSRWDLVALPPFLHHEIFNDGAGDCHIQTLLAKPQPLRPQYADPELLELQAAQG
Ga0213873_101590451	3300021358	Rhizosphere	FNTGSGDCQLQTLLAKPQPLRPQYADPELLKLQAAQG
Ga0213875_103027411	3300021388	Plant Roots	LGRWDLVCLPPFLQHEVFNTGSGDCQVQTLLAKPQPLRPQYADPELLALQAAQG
Ga0210387_117012522	3300021405	Soil	HEVFNTGSGDCQVQTLLAKPQPLRPQYADPELLKLQAAVA
Ga0210386_114314612	3300021406	Soil	SAGDNICHRQTLLARPQPLRPQYNDPELLKLQAAIP
Ga0210410_112092322	3300021479	Soil	CLPPFMQHEVFNTGSGDCQVQTLLAKPQPLRPQYADPELLKLQAAVA
Ga0242654_102089272	3300022726	Soil	RWDLVCLPPFIQHEVFNTGSGDCQVQTLLAKPQPLRPQYADPELLKLQAARA
Ga0242654_103173271	3300022726	Soil	VFNAGAGDCQLQTLLAKAKPLRPQYADPDLLKLQAQAG
Ga0207692_110612162	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LRYASVQQRLPPFLRHEVFNEGSSDCHLQTLLAKPQPLRPQYADPELLRLQAAAG
Ga0207699_102179801	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VLPPFLQDEVFNEGDNICHRQTLLARPQPLRPQYNDPELLKLQA
Ga0207693_106617972	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RWDLVCLPPLMQHEVFNTGSGDCQVQTLLAKPQPLRPQYADPELLKLQAAVA
Ga0207700_108909541	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TLGRGDLVVLPPFLQDEVFNEGDNICHRQTLLARPQPLRPQYNDPELLKLQAAIP
Ga0257156_10911631	3300026498	Soil	MQHEVFNTGSGDCQVQTLLAKPQPLRPQYADPELLKLQAAVA
Ga0208728_1027731	3300027102	Forest Soil	FLNHEIFNNGPGDCHVQTLLAKSQPLRPQYADPELLELQAAQG
Ga0208096_1080542	3300027167	Forest Soil	LPPFLNHEIFNNGPGDCHVQTLLAKSQPLRPQYADPELLELQAAQG
Ga0208995_10427263	3300027388	Forest Soil	IRLGRWDLVCLPPFLRHEVFNEGSGDCHLQTLLAKPQPLRPQYADPELLRLQAAAG
Ga0209038_100743101	3300027737	Bog Forest Soil	LGRWDLVALPPFLNHEIFNDGPGDCHVQTLLAKPQPLRPQYADPELLELQAAQG
Ga0209908_102105931	3300027745	Thawing Permafrost	RDRYNTGDVDCQVQTLLSAPQPRRPRYEDPELLALQAAVPQLVPG
Ga0209139_103695241	3300027795	Bog Forest Soil	LVALPPFLNHEIFNDGPGDCHVQTLLAKPQPLRPQYADPELLELQASQG
Ga0209169_103910371	3300027879	Soil	VSDLVALPPFVQHEVFNEGAGECHLQTMLAKPQPLRPQYSDPEL
Ga0209168_101788272	3300027986	Surface Soil	QHEVLNDGAGDCHVQTLLSKPQPLRPNYADPELLRLQEADAARRS
Ga0137415_104541813	3300028536	Vadose Zone Soil	VALPPFLQHEVFNAGTGDRQLQTLLAKAKPLRPQYADPDLLKLQAEQG
Ga0311356_116057122	3300030617	Palsa	NVGAVECHVQTMLAHPTPLRPNYADPKLLELQAGEGKP
Ga0170820_111151051	3300031446	Forest Soil	GRVFNEGDNICHWQTLLARPQPLRPQYNDPELLKLQAAIP
Ga0318516_104957163	3300031543	Soil	ISLGRWDLVCLPPFLHHEVFNTGAGECQVQTLLAKAQPMRPQYADPELLKLQAEVG
Ga0318516_106078692	3300031543	Soil	RWDLVCLPPFLQHEVFNTGSGECQLQTLLAKPQPLRPQYADPELLKLQAAV
Ga0318534_102393991	3300031544	Soil	LPPFLQHEVFNTGAGECQVQTLLAKAQPMRPQYADPELLKLQAEVG
Ga0318541_105107011	3300031545	Soil	PPFLQHKVFNEGEAICHLQTMLAKPQPPPPQYNDPRLLGLRAKEG
Ga0318538_105511341	3300031546	Soil	VCLPPFLRHEVFNTGAGECQVQTLLAKAQPMRPQYADPELLKLQAAVP
Ga0310915_104123392	3300031573	Soil	FNTGASECQVQTLLAKAQPMRPQYADPELLKLQAAVP
Ga0318555_103459072	3300031640	Soil	NHEIVNDGPGDCHVQTLLAKPQPLRPQYADPQLLELQAAQG
Ga0318574_108203422	3300031680	Soil	VSPFLQHEIFNTSPGECHLQTLLAKPKPLRPQYADPELLK
Ga0318560_103377891	3300031682	Soil	ALPPFLNHEIFNDGPGDCHVQTLLAKPQPLRPQYADPQLLELQAAQG
Ga0318560_104336962	3300031682	Soil	HEVFNTGVGECQVQTLLAKAQPLRPQYADPELLKLQAEVG
Ga0318560_105910741	3300031682	Soil	VSAFPQQEVFNTSPGECHLQTLLAKPKPLRPQYANPEL
Ga0310686_1185186034	3300031708	Soil	ALPPFLQHEVFNEGAEICHLQTMLAKSQPLRPQYNDPKLLELQSEIA
Ga0318496_101595562	3300031713	Soil	LRHEVFNTGASECQVQTLLAKAQPMRPQYADPELLKLQAAVP
Ga0318501_100681581	3300031736	Soil	FNTGASECQVQTLLAKAQPKRPQYADPELLKLQAEVG
Ga0318537_100635121	3300031763	Soil	QHEVFNTGAGECQVQTLLAKAQPMRPQYADPELLKLQAEVG
Ga0318537_103623862	3300031763	Soil	LSPFLQHEVFNTSPGECHLQTLLAKPKPLRPQYADPELLKVQAAEG
Ga0318554_101528281	3300031765	Soil	RWDLVCLPPFLQHEVFNTGAGECHVQTLLAKAQPLRPQYADPELLKLQAEVG
Ga0318546_106197201	3300031771	Soil	LGRWDLVALPPFLNHEIVNDGPGDCHVQTLLAKPQPLRPQYADPQLLELQAAQG
Ga0318546_106293731	3300031771	Soil	DLVCLPPFLQHEVFNTGASECQVQTLLAKAQPKRPQYADPELLKLQAEVG
Ga0318548_101360623	3300031793	Soil	VRWDLVCVSPFLQHEVFNTSPGECHLQTLLAKPKPLRPQYADPELLKVQAAEG
Ga0318550_102107952	3300031797	Soil	DIALGRWDLVCLPPFLQHEVFNTGVGECQVQTLLAKAQPLRPQYADPELLKLQAEVG
Ga0318550_104168091	3300031797	Soil	FNTGAGECQVQTLLAKAQPMRPQYADPELLKLQAAVP
Ga0318567_102565371	3300031821	Soil	DISLGRWDLVCLPPFLRHEVFNTGASECQVQTLLAKAQPMRPQYADPELLKLQAAVP
Ga0310917_103475042	3300031833	Soil	VCLPPYLQHEVFNTGASECQVQTLLAKAQPKRPQYADPELLKLQAEVG
Ga0318517_101152763	3300031835	Soil	LSPFLQHEVFNTSPGECHLQTLLAKPKPLRPQYADPELLKVQA
Ga0306925_122426621	3300031890	Soil	FNTGAGECQVQTLLAKAQPMRPQYADPELLKLQAEVG
Ga0306923_105511331	3300031910	Soil	SPFLQHEVFNTSPGECHLQTLLAKPKPLRPQYADPELLKVQAAEG
Ga0306921_107622621	3300031912	Soil	PFLRHEVFNTGAGECQVQTLLAKAQPMRPQYADPELLKLQAAVP
Ga0310912_104503191	3300031941	Soil	EVFNTGASECQVQTLLAKAQPMRPQYADPELLKLQAAVP
Ga0310912_114078231	3300031941	Soil	CLPPFLQHEVFNTGVGECQVQTLLAKAQPLRPQYADPELLKLQAEVG
Ga0310910_108226371	3300031946	Soil	LNHEIVNDGPGDCHVQTLLAKPQPLRPQYADPQLLELQAAQG
Ga0310909_103412383	3300031947	Soil	VRWDLVCVSAFPQQEVFNTSPGECHLQTLLAKPKPLRPQYADPELLKVQAAEG
Ga0310909_108992892	3300031947	Soil	FNEGDGECHLQTLLAKPQPLRPQYADPELLRLQSAEG
Ga0310909_114004031	3300031947	Soil	LSPFLQHEVFNTSPGECHLQTLLAKPKPLRPQYADPELLKVQARRD
Ga0306926_104972922	3300031954	Soil	LPPFLRHEVFNTGAGECQVQTLLAKAQPMRPQYADPELLKLQAAVP
Ga0306926_114287434	3300031954	Soil	HEVFNTGAGECQVQTLLAKAQPMRPQYADPELLKLQAEVG
Ga0318569_103170443	3300032010	Soil	VSPFLQHEVFNTSPGECHLQTLLAKPKPLRPQYADPELLKVQ
Ga0310911_104454983	3300032035	Soil	VSPFLQHEIFNTSPGECHLQTLLAKPKPLRPQYADPELLKVQA
Ga0318558_102609192	3300032044	Soil	FNTGVGECQVQTLLAKAQPLRPQYADPELLKLQAEVG
Ga0318532_103649161	3300032051	Soil	LQHEVFNTSPGECHLQTLLAKPKPLRPQYADPELLKVQAAEG
Ga0318533_103812473	3300032059	Soil	VFNTGVGECQVQTLLAKAQPLRPQYADPELLKLQAEVG
Ga0318505_102045961	3300032060	Soil	VFNTGAGECHVQTLLAKAQPLRPQYADPELLKLQAEVG
Ga0318525_103250861	3300032089	Soil	QHEVFNTGAGECHVQTLLAKAQPLRPQYADPELLKLQAEVG
Ga0318518_101867981	3300032090	Soil	DLVALPPFLNHEIVNDGPGDCHVQTLLAKPQPLRPQYADPQLLELQAAQG
Ga0307472_1017564051	3300032205	Hardwood Forest Soil	VCLPPFMQHEVFNTGSGDCQVQTLLAKPQPLRPQYADPELLKLQAAVA
Ga0306920_1008254361	3300032261	Soil	VSAFPQQEVFNTSPGECHLQTLLAKPKPLRPQYADPELLKVQA
Ga0306920_1009271742	3300032261	Soil	FNDGPGDCHVQTLLAKPQPLRPQYADPQLLELQAAQG
Ga0306920_1025063352	3300032261	Soil	ELFNTGAGECQVQTLLAKAQPMRPQYADPELVRRQAEVG
Ga0335075_111266582	3300032896	Soil	LQHELHNTGDVDCQVQTLLSAPRPRRPQYDDPELLALQAAASQPVLA
Ga0335075_117198092	3300032896	Soil	EVFNEGAEICHLQTMLAKPQPLRPQYNDPKLLELQAEIA
Ga0372943_0890236_468_590	3300034268	Soil	HEVFNEGSADCQLQTLLAKPQPRRPQYADPKLLTLQAKAG