NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F096145

Metagenome / Metatranscriptome Family F096145

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096145
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 107 residues
Representative Sequence VTELELLRRRRDLVLLSAELQRATIVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK
Number of Associated Samples 90
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 62.86 %
% of genes near scaffold ends (potentially truncated) 39.05 %
% of genes from short scaffolds (< 2000 bps) 81.90 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (77.143 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(12.381 % of family members)
Environment Ontology (ENVO) Unclassified
(48.571 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(65.714 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 70.59%    β-sheet: 0.00%    Coil/Unstructured: 29.41%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF07043DUF1328 51.43
PF07332Phage_holin_3_6 14.29
PF05957DUF883 13.33
PF05433Rick_17kDa_Anti 5.71
PF07730HisKA_3 2.86
PF00072Response_reg 1.90
PF00563EAL 1.90
PF00196GerE 0.95
PF00990GGDEF 0.95
PF00342PGI 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG5487Uncharacterized membrane protein YtjA, UPF0391 familyFunction unknown [S] 51.43
COG4575Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 familyTranslation, ribosomal structure and biogenesis [J] 13.33
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 2.86
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 2.86
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 2.86
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 2.86
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 1.90
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 1.90
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 1.90
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 1.90
COG0166Glucose-6-phosphate isomeraseCarbohydrate transport and metabolism [G] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.14 %
UnclassifiedrootN/A22.86 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_100544953Not Available1234Open in IMG/M
3300002907|JGI25613J43889_10009404All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae2698Open in IMG/M
3300004114|Ga0062593_100135357All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1832Open in IMG/M
3300004114|Ga0062593_100845046Not Available917Open in IMG/M
3300004153|Ga0063455_101648950All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005093|Ga0062594_100294470All Organisms → cellular organisms → Bacteria1228Open in IMG/M
3300005327|Ga0070658_10067549All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae2921Open in IMG/M
3300005333|Ga0070677_10209848All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria945Open in IMG/M
3300005333|Ga0070677_10501829All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300005337|Ga0070682_101031366All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales685Open in IMG/M
3300005338|Ga0068868_100622111All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales959Open in IMG/M
3300005356|Ga0070674_100124973All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1909Open in IMG/M
3300005356|Ga0070674_101087467All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tropica705Open in IMG/M
3300005366|Ga0070659_100702439All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300005366|Ga0070659_101874162Not Available537Open in IMG/M
3300005367|Ga0070667_102274021Not Available511Open in IMG/M
3300005444|Ga0070694_100555012All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales920Open in IMG/M
3300005544|Ga0070686_100361974All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1093Open in IMG/M
3300005578|Ga0068854_100928485Not Available766Open in IMG/M
3300005616|Ga0068852_101587969Not Available677Open in IMG/M
3300005617|Ga0068859_100225863All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1960Open in IMG/M
3300005618|Ga0068864_101977672All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300005842|Ga0068858_100043376All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae4170Open in IMG/M
3300006163|Ga0070715_10039198All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1972Open in IMG/M
3300006173|Ga0070716_101660971All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300006358|Ga0068871_100215230All Organisms → cellular organisms → Bacteria1663Open in IMG/M
3300006852|Ga0075433_10055333All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3463Open in IMG/M
3300006854|Ga0075425_100111911All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3113Open in IMG/M
3300006881|Ga0068865_100787945All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales819Open in IMG/M
3300007076|Ga0075435_100449548All Organisms → cellular organisms → Bacteria1111Open in IMG/M
3300009098|Ga0105245_10505579All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1225Open in IMG/M
3300009147|Ga0114129_10612561All Organisms → cellular organisms → Bacteria1409Open in IMG/M
3300009162|Ga0075423_10047080All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales4431Open in IMG/M
3300009176|Ga0105242_10005471All Organisms → cellular organisms → Bacteria9808Open in IMG/M
3300009176|Ga0105242_10031888All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales4213Open in IMG/M
3300009176|Ga0105242_10851738All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae907Open in IMG/M
3300009177|Ga0105248_10409530All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1527Open in IMG/M
3300009177|Ga0105248_10766584All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae1089Open in IMG/M
3300009553|Ga0105249_12909019All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300010036|Ga0126305_10913397Not Available600Open in IMG/M
3300010137|Ga0126323_1095169All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300010154|Ga0127503_10557820Not Available501Open in IMG/M
3300010154|Ga0127503_10862941All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1732Open in IMG/M
3300010397|Ga0134124_10163455All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae1996Open in IMG/M
3300010399|Ga0134127_10062861All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae3118Open in IMG/M
3300011332|Ga0126317_10771386Not Available681Open in IMG/M
3300012212|Ga0150985_100179944All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2409Open in IMG/M
3300012212|Ga0150985_113168146Not Available774Open in IMG/M
3300012469|Ga0150984_106423148All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1207Open in IMG/M
3300012469|Ga0150984_109197475All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1307Open in IMG/M
3300012469|Ga0150984_117029473All Organisms → cellular organisms → Bacteria → Proteobacteria937Open in IMG/M
3300012469|Ga0150984_119395247Not Available708Open in IMG/M
3300012904|Ga0157282_10225989Not Available620Open in IMG/M
3300012910|Ga0157308_10027596All Organisms → cellular organisms → Bacteria1329Open in IMG/M
3300012955|Ga0164298_10489851All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300012957|Ga0164303_10913244All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300012958|Ga0164299_10643520All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300012960|Ga0164301_11158331Not Available618Open in IMG/M
3300012984|Ga0164309_10012317All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae4263Open in IMG/M
3300012987|Ga0164307_11294186Not Available609Open in IMG/M
3300013297|Ga0157378_11281438All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tropica774Open in IMG/M
3300013306|Ga0163162_10052106All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae4109Open in IMG/M
3300013306|Ga0163162_12651141All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300013308|Ga0157375_10820970All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae1078Open in IMG/M
3300014326|Ga0157380_11172266All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300015162|Ga0167653_1017090All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter1420Open in IMG/M
3300015371|Ga0132258_10360957All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3596Open in IMG/M
3300015372|Ga0132256_102557321Not Available611Open in IMG/M
3300015373|Ga0132257_104608136Not Available502Open in IMG/M
3300018067|Ga0184611_1224199All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300018073|Ga0184624_10229535All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300019254|Ga0184641_1252014Not Available615Open in IMG/M
3300021339|Ga0193706_1178427Not Available577Open in IMG/M
3300025893|Ga0207682_10016206All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-432904Open in IMG/M
3300025901|Ga0207688_10012011All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-434714Open in IMG/M
3300025905|Ga0207685_10063823All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1469Open in IMG/M
3300025909|Ga0207705_11060244All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria625Open in IMG/M
3300025918|Ga0207662_10213920All Organisms → cellular organisms → Bacteria → Proteobacteria1252Open in IMG/M
3300025926|Ga0207659_10665248Not Available890Open in IMG/M
3300025927|Ga0207687_10113658All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2014Open in IMG/M
3300025931|Ga0207644_10519318All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300025936|Ga0207670_10094871All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2118Open in IMG/M
3300025937|Ga0207669_10182351All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1506Open in IMG/M
3300025937|Ga0207669_10743300Not Available809Open in IMG/M
3300025938|Ga0207704_10201018All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1458Open in IMG/M
3300025938|Ga0207704_10555232All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria934Open in IMG/M
3300025960|Ga0207651_10320092All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300025981|Ga0207640_10309911All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1252Open in IMG/M
3300026023|Ga0207677_11057490All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria738Open in IMG/M
3300026035|Ga0207703_10094295All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2523Open in IMG/M
3300026088|Ga0207641_10500364All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1180Open in IMG/M
3300026095|Ga0207676_11670595All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300026121|Ga0207683_10275040All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1539Open in IMG/M
3300026142|Ga0207698_10296832All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1502Open in IMG/M
3300026320|Ga0209131_1001411All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria16634Open in IMG/M
3300027907|Ga0207428_10917483Not Available618Open in IMG/M
3300028587|Ga0247828_10928967All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300028790|Ga0307283_10101277Not Available753Open in IMG/M
3300031058|Ga0308189_10167431All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria769Open in IMG/M
3300031093|Ga0308197_10077701Not Available931Open in IMG/M
3300031094|Ga0308199_1077087All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria699Open in IMG/M
(restricted) 3300031150|Ga0255311_1014780All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1584Open in IMG/M
3300031854|Ga0310904_10572741All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300032075|Ga0310890_11193773All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300032205|Ga0307472_102338729Not Available541Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.38%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere7.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.71%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.76%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil3.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.81%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.86%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.86%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.90%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.90%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.90%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.90%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.95%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.95%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.95%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.95%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.95%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.95%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.95%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010137Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015162Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300019254Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021339Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028790Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10054495333300000364SoilVWAPPVTELEVLRRRRDLVLLSAELQRATLLRRIEHVEHHPVRLAFGLAASAATVPVLIKVGSLVARRVSRRDRHTSSTEKRRFSVLALLPLLRFIPAIKAALPRLRTINRRK*
JGI25613J43889_1000940423300002907Grasslands SoilVTELEILRRRRDLVLLSAELQRATLVRRIERVEHHPVHLALGLAASAATVPILIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFLPAIKAAFPRLRSINRRK*
Ga0062593_10013535743300004114SoilVTEMETLRRRRELVLLSAQLQRATLVRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR*
Ga0062593_10084504623300004114SoilVTELELLRRRRDLVLLSAELQRATIVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFIPAIKAALPRLRTINRRK*
Ga0063455_10164895023300004153SoilLQRRRELVLLSAELQRATLVRRLDHVQRHPVNTMVGLAASVASVPLLLKVGMLVARRAGGRKRRMNTNEKRRFSLLALLPLLRYVPAIKAVLPRLRSLNFNRH*
Ga0062594_10029447013300005093SoilRRRDLVLLSAELQRATIVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFIPAIKAALPRLRTINRRK*
Ga0070658_1006754943300005327Corn RhizosphereVTEMEILRRRRELVLLSAELQRATLVRRLDHVQRHPMNTVVGLATSIASVPLLFKVGSLVARRVAGAKRNRRMSSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR*
Ga0070677_1020984813300005333Miscanthus RhizosphereVTEMETLRRRRELVLLSAQLQRATLVRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAI
Ga0070677_1050182923300005333Miscanthus RhizosphereRCARAWERRVTEMETLRRRRELVLLSAQLQRATLVRRIENVQRHPMNTVVGLATSLASVPLLFKVGTLVARRVAGRNRKRRMTSNEKRRFSLLALLPLLRYVPAIKAALPRLRTVNFNRR
Ga0070682_10103136613300005337Corn RhizosphereLQRATLVRRLDHVQRHPMNTVVGLATSIASVPLLFKVGSLVARRVAGAKRNRRMSSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR*
Ga0068868_10062211133300005338Miscanthus RhizosphereLSAQLQRATLIRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR*
Ga0070674_10012497333300005356Miscanthus RhizosphereMAWGCRVTEFDTLSRRRELVLLSAELQRATIVRRLDHLQRHPIHTAIGIAASVATVPILFKVGSMVAGRVARKRRQLSSTDKRRFSVLALLPLLRYVPALKAALPKLKSFNRHN*
Ga0070674_10108746723300005356Miscanthus RhizosphereVTEMEVLARRRELVVLSAQLQRTTLVRRLDHVQQHPVNAAIRLVAGVASVPLLFKVGSLVAHKVSQKKRRMNKTEKRRFSVLALLPLLRYVPAIKAALPRLRSLNRSK*
Ga0070659_10070243913300005366Corn RhizosphereRATLVRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR*
Ga0070659_10187416213300005366Corn RhizosphereVTEMEILRRRRELVLLSAELQRATLVRRLDHVQRHPVNTMVGLAASVASVPLLMKVGMLVARRATGRKRRLNTNEKRRFSLLALLPLLRYVPAIKAVLPRLRSVNFNRR*
Ga0070667_10227402113300005367Switchgrass RhizosphereMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSLRDRHRSSNEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0070694_10055501213300005444Corn, Switchgrass And Miscanthus RhizosphereRRCATEWAPPVTELELLRRRRDLVLLSAELQRATIVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0070686_10036197433300005544Switchgrass RhizosphereVTELELLRRRRDLVLLSAELQRATIVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0068854_10092848513300005578Corn RhizosphereVTEMEILRRRRELVLLSAQLQRATLVRRLDHVQRHPVNTMVGLAASVASVPLLMKVGMLVARRATGRKRRLNTNEKRRFSLLALLPLLRYVPAIKAVLPRLRSVNFNRR
Ga0068852_10158796913300005616Corn RhizosphereMRCARAWEPPVTEMEILRRRRELVLLSAQLQRATLVRRLDHVQRHPVNTMVGLAASVASVPLLMKVGMLVARRATGRKRRLNTNEKRRFSLLALLPLLRYVPAIKAVLPRLRSVNFNRR*
Ga0068859_10022586343300005617Switchgrass RhizosphereMSRRFAMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRASPRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK
Ga0068864_10197767213300005618Switchgrass RhizosphereSRPCATEWAPPVTELELLRRRRDLVLLSAELQRATLVRRIEHVEHHPVRLAFGLAASAATVPVLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0068858_10004337653300005842Switchgrass RhizosphereMSRRFAMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPLLIKVGSLVARRASPRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK
Ga0070715_1003919843300006163Corn, Switchgrass And Miscanthus RhizosphereDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSLRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0070716_10166097123300006173Corn, Switchgrass And Miscanthus RhizosphereMGWVPPVTELEVLRRRRDLVLLSAELQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSPRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0068871_10021523043300006358Miscanthus RhizosphereVTELDVLRTRRELVMVSAQLQRETLVRRFDHVERHPVHYAIGIAASAASVPVLLKVGSIVARRVARRDRHMSSTEKRRFSALALLPLLRFVPAIKAALPKLRSFNRRR*
Ga0075433_1005533333300006852Populus RhizosphereVTEIEILRRRRELVLLSAELQRATLVRRLDHVQQHPIHAGVRLFAGIASVPLLFKVGSVVAHRVARKKRRMSSTEKRRFSVLALLPLLRYLPALKAALPKLRSFHRR*
Ga0075425_10011191133300006854Populus RhizosphereVTELELLRRRRALVLLSAELQRATLVRRIEHVEHHPVRLAFGLAASAATVPVLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFIPAIKAALPRLRTINRRN*
Ga0068865_10078794513300006881Miscanthus RhizosphereLQRATIVRRLDHLQRHPIHTAIGIAASVATVPILFKVGSMVAGRVARKRRQLSSTDKRRFSVLALLPLLRYVPALKAALPKLKSFNRHN*
Ga0075435_10044954823300007076Populus RhizosphereVTELELLRRRRALVLLSAELQRATLVRRIEHVEHHPVRLAFGLASSAATVPVLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFIPAIKAALPRLRTINRRK*
Ga0105245_1050557923300009098Miscanthus RhizosphereMETLRRRRELVLLSAQLQRATLVRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR*
Ga0114129_1061256133300009147Populus RhizosphereVTEVEILRRRRELVLLSAELQRATLVRRLDHVQQHPIHAGVRLFAGVAAVPILFKVGSVVVNRVARKKRRMSSTEKRRFSVLALLPLLRYLPALKAALPKLRSFHRR*
Ga0075423_1004708013300009162Populus RhizosphereTPWGPRVTEIEILRRRRELVLLSAELQRATLVRRLDHVQQHPIHAGVRLFAGIASVPLLFKVGSVVAHRVARKKRRMSSTEKRRFSVLALLPLLRYLPALKAALPKLRSFHRR*
Ga0105242_10005471113300009176Miscanthus RhizosphereVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSPRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0105242_1003188863300009176Miscanthus RhizosphereMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKFGSLVARRVSLRVRHTGSTEKGRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0105242_1085173813300009176Miscanthus RhizosphereVLLSAELQRATIVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFIPAIKAALPRLRTINRRK*
Ga0105248_1040953013300009177Switchgrass RhizosphereMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLGARRVPPRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0105248_1076658433300009177Switchgrass RhizosphereRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSLRDRHRSSNEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0105249_1290901913300009553Switchgrass RhizosphereQLQRETLVRRFDHVERHPVHYAIGIAASAASVPVLLKVGSIVARRVARRDRHMSSTEKRRFSALALLPLLRFVPAIKAALPKLRSFNRRR*
Ga0126305_1091339723300010036Serpentine SoilMQILRRRRELVVLSAELQRATLVRRLDNVQRHPMNTVVGLATSIASVPLLIKVGTVVARRVAGRNRRMTTNEKRRFSLLALLPLLRYVPAIKAVLPKLTTLNFNRR*
Ga0126323_109516913300010137SoilRATLVRRLDNVQRHPMNTVVGLGMSLASVPLLIKLGTLVASRAGGRKRRMSSNEKRRFSLLALLPLLRYVPAIKAVLPRLTTLNFNRR*
Ga0127503_1055782013300010154SoilELDVLRRRRDLVLLSAELQRATLVRRIDHIEHHPVRLALGLAASAATVPVLIKVGSLVARRVPRRDRHMSSTQKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0127503_1086294133300010154SoilVTELEVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPLRVALGWAASAATVPVLIKVGSLVARRVSRRDRPMSSNEKRRFGVLALLPLLRFLPAIKAASPRLRSINRRK*
Ga0134124_1016345513300010397Terrestrial SoilPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKFGSLVARRVSLRDRHRSSNEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0134127_1006286163300010399Terrestrial SoilMAWGCRVTEFDTLSRRRELVLLSAELQRATIVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFIPAIKAALPRLRTINRRK*
Ga0126317_1077138623300011332SoilMQILQRRRELVLLSAELQRATLVRRLDNVQRHPMNTVVGLATSIASVPLLIKVGTVVARRVAGRNRRMTTNEKRRFSLLALLPLLRYVPAIKAVLPRLKTLNFNRR*
Ga0150985_10017994443300012212Avena Fatua RhizosphereMEILGRRRELVVLSAQLQRTTLVRRLDRVQQHPVNAAIRLVAGVASVPLLFKVGSIVAGRMARRQRRMSSTEKRRFSVLALLPLLKYVPAIRAALPKLRSINRNK*
Ga0150985_11316814633300012212Avena Fatua RhizosphereGKGSGPPVTELDILARRRELVLLSAELQRATLVRRLDHVQNHPVHAALGLAASVASVPILFKVGSLVARRVATKKRRMNSTQKRRFSVLALLPLLRYVPALKAALPKLRSFNRR*
Ga0150984_10642314823300012469Avena Fatua RhizosphereMEILGRRRELVVLSAQLQRTTLVRRLDRVQQHPVNAAIRLVAGVASVPLLFKVGSIVAGRMARKKRRMSSTEKRRFSVLALLPLLKYVPAIRAALPKLRSINRNK*
Ga0150984_10919747533300012469Avena Fatua RhizosphereMETLRRRRELVLLSAELQRATLVRRLDHVQRHPVNTMVGLAASVASVPLLLKVGMMVARRAGGRRRRMNTNEKRRFSLLALLPLLRYVPAIKAVLPRLRSVNFNRR*
Ga0150984_11702947313300012469Avena Fatua RhizosphereVTELEILRRRRELVLLSAELQRATLVRRLDHVQRHPMNTVVGIATSIASVPLLLKIGMLVARRAGGRKRRMNTNEKRRFSLLALLPLLRYVPAIKAV
Ga0150984_11939524733300012469Avena Fatua RhizospherePVTELDILARRRELVLLSAELQRATLVRRLDHVQNHPVHAALGLAASVASVPILFKVGSLVARRVATKKRRMNSTQKRRFSVLALLPLLRYVPALKAALPKLRSFNRR*
Ga0157282_1022598923300012904SoilMETLRRRRELVLLSAQLQRATLVRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNF
Ga0157308_1002759623300012910SoilMETLRRRRELVLLSAQLQRATLIRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR*
Ga0164298_1048985123300012955SoilMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPLLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0164303_1091324413300012957SoilFAMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPLLIKVGSLVARRASPRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0164299_1064352023300012958SoilMEVLRRRRELVLLSAELQRATLVRRLDHVQQHPVNAALRFVAGVASVPILFKVGSLVIDRAARKRRRMSSNEKRRFSVLALLPLLRYLPAIRAALPKLRSFHRR*
Ga0164301_1115833113300012960SoilMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKFGSLVARRVSLRDRHRSSNEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0164309_1001231763300012984SoilMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPLLIKVGSLVARRVSPRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0164307_1129418613300012987SoilMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSPRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0157378_1128143823300013297Miscanthus RhizosphereVTEFDTLSRRRELVLLSAELQRATIVRRLDHLQRHPIHTAIGIAASVATVPILFKVGSMVAGRVARKRRQLSSTDKRRFSVLALLPLLRYVPALKAALPKLKSFNRHN*
Ga0163162_1005210683300013306Switchgrass RhizosphereVTELDVLRTRRELVMVSAQLQRETLVRRFDHVERHPVHYAIGIAASAASVPVLLKVGSIVARRVARRDRHVSSTEKRRFSALALLPLLRFVPAIKAALPKLRSFNRRR*
Ga0163162_1265114123300013306Switchgrass RhizosphereRRRELVLLSAKLQRATLVRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR*
Ga0157375_1082097033300013308Miscanthus RhizosphereRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRASPRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK*
Ga0157380_1117226633300014326Switchgrass RhizosphereEMETLRRRRELVLLSAQLQRATLVRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR*
Ga0167653_101709023300015162Glacier Forefield SoilVTDAQILRHRRELVLLSAELQRTTLVRRLDHVQQHPVHAVLRLAAGLASVPILFKVASIVANRVAGKTRRMSTTQKRRFSVLALLPLLRYLPALKAVFPKLRSFNRSK*
Ga0132258_1036095743300015371Arabidopsis RhizosphereMETLRRRRELVLLSAQLQRATLVRRIENVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR*
Ga0132256_10255732113300015372Arabidopsis RhizosphereLQRATLVRRIDNVQRHPVNTMVGLAGSLVSVPILIKVGMLVARRVQSRRPTRRMNTNEKRFSVLALLPLLRYVPALRAVLPKLRTLNFHRQQT*
Ga0132257_10460813613300015373Arabidopsis RhizosphereLVRRLDHVQRHPINTMVGLATSVVSVPILFKVGMLIAKRVNSSRPTRRMNTNEKRFSVLALLPLLRYVPALRAVLPKLRTLNFHRQQT*
Ga0184611_122419913300018067Groundwater SedimentRCARAWERRVTEMETLRRRRELVVLSAQLQRETLVRRIDNVQRHPMRTVVGLATSIASVPLLLKVGTLVARRVAGRKRPRRMTSNEKRRFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR
Ga0184624_1022953523300018073Groundwater SedimentVTEMETLRRRRELVLLSAQLQRATLVRRMDNVQRHPMRTVVGLATSIASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRRFSLLAWLPLLRYVPAIKAVLPRLRSVNFNRR
Ga0184641_125201413300019254Groundwater SedimentVTDMETLRRRRELVLLSAELQRTTLVRRLDHVQQHPVHAALKLAAGVATVPILFKVGSIVANRVAKKKRRMSTTQKRRFSVLALLPLLRYVPALKAALPRLRSFNRSR
Ga0193706_117842723300021339SoilMEILRRRRELVLLSAQLQRTTLVRRLDSVQQHPVNTAVRLLAGIASVPLLFKVGSIVAGRVAQKKRRMSSTEKRRFSVLALLPLLKYVPAIKAALPKLRSINRNK
Ga0207682_1001620633300025893Miscanthus RhizosphereVTEMETLRRRRELVLLSAQLQRATLVRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRRFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR
Ga0207688_1001201143300025901Corn, Switchgrass And Miscanthus RhizosphereVTEMETLRRRRELVLLSAQLQRATLVRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR
Ga0207685_1006382323300025905Corn, Switchgrass And Miscanthus RhizosphereMSRRFAMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSLRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK
Ga0207705_1106024413300025909Corn RhizosphereVTEMEILRRRRELVLLSAELQRATLVRRLDHVQRHPMNTVVGLATSIASVPLLFKVGSLVARRVAGAKRNRRMSSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR
Ga0207662_1021392023300025918Switchgrass RhizosphereMRCARAWEPPVTEMEILRRRRELVLLSAELQRATLVRRLDHVQRHPVNTMVGLAASVASVPLLMKVGMLVARRATGRKRRLNTNEKRRFSLLALLPLLRYVPAIKAVLPRLRSVNFNRR
Ga0207659_1066524823300025926Miscanthus RhizosphereVTELELLRRRRDLVLLSAELQRATIVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFIPAIKAALPRLRTINRRK
Ga0207687_1011365813300025927Miscanthus RhizosphereRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKFGSLVARRVSLRDRHRSSNEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK
Ga0207644_1051931823300025931Switchgrass RhizosphereVTEIETLRRRRELVLLSAQLQRATLVRRIENVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR
Ga0207670_1009487153300025936Switchgrass RhizosphereMSRRFAMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVPPRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK
Ga0207669_1018235133300025937Miscanthus RhizosphereMAWGCRVTEFDTLSRRRELVLLSAELQRATIVRRLDHLQRHPIHTAIGIAASVATVPILFKVGSMVAGRVARKRRQLSSTDKRRFSVLALLPLLRYVPALKAALPKLKSFNRHN
Ga0207669_1074330023300025937Miscanthus RhizosphereVTEMEVLARRRELVVLSAQLQRTTLVRRLDHVQQHPVNAAIRLVAGVASVPLLFKVGSLVAHKVSQKKRRMNKTEKRRFSVLALLPLLRYVPAIKAALPRLRSLNRSK
Ga0207704_1020101833300025938Miscanthus RhizosphereMSRRFAMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKFGSLVARRVSLRDRHRSSNEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK
Ga0207704_1055523213300025938Miscanthus RhizosphereLQRATIVRRLDHLQRHPIHTAIGIAASVATVPILFKVGSMVAGRVARKRRQLSSTDKRRFSVLALLPLLRYVPALKAALPKLKSFNRHN
Ga0207651_1032009243300025960Switchgrass RhizosphereRRCATEWAPPVTELELLRRRRDLVLLSAELQRATIVRRIEHVKHHPVHLALGLAASAATVPVLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFIPAIKAALPRLRTINRRK
Ga0207640_1030991123300025981Corn RhizosphereMRCARAWEPPVTEMEILRRRRELVLLSAELQRATLVRRLDHVQRHPVNTMVGLAASVASVPLLMKVGMLVARRATGRKRRLNTNEKRRFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR
Ga0207677_1105749023300026023Miscanthus RhizosphereMETLRRRRELVLLSAQLQRATLIRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR
Ga0207703_1009429553300026035Switchgrass RhizospherePVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPLLIKVGSLVARRASPRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK
Ga0207641_1050036433300026088Switchgrass RhizosphereMDWVPPVTELDVLRRRRDLVLLSAQLQRATLVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVPPRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRLK
Ga0207676_1167059513300026095Switchgrass RhizosphereSRPCATEWAPPVTELELLRRRRDLVLLSAELQRATIVRRIEHVEHHPVHLALGLAASAATVPVLIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFLPAIKAALPRLRSINRRK
Ga0207683_1027504043300026121Miscanthus RhizosphereVTEMEILRRRRELVLLSAELQRATLVRRLDHVQRHPVNTMVGLAASVASVPLLMKVGMLVARRATGRKRRLNTNEKRRFSLLALLPLLRYVPAIKAVLPRLRSVNFNRR
Ga0207698_1029683243300026142Corn RhizosphereMRCARAWEPPVTEMEILRRRRELVLLSAQLQRATLVRRLDHVQRHPVNTMVGLAASVASVPLLMKVGMLVARRATGRKRRLNTNEKRRFSLLALLPLLRYVPAIKAVLPRLRSVNFNRR
Ga0209131_1001411103300026320Grasslands SoilVTELEILRRRRDLVLLSAELQRATLVRRIERVEHHPVHLALGLAASAATVPILIKVGSLVARRVSRRDRHMSSTEKRRFSVLALLPLLRFLPAIKAAFPRLRSINRRK
Ga0207428_1091748323300027907Populus RhizosphereVTEIEILRRRRELVLLSAELQRATLVRRLDHVQQHPIHAGVRLFAGIASVPLLFKVGSVVAHRVARKKRRMSSTEKRRFSVLALLPLLRYLPALKAALPKLRSFHRR
Ga0247828_1092896723300028587SoilLIRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRRFSLLALLPLLRYVPAIKAALPRLRTVNFNRR
Ga0307283_1010127723300028790SoilMETLRRRRELVLLSAQLQRATLVRRMDNVQRHPMRTVLGFATSLASVPLLIKVGTLVARRVTARKRPRRMTSNEKRRFSLLALLPLLRYVPAIKAVLPRLRSVNFNRR
Ga0308189_1016743113300031058SoilVNELEVLRRRRELVLLSAELQRATLVRRLDHVQQHPVNAAVRLFAGVAAVPILFKVGSVVANRVARKKRRMSSTEKRRFSVLALLPLLRYLPALKAALPKLRSFHRR
Ga0308197_1007770133300031093SoilMETLRRRRELVLLSAQLQRATLVRRMDNVQRHPMRTVVGLATSIASVPLLLKVGTLVARRVAGRKRPRRMTSNEKRRFSLLALLPLLRYVPAIKAVLPRLRSVNFNRR
Ga0308199_107708733300031094SoilDNVQRHPMRTVVGLATSIASVPLLLKVGTLVARRVAGRKRPRRMTSNEKRRFSLLALLPLLRYVPAIKAVLPRLRSVNFNRR
(restricted) Ga0255311_101478043300031150Sandy SoilVTEAEILRRRRELVLLSAELQRATLVRRLDHVQQHPVHAALRLAAGLASVPLLFKVGSIVINRAARKKRLVSTTDKRRFSVLALLPLLRYLPALKAALPKLRSFQRR
Ga0310904_1057274123300031854SoilVTEMETLRRRRELVLLSAQLQRATLVRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR
Ga0310890_1119377323300032075SoilATLVRRLDNVQRHPMNTVVGLAASLASVPLLFKVGTLVASRVAGRNRKRRMTSNEKRGFSLLALLPLLRYVPAIKAVLPRLRTLNFNRR
Ga0307472_10233872913300032205Hardwood Forest SoilLSAGLQRATLARRIEHVERHPVHLALGFAASAATVPVLIKVGSLVARRVSRRDRHISTTDKRRFSVLALLPLLRFIPAIKAVLTRSFNRHQ


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