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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F096116 |
| Family Type | Metagenome |
| Number of Sequences | 105 |
| Average Sequence Length | 68 residues |
| Representative Sequence | MSLFEETMAGELAGLLRAGVPARGVRLTVRELIVTRIERGPLGAREVGDAVEAAMRAACRLVRELD |
| Number of Associated Samples | 98 |
| Number of Associated Scaffolds | 105 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.00 % |
| % of genes from short scaffolds (< 2000 bps) | 0.00 % |
| Associated GOLD sequencing projects | 95 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.72 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.143 % of family members) |
| Environment Ontology (ENVO) | Unclassified (31.429 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (44.762 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 58.51% β-sheet: 0.00% Coil/Unstructured: 41.49% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.72 |
| Powered by PDBe Molstar | |
| SCOP family | SCOP domain | Representative PDB | TM-score |
|---|---|---|---|
| a.4.9.1: Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | d1whua1 | 1whu | 0.71817 |
| a.100.1.6: Glycerol-3-phosphate dehydrogenase | d1txga1 | 1txg | 0.68876 |
| c.80.1.2: Phosphoglucose isomerase, PGI | d2cxna_ | 2cxn | 0.68237 |
| a.100.1.0: automated matches | d1yj8a2 | 1yj8 | 0.68162 |
| c.50.1.2: Macro domain | d1yd9a1 | 1yd9 | 0.67774 |
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| Pfam ID | Name | % Frequency in 105 Family Scaffolds |
|---|---|---|
| PF10431 | ClpB_D2-small | 97.14 |
| PF07724 | AAA_2 | 0.95 |
| PF13591 | MerR_2 | 0.95 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 17.14% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 13.33% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 10.48% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.71% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 5.71% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.76% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 4.76% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 3.81% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 3.81% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.86% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 2.86% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.90% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 1.90% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.90% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.90% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 1.90% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 1.90% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 0.95% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 0.95% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.95% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.95% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.95% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.95% |
| Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 0.95% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.95% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.95% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.95% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.95% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.95% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.95% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.95% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2035918004 | Soil microbial communities from sample at FACE Site 2 North Carolina CO2- | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001661 | Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly) | Environmental | Open in IMG/M |
| 3300002886 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm | Environmental | Open in IMG/M |
| 3300005176 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 | Environmental | Open in IMG/M |
| 3300005186 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 | Environmental | Open in IMG/M |
| 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
| 3300005446 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 | Environmental | Open in IMG/M |
| 3300005451 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 | Environmental | Open in IMG/M |
| 3300005454 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 | Environmental | Open in IMG/M |
| 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
| 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Environmental | Open in IMG/M |
| 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
| 3300005557 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 | Environmental | Open in IMG/M |
| 3300005560 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119 | Environmental | Open in IMG/M |
| 3300005566 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 | Environmental | Open in IMG/M |
| 3300005569 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 | Environmental | Open in IMG/M |
| 3300005598 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 | Environmental | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
| 3300006034 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105 | Environmental | Open in IMG/M |
| 3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
| 3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
| 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Environmental | Open in IMG/M |
| 3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
| 3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
| 3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
| 3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
| 3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
| 3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009168 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 | Environmental | Open in IMG/M |
| 3300010303 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015 | Environmental | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
| 3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
| 3300012204 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG | Environmental | Open in IMG/M |
| 3300012356 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
| 3300012685 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG | Environmental | Open in IMG/M |
| 3300012902 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1 | Environmental | Open in IMG/M |
| 3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
| 3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014861 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT27_16_10D | Environmental | Open in IMG/M |
| 3300015241 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015359 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015 | Environmental | Open in IMG/M |
| 3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
| 3300017939 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG | Environmental | Open in IMG/M |
| 3300017973 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG | Environmental | Open in IMG/M |
| 3300018056 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1 | Environmental | Open in IMG/M |
| 3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
| 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026330 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes) | Environmental | Open in IMG/M |
| 3300026331 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes) | Environmental | Open in IMG/M |
| 3300026376 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B | Environmental | Open in IMG/M |
| 3300027388 | Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027748 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes) | Environmental | Open in IMG/M |
| 3300027787 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes) | Environmental | Open in IMG/M |
| 3300027880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028807 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186 | Environmental | Open in IMG/M |
| 3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031778 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24 | Environmental | Open in IMG/M |
| 3300031794 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23 | Environmental | Open in IMG/M |
| 3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
| 3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
| 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Host-Associated | Open in IMG/M |
| 3300031946 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172 | Environmental | Open in IMG/M |
| 3300032012 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3 | Environmental | Open in IMG/M |
| 3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
| 3300032091 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25 | Environmental | Open in IMG/M |
| 3300032179 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300032829 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3 | Environmental | Open in IMG/M |
| 3300032892 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5 | Environmental | Open in IMG/M |
| 3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
| 3300034354 | Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| FACENCA_4068520 | 2035918004 | Soil | VRPFEDAMAAELAGLLRAGVPERGIHLTVRELISVRIERGPLGAREVSDAVEAMVRAACRLVRELDAPDELVENRLPGEPGGGARP |
| JGI1027J12803_1082561802 | 3300000955 | Soil | VRPFEEAVAAELAGLLRAGVPPRGISITVREMLVTRLERGQLGPREVSEAVEAAVRGAYRLVHELGA |
| JGI10216J12902_1076307652 | 3300000956 | Soil | VNAFEETMTAELTGLLRAGVPVRGVRLTVRELVVTRIERGPLDAREITEAVEAAVRA |
| JGI12053J15887_105113942 | 3300001661 | Forest Soil | MRAFEEEIVSELAWVLRAGVPERGLRLTVRELLITRIGRGPLGAREVSDAVEAAVRAACRLARELDAPDDVVETVCR |
| JGI25612J43240_10517521 | 3300002886 | Grasslands Soil | MKPFEDAVAMELMWLLRAGVPAHGVQLTVRELVVARIGRGPLGPREVSDAVEATVRAAGRLVREMDASQELVEL |
| Ga0066679_109660102 | 3300005176 | Soil | MSLFEETMAGELAGLLRAGVPARGVRLTVRELIVTHIERGPLGAREVGDAVEAALRAACRLVRELDAPPEV |
| Ga0066676_103395971 | 3300005186 | Soil | MVAELAGLLRAGVPDRGIHLTVRELISVRIERGPLGAREVSDAVEAMVRAACRLVRELDA |
| Ga0070700_1009182941 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | VRPFEEAVAAELAGLLRAGVPLRGISITVREMLVTRLERGPLGPREVSEAVEATVRGA |
| Ga0066686_102735062 | 3300005446 | Soil | VRPFEEAVASELAGLLRAGVPTRGVHITVREMVVMRIERGPLGAREVSDAVEAAVRAACRVVRELDAPDELAEIV |
| Ga0066681_108732022 | 3300005451 | Soil | MRLFEDVVASELAGLLRLGVPLHGLHLTVRELFVARIERGPLGAREVGDAVEDMVRAACRLVREMGAPE |
| Ga0066687_104178352 | 3300005454 | Soil | MSLFEETMAGELAGLLRAGVPARGVRLTVRELIVTRIERGPLGPREVGDAVAAAMRAACRLVRELDAP |
| Ga0070697_1002056992 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | MSLFEETMAGELAGLLRAGVPARGVRLTVRELIVTHIERGPIGAREVGDAVAAAMRAACRLVRELDAPPEVVE |
| Ga0070686_1001173752 | 3300005544 | Switchgrass Rhizosphere | MRPFEDVMVEELAGLVRAGVPIRGVHLTVRELFVARIERGPLGPREVSEAVEAMVRAACR |
| Ga0070704_1005756941 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | MTGFEDAMAGELAALLRAGAPAHAVRIAVRERVVARMERGPLGAREVGDTVESAVRAACRLARELQAPDELVEIVCRAALEAVRGH |
| Ga0066704_100713211 | 3300005557 | Soil | MSLFEESMAGELAGLLRAGVPARGVRLTVRELIVTRIERGPLGPREVGDAVAAAMRAACRLVREL |
| Ga0066704_108761051 | 3300005557 | Soil | MTGFEEQLASELVWILRAGVPAHGIRLTVREIVVGRIGRGPLGAREVSAAVEAAVRAACRLVREMDAPEELVDTVCRAALE |
| Ga0066670_105489702 | 3300005560 | Soil | VSAFEEAMTAELIWMARAGLPARTVRLTVHECLLTRIGRGPLGAREVSDAVEAAVRAACR |
| Ga0066693_101494872 | 3300005566 | Soil | MSLFEETMAAELAGLLRAGVPARGVRLTVRELIVTHIERGPLGAREVGDAVEAAMRAACRLVR |
| Ga0066705_104557331 | 3300005569 | Soil | VSAFEEAMTAELIWMARAGLPARTVRLTVHECLLTRIGRGPLGAREVSDAVEAAVRAACRIVRELDAPDELVEA |
| Ga0066706_114131851 | 3300005598 | Soil | VSAFEEVMAAELTWMARAGLPARTVRLTVQECLLTRIGRGPLGAREVSDAVEAA |
| Ga0070702_1011108171 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | VRPFEDVMVEELAGLVRAGVPLRGVHLTVRELFVARIERGPLGPREVSEAVEAMVRAAGRLVGERGAPEELAETVCR |
| Ga0068852_1023242841 | 3300005616 | Corn Rhizosphere | MVERLAELVRAGVPIRGVRLTVRELFVARIERGPLGPREVSEAVESMVRAACRLVQDLDAPDELVE |
| Ga0068861_1012422261 | 3300005719 | Switchgrass Rhizosphere | MTGFEDAMAGELAALLRAGAPAHAVRIAVRERVVARMERGPLGAREVGDTVESAVRAACRLARELQAPDELVEIVCRAALEAVR |
| Ga0068860_1012834582 | 3300005843 | Switchgrass Rhizosphere | VNQFEQLMAAELTGLLRAGVPVRGMRLTVRELIVTRIERGPLGGREISDAVEAAVRAACRLV |
| Ga0066656_101523582 | 3300006034 | Soil | VRPFEEAVASELAGLLRAGVPTRGVHITVREMVVMRIERGPLGAREVSDAVEAAVRAACRVVRELDAPDELAEIVCRSA |
| Ga0066652_1013928551 | 3300006046 | Soil | MSLFEETMAAELAGLLRAGVPARGVRLTVRELIVTHIERGPLGAREVGDAVEAAMRAACRLVREL |
| Ga0075417_106164261 | 3300006049 | Populus Rhizosphere | VRPFEEAMASELAGLLRAGVPARGVHITVRELVVTRMERGPLGAREVGDVIDAAVRAACRLVRELDAPEELAEI |
| Ga0070715_104081641 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MRLFEDVVAAELAGLLRLGVPLHGLHLTVRELFVARIERGPLGAREVGDAVEDMVRAA |
| Ga0079220_104680661 | 3300006806 | Agricultural Soil | VTTLEDVITAELRALLRAGVPIRGVRLTVRELVVTRIERGPLGPREVSEAVEAMVRAACRLVRDAGAPDEMVEAVC |
| Ga0075428_1016790841 | 3300006844 | Populus Rhizosphere | MRQFEEVAASELVGLLRLGVPPRGFRLTVRELLIARIERGPLGAREVGNAVEDMVRAACRLARELDAPEELVETVCRA |
| Ga0075428_1018299531 | 3300006844 | Populus Rhizosphere | VRPFEEAVAAELAGLLRAGVPPRGISITVREMLVTRLERGQLGPREVSEAVEAAVRGAYRLV |
| Ga0075421_1023165331 | 3300006845 | Populus Rhizosphere | VNAFEGVVMGQLSVLVHAGVPARGVRLTVRELMVTQLERGPLGAREVSVAMEAMARAACRLVREHGAPD |
| Ga0075433_115540792 | 3300006852 | Populus Rhizosphere | VTTFEAVVASELMGMVRAGVPAHGVRLTIREMVFARFERGPLGAREVGDTVEAVVRAACRLVRELDAPEEIVEAVCRAALE |
| Ga0075420_1008825421 | 3300006853 | Populus Rhizosphere | VNPFEQAMTAVLEDLLRAGVPARGVRLTVRELVVARIERGPLGAREITEAVEATVRAASH |
| Ga0075429_1006670971 | 3300006880 | Populus Rhizosphere | VNAFEETMTAELTGLLRAGVPVRGVRLTVRELVVTRIERGPLDAREVTEAVEAAVRAACRLVRDLDA |
| Ga0075424_1016492352 | 3300006904 | Populus Rhizosphere | VRPFEDAMAAELAGLLRAGVPERGIHLTVRELISTRIERGPLGAREVSDAVEAMVRAACRLVRELDA |
| Ga0075424_1016516162 | 3300006904 | Populus Rhizosphere | VNPFEQAMTAVLEDLLRAGVPARGVRLTVRELVVARIERGPLGAREITEAVEATVRAASHVVYELNAPDE |
| Ga0075419_105267302 | 3300006969 | Populus Rhizosphere | VNPFEQAMTAVLEDLLRAGVPARGVRLTVRELVVARIERGPLGAREITEAVEATVRAASHVVYELNAPDET |
| Ga0075435_1009133662 | 3300007076 | Populus Rhizosphere | MVAELAGLLRAGVPDRGIHLTVRELISVRIERGPLGAREVSDAVEAMVRAACRLVRELDAPDELVETVCRA |
| Ga0099791_103538701 | 3300007255 | Vadose Zone Soil | MRLFEDVVASELAGLLRLGVPLHGLHLTVRELFVARIERGPLGAREVRDAVEDMVRAACRLV |
| Ga0111539_125913891 | 3300009094 | Populus Rhizosphere | VNAFEETMTAELTGLLRAGVPVRGVRLTVRELVVTRIERGPLDAREVTEAVEAAVRAACRLVRDLDAPPEVVETV |
| Ga0105243_112849002 | 3300009148 | Miscanthus Rhizosphere | MTGFEDAMAGELAALLRAGAPARAVRIAVRERVVARMERGPLGAREVGDTVESAVRAACRLARELQAP |
| Ga0105104_103630021 | 3300009168 | Freshwater Sediment | VRPFEEAVALELAVLLRAGVPARGVHITVREMLITRMERGPLGAREVSDAVEAAVRAACRLVREL |
| Ga0134082_101421851 | 3300010303 | Grasslands Soil | MSLFEETMAGELAGLLRAGVPARGVRLTVRELIVTRIERGPLGPREVGDAVAAAMRAACR |
| Ga0134122_106903781 | 3300010400 | Terrestrial Soil | MRAFEELMAGELAGLLRAGVPARGVHLAVRELVVVRLERGPLGAREVNEAVEAAVRAACRMVRELGAPEEVVETV |
| Ga0134123_109740261 | 3300010403 | Terrestrial Soil | VRPFEDVMVEELVGLVRAGVPIRGVHLTVRELFVARIERGPLGPREVSQAVEAMVRAAGRLVQEVGAPEE |
| Ga0137399_106406141 | 3300012203 | Vadose Zone Soil | MRPFEEEIVSELAWVLRAGVPERGLRLTVRELLITRIGRGPLGAREVSDAVEAAVRAA |
| Ga0137374_104871571 | 3300012204 | Vadose Zone Soil | VTPFEQSMASELVGLLRAGVPVRAVRLTVRELVVTRIGRGPLGAREVSDAVEAAVRAACRVALELG |
| Ga0137371_107244161 | 3300012356 | Vadose Zone Soil | VNPFEDMMTAELTGLLRAGVPVRGVRLTVRELVVTRIERGPLGAHEVGEAVEAAVRAACRLVRELGAPPEIVETVCRG |
| Ga0137360_102145022 | 3300012361 | Vadose Zone Soil | MSLFEETMAGELAGLLRAGVPARGVRLTVRELIVTRIERGPLGAREVGDAVEAAMRAACRLVRELD |
| Ga0137397_100552542 | 3300012685 | Vadose Zone Soil | MSLFEETMAGELAGLLRAGVPARGVRLTVRELIVTHIERGPLGAREVGDAVEAAMRAACRLVRELDAPPEVVETVCRAALEAV |
| Ga0137397_101169802 | 3300012685 | Vadose Zone Soil | MRLFEDAVASELAGLLRLGVPLHGLHLTVRELFVARIERGPLGAREVGDAVEDMVRAACRLVREMGA |
| Ga0157291_104023722 | 3300012902 | Soil | MVERLAELVRAGVPIRGVRLTVRELFVARIERGPLGPREVSEAVESMVRAACRLVQD |
| Ga0137394_108879262 | 3300012922 | Vadose Zone Soil | MSLFEETMAGELAGLLRAGVPARGVRLTVRELIVTHIERGPLGAREVGDAVEAALRAACRLVRELDAPPEVVETVCRAAL |
| Ga0137416_121851971 | 3300012927 | Vadose Zone Soil | MRPFEEEIVSELAWVLRAGVPERGLRLTVRELLITRIGRGPLGAREVSDAVEAAVRAAC |
| Ga0164309_103079481 | 3300012984 | Soil | MTTLEDVIAAELRALLRAGVPTRGVRLTVRELVVTRIERGPLGPREVSEAVAAMVRAACRLVRDAGATDEMVEA |
| Ga0163162_133317802 | 3300013306 | Switchgrass Rhizosphere | MVEELAGLVRAGVPLRGVHLTVRELFVARIERGPLGPREVSQTVEAMVRAACRLVQEVGAPEEL |
| Ga0157375_114951711 | 3300013308 | Miscanthus Rhizosphere | MTGFEDAMAGELAALLRAGAPAHAVRIAVRERVVARMERGPLGAREVGDAVESAVRAACRLARELQA |
| Ga0157380_110491902 | 3300014326 | Switchgrass Rhizosphere | MRPFEDVMVEELAGLVRAGVPLRGVHLTVRELFVARIERGPLGPREVSQTVEAMVRAACRLVQEVGAPEELVE |
| Ga0180061_10932281 | 3300014861 | Soil | MRPFEEAVASELTWLLHAGVPAHGVRITVRELLVARFERGPLGAREVSEVVEASVRAACRLSRDLETPDELIETV |
| Ga0137418_104566072 | 3300015241 | Vadose Zone Soil | MAFELTQLVRAGAPTRAFRITVRELLIARIERGPLGAREVSDAVEAAMRAAC |
| Ga0134085_102960451 | 3300015359 | Grasslands Soil | VRPFEEAVASELAGLLRAGVPTRGVHITVREMVVMRIERGPLGAREVSDAVEAAVRAACRVVRE |
| Ga0182038_110083552 | 3300016445 | Soil | MRPFEDAVASELAELLRAGVPTRGIHITVREMVVTRMERGRLGAREVSDATEEAVRAACR |
| Ga0187775_104663331 | 3300017939 | Tropical Peatland | MTPFEQAVALELTALLRAGVPVRAVRLTVRELLVGRIERGPLGAREVSDAVEAAVRAACH |
| Ga0187780_114633211 | 3300017973 | Tropical Peatland | MAFEDVVVRELTTLVRAGVPARAVRLTVRELFVARIARGPLGPHEVGEAVEAMVRAASRLAREQGASEA |
| Ga0184623_103714502 | 3300018056 | Groundwater Sediment | VTPFEQVMVAELAGLLRAGVPIRAVRLTVRELLVTRIGRGPLRAREVSDAVEGAVRAACRIAVELNGP |
| Ga0066667_119294551 | 3300018433 | Grasslands Soil | VRPFEEAVAAELAGLLRAGVPPRGISITVREMLVTRLERGQLGPREVSEAVEAAVRGAYRLVHELGASDELAEIV |
| Ga0207653_102544162 | 3300025885 | Corn, Switchgrass And Miscanthus Rhizosphere | MRPFEDVMVEELAGLVRAGVPIRGVHLTVRELFVARIERGPLGPREVSEAVEAMVRAACLLVR |
| Ga0207704_104488801 | 3300025938 | Miscanthus Rhizosphere | VRPFEEAVAAELAALLRAGVPPRGISITVREMLVTRLERGPLGPREVSEAVEATVRGADR |
| Ga0207677_101049572 | 3300026023 | Miscanthus Rhizosphere | MVERLAELVRAGVPIRGVRLTVRELFVARIERGPLGPREVSEAVESMVRAACR |
| Ga0207677_119376162 | 3300026023 | Miscanthus Rhizosphere | VRPFEEAVAAELAGLLRAGVPLRGISITVREMLVTRLERGPLGPREVSEAVEATVRGAYR |
| Ga0207641_104752151 | 3300026088 | Switchgrass Rhizosphere | MVEELAGLVRAGVPIRGVRLTVRELFVARIERGPLGPREVSQAVEAMVRAAGRL |
| Ga0207648_109188281 | 3300026089 | Miscanthus Rhizosphere | MTGFEDAMAGELAALLRAGAPAHAVRIAVRERVVARMERGPLGAREVGDTVESAVRAACRLARELQAPD |
| Ga0207676_105754182 | 3300026095 | Switchgrass Rhizosphere | VRPFEDVMVEELAGLVRAGVPIRGVHLTVRELFVARIERGPLGPREVSEAVEAMVRAACRLVREVGAPEE |
| Ga0209473_10234471 | 3300026330 | Soil | MSLFEETMAGELAGLLRAGVPARGVRLTVRELIVTRIERGPLGPREVGDAVAAAMRAACRLVRELEAPPEVVETVC |
| Ga0209267_10360112 | 3300026331 | Soil | MSLFEESMAGELAGLLRAGVPARGVRLTVRELIVTRIERGPLGPREVGDAVAAAMRAACRLVRELDAPP |
| Ga0257167_10046952 | 3300026376 | Soil | MRPFEEEIVSELAWVLRAGVPERGLRLTVRELLITRIGRGPLGAREVSDAVEAAVRAACRLARELDAPDDVVETVCRAA |
| Ga0208995_10962802 | 3300027388 | Forest Soil | MTTPFEDVVAAQLLDLLRAGAPARAVRLTVRELVVTRIERGPLGAREVSDAMEAVMRAACHLVRTLGAPEELVET |
| Ga0209689_10334051 | 3300027748 | Soil | MSLFEETMAGELAGLLRAGVPARGVRLTVRELIVTRIERGPLGPREVGDAVAAAMRAACRLVRE |
| Ga0209074_100066151 | 3300027787 | Agricultural Soil | MVERLAELVRAGVPIRGVRLTVRELFVARIERGPLGPREVSEAVESMVRAACRLVQDLDAPDELVETV |
| Ga0209481_103693331 | 3300027880 | Populus Rhizosphere | VNPFEQAMTAVLEDLLRAGVPARGVRLTVRELVVARIERGPLGAREITEAVEATVRAASHVVYELNA |
| Ga0209488_104229261 | 3300027903 | Vadose Zone Soil | MRLFEDAVASELAGLLRLGVPLHGLHLTVRELFVARIERGPLGAREVGDAVEDMVRAACRLVREMGAPDELVE |
| Ga0209382_112819911 | 3300027909 | Populus Rhizosphere | VNAFEGVVMGQLSVLVHAGVPARGVRLTVRELMVTQLERGPLGAREVSVAMEAMARAACRLVREQG |
| Ga0268265_107559701 | 3300028380 | Switchgrass Rhizosphere | MRAFEELMAGELAGLLRAGVPVRGVHLAVRELVVVRLERGPLGAREVNEAVEAAVRAACRMVRELGAPEEVVETVCRAA |
| Ga0268264_101726662 | 3300028381 | Switchgrass Rhizosphere | MVEELAGLVRAGVPIRGVHLTVRELFVARIERGPLGPREVSEAVEAMVRAACRLVRELGAPEELVETVCRATLEA |
| Ga0307305_101748002 | 3300028807 | Soil | MMSELTWVLRAGVPERGLRLTVRELLITRIGRGPLGAREVSDAVEAAVRAACRLAR |
| Ga0310887_104816001 | 3300031547 | Soil | MTGFEDAMAGELAALLRAGAPAHAVRIAVRERVVARMERGPLGAREVGDTVESAVRAACRLARELQAPDELVEI |
| Ga0307469_120027572 | 3300031720 | Hardwood Forest Soil | MMTAELSGLLRAGVPVRGVRLTVRELVVARIERGPLGAHEVSEAVEAAVRAACRLVRE |
| Ga0318498_101432541 | 3300031778 | Soil | MRPFEDAVASELAELLRAGVPTRGIHITVREMVVTRMERGRLGAREVSDATEEAVRAACRLVRE |
| Ga0318503_102520032 | 3300031794 | Soil | MRPFEDAVASELAELLRAGVPTRGIHITVREMVVTRMERGRLGAREVSDATEEAVRAACRLVRELGAP |
| Ga0307473_101505361 | 3300031820 | Hardwood Forest Soil | MAAELAGLLRAGVPGRGIHLTVRELVSARIERGPLGAREVSDAVEAMVRAACRLVRELDA |
| Ga0310892_101866162 | 3300031858 | Soil | MTGFEDAMAGELAALLRAGAPAHAVRIAVRERVVARMERGPLGAREVGDTVESAVRAACRLARELQAPDELVEIVC |
| Ga0307412_114948561 | 3300031911 | Rhizosphere | VNQFEQLMAAELSGLLRAGVPVRGMRLTVRELIVTRIERGPLGGREISDAVEAAVRAACRLVR |
| Ga0310910_107560731 | 3300031946 | Soil | MRPFEDAVASELAELLRAGVPTRGIHITVREMVVTRMERGRLGAREVSDATEEAVRAACRLVRELGAPDELVEIVC |
| Ga0310902_101083372 | 3300032012 | Soil | MTGFEDAMAGELAALLRAGAPAHAVRIAVRERVVARMERGPLGAREVGDTVESAVRAACRLARELQAPDELVEIVCRAALE |
| Ga0310890_107026871 | 3300032075 | Soil | MTGFEDAMAGELAALLRAGAPAHAVRIAVRERVVARMERGPLGAREVGDAVESAVRAACRLARELQAPDEL |
| Ga0318577_104556981 | 3300032091 | Soil | MRPFEDAVASELAELLRAGVPTRGIHITVREMVVTRMERGRLGAREVSDATEEAVRAACRLVRELGAPDELVEI |
| Ga0310889_107055892 | 3300032179 | Soil | MVERLAELVRAGVPIRGVRLTVRELFVARIERGPLGPREVSEAVESMVRAACRLVQDLDAPDEL |
| Ga0307471_1012391201 | 3300032180 | Hardwood Forest Soil | MAAELAGLLRAGVPGRGIHLTVRELISARIERGPLGAREVSDAVEAMVRAACRLVRELDAPDELVETVC |
| Ga0307471_1038933562 | 3300032180 | Hardwood Forest Soil | VRPFEEAMASELAMLLSAGVPARAVRLTVREMVVARLERGPLGAQEVGDAVEAAVRAACRLVQELGAPDETVETVC |
| Ga0335070_120586692 | 3300032829 | Soil | MTPFEQVMASELTALLRAGVPVRAVRLTVRELLVTRIERGPLDAQQVSDAVEAAVRVACHLARDVEAPDQLVE |
| Ga0335081_111921142 | 3300032892 | Soil | LMRGFEDTIASELAWLLRAGAPSRAVRLTVRELVVARIERGPLDAREVSDAVEATVRAA |
| Ga0335081_113461441 | 3300032892 | Soil | MTPFEQAVASELEGLLRAGVPVRAVRLTVRELLVGRIEQGPLGAREVSDAVEAAVRAACHLVQEL |
| Ga0326726_105174061 | 3300033433 | Peat Soil | MRPFEEAVASELVGLLRAGVRVRAVRLTVRELLVGRIERGPLGAREVCDAVEATVRAACHLA |
| Ga0364943_0387111_332_538 | 3300034354 | Sediment | MRPFEELMAGELAGLLRAGVPVRGVHLTVRELVVLRLGRGPLGAREVSEAVEAAVRAACRMVREMGAPE |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |