Metagenome Family F096096

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096096
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	120 residues
Representative Sequence	MKKLLTALSITAVSAVSSVAIAQQAPDAPEADTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHD
Number of Associated Samples	88
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.27 %
% of genes near scaffold ends (potentially truncated)	93.33 %
% of genes from short scaffolds (< 2000 bps)	89.52 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.190 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.857 % of family members)
Environment Ontology (ENVO)	Unclassified (27.619 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.810 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 4.11% β-sheet: 21.92% Coil/Unstructured: 73.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF11949	DUF3466	13.33
PF08557	Lipid_DES	10.48
PF02518	HATPase_c	9.52
PF00072	Response_reg	1.90
PF04116	FA_hydroxylase	1.90
PF13557	Phenol_MetA_deg	1.90
PF00535	Glycos_transf_2	0.95
PF00486	Trans_reg_C	0.95
PF00005	ABC_tran	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	1.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.19 %
Unclassified	root	N/A	3.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.19 %
Unclassified	root	N/A	3.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.19 %
Unclassified	root	N/A	3.81 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	76.19 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	8.57 %
Unclassified	root	N/A	3.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	76.19 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.57 %
Unclassified	root	N/A	3.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	9.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.57 %
Unclassified	root	N/A	3.81 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.95 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.57 %
Unclassified	root	N/A	3.81 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.57 %
Unclassified	root	N/A	3.81 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.90 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.95 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.57 %
Unclassified	root	N/A	3.81 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.90 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.95 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.57 %
Unclassified	root	N/A	3.81 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.90 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS401B8HGC	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
2189573004\|GZGWRS402IQ8X0	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
2209111022\|2221201809	Not Available	1232	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1886339	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	671	Open in IMG/M
3300000550\|F24TB_11792985	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	590	Open in IMG/M
3300000956\|JGI10216J12902_101360583	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	977	Open in IMG/M
3300001991\|JGI24743J22301_10018875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1306	Open in IMG/M
3300002914\|JGI25617J43924_10232680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	618	Open in IMG/M
3300004114\|Ga0062593_103130605	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	530	Open in IMG/M
3300004479\|Ga0062595_101431462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	632	Open in IMG/M
3300004479\|Ga0062595_101742551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	589	Open in IMG/M
3300004479\|Ga0062595_102294217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	532	Open in IMG/M
3300004480\|Ga0062592_101829011	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	595	Open in IMG/M
3300005289\|Ga0065704_10320866	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	850	Open in IMG/M
3300005293\|Ga0065715_10757525	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	627	Open in IMG/M
3300005329\|Ga0070683_101014956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	797	Open in IMG/M
3300005332\|Ga0066388_106428977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	593	Open in IMG/M
3300005336\|Ga0070680_100108582	All Organisms → cellular organisms → Bacteria	2308	Open in IMG/M
3300005339\|Ga0070660_101169970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	652	Open in IMG/M
3300005343\|Ga0070687_100978639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	612	Open in IMG/M
3300005365\|Ga0070688_100752381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	759	Open in IMG/M
3300005437\|Ga0070710_10750470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	693	Open in IMG/M
3300005455\|Ga0070663_100347048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1201	Open in IMG/M
3300005457\|Ga0070662_101695628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	546	Open in IMG/M
3300005458\|Ga0070681_10009528	All Organisms → cellular organisms → Bacteria → Proteobacteria	9555	Open in IMG/M
3300005458\|Ga0070681_10311783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1483	Open in IMG/M
3300005458\|Ga0070681_11724763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	553	Open in IMG/M
3300005459\|Ga0068867_101711181	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	590	Open in IMG/M
3300005549\|Ga0070704_101674594	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	587	Open in IMG/M
3300005558\|Ga0066698_10860609	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	583	Open in IMG/M
3300005614\|Ga0068856_100039699	All Organisms → cellular organisms → Bacteria	4621	Open in IMG/M
3300005618\|Ga0068864_100578795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1088	Open in IMG/M
3300005618\|Ga0068864_100969662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	842	Open in IMG/M
3300005764\|Ga0066903_103498081	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	846	Open in IMG/M
3300006163\|Ga0070715_10747245	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	589	Open in IMG/M
3300006175\|Ga0070712_100390455	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300006175\|Ga0070712_100908496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	759	Open in IMG/M
3300006852\|Ga0075433_10368733	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1268	Open in IMG/M
3300006904\|Ga0075424_101559555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	700	Open in IMG/M
3300009162\|Ga0075423_12766469	Not Available	537	Open in IMG/M
3300009168\|Ga0105104_10428428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	738	Open in IMG/M
3300010038\|Ga0126315_10982600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	565	Open in IMG/M
3300010362\|Ga0126377_13435228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300010376\|Ga0126381_101572113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	950	Open in IMG/M
3300010398\|Ga0126383_11837053	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	694	Open in IMG/M
3300012901\|Ga0157288_10240362	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	602	Open in IMG/M
3300012908\|Ga0157286_10247666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	626	Open in IMG/M
3300012913\|Ga0157298_10370404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	534	Open in IMG/M
3300012951\|Ga0164300_10133870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1139	Open in IMG/M
3300012955\|Ga0164298_10014075	All Organisms → cellular organisms → Bacteria	3225	Open in IMG/M
3300012955\|Ga0164298_10116807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1442	Open in IMG/M
3300012955\|Ga0164298_11321989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	553	Open in IMG/M
3300012960\|Ga0164301_10150496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1423	Open in IMG/M
3300012960\|Ga0164301_11316323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	586	Open in IMG/M
3300012960\|Ga0164301_11697592	Not Available	527	Open in IMG/M
3300012984\|Ga0164309_10661600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	824	Open in IMG/M
3300012985\|Ga0164308_11286062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	664	Open in IMG/M
3300012987\|Ga0164307_10431383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	979	Open in IMG/M
3300013306\|Ga0163162_11334690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	815	Open in IMG/M
3300014969\|Ga0157376_10136005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2199	Open in IMG/M
3300015077\|Ga0173483_10070069	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300015200\|Ga0173480_10013542	All Organisms → cellular organisms → Bacteria	3314	Open in IMG/M
3300015200\|Ga0173480_10795810	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	603	Open in IMG/M
3300015201\|Ga0173478_10728577	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	534	Open in IMG/M
3300015372\|Ga0132256_100489504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1340	Open in IMG/M
3300015372\|Ga0132256_102935151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	573	Open in IMG/M
3300015374\|Ga0132255_101329982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1084	Open in IMG/M
3300015374\|Ga0132255_101767354	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	939	Open in IMG/M
3300015374\|Ga0132255_104026337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300018028\|Ga0184608_10018757	All Organisms → cellular organisms → Bacteria → Proteobacteria	2482	Open in IMG/M
3300018054\|Ga0184621_10087939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1087	Open in IMG/M
3300018431\|Ga0066655_10085871	All Organisms → cellular organisms → Bacteria	1727	Open in IMG/M
3300019356\|Ga0173481_10720544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300019362\|Ga0173479_10017409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1987	Open in IMG/M
3300019867\|Ga0193704_1016017	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300019996\|Ga0193693_1040113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	785	Open in IMG/M
3300020002\|Ga0193730_1041732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1329	Open in IMG/M
3300020199\|Ga0179592_10330263	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	674	Open in IMG/M
3300021344\|Ga0193719_10024563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2582	Open in IMG/M
3300023077\|Ga0247802_1018418	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	969	Open in IMG/M
3300025898\|Ga0207692_10479705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	786	Open in IMG/M
3300025901\|Ga0207688_10903081	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	559	Open in IMG/M
3300025903\|Ga0207680_10133977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1635	Open in IMG/M
3300025909\|Ga0207705_10092854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2212	Open in IMG/M
3300025915\|Ga0207693_10628141	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	835	Open in IMG/M
3300025916\|Ga0207663_10565340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	890	Open in IMG/M
3300025931\|Ga0207644_10080276	All Organisms → cellular organisms → Bacteria	2409	Open in IMG/M
3300025941\|Ga0207711_10379181	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1312	Open in IMG/M
3300025944\|Ga0207661_10903316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	813	Open in IMG/M
3300025972\|Ga0207668_11810142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300026067\|Ga0207678_11444316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	608	Open in IMG/M
3300026095\|Ga0207676_11604662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	648	Open in IMG/M
3300026550\|Ga0209474_10576537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300026836\|Ga0207612_1006324	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	522	Open in IMG/M
3300027018\|Ga0208475_1031411	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	524	Open in IMG/M
3300027907\|Ga0207428_10691732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	730	Open in IMG/M
3300028790\|Ga0307283_10020715	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1383	Open in IMG/M
3300028889\|Ga0247827_11156707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	534	Open in IMG/M
3300031231\|Ga0170824_105225114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1252	Open in IMG/M
3300031231\|Ga0170824_119706628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300031231\|Ga0170824_124918669	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	738	Open in IMG/M
3300031446\|Ga0170820_17852339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300031847\|Ga0310907_10711958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	556	Open in IMG/M
3300031858\|Ga0310892_10210846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1175	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.38%
Host-Associated	Host-Associated	27.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.52%
Plants	Host-Associated → Plants	27.62%
Aquatic	Environmental → Aquatic	2.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.38%
Sediment	Environmental → Aquatic → Sediment	1.90%
Freshwater	Environmental → Aquatic → Freshwater	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.48%
Loam	Environmental → Terrestrial → Soil → Loam	19.05%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.86%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.95%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026836	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A2-10 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_01828330	2189573004	Grass Soil	LIAINKNQQPKTSIDQMHMKRLLTTISIGGLLALSSVAIAQQAPEVIAQQAPEAADSSNRLEARLQPVIPVDASGQARLDNEVGTGNDRFTAEVEIAKADFAELGITPGNGFRDEVVELRVLRGGVLISSNRL
FG2_09769680	2189573004	Grass Soil	LIAINKNQQPKTSIDQMHMKRLLTTISIGGLLALSSVAIAQQAPEAIAQQAPEAADSSNRLEARLQPVIPVDASGQARLDNEVGTGNDRFTAEVEIAKADFAELGITPGNGFRDEVVELRVLRGGVLIFSNRL
2222029716	2209111022	Grass Soil	MKKLLTTISLGGLLALSSVAIAQQAPDIAQQAPEAADSSNRLEARLQPVIPVDASGQARLDNEVGTGNDRFTAEVEIAKADFAELGITPGNGFRDEVVELRVLRGGVLIFSNRLHFPGIL
ICChiseqgaiiDRAFT_18863391	3300000033	Soil	MQKLLTTALIGAVSVLSSLAIAQETPDSSTRLEARLQPVIPVDASGQARLDNEPGMANDRFTAEVEIAKXXFXALGITPGNGFRDEVVVLQVSRGGVVIFSQRLQFSRNL
F24TB_117929851	3300000550	Soil	MHMKKLLTIISIGGLLALSSVAIAQQVPEVPAQQAPEAPDSSIRLEARLQPVIAVDASGQARLDNDVGTGNDRFTAEVEIAKADFAELGITPGNGFRDEVVELRVLRGGVLIFSNRLQFS
JGI10216J12902_1013605831	3300000956	Soil	MLAGAISALSSLAIAQQAPEALDHSNRIEARLQPVIAVDASGQARLDDDPGITNDRFTAEIEIARADFADLGITPGNGFRDEVVELRVLRGGVTIFSNRLQFSRSLV
JGI24743J22301_100188751	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MNKRYFNQHMKKLLTAMSIVAVSAVSSLAIAQQAPDAXEADNSPSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITFET
JGI25617J43924_102326801	3300002914	Grasslands Soil	MNKRHLNQQMKKLLTGISIGGFLAVSSIALAQQAPDIAQQAREAADSSNRLEARLQPVIPVDASGQARLDDEVGTGNDRFTSEVEIAKVDFADLGITPGNGFRDEVVELRVLRGGVLIFS
Ga0062593_1031306051	3300004114	Soil	MSIAAFSALSSLAIAQQAPDAAEADTSLRLEARLQPVIPVDASGQARLDAEIGMANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRILRGGVQIFSNRLQFSRNLVNDITFETDI
Ga0062595_1014314621	3300004479	Soil	MKKHLTTILVAAISAVSSLAIAQEAPDEIDVSTRLEARLQPVISVDASGQARLDNAAGMANDRFTAEVEIAKDDFGALGITRGNGFRDEVVQLRVLRGGVQVFSNR
Ga0062595_1017425511	3300004479	Soil	MSIVAVSAVSSLAIAQQAPDAAEADNSPSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHD
Ga0062595_1022942171	3300004479	Soil	MSIAAVSAVSSLAIAQQAPDAAEADTSLRLEARLQPVIAVDASGQARLDIEAGMANDRFTAEIEIAKADFSDLGITRGNGFRDEVVELRVLRGGVLIFSNRLQFSRNLVNDI
Ga0062592_1018290111	3300004480	Soil	MSIVAVSAVSSLAIAQQAPDATEADNSPSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDIT
Ga0066809_102209991	3300005168	Soil	MSIAAFSALSSLAIAQQAQDAGTDASEIAQQALDAPEADTSLRLEARLQPVIAVDASGQARLDIEAGMANDRFTAEIEIAKADFGDLGITRGNGFRDEVV
Ga0065704_103208662	3300005289	Switchgrass Rhizosphere	MKKLLTTISIGGLLALSSVAIAQQAPEAVDSSNRLEARLQPVIPVDASGQARLDNEPGMANDRFTAEVEIAKADFAELGITPGNGFRDEVVELRVLRGGVLIFSNRL
Ga0065715_107575252	3300005293	Miscanthus Rhizosphere	MKKLLIALSVAAVSAVSSVAIAQQAPESAEADMSLRLEARLQPVIPVDASGQARLDVEAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITFET
Ga0070683_1010149562	3300005329	Corn Rhizosphere	MKKLLTTMSIAAVSAVSCVAIAQQAPDAAEVDTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFA
Ga0066388_1064289771	3300005332	Tropical Forest Soil	MSIAAFSAVSSLALAQQAPEAEAADSLRLEARLQPVIAVDASGQARLDIEAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVELRVLRGGVQIFSNRLQFSRNLVNDITF
Ga0070680_1001085821	3300005336	Corn Rhizosphere	MNKRYFNQHMKKLLTAMSIVAVSAVSSLAIAQQAPDATEADNSPSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHD
Ga0070660_1011699701	3300005339	Corn Rhizosphere	MSIVAVSAVSSLAIAQQAPDATEADNSPSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRHQFSRNLVHDITFETDLRGTPAPE
Ga0070687_1009786391	3300005343	Switchgrass Rhizosphere	MSIVAVSAVSSLAIAQQAPDAAEADNSPSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDIT
Ga0070688_1007523812	3300005365	Switchgrass Rhizosphere	MKKLLTTMSIAAVSAVSCVAIAQQAPDAAEVDTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQ
Ga0070710_107504702	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSIAAVSAVSSLAIAQQAPDAAEADTSLRLEARLQPIIAVDASGQARLDIEAGTANDRFTAEVEIAKADFDDLGITRGNGFRDEVVQLRVLRGGAQIFSNRLQFSRNLLHDITFETDIHGTP
Ga0070663_1003470481	3300005455	Corn Rhizosphere	MKKLLTALSITAVSAVSSVAIAQQAPDAPEADTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDIT
Ga0070662_1016956281	3300005457	Corn Rhizosphere	MSIVAVSAVSSLAIAQQAPDAAEADNSPSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITF
Ga0070681_100095281	3300005458	Corn Rhizosphere	MNKRYFNQHMKKLLTAMSIVAVSAVSSLAIAQQAPDAAEADNSPSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLR
Ga0070681_103117832	3300005458	Corn Rhizosphere	MKKLLAAMSITAVSAVFSVAIAQQAPDAPEADTSLRLEARLQPVIAVDASGQARLDIEAGMANDRFTAEIEIAKADFGDLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRN
Ga0070681_117247631	3300005458	Corn Rhizosphere	MKKLLTALSITAVSAVSSVAIAQQAPDAPEADTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITFETDI
Ga0068867_1017111811	3300005459	Miscanthus Rhizosphere	MSITAVSAVFSVAIAQQAPDAPEADTSLRLEARLQPVIAVDASGQARLDIEAGMANDRFTAEIEIAKADFGDLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRN
Ga0070704_1016745942	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTTISIASVLALSSVAIAQQAPEASSVAIAQEAPEPADSSNRLEARLDPVIAVDASGQARLDFGPGTANDRFTAEVEIAKDDFGPLGITPGNGFRDEVVELRVLRG
Ga0066698_108606091	3300005558	Soil	MHMKKLLTTISIGGLLALSSVAIAHQASEAADSSIRLEALLQPVIAVDASGQARLDNEVGTADDRFTAEVEIAKADFAELGITPGNGFRDEVVELRVLRGGVLIFSNRLQFSRNLVNDI
Ga0068856_1000396995	3300005614	Corn Rhizosphere	MKKLLTAMSIVAVSAVSSLAIAQQAPDAAEADNSPSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITF
Ga0068864_1005787952	3300005618	Switchgrass Rhizosphere	MKKLLTAMSIVAVSAVSSLAIAQQAPDAAEADNSPSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLR
Ga0068864_1009696621	3300005618	Switchgrass Rhizosphere	MKKLLTALSITAVSAVSSVAIAQQAPDAPEADTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITFETDIRGTPAPE
Ga0066903_1034980812	3300005764	Tropical Forest Soil	MKKLLTTISIGGLLALSSVAIAQQAPDIAQQAPEAADSSTRLEARLQPVIAVDASGQARLDNEVGTANDRFTDEVEIAKADFAELGITPGNGFRDEVVELRVLRGGVLIFSNRLQFSRNLVND
Ga0070715_107472451	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MDAITCTANLIAINKNQQAKTLIQQMPMKELLTTISIGGLLAFAPVAIAQEAPEADSSTRLEARLQPVIAVDASGQARLDSEVGTANDRFTAEVEIAKADFAELGITRGNGFRDEVVELRVLRGGVLIFSNRLHFS
Ga0070712_1003904551	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSIAAVSAVSSLAIAQQAPDAAEADTSLRLEARLQPVIAVDASGQARLDIEAGTANDRFTAEVEIAKADFDDLGITRGNGFRDEVVQLRVLRGGAQIFSNRLQFSRN
Ga0070712_1009084961	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKRHLTTLLIGSISALSSLAIAQETPEALDSGVRLETRLEPVIAVDASGQARLDNEAGTANDRFTSEVEIAKADFPDLGITPGNGFRDEVVELRVLRGGVMIFSNRL
Ga0075433_103687332	3300006852	Populus Rhizosphere	MKKLLTTISIGGLLALSSVAIAQEAPEPADSSNRLEARLDPVIAVDASGQARLDFGPGTANDRFTAEVEIAKDDFGPLGITPGNGFRDEVVELRVLRGGVLVFSNRLQFSLNLPNDITFETDI
Ga0075424_1015595552	3300006904	Populus Rhizosphere	MNKGYLNQNMKKLLTTMSLAAFSALASLAVAQQGPDAQADPSAFAQQAPEAEANSSLRLEARLQPVIPVDASGQARLDAEVGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVELRVLRGG
Ga0075423_127664692	3300009162	Populus Rhizosphere	MKTHLNQRMKKLLTAMSIAAFSTLASLATAQQAPEPEADASMILQQAPDAADASIRLEARLQPVIAVDASGQARLDSEVGTANDRFTSEVEIAKADFADLGITRGNGFRDEVVELRILRSGVLIFSHRLQFSR
Ga0105104_104284282	3300009168	Freshwater Sediment	LIAINKNQQPKTSIEQIHMKKLLTTISIGGLLALSSVAIAQEAPEAADSSNRLEARLNPIIAVDASGQARLDFGPGTANDRFTAEVEIAKDDFGPLGVTPGNGFRDEVVELRVLRGGVLVFSNRLQFSLNLPNDITF
Ga0126315_109826001	3300010038	Serpentine Soil	MNNRHFNEHIKKLLTTMSIAAVSAVCSVAIAQQAPDAIESDTSLRLEARLQPVIAVDASGQARLDIEAGTANDRFTAEVEIAKEDFADLGITRGNGFRDEVVELRVLRGGVLIFSNRLQFSRNLVNDITFE
Ga0126377_134352281	3300010362	Tropical Forest Soil	MKKILTTASIGGLLALSSVVIAQQAPDIAQQSADIAQQQPDAPDSGIRLEARLQPVIPVDASGQARLDNEVGTANDRFTSEVEIAKADFADLGITPGNGFRDEVVQLRVLRGG
Ga0126381_1015721131	3300010376	Tropical Forest Soil	LIAINKNQQPKTSIEQMHMKKLLTTISIGGLLALSSIVIAQQAPDIAQQAPEAADSSIRLEARLQPVIAVDASGQARLDNEVGTANDRFTDEVEIAKADFADLGITPGNGFRDEVVELR
Ga0126383_118370531	3300010398	Tropical Forest Soil	MNKKYLNKQMKKLLTAMLVAAFSAMTSLAIAQPAPETAEVETSAMQQAPESEANTSLRLEARLQPVIAVDASGQARLDAEVGTANDRFTAEIEIAKVDFADLGITRGNGFRDEVVQLQVL
Ga0157288_102403621	3300012901	Soil	MNKKHFNQHMKKLLTTMSIAAVSAVSCVAIAQQAPDAAEVDTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFGDLGITRGNGFRDEVVELRVLRGGVQIFSHRL
Ga0157286_102476661	3300012908	Soil	MNKRHFNEHTKNLLTALIAAVSAVSSLAVAQQAPDAVEADTSLRLEARLQPVIAVDASGQARLDVEAGMANDRFTAEVEIAKADFGDLGITRGNGLRDEVVELRVLRGGVQIFSNRLQFS
Ga0157298_103704041	3300012913	Soil	MNKKHFNQHMKKLLTTMSIAAVSAVSCVAIAQQAPDAAEVDTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFANLGITRGNGFRDEVVQLRVLR
Ga0164300_101338701	3300012951	Soil	MNKRYLNQHMKKLLTAMSIAAVSAVSSLAIAQQAPDAPEADTSLRLEARLQPVIAVDASGQARLDVEAGMANDRFTAEVEIAKADFGDLGITRGNGFRDEVVELRVLRGGMQIFSHRLQFSRNLINDITF
Ga0164298_100140751	3300012955	Soil	MNKKHFNQHMKKLLTTMSIAAVSAVSCVAIAQQAPDAAEVDTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRV
Ga0164298_101168072	3300012955	Soil	MNKRYLNQHMKKLLTAMSIAAVSAVSSLAIAQQAPDAPEADTSLRLEARLQPVIAVDASGQARLDVEAGMANDRFTAEVEIAKADFGDLGITRGNGFRDEVVELRVLRGGVQIFSHRLQFSRNLIN
Ga0164298_113219891	3300012955	Soil	MLIGAISALSSLAIAQQVPDAFDAPSTRLEARLQPVIAVDASGQARLDNAAGMVNDRFTAEVEIAKDDFGALGITRGNGFRDEVVQLRVLRGEGLAISANPGVAVNRHVPFPTFEP
Ga0164301_101504962	3300012960	Soil	MNKKHFNQHMKKLLTTMSIAAVSAVSCVAIAQQAPDAAEVDTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITFETDI
Ga0164301_113163231	3300012960	Soil	MNKKHFNQHMKKLLAAMSITAVSAVFSVAIAQQAPDAPEADTSLRLEARLQPVIAVDASGQARLDVEAGTANDRFTAEVEIAKADFDDLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVH
Ga0164301_116975921	3300012960	Soil	MNKRHLNQQMKKLFTTISIGGLLAVSSIAIAQQAPDVAQQASDIAQQAPEAPDRSNRLEARLQPVIAVDASGQARLDDEVGTGSDRFTSEVEIAKADFAELGITPANGFRDEVVELRVLRGGVLIFSNRLHFSR
Ga0164309_106616002	3300012984	Soil	MNKKHFNQHMKKLLAAMSITAVSAVFSVAIAQQAPDAPEADTSLRLEARLQPVIAVDASGQARLDVEAGTANDRFTAEVEIAKADFDDLGITRGNGFRDEVVQLRVLRGGAQ
Ga0164308_112860622	3300012985	Soil	MKKLLTTMSITAFSALSSLAIAQQAPDAAEADTSLRLEARLQPVIPVDASGQARLDAEIGMANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFSNRLEFSRSQTTSRLRPIFAARPRQSCRLVIRRV*
Ga0164307_104313832	3300012987	Soil	MNKRYLNQHMKKLLTAMSIAAVSAVSSLAIAQQAPDAPEADTSLRLEARLQPVIAVDASGQARLDVEAGMANDRFTAEVEIAKADFGDLGITRGNGFRDEVVELRVLRGGMQIFSHRLQFSRNLI
Ga0163162_113346902	3300013306	Switchgrass Rhizosphere	MNKKHFNQQMKKLLTALSITAVSAVSSVAIAQQAPDAPEADTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITFE
Ga0157376_101360051	3300014969	Miscanthus Rhizosphere	MNKRHFNQRMKKLLTAMSIVAVSAVSSLAIAQQVPDAAEADNSTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLR
Ga0173483_100700691	3300015077	Soil	LIAINKNQQPKTSIEQMHMKKLLTTISIGGLLALSSVAIAQQAPEAADSSNRLEARLQPVIAVDASGQARLDNEVGTGNDRFTAEVEIAKADFAELGITPGNGFRDEVVELRVLRGGVLIFSNRFSFPGIL*
Ga0173480_100135424	3300015200	Soil	MNKKHFNQQMKKLLTALSITAVSAVSSVAIAQQAPDAPEADTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRL
Ga0173480_107958101	3300015200	Soil	MNKKHFNQHMKKLLTAMSIAAVSAVSCVAIAQQAPDAAEVDTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQF
Ga0173478_107285771	3300015201	Soil	MNKKHFNQQMKKLLTALSITAVSAVSSVAIAQQAPDAPEADTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEMEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFA
Ga0132256_1004895041	3300015372	Arabidopsis Rhizosphere	MKKLVTAISFVAFSALSSLAIAQQAPEAAEADASLRLEARLQPVIAVDASGQARLDIEAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVELRVLRGGVLIYSNRLQFSRNLLNDITFE
Ga0132256_1029351511	3300015372	Arabidopsis Rhizosphere	MNKKHFNQQMKKLLTALSITAVSAVSSVAIAQQAPDAPEADTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITF
Ga0132255_1013299822	3300015374	Arabidopsis Rhizosphere	MNKRHFNQHMKKLLAAMSITAVSAVFSVAIAQQAPDAPEADTSLRLEARLQPVIAVDASGQARLDIEAGMANDRFTAEIEIAKADFGDLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNL
Ga0132255_1017673542	3300015374	Arabidopsis Rhizosphere	MNKIHFNQHVKKLFAGMSIAAVSAVSSLAIAQQAPDAAEADTSLRLEGRLQPVIAVDASGQARLDVEPGMANDRFTAEIEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLL
Ga0132255_1040263371	3300015374	Arabidopsis Rhizosphere	MNKKHFNQQMKKLLTALSITAVSAVSSVAIAQQAPDAPEADTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQL
Ga0184608_100187571	3300018028	Groundwater Sediment	MNKSHLNQHMKKVLTALSIAAFAALSSLAIAQQAPDAAETDASISLRLEARLQPVIAVDASGQARLDVEAGTTNDRFTAEVEIAKADFADLGITRGNGFRDEVVELRVLRGGVLIFSNRLQFSRNLVNDITFE
Ga0184621_100879391	3300018054	Groundwater Sediment	MKKLLTTISIGGLLALSSVAIAQQEPEAADSSIRLEVRLQPVIAVDASGQARLDNEVGTANDRFTAEVEIAKSDFAELGITPGNGFRDEVIELRVLRGSVLIFSNRLQFSRNLVNDITFE
Ga0066655_100858712	3300018431	Grasslands Soil	MKKLLTTISISGLLALSSVAIAQQEPEAPDSSIRLEARLQPVIPVDASGQARLDNEPGMANDRFTAEVEIAKADFAELGITPGNGFRDEVVEVRVLRGGVLMFNNRLQFSRNLVNDITFETDIR
Ga0173481_107205441	3300019356	Soil	MHMKKLLTTISIGGLLALSSVAIAQQAPEAADSSNRLEARLQPVIPVDASGQARLDNEPGMANDRFTAEVEIAKADFAELGITRGNGFRDEVVELRVLRGGVLIFSNRL
Ga0173479_100174093	3300019362	Soil	MNKRYFNQHMKKLLTAMSIVAVSAVSSLAIAQQAPDAAEADNSTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITFET
Ga0193704_10160172	3300019867	Soil	MHMKKLLTTISIGGLLALSSVAIAQQAPEAIAQQAPEMADHSNRLEARLQPVIPVDASGQARLDNEVGTGNDRFTSEVEIAKADFAELGITPGNGFRDEVVELRVLRGGVLIFSN
Ga0193693_10401132	3300019996	Soil	MNKRHLNQRMKRLLTTISIGGLLAVSSIAIAQQAPDVAQQASDIAQQAPEAPDRSNRLEARLQPVIAVDASGQARLDDEVGTGSDRFTSEVEIAKADFADLGITPGNGFRDEVVELRVLRGGV
Ga0193730_10417322	3300020002	Soil	MHMKKLLTTISIGGLLALSSVAIAQQAPEVIAQQAPEMADHSNRLEARLQPVIPVDASGQARLDNEVGTGNDRFTSEVEIAKADFAELGITPGNGFRDEVVELRVLRGGVLIFSNR
Ga0179592_103302631	3300020199	Vadose Zone Soil	MKKLLTAMSIAAVSAVSSLAIAQQAPDAPEAVTSLRLEARLQPVIAVDASGQARLDIEAGMANDRFTAEVEIAKADFGDLGITRGNGFRDEVVELRVLRGGVQIFSHR
Ga0193719_100245633	3300021344	Soil	MHMKKLLTTISIGGLLALSSVAIAQQAPEVIAQQAPEMADHSNRLEARLQPVIPVDASGQARLDNEVGTGNDRFTSEVEIAKADFAELGITPGNGFRDEVVELRVLRGGVLIFSNRLQFS
Ga0247802_10184181	3300023077	Soil	MKKLLTTMSIAAVSAVSCVAIAQQAPDAAEVDTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLI
Ga0207692_104797051	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTTISIGGLLAISSIAIAQQAPDIAQQAPEAPDRSNRLEARLQPVIAVDASGQARLDDEVGTGNDRFTSEVEIARADFAELGITPGNGFRDEVVELRVLRGGVLIFSNRLQ
Ga0207688_109030811	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLIALSVAAVSAVSSVAIAQQAPESAEADMSLRLEARLQPVIPVDASGQARLDVEAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVH
Ga0207680_101339772	3300025903	Switchgrass Rhizosphere	MKKLLTALSITAVSAVSSVAIAQQAPDAPEADTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFAVLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITFETDIRG
Ga0207705_100928543	3300025909	Corn Rhizosphere	MKKLLTALSITAVSAVSSVAIAQQAPDAPEADTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITFETDIRG
Ga0207693_106281412	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKRHLTTLLIGSISALSSLAIAQETPEALDSGVRLETRLEPVIAVDASGQARLDNEAGTANDRFTSEVEIAKADFPDLGITPGNGFRDEVVELRVLRGGVMIFSNRLQFSRNLLHDITFE
Ga0207663_105653401	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSIAAVSAVSSLAIAQQAPDAAEADTSLRLEARLQPVIAVDASGQARLDIEAGTANDRFTAEVEIAKADFDDLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITFETDIHG
Ga0207644_100802763	3300025931	Switchgrass Rhizosphere	MNKRYFNQHMKKLLTAMSIVAVSAVSSLAIAQQAPDAAEADNSPSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRL
Ga0207711_103791811	3300025941	Switchgrass Rhizosphere	MKKLLTALSITAVSAVSSVAIAQQAPDAPEADTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHD
Ga0207661_109033161	3300025944	Corn Rhizosphere	MKKLLTTMSIAAVSAVSCVAIAQQAPDAAEVDTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSR
Ga0207668_118101421	3300025972	Switchgrass Rhizosphere	MKKLLTTISIGGLLALSSVAIAQQAPEAADSSIRLEARLQPVIAVDASGQARLDSEVGTGNDRFTAEVEIAKADFAELGITRGNGFRDEVVELRVLRGGVLIFSNRLQFSRNLVN
Ga0207678_114443161	3300026067	Corn Rhizosphere	MKKLLTAMSIVAVSAVSSLAIAQPAPDAAEADNSTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHAITFETDI
Ga0207676_116046622	3300026095	Switchgrass Rhizosphere	MKKLLTAMSIVAVSAVSSLAIAQQAPDAAEADNSPSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFADLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHD
Ga0209474_105765371	3300026550	Soil	MHMKKLLTTISISGLLALSSVAIAQQEPEAPDSSIRLEARLQPVIPVDASGQARLDNEPGMANDRFTAEVEIAKADFAELGITPGNGFRDEVVEVRVLRGGVLIFSNRLQFSRNLVNDITFETDIRGTA
Ga0207612_10063241	3300026836	Soil	MKKLLTTMSIAAVSAVSCVAIAQQAPDAAEVDTSLRLEARLQPVIPVDASGQARLDIDAGTANDRFTAEVEIAKADFANLGITRGNGFRDEVVQLRVLRGGAQIFANRLQFSRNLVHDITFETDIRG
Ga0208475_10314111	3300027018	Soil	MKKLLTTMSIGGLLAFSSVVIAEQAPDIGQQSADIAQQEAQAPDSSIRLEARLQPVIAVDASGQARLDNEAGTANDRFTAEVEIAKADFAELGITPGNGFGDEVVQLRVLRGGVLIFSNR
Ga0207428_106917322	3300027907	Populus Rhizosphere	MNNKHSNQHMKKLLTTISIAAFSTLASVGIAQQAPEVQADVSAMMPQGPDAADSSVRFEARLQPVIAVDASGQARLDSDAGTANDRFTAEVEIAKADFADLGITPRNGFRDEVVELRVLRGGV
Ga0307283_100207151	3300028790	Soil	MNKRYLNQHMKKLLTAMSIAAVSAVSSLVIAQQAPDAPEADTSLRLEARLQPVIAVDASGQARLDVEAGMATDRFTAEVEIAKADFGDLGITRGNGFRDEVVELRVLRGGVPIFSHRLQFSRN
Ga0247827_111567071	3300028889	Soil	MNKRHLNQRMKKILTTMSIAVFSALSSLAIAQQAPDAGTDASGIAQQALDAPEAISSLRLEARLQPVIAVDASGQARLDAEVGMANDRFTAEVEIAKADFADLGITRGNGFRDEVVVLRVLRGGVQIF
Ga0170824_1052251141	3300031231	Forest Soil	MNKRHLNQQMKKLLTVISIGGFLAVSSNALAQQAPDIAQQTPDIAQQAPEAADGSNRLEARLQPVIPVDASGQARLDGEVGTGNDRFTSEVEIAKVDFADLGITPGNGFRDEVVELRVLRGGV
Ga0170824_1197066281	3300031231	Forest Soil	MKKLLTTISIGGLLALSSVAIAQQAPEAIAQQAPEMADRSNRLEARLQPVIPVDASGQARLDNEVGTGNDRFTAEVEIAKADFAELGITPGNGFRDEVVELRRPSWWRTDFQQSPPVFQEPCKRHYV
Ga0170824_1249186691	3300031231	Forest Soil	MNKRHLNQQMKKLFTTISIGGLLAVSSIAIAQQAPDVVQQAPDIAQQAPDAPDRSNRLEARLQPVIAVDASGQARLDDEMGTGNDRFTSEVEIAKADFADLGITPGNGFRDEVVELRVLRGGVLIFSNRLHFSRNLLKRHHV
Ga0170820_178523391	3300031446	Forest Soil	MHMKKLLTTISIGGLLALSSVAIAQQAPEAIAQQAPEMADRSNRLEARLQPVIPVDASGQARLDNEVGTGNDRFTAEVEIAKADFAELGITPGNGFRDEVVELRRPSWWRTDFQQSPPVFQEPCKRHYV
Ga0310907_107119581	3300031847	Soil	MNKRHLNQRMKKILTTMSIAVFSALSSLAIAQQAPDAGTDASGIAQQALDAPEAISSLRLEARLQPVIAVDASGQARLDAEVGMANDRFTAEVEIAKADFADLGITRGNGFRDEVVVLRV
Ga0310892_102108461	3300031858	Soil	MNKRHLNQRMKKILTTMSIAVFSALSSLAIAQQAPDAGTDASGIAQQALDAPEAISSLRLEARLQPVIAVDASGQARLDAEVGMANDRFTAEVEIAKADFSDLGITRGNGFRDEVVQLRVLRGGVQIFSNR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096096

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences