Metagenome Family F096086

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096086
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	51 residues
Representative Sequence	MNRINFSYSALVLVVTGFAVSLTGCGQKQELDPRTQPELVRVVEIGSSS
Number of Associated Samples	93
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.12 %
% of genes near scaffold ends (potentially truncated)	99.05 %
% of genes from short scaffolds (< 2000 bps)	92.38 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.048 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (31.429 % of family members)
Environment Ontology (ENVO)	Unclassified (44.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 28.57% β-sheet: 0.00% Coil/Unstructured: 71.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF02321	OEP	88.57
PF13185	GAF_2	1.90
PF02954	HTH_8	0.95
PF13581	HATPase_c_2	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	177.14

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	78.10 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	40.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	38.10 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	40.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.10 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	40.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.10 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.10 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	32.38 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.10 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	32.38 %
Unclassified	root	N/A	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_106621056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300002908\|JGI25382J43887_10205457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	944	Open in IMG/M
3300005167\|Ga0066672_10518009	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005172\|Ga0066683_10517469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300005174\|Ga0066680_10298829	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300005175\|Ga0066673_10832746	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005176\|Ga0066679_10312402	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300005178\|Ga0066688_10153556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1443	Open in IMG/M
3300005179\|Ga0066684_10606054	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005180\|Ga0066685_10410549	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005181\|Ga0066678_10934965	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005186\|Ga0066676_10370401	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300005186\|Ga0066676_10534201	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300005187\|Ga0066675_11311052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300005337\|Ga0070682_102039785	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005446\|Ga0066686_10529220	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	801	Open in IMG/M
3300005451\|Ga0066681_10314909	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300005518\|Ga0070699_100574931	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300005530\|Ga0070679_101058609	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300005530\|Ga0070679_101510857	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005539\|Ga0068853_100907037	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300005555\|Ga0066692_10875197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300005560\|Ga0066670_10326579	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300005566\|Ga0066693_10474467	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005574\|Ga0066694_10013017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3572	Open in IMG/M
3300005575\|Ga0066702_10229938	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1129	Open in IMG/M
3300005576\|Ga0066708_10395940	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300005841\|Ga0068863_100572129	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300005901\|Ga0075274_1012985	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300006028\|Ga0070717_11209801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300006046\|Ga0066652_100552734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1078	Open in IMG/M
3300006163\|Ga0070715_10871625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300006791\|Ga0066653_10107307	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300006796\|Ga0066665_10170208	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300006914\|Ga0075436_101033836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300009092\|Ga0105250_10550266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300009137\|Ga0066709_100535918	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1655	Open in IMG/M
3300009137\|Ga0066709_101991117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	805	Open in IMG/M
3300009174\|Ga0105241_12601049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300010304\|Ga0134088_10615409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300010326\|Ga0134065_10005538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3200	Open in IMG/M
3300010337\|Ga0134062_10270901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	796	Open in IMG/M
3300010358\|Ga0126370_11903758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300010360\|Ga0126372_13025936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300010396\|Ga0134126_11908849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300012180\|Ga0153974_1133196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300012189\|Ga0137388_11191539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300012199\|Ga0137383_10516049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	875	Open in IMG/M
3300012201\|Ga0137365_11191244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300012208\|Ga0137376_10966576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300012210\|Ga0137378_11421523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300012210\|Ga0137378_11427771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300012211\|Ga0137377_10087158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2946	Open in IMG/M
3300012211\|Ga0137377_10353336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1407	Open in IMG/M
3300012349\|Ga0137387_10412533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	979	Open in IMG/M
3300012351\|Ga0137386_11136901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300012353\|Ga0137367_10702938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300012972\|Ga0134077_10146230	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	941	Open in IMG/M
3300012977\|Ga0134087_10279234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300013307\|Ga0157372_10605061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1277	Open in IMG/M
3300014157\|Ga0134078_10466986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300015193\|Ga0167668_1010517	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2089	Open in IMG/M
3300015373\|Ga0132257_102379116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300016445\|Ga0182038_11827641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300017942\|Ga0187808_10077177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1433	Open in IMG/M
3300018433\|Ga0066667_10421193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1084	Open in IMG/M
3300018433\|Ga0066667_10431776	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1072	Open in IMG/M
3300018433\|Ga0066667_10435042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1068	Open in IMG/M
3300018482\|Ga0066669_10559751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	997	Open in IMG/M
3300022756\|Ga0222622_11422081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300024179\|Ga0247695_1010227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1321	Open in IMG/M
3300024182\|Ga0247669_1037652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300024246\|Ga0247680_1011359	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1305	Open in IMG/M
3300025898\|Ga0207692_10630214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300025906\|Ga0207699_10954899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300025915\|Ga0207693_10177063	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1678	Open in IMG/M
3300025915\|Ga0207693_10510231	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	938	Open in IMG/M
3300025915\|Ga0207693_10556728	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	894	Open in IMG/M
3300025920\|Ga0207649_11186543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300025925\|Ga0207650_10541040	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	976	Open in IMG/M
3300025929\|Ga0207664_10391486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1235	Open in IMG/M
3300025929\|Ga0207664_10595679	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	993	Open in IMG/M
3300025981\|Ga0207640_10994880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300026035\|Ga0207703_10440009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1216	Open in IMG/M
3300026088\|Ga0207641_10831872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	914	Open in IMG/M
3300026309\|Ga0209055_1093573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1218	Open in IMG/M
3300026310\|Ga0209239_1014127	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4136	Open in IMG/M
3300026318\|Ga0209471_1104946	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1218	Open in IMG/M
3300026330\|Ga0209473_1015241	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3681	Open in IMG/M
3300026333\|Ga0209158_1317132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300026528\|Ga0209378_1237541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300026538\|Ga0209056_10176367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1596	Open in IMG/M
3300026540\|Ga0209376_1401581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300026552\|Ga0209577_10544826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300027000\|Ga0207803_1009630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1392	Open in IMG/M
3300027024\|Ga0207819_1006537	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1801	Open in IMG/M
3300027381\|Ga0208983_1105286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300027748\|Ga0209689_1010727	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6067	Open in IMG/M
3300027748\|Ga0209689_1404160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300028828\|Ga0307312_11159088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300031474\|Ga0170818_106927846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1073	Open in IMG/M
3300031736\|Ga0318501_10510485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300032180\|Ga0307471_100848691	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1081	Open in IMG/M
3300033475\|Ga0310811_11337351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.62%
Host-Associated	Host-Associated	12.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.71%
Plants	Host-Associated → Plants	11.43%
Aquatic	Environmental → Aquatic	1.90%
Fungi	Host-Associated → Fungi	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.71%
Freshwater	Environmental → Aquatic → Freshwater	0.95%
Sediment	Environmental → Aquatic → Sediment	0.95%
Mycelium	Host-Associated → Fungi → Mycelium	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.57%
Loam	Environmental → Terrestrial → Soil → Loam	16.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	40.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	31.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.95%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005901	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027024	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42 (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1066210561	3300000955	Soil	LAPMIEIQKIKERHMKNINFSYSALVLVVTAFAVSLTGCGQKRELDPRTQPELVRIVEIGSSSGADP
JGI25382J43887_102054571	3300002908	Grasslands Soil	MNRINFSYSALVLVIAGLVVSLTGCGQKRELDPRTQPELVRVVEIGSSSGADPAFTGVVSAR
Ga0066672_105180092	3300005167	Soil	MNRINFSYSALLLVVTAFAVSLTGCGQKRELDPRTQPELVRVVEIGSSSGADPAFTGV
Ga0066683_105174692	3300005172	Soil	MNRINFSYSALVLVVTGFAVSLTGCGQKQELDPRTQPELVR
Ga0066680_102988291	3300005174	Soil	MKRMNLSYSALVLVVTGFAVTFTGCGHKQELDPRTQPELVRIVEIGSSSGEDPAFTGVVS
Ga0066673_108327461	3300005175	Soil	MNRINFSYSALVLVVTGFAVSLTGCGQKQELDPRTQPELVRIVEIGSSSGADPAFTGVVS
Ga0066679_103124021	3300005176	Soil	MNRINFSYSALVLVVTGLALSLTGCGQKRELDPRTQPELVRVVEIGSSSGADPAFTGVVS
Ga0066688_101535562	3300005178	Soil	MKRMNLSYSALVLVVTGFAVTFTGCGHKQELDPRTQPELVRIVEIGSSSG
Ga0066684_106060541	3300005179	Soil	MNRINFSYSVLVLVVTGLAVSLTGCGQKRELDPRTQPELVRTVVIGSSSGADTAFTG
Ga0066685_104105491	3300005180	Soil	MNRINFSYSALVLVIAGLVVSLTGCGQKRELDPRTQPELVRVVEIGSSSGADPAFTGV
Ga0066678_109349652	3300005181	Soil	MNRINFSYSALLLVVTAFAVSLTGCGQKRELDPRTQPELVRVVEIGSSSGADPAFTGVVSAR
Ga0066676_103704011	3300005186	Soil	MNRINFSYSALVLVIAGLVVSLTGCGQKRELDPRTQPELVRVVEIG
Ga0066676_105342011	3300005186	Soil	MKRMNFSYSALVLVVTGFAVTFTGCGQKQELDPRTQPELVRIVEIGSSSGADPAFTGVVSAR
Ga0066675_113110522	3300005187	Soil	MKRMNFSYSALVLVVTGFAVTFTGCGQKQELDPRTQPELVRIVEIGS
Ga0070682_1020397852	3300005337	Corn Rhizosphere	MKNINFSYSAFLLVITALVVSLTGCGQKRELDPRTQPELVR
Ga0066686_105292202	3300005446	Soil	MDRINLRYSALVLIVTGFAVGLIGCGQKQELDPRTQPELVRIVE
Ga0066681_103149091	3300005451	Soil	MNRINFSYSVLVLVVTGLAVSLTGCGQKRELDPRTQPELVRTVVIGSSSG
Ga0070699_1005749312	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNRINFSYSALVLVVTGFAVSLTGCGQKQELDPRTQPELVRVVEIGSSSGADP
Ga0070679_1010586091	3300005530	Corn Rhizosphere	MKNINFSHFALLLIVAGLVVSLTGCGQKRDLDARTQPELVRVVQIGSSSGIDPAFTGVVS
Ga0070679_1015108571	3300005530	Corn Rhizosphere	MKNINFSYPALVLVVASLAVSLTGCGQKRELDPRTQPELVRIVKIGSSSGADPAFTGVV
Ga0068853_1009070371	3300005539	Corn Rhizosphere	MKNINFSYSALVLVVTAFAVSLTGCGQKRELDPRTQPELVRIVEIG
Ga0066692_108751971	3300005555	Soil	MDRINLRYSALVLFVTGFAVGLIGCGQKQELDPRTQPELVRI
Ga0066670_103265791	3300005560	Soil	MKRMNFSYSALVLVVASLAATLTGCGQKQELDPRTQPELVRIVEIGSSSG
Ga0066693_104744672	3300005566	Soil	MKRMNFSYSALVLVVASLAATLTGCGQKQELDPRTQPELVRIVEIGSSSGADPAF
Ga0066694_100130171	3300005574	Soil	MNRINFSYSALLLVVTAFAVSLTGCGQKRELDPRTQPELVRVVEIGSSS
Ga0066702_102299381	3300005575	Soil	MKRMNFSYSALVLVVTGFAVTFTGCGQKQELDPRTQPELVR
Ga0066708_103959401	3300005576	Soil	MNRINFSYSALVLVVTAFAVSLTGCGQKQELDPRTQPELVR
Ga0068863_1005721291	3300005841	Switchgrass Rhizosphere	MKNINFSYPALVLVVASLAVSLTGCGQKRELDPRTQPELVRIVEIGSSSG
Ga0075274_10129852	3300005901	Rice Paddy Soil	MIEIHKEKKERHMKNINLLLIVAGLVVSLTGCSQKRDLDPRTQPELVRVVQIGSSSGIDP
Ga0070717_112098012	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKRMNFSYSALVLVVTGLAVTLTGCGQKQELDPRTQPE
Ga0066652_1005527341	3300006046	Soil	MNRVNSSYSALVLVVTGLAVSLIGCSQKRELDPRTQPELVR
Ga0070715_108716252	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNFTYSAVVITGLVVSLTGCGEKRELDPRTQPELVR
Ga0066653_101073072	3300006791	Soil	MNRINFSYSALVLVIAGLVVSLTGCGQKRELDPRTQPELVRV
Ga0066665_101702082	3300006796	Soil	MNRINFSYSALVLVVTAFAVSLTGCGQKQELDPRTQPELVRIVEIGSSSGAD
Ga0075436_1010338361	3300006914	Populus Rhizosphere	MKYINSSSVLMLVIIGLAISLTGCGQKKELDPRTQP
Ga0105250_105502661	3300009092	Switchgrass Rhizosphere	MNRINFSYPVLVLIVTGLAVSLTGCGQKRELDPRTEP
Ga0066709_1005359181	3300009137	Grasslands Soil	MNRVNSSYSALVLVVTGLAVSLIGCSQKRELDPRTQPELVRIVEIGSSSGADPAF
Ga0066709_1018939682	3300009137	Grasslands Soil	MKEINFSYSALVITSLVVSLAGCGQRQESDPRTTPELV
Ga0066709_1019911172	3300009137	Grasslands Soil	MKRMNFSYSALVLVVIGLAVTLTGCGQKQELDPRTQPELVRIVVIGSSSG
Ga0105241_126010492	3300009174	Corn Rhizosphere	MIEIQKIKKERHMKNINFSYSALVLVVTAFAISLTGCGQKRESDPRTQPELVRIVRIGSSSGADPAFTGT
Ga0134088_106154091	3300010304	Grasslands Soil	MIKTLNKRKNYMNRINFSYSALVLVIAGLIVSLTGCGQKRELDPRTQPELVRVVEIGSSSGA
Ga0134065_100055386	3300010326	Grasslands Soil	MNRINFSYSALVLVVTGLAVSLTGCGQKQELDPRT
Ga0134062_102709011	3300010337	Grasslands Soil	MNRINFSYPVLVLIVTGLAVSLTGCGQKRELDPRTQPELVRIVEIGSSSGADPA
Ga0126370_119037581	3300010358	Tropical Forest Soil	MKNINFSYSALVLVVGSLTLSLTGCGQKRELDPRTQPELVRIVEIG
Ga0126372_130259361	3300010360	Tropical Forest Soil	MKRMNFSYPALVLVVVVTGFAATLTGCGQKRELDPRTQPELVRIVEIGSSSGADPAFTGV
Ga0134126_119088492	3300010396	Terrestrial Soil	MIENPTNKRKSHMNRINFSYSALVLVVTGLAVSLTGCGQKRELDPRTQPELVRIVEIGSSSE
Ga0153974_11331961	3300012180	Attine Ant Fungus Gardens	MIEIHKEKKERHMKNINFSHFALPLLIVAGLVVSLTGCSQKRDLDPRTQPELVRVVQIGSSSGI
Ga0137388_111915392	3300012189	Vadose Zone Soil	MKRINFSYPALVLVIVGFAVSLTGCGQRRELDPRTQPELVRIV
Ga0137383_105160491	3300012199	Vadose Zone Soil	MKPMNFSYSSLVLVVGSLAVSLTGCGQKRELDPRTQPELVR
Ga0137365_111912442	3300012201	Vadose Zone Soil	MKRMNFSYFALVLAVTGFAATLTGCGQKQELDPRTQPELVRIVEIGSSSGADPAF
Ga0137376_109665762	3300012208	Vadose Zone Soil	MKRMNLSYSALVLVVTGFAVTFTGCGHKQELDPRTQPELVRIVEIGSSSGE
Ga0137378_114215231	3300012210	Vadose Zone Soil	MKENQKIKKERHMKNIKFSYSALVLVVAGLSISLTGCGQKRELDPRIQPELVRTVEIGSSSGADPAFTG
Ga0137378_114277712	3300012210	Vadose Zone Soil	MKRMNFSYSALVLVVASLAATLTGCGQKQELDPRTQPELVRIVEIGSSS
Ga0137377_100871581	3300012211	Vadose Zone Soil	MIENPTNKRKSHMNRINFSYSALLLVVTGFAVSLTGCGQKQELDPRTQPELVRIVEIGSS
Ga0137377_103533362	3300012211	Vadose Zone Soil	MNRINFSYSALALVVIGLALSLTGCGQKRELDPRTQPELVRVVEIGSSSGAD
Ga0137387_104125331	3300012349	Vadose Zone Soil	MIKTLNKRKNYMNRINFSYSALVLVIAGLVVSLTGCGQKRELDPRTQPELVRVVEIGSSS
Ga0137386_111369011	3300012351	Vadose Zone Soil	MNFSYFALVLAVTGFAATLTGCGQKQELDPRTQPELVRIVEIGSSSGADPAFT
Ga0137367_107029382	3300012353	Vadose Zone Soil	MKRMNLSYSALVLVVTGFAVTFTGCGHKQELDPRTQPELVRIVEIGSSSGADPAFTGVAS
Ga0134077_101462301	3300012972	Grasslands Soil	MKRMNFSYSALVLVVTGFAVSLTGCGQKQELDPRTQPELVRVVEIGSSS
Ga0134087_102792342	3300012977	Grasslands Soil	MIKIHTSKRKTHVNRINLNYSVLVLVVTGLAVSLIGCSQKRELDPRTEPELVRIVEIGSSSGAD
Ga0157372_106050612	3300013307	Corn Rhizosphere	MIEIQKIKKERHMKNINFSYSALVLVVTAFAVSLTGCGQKRELDPRTQPELVRIVEIGSSSGADPAFTGVV
Ga0134078_104669861	3300014157	Grasslands Soil	MNRINFSYSALVLVVTGLAVSLTGCGQKQELDPRTNPELVRIVEIGPPSGADPAFTG
Ga0167668_10105171	3300015193	Glacier Forefield Soil	MIKIQKIKKERHMKNINFSYFALVLVVTGFAVSLTGCGQKRELDPRTQPELVRTVEIGSSSGADPAFTGVVSA
Ga0132257_1023791161	3300015373	Arabidopsis Rhizosphere	MDRLNFNYSALVLVVTGFAVSLTGCRQERKLDPRTQPELVRIVE
Ga0182038_118276412	3300016445	Soil	MNQINFSYSVLVLVVTGFAVSLTGCGQKQELDPRTQPELVRIVEIGSSS
Ga0187808_100771772	3300017942	Freshwater Sediment	MIEIHKEKKERHMKNIKFSYSAFLLVITALVVSLTGCGQKRELDPRTQPELVRIVEIGSS
Ga0066667_104211932	3300018433	Grasslands Soil	MNRINFSYSALVLVVTAFAVSLTGCGQKQELDPRTQPELVRIVEIGSSSGADPAFTG
Ga0066667_104317762	3300018433	Grasslands Soil	MDRINLRYSALVLIVTGFAVGLIGCGQKQELDPRTQPELVRIVEIDSPSGADRAFTGVVS
Ga0066667_104350421	3300018433	Grasslands Soil	MNRINFSYSVLVLVVTGLAVSLTGCGQKPELDPRTQPELVRTVVIGSSSGAD
Ga0066669_105597511	3300018482	Grasslands Soil	MNRINFSYSALVLVVTGLAVSLTGCGQKQELDPRTQPELVRVVEIGSSSGADPAFTGV
Ga0222622_114220811	3300022756	Groundwater Sediment	MNRINFSYSALVLVVTGLALSLTGCGQKRELDPRTQPELVRV
Ga0247695_10102272	3300024179	Soil	MNRINFSYSALVLVVTGFAVSLTGCGQKQELDPRTQPELVRVVEIGSSS
Ga0247669_10376522	3300024182	Soil	MNRINFGYSALVLVVTGFAVSLTGCGQKQELDPRTQPELVRIVEIGSSSGADPAFTGVV
Ga0247680_10113591	3300024246	Soil	MNRINFSYSALVLVVTGFAVSLTGCGQKQELDPRTQPELVRVVE
Ga0207692_106302141	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKQMNFTYSTLVITGLIVSLIGCGEKRELDPRTQPELVRTV
Ga0207699_109548992	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MNRINFGYSALVLVVTGFAVSLTGCGQKQELDPRTQPELVRIVEIGSSSGAD
Ga0207693_101770632	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKNINFSYSALVLVVTAFAVSLTGCSQKRELDPRTQPE
Ga0207693_105102312	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNRINLSYSALVLVVIGFAVSLTGCGQKQELDPRTQPELVRVVEIGSSSGADPAFTGVVS
Ga0207693_105567282	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKYINSSSVLMLVIIGLAISLTGCGQKKELDPRTQPELVRIVEVGSSAGADPA
Ga0207649_111865432	3300025920	Corn Rhizosphere	MKNINFSYPALVLVVASLAVSLTGCGQKRELDPRTQPELVRIVEIGSSSGADPAFI
Ga0207650_105410402	3300025925	Switchgrass Rhizosphere	MKNINFSYPALVLVVASLAVSLTGCGQKRELDPRTQPELVRIVEIG
Ga0207664_103914861	3300025929	Agricultural Soil	MKRMNFNHSALVLIIIGFAVSLTGCGQKRELDPRTQPELVRTVVV
Ga0207664_105956792	3300025929	Agricultural Soil	MKRMNFSYPAVVLVVASLAVSLTGCGQKRELDPRTQPELVRIVEIGSSSGADPAFTGVVS
Ga0207640_109948802	3300025981	Corn Rhizosphere	VIEIQKIKERHMKNINFSYPALVLVVASLAVSLTGCGQKRELDPRTQPELVRIVEIG
Ga0207703_104400091	3300026035	Switchgrass Rhizosphere	MKNINFSYPALVLVVASLAVSLTGCGQKRELDPRTQPELVR
Ga0207641_108318722	3300026088	Switchgrass Rhizosphere	MDRIHFSYSALVLVVAGFALSLTGCGQKRELDPRTQPEL
Ga0209055_10935731	3300026309	Soil	MKRMNFSYSTLVLIVTGLAVTLTGCGQKQELDPRTQPELVRVVDI
Ga0209239_10141271	3300026310	Grasslands Soil	MNRINFSYSALVLVVTGFAVSLTGCGQKQELDPRTQPELVRIVEIGSSSGADPAFTGVV
Ga0209471_11049462	3300026318	Soil	MNRINFSYSALVLVIAGLVVSLTGCGQKRELDPRTQPELV
Ga0209473_10152411	3300026330	Soil	MNRINFSYSALVLVVTGLALSLTGCGQKRELDPRT
Ga0209158_13171322	3300026333	Soil	MKRINFSYPALVLIIVGFAVSLTGCGQKQELDPRTQPELVRVVEIG
Ga0209378_12375411	3300026528	Soil	MDRINLRYSALVLIVTGFAVGLIGCGQKQELDPRTQPELVRIVEIDSPSGA
Ga0209056_101763672	3300026538	Soil	MNRINFSYSALLLVVTAFAVSLTGCGQKRELDPRTQPELVRVVEIGSSSGADPAFTGVVS
Ga0209376_14015811	3300026540	Soil	MDRINLRYSALVLIVTGFAVGLIGCGQKQELDPRTQPELVRIVELDSPSGA
Ga0209577_105448262	3300026552	Soil	MIKIHTSKGKNHMNRINFSYSVLVLVVTGLAVSLTGCGQKRELDPRTQPELVRIVEVGSPSG
Ga0207803_10096301	3300027000	Tropical Forest Soil	MRKINFSYYALVIAGLVVSFAGCGQKHELDPRTQPELVRTVE
Ga0207819_10065371	3300027024	Tropical Forest Soil	MRKINFSYYALVIAGLVVSFAGCGQKHELDPRTQPELVRTVEIGSSSGADPAFTGVVSAR
Ga0208983_11052862	3300027381	Forest Soil	MKRINFSYPALVLIIVGFAVSLTGCGQKQELDPRTQPELVR
Ga0209689_10107278	3300027748	Soil	MNRINFSYSALVLVIASLVVSLTGCGQKRELDPRTQPELVRVVEIGSSSGADPAF
Ga0209689_14041602	3300027748	Soil	MNRINFSYSALLLVVTAFAVSLTGCGQKRELDPRTQPELVRVVEIGSSSGADPAF
Ga0307312_111590882	3300028828	Soil	MKNINFSYSALVLVVTAFAVSLTGCGQKRELDPRTQPELVRIVEIGSSSGADP
Ga0170818_1069278462	3300031474	Forest Soil	MNRINFSYSALVLGVAGLVVSLTGCGQKRELDPRTQ
Ga0318501_105104851	3300031736	Soil	MKKMIFNYSALIIAGLVVSLTGCGQKQELDPRTQPELVRIVEIGSSSG
Ga0307471_1008486911	3300032180	Hardwood Forest Soil	MKRMNFSYSALVLVVTGLAVTLTGCGQKQELDPRTQPELVRTVVIGSSS
Ga0310811_113373512	3300033475	Soil	MIEIQKIKKERHMKNINFSYSALVLVVTAFAISLTGCGQKRESDPRTQPELVRIVRIGSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096086

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences