NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F096074

Metagenome / Metatranscriptome Family F096074

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096074
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 62 residues
Representative Sequence MKKILGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDAENALDAGRWKVIDK
Number of Associated Samples 76
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 74.29 %
% of genes near scaffold ends (potentially truncated) 18.10 %
% of genes from short scaffolds (< 2000 bps) 79.05 %
Associated GOLD sequencing projects 67
AlphaFold2 3D model prediction Yes
3D model pTM-score0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (79.048 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(56.191 % of family members)
Environment Ontology (ENVO) Unclassified
(91.429 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(70.476 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 11.36%    β-sheet: 30.68%    Coil/Unstructured: 57.95%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF06067DUF932 1.90
PF01381HTH_3 0.95
PF00239Resolvase 0.95
PF07275ArdA 0.95
PF14743DNA_ligase_OB_2 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.95
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.95
COG4734Antirestriction protein ArdADefense mechanisms [V] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A79.05 %
All OrganismsrootAll Organisms20.95 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000158|SI54feb11_100mDRAFT_c1027989Not Available889Open in IMG/M
3300000167|SI39nov09_120mDRAFT_c1008127Not Available3369Open in IMG/M
3300000949|BBAY94_10212711Not Available520Open in IMG/M
3300001683|GBIDBA_10009367Not Available7495Open in IMG/M
3300002242|KVWGV2_10379241Not Available900Open in IMG/M
3300002511|JGI25131J35506_1062493Not Available518Open in IMG/M
3300002760|JGI25136J39404_1011801All Organisms → Viruses → Predicted Viral1558Open in IMG/M
3300002760|JGI25136J39404_1052606Not Available755Open in IMG/M
3300005427|Ga0066851_10074682All Organisms → Viruses → Predicted Viral1122Open in IMG/M
3300005605|Ga0066850_10334144Not Available531Open in IMG/M
3300006164|Ga0075441_10024699Not Available2468Open in IMG/M
3300006750|Ga0098058_1195163Not Available527Open in IMG/M
3300006751|Ga0098040_1027563Not Available1822Open in IMG/M
3300006751|Ga0098040_1056227All Organisms → Viruses → Predicted Viral1217Open in IMG/M
3300006751|Ga0098040_1212457Not Available564Open in IMG/M
3300006753|Ga0098039_1109210Not Available951Open in IMG/M
3300006753|Ga0098039_1273318Not Available566Open in IMG/M
3300007758|Ga0105668_1129740Not Available918Open in IMG/M
3300007963|Ga0110931_1058652All Organisms → Viruses → Predicted Viral1162Open in IMG/M
3300007963|Ga0110931_1209030Not Available582Open in IMG/M
3300008050|Ga0098052_1031533Not Available2406Open in IMG/M
3300008050|Ga0098052_1076987All Organisms → Viruses → Predicted Viral1387Open in IMG/M
3300008051|Ga0098062_1044234Not Available663Open in IMG/M
3300008216|Ga0114898_1035345All Organisms → Viruses → Predicted Viral1651Open in IMG/M
3300008216|Ga0114898_1127852Not Available743Open in IMG/M
3300008216|Ga0114898_1142713Not Available693Open in IMG/M
3300008218|Ga0114904_1103869Not Available689Open in IMG/M
3300009129|Ga0118728_1016097Not Available5144Open in IMG/M
3300009173|Ga0114996_10620986Not Available800Open in IMG/M
3300009409|Ga0114993_10423624Not Available998Open in IMG/M
3300009425|Ga0114997_10015280All Organisms → cellular organisms → Bacteria5337Open in IMG/M
3300009481|Ga0114932_10688272Not Available595Open in IMG/M
3300009603|Ga0114911_1201534Not Available540Open in IMG/M
3300009604|Ga0114901_1006899Not Available5185Open in IMG/M
3300009604|Ga0114901_1209736Not Available560Open in IMG/M
3300009605|Ga0114906_1231302Not Available609Open in IMG/M
3300009605|Ga0114906_1251123Not Available576Open in IMG/M
3300009620|Ga0114912_1106402Not Available670Open in IMG/M
3300009705|Ga0115000_10500895Not Available764Open in IMG/M
3300009706|Ga0115002_10612539Not Available778Open in IMG/M
3300010149|Ga0098049_1022364Not Available2077Open in IMG/M
3300010155|Ga0098047_10258602Not Available661Open in IMG/M
3300013098|Ga0164320_10594450Not Available575Open in IMG/M
3300013103|Ga0164318_11432388Not Available556Open in IMG/M
3300017705|Ga0181372_1008149Not Available1932Open in IMG/M
3300017705|Ga0181372_1024796All Organisms → Viruses → Predicted Viral1021Open in IMG/M
3300021442|Ga0206685_10022659All Organisms → cellular organisms → Bacteria1996Open in IMG/M
3300021442|Ga0206685_10281977Not Available564Open in IMG/M
(restricted) 3300022902|Ga0233429_1217361Not Available667Open in IMG/M
(restricted) 3300023210|Ga0233412_10170200Not Available938Open in IMG/M
(restricted) 3300024520|Ga0255047_10436454Not Available659Open in IMG/M
3300025027|Ga0207885_109137Not Available666Open in IMG/M
3300025066|Ga0208012_1004323All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria → Candidatus Woesebacteria bacterium3002Open in IMG/M
3300025096|Ga0208011_1003571All Organisms → Viruses → Predicted Viral4902Open in IMG/M
3300025096|Ga0208011_1067603Not Available800Open in IMG/M
3300025103|Ga0208013_1001919Not Available9038Open in IMG/M
3300025112|Ga0209349_1107873Not Available787Open in IMG/M
3300025118|Ga0208790_1143177Not Available666Open in IMG/M
3300025125|Ga0209644_1030321Not Available1203Open in IMG/M
3300025125|Ga0209644_1170254Not Available518Open in IMG/M
3300025128|Ga0208919_1002159All Organisms → cellular organisms → Bacteria10536Open in IMG/M
3300025128|Ga0208919_1142338Not Available748Open in IMG/M
3300025133|Ga0208299_1029849All Organisms → Viruses → Predicted Viral2286Open in IMG/M
3300025141|Ga0209756_1126457Not Available1061Open in IMG/M
3300025241|Ga0207893_1032568Not Available739Open in IMG/M
3300025251|Ga0208182_1002086All Organisms → cellular organisms → Bacteria8499Open in IMG/M
3300025264|Ga0208029_1065602Not Available721Open in IMG/M
3300025277|Ga0208180_1002739All Organisms → cellular organisms → Bacteria7981Open in IMG/M
3300025280|Ga0208449_1017070Not Available2359Open in IMG/M
3300025873|Ga0209757_10005177Not Available3326Open in IMG/M
3300025873|Ga0209757_10083397All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300025873|Ga0209757_10095732Not Available906Open in IMG/M
3300025873|Ga0209757_10144961Not Available742Open in IMG/M
3300026103|Ga0208451_1023066Not Available705Open in IMG/M
3300027685|Ga0209554_1186698Not Available613Open in IMG/M
3300027685|Ga0209554_1197747Not Available588Open in IMG/M
3300027714|Ga0209815_1026159Not Available2345Open in IMG/M
3300027779|Ga0209709_10076966Not Available1821Open in IMG/M
3300027779|Ga0209709_10138046All Organisms → cellular organisms → Bacteria1214Open in IMG/M
3300027839|Ga0209403_10444938Not Available669Open in IMG/M
(restricted) 3300027861|Ga0233415_10011580Not Available3475Open in IMG/M
3300028177|Ga0257122_1090209Not Available883Open in IMG/M
3300028192|Ga0257107_1038972All Organisms → Viruses → Predicted Viral1487Open in IMG/M
3300028448|Ga0256383_103199Not Available1203Open in IMG/M
3300028706|Ga0257115_1167423Not Available512Open in IMG/M
3300031519|Ga0307488_10540393Not Available688Open in IMG/M
3300031605|Ga0302132_10017153Not Available3940Open in IMG/M
3300031605|Ga0302132_10119956All Organisms → Viruses → Predicted Viral1315Open in IMG/M
3300031605|Ga0302132_10220352Not Available907Open in IMG/M
3300031606|Ga0302119_10032155Not Available2217Open in IMG/M
3300031606|Ga0302119_10083529Not Available1308Open in IMG/M
3300031606|Ga0302119_10135970Not Available983Open in IMG/M
3300031606|Ga0302119_10284181Not Available621Open in IMG/M
3300031627|Ga0302118_10234097Not Available868Open in IMG/M
3300031627|Ga0302118_10493093Not Available538Open in IMG/M
3300031675|Ga0302122_10263049Not Available623Open in IMG/M
3300031701|Ga0302120_10035567All Organisms → Viruses → Predicted Viral2140Open in IMG/M
3300031701|Ga0302120_10097387Not Available1198Open in IMG/M
3300031775|Ga0315326_10431573Not Available853Open in IMG/M
3300032011|Ga0315316_10397133Not Available1158Open in IMG/M
3300032032|Ga0315327_10814275Not Available566Open in IMG/M
3300032048|Ga0315329_10134104Not Available1278Open in IMG/M
3300032360|Ga0315334_10256190All Organisms → Viruses → Predicted Viral1441Open in IMG/M
3300032360|Ga0315334_10325647All Organisms → Viruses → Predicted Viral1285Open in IMG/M
3300032360|Ga0315334_11044669Not Available707Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine56.19%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean14.29%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater8.57%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater3.81%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine1.90%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.90%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.90%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment1.90%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.95%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.95%
Background SeawaterEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater0.95%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.95%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.95%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.95%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume0.95%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.95%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.95%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.95%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000158Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 54 02/08/11 100mEnvironmentalOpen in IMG/M
3300000167Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 120mEnvironmentalOpen in IMG/M
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300001683Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assemblyEnvironmentalOpen in IMG/M
3300002242Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey matEnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300005427Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65EnvironmentalOpen in IMG/M
3300005605Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300007758Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008051Marine viral communities from Cariaco Basin, Caribbean Sea - 23_WHOI_OMZEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300009129Combined Assembly of Gp0139513, Gp0139514EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009620Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300013098Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cmEnvironmentalOpen in IMG/M
3300013103Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay9, Core 4571-4, 0-3 cmEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300021442Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015EnvironmentalOpen in IMG/M
3300022902 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_135_MGEnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025027Marine viral communities from the Pacific Ocean - LP-31 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025241Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025277Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026103Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155 (SPAdes)EnvironmentalOpen in IMG/M
3300027685Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027839Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300028177Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_120EnvironmentalOpen in IMG/M
3300028192Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500mEnvironmentalOpen in IMG/M
3300028448Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 300mEnvironmentalOpen in IMG/M
3300028706Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_100mEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031605Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1EnvironmentalOpen in IMG/M
3300031606Marine microbial communities from Western Arctic Ocean, Canada - AG5_TmaxEnvironmentalOpen in IMG/M
3300031627Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1EnvironmentalOpen in IMG/M
3300031675Marine microbial communities from Western Arctic Ocean, Canada - CB21_SCMEnvironmentalOpen in IMG/M
3300031701Marine microbial communities from Western Arctic Ocean, Canada - AG5_BottomEnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300032032Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315EnvironmentalOpen in IMG/M
3300032048Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315EnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SI54feb11_100mDRAFT_102798923300000158MarineMEAKKILGINSTVMNGIEKTTVTKITSKGITLTGKKGEQSLIFPLKDAEAALKAGRWKVVDND*
SI39nov09_120mDRAFT_100812773300000167MarineMAKFSLSEGKEMEAKKILGINSTVMNGIEKTTVTKITSKGITLTGKKGEQSLIFPLKDAEAALKAGRWKVVDND*
BBAY94_1021271123300000949Macroalgal SurfaceMKKILGINSVVMNGSEKTTVTKITSKGVTLKGKKSLTFPLKDVEKQLQAGRWKGFDNE*
GBIDBA_1000936793300001683Hydrothermal Vent PlumeMAKFSLSEGKEMEAKKILGINSTVMNGIEKTTVTKITSKGITLTGKKGEQSLTFPLKDAEAALKAGRWKVVDND*
KVWGV2_1037924123300002242Marine SedimentMKKILGINSVVMNGSEKTTVTKITSKGVTLKGKKSLTFPLKDVEKQLQTGRWKVFDNE*
JGI25131J35506_106249323300002511MarineMKKILGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDAENALDAGRWKVIDK
JGI25136J39404_101180133300002760MarineMEAKKILGINSTVMNGIEKTTVTKITSKGITLTGKKGEQSLTFPLKDAEAALKAGRWKVIDND*
JGI25136J39404_105260613300002760MarineNERVVIMKKILGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDAEKALDAGRWKVIDKKNI*
Ga0066851_1007468243300005427MarineMKTLGINSTVMNGIERTTVTKITSKGVTLTGKKGKQSLTFPLKDAEALLEKGTWKVIEP*
Ga0066850_1033414413300005605MarineMKTLGINSTVMNGIERTTVTKITSKGVTLTGKKGKQSLTFPLKDAEALLEKGTWKVIE
Ga0075441_1002469963300006164MarineMKVLGINSIVMNGIEKTKVTKITSKGVTLTGEKGKQSLTFPLEGVETYLKKGIWKVIT*
Ga0098058_119516313300006750MarineMKKILGINSVVMNGIEKTTVTKITSKNITLTGKKGEQSLTFPLKDAEAALKAGRWKVVDN
Ga0098040_102756343300006751MarineMKKVLGINSVVMNGIEKTKVTKITSKGVTLTGEKGKQSLTFPLEGVEKYLKSGHWKVINNG*
Ga0098040_105622723300006751MarineMKTLGIGSVVMNGIEETTVTKITSKGVTLTGKKGKQSLTFPLKGVETYLAKGTWKVIHEDETDT*
Ga0098040_121245723300006751MarineMKKILGINSVVMNGIEKTTVTKITSKDITLTGKKGEQSLTFPLKDAEAAIKAGRWKVVDND*
Ga0098039_110921023300006753MarineMAKFSLSEGKEMKKILGINSVVMNGIEKTTVTKITSKNITLTGKKGEQSLTFPLKDAEAALKAGRWKVVDND*
Ga0098039_127331813300006753MarineMKKILGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDAEKALDTGKWKVVDKKNI*
Ga0105668_112974033300007758Background SeawaterMKKILGINSIVMNGIEKTTVTKITSKGITLTGKKGKQSLTFPLKDAENALDAGRWKVIDKKNI*
Ga0110931_105865223300007963MarineMKKILGINSVVMNGSEKTTVTKITSKGVTLTGKKGKQSLTFPLKDVEKQLQAGRWKVVR*
Ga0110931_120903013300007963MarineMGNMKGNDNMKILGLNSIVMNGVEETTVTKITSKGVTLTGKKGKQSLTFPLKDAENALKAGRWKIS
Ga0098052_103153313300008050MarineMKKILGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDAEKALDTGKWKVVDKKNT*
Ga0098052_107698743300008050MarineVVKMKVLGINSVVMNGIEKTKVTKITSKGVTLTGEKGKQSLTFPLEGVEKYLKKGIWKVINK*
Ga0098062_104423423300008051MarineMAKFSLSEGKEMKKILGINSVVDILGRKNTVTKITSKGVTLTGEKGEQSLTFPLKDAEAAIKAGRWKVVDND*
Ga0114898_103534513300008216Deep OceanMAKFSLSEGKEMKKILGINSVVMNGIEKTTVTKITSKNITLTGKKGEQSLTFPLKDAEAAIKAGRWKVVDNE*
Ga0114898_112785233300008216Deep OceanLLKGRKQMDDMKSLKIGSQIMNGIEKTTVTNITPEGITLTGEKGKQFLTFPVKGVEHYLEKGIWKII*
Ga0114898_114271313300008216Deep OceanMAKFSLSEGKEMKKILGINSVVMNGIEKTTVTKITSKDITLTGKKGEQSLTFPLKDAEAAIKAGRWKVVDND*
Ga0114904_110386923300008218Deep OceanMAKFSLSEGKEMKKILGINSVVMNGIEKTTVTKITSKNITLTGKKGEQSLTFPLKDAEAALKAGRWKVIDNE*
Ga0118728_101609723300009129MarineMKTLGINSTVMNGIEKTTVTKITTKGITLTGKGGSKSLTFPLKDAETYLKKGTWKVIEP*
Ga0114996_1062098623300009173MarineMKILGINSVVMNGIEKTKVTKITSKGVTLTGEKGKQSLTFPLGGVETYLKNGTWKVIPSAE*
Ga0114993_1042362413300009409MarineMAKVSFSEGKEMKKILGINSVVMNGIEKTTVTKITAKGITLTGKKGEQSLTFPLKDAEAAIQAGRWKVVDND*
Ga0114997_1001528053300009425MarineMKKLLGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDVEKALDTGKWKVIK*
Ga0114932_1068827223300009481Deep SubsurfaceMKKILGINSVVMNGSEKTTVTKITSKGVTLKGKKSLTFPLKDVEKQLQTGRWKVFDNE
Ga0114911_120153423300009603Deep OceanMDDMKSLKIGSQIMNGIEKTTVTNITPEGITLTGEKGKQFLTFPVKGVEHYLEKG
Ga0114901_100689973300009604Deep OceanMDDMKSLKIGSQIMNGIEKTTVTNITPEGITLTGEKGKQFLTFPVKGVEQYLEKGIWKII
Ga0114901_120973633300009604Deep OceanMKILGINSVVMNGIEKTKVTKITSKGVTLTGEKDKQSLTFPLEGVEKYLKSGTWKVIE*
Ga0114906_123130213300009605Deep OceanKILGINSVVMNGIEKTTVTKITSKDITLTGKKGEQSLTFPLKDAEAAIKAGRWKVVDND*
Ga0114906_125112313300009605Deep OceanKILGINSVVMNGIEKTTVTKITSKDITLTGKKGEQSLTFPPKDAEAAIKAGRWKVVDND*
Ga0114912_110640213300009620Deep OceanMAKFSLSEGKEMKKILGINSVVMNGIEKTTVTKITSKDITLTGKNGEQSLTFPLKDAEAAIKAGRWKVVDND*
Ga0115000_1050089513300009705MarineMKQLGINSTVMNGIEKTTVTKITAEGVTLTGIKGKQSLTFPLKDVEVALKAGRWKVVDV*
Ga0115002_1061253923300009706MarineMKQLGINSTVMNGIEKTTVTKITAEGVTLTGIKGKQSLTFPLKDVEAALKAGRWKVADV*
Ga0098049_102236473300010149MarineMKKILGINSVVMNGIEKTTVTKITSKNITLTGKKGEQSLTFPLKDAEAAIKAGRWKVVDND*
Ga0098047_1025860223300010155MarineMKKILGINSVVMNGIEKTTVTKITSKNITLTGKKGEQSLTFPLKDAEAALKAGRW
Ga0164320_1059445013300013098Marine SedimentMKKILGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLRDAEKALDKGTWKVIDK
Ga0164318_1143238813300013103Marine SedimentMEAKKILGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDAEKALDTGKWKVVDKKNT*
Ga0181372_100814963300017705MarineMKKILGINSTVMNGIEKTTVTKITSESVTLTGKKGKQSLTFPLRDAEKALDKGTWKVIDK
Ga0181372_102479633300017705MarineMAKFSLSEGKERKKILGINSVVMNGIEKTTVTKITSKDITLTGKKGEQSLTFPLKDAEAAIKAGRWKVVDND
Ga0206685_1002265943300021442SeawaterMKKILGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDAEKALDTGKWKVVDRKNI
Ga0206685_1028197733300021442SeawaterMKKILGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDAEKALDTGKWKVVDKKNI
(restricted) Ga0233429_121736113300022902SeawaterMAKFSLSEGKEMEAKKILGINSTVMNGIEKTTVTKITSKGITLTGKKGEQSLIFPLKDAEAALKAGRWKVVDND
(restricted) Ga0233412_1017020023300023210SeawaterMKKTLGINSIVMNGIEKTTVTKITSKGVTLTGKSGNKSLTFPLKDAEAYLKKGTWKVIEI
(restricted) Ga0255047_1043645413300024520SeawaterMKKILGINSVVMNGIEKTTVTKITTEGVTLTGKKGKQSLTFPLKDAENALDAGRWKVIDK
Ga0207885_10913713300025027MarineMEAKKILGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDAENALDAGRWKVVDKKNI
Ga0208012_100432343300025066MarineMKKVLGINSVVMNGIEKTKVTKITSKGVTLTGEKGKQSLTFPLEGVEKYLKSGHWKVINN
Ga0208011_100357133300025096MarineMKTLGINSTVMNGIERTTVTKITSKGVTLTGKKGKQSLTFPLKDAEALLEKGTWKVIEP
Ga0208011_106760333300025096MarineMKKILGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDAEKALDKGTWKVIDK
Ga0208013_1001919123300025103MarineMKKILGINSVVMNGIEKTTVTKITSKDITLTGKKGEQSLTFPLKDAEAAIKAGRWKVVDN
Ga0209349_110787323300025112MarineMKKILGINSVVMNGIEKTTVTKITSESVTLTGKKGKQSLTFPLRDAEKALDKGTWKVIDK
Ga0208790_114317723300025118MarineMKTLGIGSVVMNGIEETTVTKITSKGVTLTGKKGKQSLTFPLKGVETYLAKGTWKVIHEDETDT
Ga0209644_103032143300025125MarineMKKILGINSVVDILGRKNTVTKITSKGVTLTGKKGEQSLTFPLKDAEKALDAGRWKVIDK
Ga0209644_117025413300025125MarineIMKKILGINSTVMNGIEKTTVTKITSKGVMLTGKKGKQSLTFPLKDAEKALDAGRWKVIDKKNI
Ga0208919_1002159123300025128MarineMKKILGINSVVMNGIEKTTVTKITSEGVTLTGKKGKQSLTFPLKDAEKALDKGTWKVIDK
Ga0208919_114233823300025128MarineMKKILGINSVVMNGSEKTTVTKITSKGVTLKGKKSLTFPLKDVEKQLQAGRWKVFDNE
Ga0208299_102984953300025133MarineMKVLGINSVVMNGIEKTKVTKITSKGVTLTGEKGKQSLTFPLEGVEKYLKKGIWKVINK
Ga0209756_112645713300025141MarineMKKILGINSVVMNGSEKTTVTKITSKGVTLTGKKGKQSLTFPLKDVEKQLQAGRWKVINN
Ga0207893_103256823300025241Deep OceanAKKILGINSTVMNGIEKTTVTKITSKGITLTGKKGEQSLTFPLKDAEAALKAGRWKVIDN
Ga0208182_1002086173300025251Deep OceanMKKILGINSVVMNGIEKTTVTKITSKNITLTGKKGEQSLTFPLKDAEAAIKAGRWKVVDN
Ga0208029_106560223300025264Deep OceanMAKFSLSEGKEMKKILGINSVVMNGIEKTTVTKITSKDITLTGKKGEQSLTFPLKDAEAAIKAGRWKVVDND
Ga0208180_100273923300025277Deep OceanMKKILGINSVVMNGIEKTTVTKITSKNITLTGKKGEQSLTFPLKDAEAALKAGRWKVIDN
Ga0208449_101707023300025280Deep OceanMDDMKSLKIGSQIMNGIEKTTVTNITPEGITLTGEKGKQFLTFPVKGVEHYLEKGIWKII
Ga0209757_1000517763300025873MarineMKILGINSTVMNGIEKTTVTKITSEGVTLTGKKGKQSLTFPLKDVEKALDTGKWKVIDV
Ga0209757_1008339713300025873MarineMKTLGINSTVMNGVEKTTVTKVTSKGVTLTGKSGSKSLTFPLKDAETYIKKGTWKVIKP
Ga0209757_1009573223300025873MarineMKILGINSIVMNGIEETKVTKITSKGITLTGKKGKQSLTFPLQDAENALKNGRWKVKKSVSS
Ga0209757_1014496133300025873MarineMKKILGINSVVMNGIEKTTVTKITSKDITLTGKKGEQSLTFPLKDAEAAIKAGRW
Ga0208451_102306613300026103Marine OceanicMEAKKILGINSTVMNGIEKTTVTKITSKGITLTGKKGEQSLTFPLKDAEAALKAGRWKVIDND
Ga0209554_118669813300027685MarineMSSMKSLKIGSQIMNGIEKTTVTNITPEGVTLTGKRGKQFLTFPVKGVEHYLEKGIWKIIKD
Ga0209554_119774723300027685MarineMRILGINSIVMNGIEKTKVTKITSKGVTLTGKKGKQSLTFPLEGVEKYLKSGKWKVINNE
Ga0209815_102615923300027714MarineMKVLGINSIVMNGIEKTKVTKITSKGVTLTGEKGKQSLTFPLEGVETYLKKGIWKVIT
Ga0209709_1007696613300027779MarineMKKLLGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDVEKALDTGKWKVIK
Ga0209709_1013804623300027779MarineMKKILGINSVVMNGIEKTTVTKITSKGVTLTGKKGEQSLTFPLKDAENALDAGRWKVIDK
Ga0209403_1044493823300027839MarineMKQLGINSTVMNGIEKTTVTKITAEGVTLTGIKGKQSLTFPLKDVEAALKAGRWKVADV
(restricted) Ga0233415_1001158063300027861SeawaterMKKVLGINSVVMNGIEKTKVTKITSKGVTLTGEKGKQSLAFPLEGVEKYLKSGHWKVIS
Ga0257122_109020923300028177MarineMEAKKILGINSTVMNGIEKTTVTKITSKGITLTGKKGEQSLIFPLKDAEAALKAGRWKVVDND
Ga0257107_103897213300028192MarineMKKILGINSVVMNGIEKTTVTKITSEGVTLTGKKGKQSLTFPLKDVEKALDTGKWKVIDV
Ga0256383_10319913300028448SeawaterMKKILGINSVVMNGIEKTTVTKITSEGVTLTDKKGKQSLTFPLKDAEKALDKGTWKVIDK
Ga0257115_116742313300028706MarineLGINSTVMNGIEKTTVTKITSKGITLTGKKGEQSLIFPLKDAEAALKAGRWKVVDND
Ga0307488_1054039313300031519Sackhole BrineMKNLGINSTVMNGIEKTTVTKITSEGVTLTGKKGKQSLTFPLKDVEKALDTGKWKVIDV
Ga0302132_1001715343300031605MarineMKKILGINSVVMNGIEKTTVTKITSKGVTLTGKKGKQSLMFPLKDVENALEAGRWKVIDK
Ga0302132_1011995653300031605MarineMKKILGINSVVMNGIEKTTVTKITAKGITLTGKKGEQSLTFPLKDAEAAIQAGRWKVVD
Ga0302132_1022035223300031605MarineMKILGINSVVMNGIEKTKVTKITSKGVTLTGEKGKQSLTFPLGGVETYLKNGTWKVIPSA
Ga0302119_1003215553300031606MarineMKILGINSVVDILGRKNTVTKITSKGVTLTGEKGKQSLTFPLKDVETAIKAGRWKVKKSELSS
Ga0302119_1008352923300031606MarineMKILGINSIVMNGIEETKVTKITSKGITLTGKKGKQSLTFPLKDVEAAIKTGRWKVKKSVSS
Ga0302119_1013597023300031606MarineMKKILGINSVVMNGIEKTTVTKITAKGITLTGKKGEQSLTFPLKDAEAAIQAGRWKVVDN
Ga0302119_1028418113300031606MarineGLNSTIMNGIEKTTVTKITSKGITLTGKKGEQSLTFPLKDAEKALKAGRWKILEKS
Ga0302118_1023409723300031627MarineMAKVSLSEGKEMKKILGINSVVMNGIEKTTVTKITAKGITLTGKKGEQSLTFPLKDAEAAIQAGRWKVVDND
Ga0302118_1049309313300031627MarineMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDAEKALDTGKWKVIDK
Ga0302122_1026304923300031675MarineMKQLGINSTVMNGIEKTTVTKITSKGVTLTGKKGEQSLTFPLKDAENALDAGRWKVIDK
Ga0302120_1003556723300031701MarineMKILGLNSTIMNGIEKTTVTKITSKGITLTGKKGEQSLTFPLKDAEKALKAGRWKILEKS
Ga0302120_1009738723300031701MarineMAKVSLSEGKEMKKILGINSVVMNGIEKTTVTKITSKGVTLTGKKGEQSLTFPLKDAEAAIKAGRWKVVDND
Ga0315326_1043157313300031775SeawaterMAKFSLSEGKEMEAKKILGINSTVMNGIEKTTVTKITSKGITLTGKKGEQSLTFPLKDAEAALKAGRWKVVDND
Ga0315316_1039713333300032011SeawaterMKKVLGINSVVMNGIEKTKVTKITSKGVTLTGEKGKQSLTFPLEGVEKYLKSGHWKVIS
Ga0315327_1081427523300032032SeawaterMKVLGINSVVMNGIEKTKVTKITSKGVTLTGEKGKQSLTFPLEGVEKYLKSGHWKVIS
Ga0315329_1013410423300032048SeawaterMKKILGINSTVMNGIEKTTVTKITSKGVTLTGKKGKQSLTFPLKDAEKALDTGKWKVVDKKNT
Ga0315334_1025619033300032360SeawaterMKILGINSTVMNGVEKTTVTKVTSKGVTLTGKSGSKSLTFPLKDAETYIKKGTWKVIKP
Ga0315334_1032564723300032360SeawaterMKVLGINSVVMNGIEKTKVTKITSKGVTLTGKKGKQSLTFPLEGVEKYLKSGKWKVIKNG
Ga0315334_1104466913300032360SeawaterMKVLGINSVVMNGIEKTKVTKITSKGVTLTGEKGKQSLTFPLEGVETYLKKGIWKVINNE


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