NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F096067

Metagenome Family F096067

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096067
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 79 residues
Representative Sequence MSEDINVQIYINKKEIMYSHQNIVSVINTFLPYLTNPDLDELNDRCKSLLEHRHQQEQQSQLEENRTPILSNRHDT
Number of Associated Samples 68
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 45.19 %
% of genes near scaffold ends (potentially truncated) 22.86 %
% of genes from short scaffolds (< 2000 bps) 76.19 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction Yes
3D model pTM-score0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (73.333 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(43.809 % of family members)
Environment Ontology (ENVO) Unclassified
(90.476 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(63.810 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.35%    β-sheet: 7.69%    Coil/Unstructured: 50.96%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF02511Thy1 16.19
PF09723Zn-ribbon_8 13.33
PF00149Metallophos 8.57
PF137592OG-FeII_Oxy_5 4.76
PF00462Glutaredoxin 4.76
PF00154RecA 1.90
PF04542Sigma70_r2 1.90
PF11056UvsY 0.95
PF01230HIT 0.95
PF04055Radical_SAM 0.95
PF00463ICL 0.95
PF04851ResIII 0.95
PF01165Ribosomal_S21 0.95
PF00497SBP_bac_3 0.95
PF00478IMPDH 0.95
PF03796DnaB_C 0.95
PF04820Trp_halogenase 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 16.19
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 1.90
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 1.90
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 1.90
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 1.90
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 1.90
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 0.95
COG0828Ribosomal protein S21Translation, ribosomal structure and biogenesis [J] 0.95
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 0.95
COG2224Isocitrate lyaseEnergy production and conversion [C] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A73.33 %
All OrganismsrootAll Organisms26.67 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000153|SI39nov09_135mDRAFT_c1023944All Organisms → Viruses → Predicted Viral1107Open in IMG/M
3300000172|SI34jun09_200mDRAFT_c1027345All Organisms → Viruses → Predicted Viral1243Open in IMG/M
3300000239|SI36aug09_120mDRAFT_1072783Not Available595Open in IMG/M
3300001450|JGI24006J15134_10019901All Organisms → Viruses → Predicted Viral3104Open in IMG/M
3300003495|JGI26244J51143_1034363Not Available949Open in IMG/M
3300003619|JGI26380J51729_10022656All Organisms → cellular organisms → Bacteria1895Open in IMG/M
3300004273|Ga0066608_1111417Not Available691Open in IMG/M
3300005838|Ga0008649_10158648Not Available898Open in IMG/M
3300006093|Ga0082019_1008603Not Available2051Open in IMG/M
3300006164|Ga0075441_10068703Not Available1382Open in IMG/M
3300006190|Ga0075446_10074130Not Available1021Open in IMG/M
3300006191|Ga0075447_10190339Not Available678Open in IMG/M
3300006900|Ga0066376_10439121Not Available742Open in IMG/M
3300006900|Ga0066376_10755109Not Available530Open in IMG/M
3300006926|Ga0098057_1002645Not Available5141Open in IMG/M
3300006947|Ga0075444_10103004Not Available1247Open in IMG/M
3300009172|Ga0114995_10043057All Organisms → Viruses → Predicted Viral2600Open in IMG/M
3300009173|Ga0114996_10418701Not Available1024Open in IMG/M
3300009173|Ga0114996_10882175Not Available642Open in IMG/M
3300009409|Ga0114993_10306653Not Available1207Open in IMG/M
3300009420|Ga0114994_10005005Not Available9648Open in IMG/M
3300009420|Ga0114994_10014210Not Available5635Open in IMG/M
3300009420|Ga0114994_10296388Not Available1078Open in IMG/M
3300009420|Ga0114994_10484724All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon815Open in IMG/M
3300009420|Ga0114994_10742760Not Available639Open in IMG/M
3300009422|Ga0114998_10233361Not Available869Open in IMG/M
3300009422|Ga0114998_10235264Not Available865Open in IMG/M
3300009422|Ga0114998_10370743Not Available669Open in IMG/M
3300009425|Ga0114997_10020694Not Available4489Open in IMG/M
3300009425|Ga0114997_10106157All Organisms → Viruses → Predicted Viral1708Open in IMG/M
3300009432|Ga0115005_10436643Not Available1040Open in IMG/M
3300009432|Ga0115005_11087604Not Available649Open in IMG/M
3300009441|Ga0115007_11116764Not Available546Open in IMG/M
3300009512|Ga0115003_10297851Not Available956Open in IMG/M
3300009705|Ga0115000_10786520Not Available585Open in IMG/M
3300009705|Ga0115000_11002139Not Available509Open in IMG/M
3300009706|Ga0115002_10732344Not Available696Open in IMG/M
3300010883|Ga0133547_11924991All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1087Open in IMG/M
3300020309|Ga0211681_1028583Not Available955Open in IMG/M
3300020372|Ga0211683_10066513Not Available1175Open in IMG/M
3300020372|Ga0211683_10295058Not Available503Open in IMG/M
3300020376|Ga0211682_10172744Not Available847Open in IMG/M
(restricted) 3300022888|Ga0233428_1004348Not Available11114Open in IMG/M
(restricted) 3300022888|Ga0233428_1006804Not Available7653Open in IMG/M
(restricted) 3300022888|Ga0233428_1013662All Organisms → cellular organisms → Bacteria → Proteobacteria4391Open in IMG/M
(restricted) 3300022888|Ga0233428_1018177All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae3538Open in IMG/M
(restricted) 3300022888|Ga0233428_1039073Not Available2050Open in IMG/M
(restricted) 3300024255|Ga0233438_10138806Not Available1057Open in IMG/M
(restricted) 3300024256|Ga0233446_1074056Not Available1066Open in IMG/M
(restricted) 3300024259|Ga0233437_1111728Not Available1334Open in IMG/M
(restricted) 3300024264|Ga0233444_10466865Not Available509Open in IMG/M
(restricted) 3300024336|Ga0233447_1084343Not Available963Open in IMG/M
3300024346|Ga0244775_11077173Not Available631Open in IMG/M
3300025072|Ga0208920_1002929Not Available4145Open in IMG/M
3300025114|Ga0208433_1013037Not Available2435Open in IMG/M
3300025138|Ga0209634_1025481All Organisms → Viruses → Predicted Viral3214Open in IMG/M
3300025138|Ga0209634_1084471All Organisms → Viruses1448Open in IMG/M
3300025138|Ga0209634_1170994All Organisms → Viruses863Open in IMG/M
3300025644|Ga0209042_1005516All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae6642Open in IMG/M
3300025676|Ga0209657_1042661Not Available1681Open in IMG/M
3300025707|Ga0209667_1173750Not Available621Open in IMG/M
3300026253|Ga0208879_1269075Not Available631Open in IMG/M
3300027522|Ga0209384_1135754Not Available551Open in IMG/M
3300027704|Ga0209816_1113627Not Available1030Open in IMG/M
3300027752|Ga0209192_10025691All Organisms → cellular organisms → Bacteria2864Open in IMG/M
3300027752|Ga0209192_10109553Not Available1131Open in IMG/M
3300027779|Ga0209709_10000120Not Available71706Open in IMG/M
3300027779|Ga0209709_10014064Not Available5551Open in IMG/M
3300027779|Ga0209709_10122444All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Emdodecavirus → Sinorhizobium virus M121322Open in IMG/M
3300027779|Ga0209709_10141671Not Available1192Open in IMG/M
3300027791|Ga0209830_10137153All Organisms → Viruses → Predicted Viral1183Open in IMG/M
3300027801|Ga0209091_10214842Not Available952Open in IMG/M
3300027801|Ga0209091_10238014Not Available890Open in IMG/M
3300027801|Ga0209091_10411592Not Available610Open in IMG/M
3300027810|Ga0209302_10206512Not Available938Open in IMG/M
3300027813|Ga0209090_10558946Not Available524Open in IMG/M
3300031141|Ga0308021_10050955All Organisms → Viruses → Predicted Viral1721Open in IMG/M
3300031142|Ga0308022_1017401All Organisms → cellular organisms → Bacteria2336Open in IMG/M
3300031142|Ga0308022_1083238Not Available967Open in IMG/M
3300031143|Ga0308025_1057046All Organisms → Viruses → Predicted Viral1492Open in IMG/M
3300031143|Ga0308025_1316082Not Available501Open in IMG/M
3300031510|Ga0308010_1060460All Organisms → Viruses → Predicted Viral1532Open in IMG/M
3300031519|Ga0307488_10427137Not Available812Open in IMG/M
3300031598|Ga0308019_10009209All Organisms → Viruses → Predicted Viral4835Open in IMG/M
3300031598|Ga0308019_10094914All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon1221Open in IMG/M
3300031598|Ga0308019_10190917Not Available797Open in IMG/M
3300031603|Ga0307989_1005528Not Available4575Open in IMG/M
3300031603|Ga0307989_1033979All Organisms → Viruses1097Open in IMG/M
3300031629|Ga0307985_10004001Not Available8029Open in IMG/M
3300031630|Ga0308004_10078576All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Emdodecavirus → Sinorhizobium virus M121424Open in IMG/M
3300031659|Ga0307986_10021122All Organisms → Viruses → Predicted Viral3739Open in IMG/M
3300031659|Ga0307986_10072929All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1724Open in IMG/M
3300031659|Ga0307986_10156175All Organisms → Viruses → Predicted Viral1055Open in IMG/M
3300031659|Ga0307986_10211945Not Available859Open in IMG/M
3300031659|Ga0307986_10330008Not Available630Open in IMG/M
3300031659|Ga0307986_10331418Not Available628Open in IMG/M
3300031689|Ga0308017_1113174Not Available553Open in IMG/M
3300031696|Ga0307995_1142507Not Available896Open in IMG/M
3300031696|Ga0307995_1146402Not Available880Open in IMG/M
3300031721|Ga0308013_10046820Not Available1784Open in IMG/M
3300031775|Ga0315326_10524569Not Available759Open in IMG/M
3300032011|Ga0315316_10287595Not Available1377Open in IMG/M
3300033742|Ga0314858_078698Not Available825Open in IMG/M
3300033742|Ga0314858_173492Not Available554Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine43.81%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine21.90%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine10.48%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater9.52%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine8.57%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine1.90%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.90%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.95%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.95%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000153Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 135mEnvironmentalOpen in IMG/M
3300000172Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 200mEnvironmentalOpen in IMG/M
3300000239Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 36 08/11/09 120mEnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300003495Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_150m_DNAEnvironmentalOpen in IMG/M
3300003619Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNAEnvironmentalOpen in IMG/M
3300004273Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_135mEnvironmentalOpen in IMG/M
3300005838Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_130m_DNAEnvironmentalOpen in IMG/M
3300006093Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP189EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009432Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M MetagenomeEnvironmentalOpen in IMG/M
3300009441Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M MetagenomeEnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300020309Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX556064-ERR599104)EnvironmentalOpen in IMG/M
3300020372Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)EnvironmentalOpen in IMG/M
3300020376Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)EnvironmentalOpen in IMG/M
3300022888 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_120_MGEnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300024256 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_120_MGEnvironmentalOpen in IMG/M
3300024259 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MGEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300024336 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_135_MGEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025644Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_200m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025676Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025707Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_165m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300026253Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A (SPAdes)EnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027704Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027752Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027801Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)EnvironmentalOpen in IMG/M
3300027810Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300031141Marine microbial communities from water near the shore, Antarctic Ocean - #351EnvironmentalOpen in IMG/M
3300031142Marine microbial communities from water near the shore, Antarctic Ocean - #353EnvironmentalOpen in IMG/M
3300031143Marine microbial communities from water near the shore, Antarctic Ocean - #422EnvironmentalOpen in IMG/M
3300031510Marine microbial communities from water near the shore, Antarctic Ocean - #129EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031598Marine microbial communities from water near the shore, Antarctic Ocean - #284EnvironmentalOpen in IMG/M
3300031603Marine microbial communities from Ellis Fjord, Antarctic Ocean - #185EnvironmentalOpen in IMG/M
3300031629Marine microbial communities from Ellis Fjord, Antarctic Ocean - #80EnvironmentalOpen in IMG/M
3300031630Marine microbial communities from water near the shore, Antarctic Ocean - #38EnvironmentalOpen in IMG/M
3300031659Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82EnvironmentalOpen in IMG/M
3300031689Marine microbial communities from water near the shore, Antarctic Ocean - #280EnvironmentalOpen in IMG/M
3300031696Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262EnvironmentalOpen in IMG/M
3300031721Marine microbial communities from water near the shore, Antarctic Ocean - #181EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SI39nov09_135mDRAFT_102394423300000153MarineMEIFGKTKMDGSMKVDDEIICESKLQVQIYIDKKEVTYSRRNMIKTINTFLLFLTNQDLDELNDRCKSLKEHRHQQEQQSIIDCQNIPIQSNRHDT*
SI34jun09_200mDRAFT_102734523300000172MarineMKVNDENINIQIYINKKEVVYSRQNMIKAINTFLLYLTNPDLDELTDRCKSLKEHRHQQEQQSIIDCQNIPIQSNRHDT*
SI36aug09_120mDRAFT_107278313300000239MarineDDEIICESKLQVQIYIDKKEVTYSRRNMIKTINTFLLFLTNQDLDELNDRCKSLKEHRHQQEQQSIIDCQNIPIQSNRHDT*
JGI24006J15134_1001990193300001450MarineMSEDIHVQIYINKKEILYSHQNIVSVIHTFLPYLTNPDLDELNDKCKSLKEHRHQREQQAKLDAKNFSIQSNRHDT*
JGI26244J51143_103436323300003495MarineMKVNDENINIQIYINKKEVTYSRQNLIAVINAFLPYLTNPDLDELNDRCKSLKEHRLQQEQQSIIDCQNIPIQSNRHDT*
JGI26380J51729_1002265613300003619MarineMEIFGKTKMDGSMKVDDEIICESKLQVQIYIDKKEVTYSRRNMIXTINTFLLFLTNQDLDELNDRCKSLKEHRHQQEQQSIIDCQNIPIQSNRHDT*
Ga0066608_111141723300004273MarineMKVNDENINIQIYINKKEVTYSRQNLIKAINTFLLYLTNPDLDELTDRCKSLKEHRHQQEQQSIIDCQNIPIQSNRHDT*
Ga0008649_1015864813300005838MarineMSEEINVQIYINKKEVPYSRQNMIKAINTFLPYLTNQDIGKLNDRIFALKDHRIQQEQQSIIDCQNIPIQSNRHDT*
Ga0082019_100860363300006093MarineMSEGKIQIFINKKEMLYSHSNIIQAINGLLPYLTGTDLDELKDRCGSLREHRRQKEHLSRLEAKNIPIQSNRYDT*
Ga0075441_1006870323300006164MarineMSEDINVQIYINKKEIMYSHQNIVSVINTFLPYLTNPDLDELNDRCKSLKVHRHQQEQQSKLDAKNLSIQSNRHDT*
Ga0075446_1007413023300006190MarineMSEDINIQIYINKKEVMYTRQNMIRTINTFLLYLTNPDLDELNDRCKTLKEHRHQKEQQAKLDSKNMPIQSNRYDTPAKLL*
Ga0075447_1019033913300006191MarineMVFFFNLILCEVIMSKNVQIYINKKEMAYSRQNLIAAINSFLPYLTNPDLDNLFDRCTTLKEHRHQQEQQSRLEAKNLPHHIRHDT*
Ga0066376_1043912123300006900MarineMSEDINIQIYINKKEVVYTRQNMIRTINTFLLYLTNPDLDELNDRCKTLKEHRHQKEQQAKLDSKNMPIQSNRYDTPAKLL*
Ga0066376_1075510913300006900MarineMYGKSAVGIEKNNIQIYINKKEVAYSRQNMIRAINTFLLYLTNPDLDELSDRCASLKEHRHQQEQQAQKEENRTPILSNRYDTN*
Ga0098057_100264583300006926MarineMSEGKIQIFINKKEMLYSHSNIIQAINGLLPYLTGTDLDELKDRCGSLREHRRQKEHLSRLEAKNIPIQNNRHDT*
Ga0075444_1010300423300006947MarineKEILYSHQNIVAVVNTFLPYLTNPDLDELNDRCKSLIEHRHQQEQQSKLEENRTPIQSNRYDT*
Ga0114995_1004305723300009172MarineMSEDINVQIYINKKEIMYSHQNIVSVIHTFLPYLTNPDLDELNDKCKSLIEHRHEQEQQSKLESKNIPIQSNRHDT*
Ga0114996_1041870123300009173MarineMKNNIQIYINKKEVVYTRQNMIRAINTFLLYLTNPDLDELSDRCASLKEHRHQQEQQAQEEENRTPILSNRYDTN*
Ga0114996_1088217533300009173MarineMSEDIHVQIYINKKEILYSHQNIVSVINTFLPYLTNPDLDELNDKCKSLKEHRHQQEQKSRLEAKNIPIQSNRHDT*
Ga0114993_1030665333300009409MarineMSEDINVQIYINKKEIMYSHQNIVSVINTFLPYLTNPDLDELNDKCKSLKEHRHQQEQKSRLEAKNIPIQSNRHDT*
Ga0114994_10005005123300009420MarineMKEKDNNIQIFINKKEMLYSRQNMITAINTFLLYFTNSDLDELNDRCKSLKEHRHQQEQQANLEENRTPILSNRWDT*
Ga0114994_10014210103300009420MarineMSEDINVQIYINKKEILYSHQNIVSVINTFLPYLTNPDLDELRNTCDTLLEHRHQQEKLSIEERKHIPIQSNRHDT*
Ga0114994_1029638823300009420MarineMKKNDEDINVQIYINKKEISYSHQNIVAVINTFLPYLTNPDLDELNDKCKSLIEHRHQQEQQSKLEENRTPIQSNRYDT*
Ga0114994_1048472413300009420MarineVGIEKNNIQIYINKKEVAYSRQNMIRAINTFLLYLTNPDLDELNDRCASLKEHRHQQEQQAQKEENRTPILSNRYDTN*
Ga0114994_1074276023300009420MarineMTEQQSEKNNVQIYINKKEMNYSRQNMVRAINTFLLYLTNADLDELNDRCVSLKEHRHQQEQLTKLEENRTPIVSNRYDTP
Ga0114998_1023336123300009422MarineMSEDINVQIYINKKEIMYSHQNIVSVIHTFLPYLTNPDLDELNDKCKSLIEHRHEQEQQSKLEAKNIPIQSNRHDT*
Ga0114998_1023526433300009422MarineMKNNIQIYINKKEVAYSRQNMIRAINTFLLYLTNPDLDELNDRCASLKEHRHQQEQQAQKEENRTPILSNRYDTN*
Ga0114998_1037074313300009422MarineMTENTTQIYINKKELPYSRQNMISVINSFLPYLTNPDLDELNDRCASLKEHRHQQEQQAQKEENRTPILSNRYDTN*
Ga0114997_1002069463300009425MarineLELWAHDRYNLCLDTVIMKEKDNNIQIFINKKEMLYSRQNMITAINTFLLYFTNSDLDELNDRCKSLKEHRHQQEQQANLEENRTPILSNRWDT*
Ga0114997_1010615733300009425MarineMSEDINVQIYINKKEISYSHQNIVSVINTFLPYLTNPDLDELKNTCDTLLEHRHQQEKLSIEERKHIPIQSNRHDT*
Ga0115005_1043664333300009432MarineMTENTTQIYINKKELPYSRPNMISVINSFLPYLTNPDLDKLNDRCVALKEHRHEQEQQSKLEAKNIPIQSNRHDT*
Ga0115005_1108760413300009432MarineELPYSRQNMISVINSFLPYLTNPDLDELNDRCASLKEHRHQQEQQAQKEENRTPILSNRYDTN*
Ga0115007_1037435633300009441MarineMSEDINIQIYINKKEVAYSRQNMIRAINTFLLYLTNPDLDELNDRCKALKEHRRQQEQLTKLEKNRTPILSNRYDTPILEHDQTWGNEYEQ*
Ga0115007_1111676423300009441MarineMKANTVQIYINKKELPYSRPNMISVINSFLPYLTNPDLDELNDRCASLKEHRHQQEQQAQKEENRTPILSNRYDTN*
Ga0115003_1029785123300009512MarineMSEDIHVQIYINKKEIMYSHQNIVSVIHTFLPYLTNPDLDELNDKCKSLIEHRHEQEQQSKLESKNIPIQSNRHDT*
Ga0115000_1078652023300009705MarineMTENTVQIYINKKELPYSRQNMISVINNFLPYLTNPDLDKLNDRCVALKEHRQKKEQQAQKEENRTPILSNRYDTN*
Ga0115000_1100213913300009705MarineMYGKSAVGIEKNNIQIYINKKEVAYSRQNMIRAINTFLLYLTNPDLDELNDRCASLKEHRHQQEQQAQKEENRTPILSNRYDTN*
Ga0115002_1073234413300009706MarineIQIYINKKEVVYTRQNMIRAINTFLLYLTNADLDELNDRCTSLKEHRHQQEQLTKLEKNRTPILSNRYDTPVLEHDQTWGNEYE*
Ga0133547_1192499143300010883MarineMTENTVQIYINKKELPYSRQNMISAINSFLPYLTNPDLDELNDRCASLKEHRHQQEQQAQKEENRTPILSNRYDTN*
Ga0211681_102858323300020309MarineMSEDINIQIYINKKEVMYTRQNMIRTINTFLLYLTNPDLDELNDRCKTLKEHRHQKEQQAKLDSKNMPIQSNRYDTPAKLL
Ga0211683_1006651323300020372MarineMSEDINVQIYINKKEIMYSHQNIVSVINTFLPYLTNPDLDELNDRCKSLKVHRHQQEQQSKLDAKNLSIQSNRHDT
Ga0211683_1029505823300020372MarineMKKKDEDINVQIYINKKEILYSHQNIVAVVNTFLPYLTNPDLDELNDRCKSLIEHRHQQEQQYKLEAKNIPIQSNRHDT
Ga0211682_1017274423300020376MarineMKKNDEDINVQIYINKKEISYSHQNIVAVINTFLPYLTNPDLDELNDRCKSLLEHRHQQEEQSKLEENRTPIQSNRYDT
(restricted) Ga0233428_100434873300022888SeawaterMKETDNKIQIFINKKELSYSRQNMIKAINTFLLYLTNSDLDELNDRCKSLKEHRHQQEQQANLEENRTPILSNRWDT
(restricted) Ga0233428_100680413300022888SeawaterMKVNDENINIQIYINKKEVVYSRQNMIKAINTFLLYLTNPDLDELNDRCKSLKEHRLQQEQQSIIDCQNIPIQSNRHDT
(restricted) Ga0233428_101366283300022888SeawaterMEIFGKTKMDGSMKVDDEIICESKLQVQIYIDKKEVTYSRRNMIKTINTFLLFLTNQDLDELNDRCKSLKEHRHQQEQQSIIDCQNIPIQSNRHDT
(restricted) Ga0233428_101817753300022888SeawaterMKVNDENINIQIYINKKEVTYSRQNLIAVINAFLPYLTNPDLDELNDRCKSLKEHRLQQEQQSIIDCQNIPIQSNRHDT
(restricted) Ga0233428_103907353300022888SeawaterMSEEINVQIYINKKEVPYSRQNMIKAINTFLPYLTNQDIGKLNDRIFALKDHRIQQEQQSIIDCQNIPIQSNRHDT
(restricted) Ga0233438_1013880623300024255SeawaterMSEDINVQIYINKKEIMYSHQNIVSVINTFLPYLTNPDLDELNDRCKSLLEHRHQQEQQSQLEENRTPILSNRHDT
(restricted) Ga0233446_107405633300024256SeawaterMEIFGKTKMDGSMKVDDEIICESKLQVQIYIDKKEVTYSRRNMIKTINTFLLFLTNQDLDELNDRCKSLKEHRLQQEQQSIIDCQNIPIQSNRHDT
(restricted) Ga0233437_111172823300024259SeawaterMKVNDENINIQIYINKKEVVYSRQNMIKAINTFLLYLTNPDLDELTDRCKSLKEHRHQQEQQSIIDCQNIPIQSNRHDT
(restricted) Ga0233444_1046686513300024264SeawaterNMSEDINVQIYINKKEIMYSHQNIVSVINTFLPYLTNPDLDELNDRCKSLLEHRHQQEQQSQLEENRTPILSNRHDT
(restricted) Ga0233447_108434313300024336SeawaterKEVTYSRRNMIKTINTFLLFLTNQDLDELNDRCKSLKEHRHQQEQQSIIDCQNIPIQSNRHDT
Ga0244775_1107717333300024346EstuarineYINKKEILYSHQNIVSVINTFLPYLTNPDLDELNDKCKSLKEHRHQQEQKSRLEAKNIPIQSNRHDT
Ga0208920_100292973300025072MarineMSEGKIQIFINKKEMLYSHSNIIQAINGLLPYLTGTDLDELKDRCGSLREHRRQKEHLSRLEAKNIPIQSNRYDT
Ga0208433_101303723300025114MarineMSEGKIQIFINKKEMLYSHSNIIQAINGLLPYLTGTDLDELKDRCGSLREHRRQKEHLSRLEAKNIPIQNNRHDT
Ga0209634_102548123300025138MarineMSEDIHVQIYINKKEILYSHQNIVSVIHTFLPYLTNPDLDELNDKCKSLKEHRHQREQQAKLDAKNFSIQSNRHDT
Ga0209634_108447123300025138MarineMKKNDEDINVQIYINKKEILYSHQNIVAVINTFLPYLTNLDLDELNDRCKSLIEHRNQQEQQSKLEAKNIPIQSNRHDT
Ga0209634_117099423300025138MarineMSKDTNIQIYVNKKEVVYTRKNMIKTINTFLLYLTNPDLDELNDRCKSLKEHRHQQEQESQLEENRTPIQSNRYDT
Ga0209042_100551643300025644MarineMKVNDENINIQIYINKKEVTYSRQNLIKAINTFLLYLTNPDLDELNDRCKSLKEHRLQQEQQSIIDCQNIPIQSNRHDT
Ga0209657_104266113300025676MarineMSEEINVQIYINKKEVPYSRQNMIKAINTFLPYLTNQDIGKLNDRIFALKDHRIQQEQQSIIDCQNIPIQNNRHDT
Ga0209667_117375023300025707MarineMKVNDENINIQIYINKKEVTYSRQNLIKAINTFLLYLTNPDLDELTDRCKSLKEHRHQQEQQSIIDCQNIPIQSNRHDT
Ga0208879_126907513300026253MarineKENMSEDINVQIYINKKEIMYSHQNIVSVINTFLPYLTNPDLDELNDRCKSLKVHRHQQEQQSKLDAKNLSIQSNRHDT
Ga0209384_113575423300027522MarineMSEDINIQIYINKKEVVYTRQNMIRTINTFLLYLTNPDLDELNDRCKTLKEHRHQKEQQAKLDSKNMPIQSNRYDTPAKLL
Ga0209816_111362723300027704MarineVQIYINKKEILYSHQNIVAVVNTFLPYLTNPDLDELNDRCKSLIEHRHQQEQQSKLEENRTPIQSNRYDT
Ga0209192_1002569163300027752MarineMSEDINVQIYINKKEIMYSHQNIVSVIHTFLPYLTNPDLDELNDKCKSLIEHRHEQEQQSKLESKNIPIQSNRHDT
Ga0209192_1010955333300027752MarineMTENTTQIYINKKELPYSRQNMISVINSFLPYLTNPDLDELNDRCASLKEHRHQQEQQAQKEENRTPILSNRYDTN
Ga0209709_10000120443300027779MarineMKEKDNNIQIFINKKEMLYSRQNMITAINTFLLYFTNSDLDELNDRCKSLKEHRHQQEQQANLEENRTPILSNRWDT
Ga0209709_1001406433300027779MarineMSEDINVQIYINKKEISYSHQNIVSVINTFLPYLTNPDLDELKNTCDTLLEHRHQQEKLSIEERKHIPIQSNRHDT
Ga0209709_1012244423300027779MarineMKKNDEDINVQIYINKKEISYSHQNIVAVINTFLPYLTNPDLDELNDRCKSLLEHRHQQEEQSKLEENRTPILSNRYDT
Ga0209709_1014167123300027779MarineMSEDINVQIYINKKEIMYSHQNIVSVINTFLPYLTNPDLDELNDKCKSLKEHRHQQEQKSRLEAKNIPIQSNRHDT
Ga0209830_1013715333300027791MarineMSEDINVQIYINKKEIMYSHQNIVSVIHTFLPYLTNPDLDELNDKCKSLIEHRHEQEQQSKLEAKNIPIQSNRHDT
Ga0209091_1021484213300027801MarineVGIEKNNIQIYINKKEVAYSRQNMIRAINTFLLYLTNPDLDELNDRCASLKEHRHQQEQQAQKEENRTPIL
Ga0209091_1023801433300027801MarineMSEDINVQIYINKKEILYSHQNIVSVINTFLPYLTNPDLDELRNTCDTLLEHRHQQEKLSIEERKHIPIQSNRHDT
Ga0209091_1041159233300027801MarineNVQIYINKKEIMYSHQNIVSVINTFLPYLTNPDLDELNDKCKSLKEHRHQQEQKSRLEAKNIPIQSNRHDT
Ga0209302_1020651233300027810MarineMKANTVQIYINKKELPYSRPNMISVINSFLPYLTNPDLDELNDRCASLKEHRHQQEQQAQKEENRTPILSNRYDTN
Ga0209090_1055894623300027813MarineMKKNDEDINVQIYINKKEISYSHQNIVAVINTFLPYLTNPDLDELNDKCKSLIEHRHQQEQQSKLEENRTPIQSNRYDT
Ga0308021_1005095543300031141MarineMSKNVQIYINKKEMAYSRQNLIAAINSFLPYLTNPDLDNLFDRCTTLKEHRHQQEQQSRLEAKNLPHHIRHDT
Ga0308022_101740123300031142MarineMSKDTNIQIYVNKKEVVYTRKNMIKTINTFLLYLTNPDLDELNDRCKSLKEHRHQQEQQSQLEENRTPILSNRYDT
Ga0308022_108323813300031142MarineKYKDTSMVFFFNLILCEVIMSKNVQIYINKKEMAYSRQNLIAAINSFLPYLTNPDLDNLFDRCTTLKEHRHQQEQQSRLEAKNLPHHIRHDT
Ga0308025_105704663300031143MarineMVFFFNLILCEVIMSKNVQIYINKKEMAYSRQNLIAAINSFLPYLTNPDLDNLFDRCTTLKEHRHQQEQQSRLEAKNLPHHIRHDT
Ga0308025_131608233300031143MarineEILYSHQNIVTTINAFLPYLTNPDLDELNNRCKSLKEHRHQQEQQSKLEAKNIPIQSNRHDT
Ga0308010_106046043300031510MarineMKEKDNNIQIFINKKEMSYSRQNMITAINAFLFYLTNSDLDELNDRCKSLKEHRHQQEQQANLEENRTPILSNRWDT
Ga0307488_1042713733300031519Sackhole BrineGIEKNNIQIYINKKEVAYSRQNMIRAINTFLLYLTNPDLDELNDRCASLKEHRHQQEQQAQKEENRTPILSNRYDTN
Ga0308019_10009209133300031598MarineMTVTTDEVKIYINNKEILYSHQNIVTTINAFLPYLTNPDLDELNNRCKSLKEHRHQQEQQSKLEAKNIPIQSNRHDT
Ga0308019_1009491423300031598MarineMSEDISVQIYINKKEILYSHQNIVAVINTFLPYLTNPDLDELDDRCKTLIEHRHQQEQQSQLEENRTPILSNRYDT
Ga0308019_1019091723300031598MarineMSEDINIQIYINKKEVVYTRQNMIRAINTFLLYLTNPDLDELSDRCASLKEHRHQQEQQAKEEENRTPILSNRYDTN
Ga0307989_1005528103300031603MarineMEIFGKTKMDGSMKVDDEIICESKLQVQIYINKKEVVYSRRNMKKTINTFLLYLTNSDLDELNDRCKSLKEHRHQQEQQAKLDAKNMPIQSNRHDT
Ga0307989_103397923300031603MarineMKVNDENIKIQIYIDKKEVVYSRQNMIKAINTFLLYLTNPDLDELTDRCKSLKEHRHQQEQQAKLEENRTPIQSNRYDT
Ga0307985_10004001113300031629MarineMESDFIKIYINKKEMTYSRQNMIKAINTFLLYLTNPDLDELNDRCKSLKEHRHQQEQQSKLEENRTPIQSNRYDT
Ga0308004_1007857623300031630MarineMKKNDEDINVQIYINKKEILYSHQNIVAVVNTFLPYLTNPDLDELNDRCKSLIEHRHQQEQQSKLEENRTPIQSNRYDT
Ga0307986_10021122103300031659MarineVTLKLSPLFDEFIKKSMKVDDNNICESKLQVQIYINKKEVVYSRQNMIKTINTFLLYLSNSDIEELNDRCKSLKEHRLQQEQQAKLEAKNMPIQSNRHDT
Ga0307986_1007292923300031659MarineMKVDDEKVCASKLQIQIYIDKKEVVYSRQNMKKTINTFLLYLTNSDLDELNDRCKSLKEHRHQQEQQAKLEAKNMPIQSNRHDT
Ga0307986_1015617533300031659MarineMSKNVQIYINKKEMAYSRQNLIAAINSFLPYLTNPDLDNLFDRCTTLKEHRHQQEQQSRLEAKNLPHH
Ga0307986_1021194523300031659MarineMEIFGKTKMDGSMKVDVEIICESKLQVQIYINKKEVVYSRRNMKKTINTFLLYLTNSDLDELNDRCKSLKEHRHQQEQQAKLDAKNMPIQSNRHDT
Ga0307986_1033000823300031659MarineMELFGKTEMDGSMKVDDEKVCESKLQVQIYINKKEVVYSRRNMKKTINTFLLFLTNSDLDELNDRCKSLKEHRHQQEQQSIIDCQNIPIQSNRHDA
Ga0307986_1033141823300031659MarineMELFGKTEMDDSMKVDDETICESKLQVQIYIDKKEVVYSRRNMKKTINTFLLYLTNPDLDELVDRCKSLKEHRHQQEQQAKLDAKNMPIQSNRHDT
Ga0308017_111317413300031689MarineMSKDINIQIYVNKKEVVYTRKNMIKTINTFLLYLTNPDLDELNDRCKSLKEHRHQQEQQSQLEENRTPILSNRY
Ga0307995_114250723300031696MarineMELFGKTEMDGSMKVDDEKVCESKLQVQIYINKKEVVYSRRNMKKTINTFLLFLTNSDLDELNDRCKSLKEHRHQQEQQSIIDCQNIPIQSNRHDT
Ga0307995_114640213300031696MarineFYGSMKVDDEKVCASKLQVQIYIDKKEVVYSRQNMIKAINTFLLYLTNPDLDELNDRCKSLKEHRHQQEQQAKLEAKNMPIQSNRHDT
Ga0308013_1004682013300031721MarineNMSEDINVQIYINKKEIMYSHQNIVSVINTFLPYLTNPDLDELNDRCKSLKVHRHQQEQQSKLDAKNLSIQSNRHDT
Ga0315326_1052456933300031775SeawaterMKNIKEKEAKISIYINNKEVLYSHQNMLRVINTFFPYLTNDDLNEMSEHINTLKEHRHQQEQQSKLEAKNIPIQSNRHD
Ga0315316_1028759523300032011SeawaterMKNIKEKEAKISIYINNKEVLYSHQNMLRVINTFFPYLTNDDLNEMSEHINTLKEHRHQQEQQSKLEAKNIPIQSNRHDT
Ga0314858_078698_565_7923300033742Sea-Ice BrineMKNNIQIYINKKEVVYTRQNMIRAINTFLLYLTNPDLDELSDRCASLKEHRHQQEQQAQEEENRTPILSNRYDTN
Ga0314858_173492_3_2273300033742Sea-Ice BrineMKETDNKIQIFINKKELSYSRQNMIKAINTFLLYLTNSDLDELNDRCKSLKEHRHQQEQQANLEENRTPILSNRW


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