Metagenome / Metatranscriptome Family F096065

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096065
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	85 residues
Representative Sequence	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKVDGAALTEQMIRSFQVEIEEEEIVEVTPEDELRTLMSNSTEA
Number of Associated Samples	78
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.61 %
% of genes near scaffold ends (potentially truncated)	26.67 %
% of genes from short scaffolds (< 2000 bps)	66.67 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.095 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (19.048 % of family members)
Environment Ontology (ENVO)	Unclassified (63.810 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (78.095 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.14% β-sheet: 0.00% Coil/Unstructured: 50.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF05433	Rick_17kDa_Anti	10.48
PF10902	WYL_2	6.67
PF00574	CLP_protease	6.67
PF07715	Plug	2.86
PF13436	Gly-zipper_OmpA	1.90
PF13488	Gly-zipper_Omp	1.90
PF01521	Fe-S_biosyn	0.95
PF12850	Metallophos_2	0.95
PF01541	GIY-YIG	0.95
PF12697	Abhydrolase_6	0.95
PF01171	ATP_bind_3	0.95
PF13759	2OG-FeII_Oxy_5	0.95
PF10765	Phage_P22_NinX	0.95
PF13328	HD_4	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	13.33
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	13.33
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	6.67
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.95
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.95
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.95
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.95
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.95
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.95
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
All Organisms	root	All Organisms	41.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
cellular organisms	root	All Organisms → cellular organisms	24.76 %
Viruses	superkingdom	All Organisms → Viruses	17.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.48 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	6.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.19 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.67 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	2.86 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.90 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.19 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.86 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.90 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.95 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.95 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.19 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.86 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	1.90 %
Brucellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae	1.90 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.95 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.95 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.19 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.86 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	1.90 %
Brucella/Ochrobactrum group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group	1.90 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.95 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.95 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.19 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.86 %
unclassified Saprospirales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales	1.90 %
Brucella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella	1.90 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.95 %
Acinetobacter calcoaceticus/baumannii complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex	0.95 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.19 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.86 %
[Ochrobactrum] soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → [Ochrobactrum] soli	1.90 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	1.90 %
Acinetobacter baumannii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii	0.95 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.95 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.19 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.86 %
[Ochrobactrum] soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → [Ochrobactrum] soli	1.90 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	1.90 %
Acinetobacter baumannii NCGM 237	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii → Acinetobacter baumannii NCGM 237	0.95 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.95 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10018687	All Organisms → Viruses → Predicted Viral	4111	Open in IMG/M
3300000101\|DelMOSum2010_c10154050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	838	Open in IMG/M
3300000101\|DelMOSum2010_c10188915	Not Available	705	Open in IMG/M
3300000224\|SI34jun09_10mDRAFT_1036111	Not Available	707	Open in IMG/M
3300000265\|LP_A_09_P04_10DRAFT_1003849	Not Available	4016	Open in IMG/M
3300000265\|LP_A_09_P04_10DRAFT_1065372	Not Available	520	Open in IMG/M
3300000928\|OpTDRAFT_10126107	All Organisms → Viruses → Predicted Viral	1065	Open in IMG/M
3300003216\|JGI26079J46598_1022168	All Organisms → Viruses → Predicted Viral	1596	Open in IMG/M
3300003216\|JGI26079J46598_1028340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → [Ochrobactrum] soli	1310	Open in IMG/M
3300003345\|JGI26080J50196_1054612	Not Available	756	Open in IMG/M
3300003592\|JGI26246J51724_1072229	Not Available	646	Open in IMG/M
3300003617\|JGI26082J51739_10018223	Not Available	3054	Open in IMG/M
3300003617\|JGI26082J51739_10164070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	501	Open in IMG/M
3300003620\|JGI26273J51734_10022177	Not Available	2388	Open in IMG/M
3300004457\|Ga0066224_1159514	Not Available	808	Open in IMG/M
3300004460\|Ga0066222_1271624	Not Available	851	Open in IMG/M
3300005941\|Ga0070743_10016929	All Organisms → cellular organisms → Bacteria → Proteobacteria	2547	Open in IMG/M
3300006164\|Ga0075441_10075190	Not Available	1312	Open in IMG/M
3300006352\|Ga0075448_10212970	Not Available	590	Open in IMG/M
3300006399\|Ga0075495_1572198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	685	Open in IMG/M
3300007229\|Ga0075468_10007054	All Organisms → Viruses → Predicted Viral	4563	Open in IMG/M
3300007554\|Ga0102820_1039749	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	1147	Open in IMG/M
3300007557\|Ga0102821_1015977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	2049	Open in IMG/M
3300007557\|Ga0102821_1192538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	519	Open in IMG/M
3300008961\|Ga0102887_1239093	Not Available	549	Open in IMG/M
3300008993\|Ga0104258_1000832	All Organisms → cellular organisms → Bacteria	5169	Open in IMG/M
3300008993\|Ga0104258_1028653	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	1043	Open in IMG/M
3300009059\|Ga0102830_1108478	Not Available	821	Open in IMG/M
3300009172\|Ga0114995_10036194	All Organisms → cellular organisms → Bacteria → FCB group	2870	Open in IMG/M
3300009172\|Ga0114995_10063544	All Organisms → Viruses → Predicted Viral	2089	Open in IMG/M
3300009420\|Ga0114994_10364726	Not Available	958	Open in IMG/M
3300009432\|Ga0115005_10950528	Not Available	695	Open in IMG/M
3300009436\|Ga0115008_10019142	All Organisms → cellular organisms → Bacteria	5560	Open in IMG/M
3300009436\|Ga0115008_10037491	Not Available	3823	Open in IMG/M
3300009436\|Ga0115008_10254745	Not Available	1249	Open in IMG/M
3300009438\|Ga0115559_1090617	Not Available	1211	Open in IMG/M
3300009441\|Ga0115007_10320768	All Organisms → Viruses → Predicted Viral	1007	Open in IMG/M
3300009495\|Ga0115571_1015336	All Organisms → cellular organisms → Bacteria	4058	Open in IMG/M
3300009496\|Ga0115570_10027539	All Organisms → cellular organisms → Bacteria	3270	Open in IMG/M
3300009544\|Ga0115006_10691402	Not Available	897	Open in IMG/M
3300009705\|Ga0115000_10807821	Not Available	576	Open in IMG/M
3300012524\|Ga0129331_1508787	Not Available	596	Open in IMG/M
3300013010\|Ga0129327_10092378	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1491	Open in IMG/M
3300013010\|Ga0129327_10333235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii → Acinetobacter baumannii NCGM 237	792	Open in IMG/M
3300017697\|Ga0180120_10114334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1165	Open in IMG/M
3300017697\|Ga0180120_10271545	Not Available	684	Open in IMG/M
3300017950\|Ga0181607_10504909	All Organisms → Viruses	646	Open in IMG/M
3300018682\|Ga0188851_1010648	Not Available	1213	Open in IMG/M
3300020185\|Ga0206131_10111789	Not Available	1532	Open in IMG/M
3300021336\|Ga0210307_1272790	Not Available	584	Open in IMG/M
3300021957\|Ga0222717_10156431	Not Available	1383	Open in IMG/M
3300021957\|Ga0222717_10474227	Not Available	678	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10097198	Not Available	1306	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10025749	All Organisms → Viruses → Predicted Viral	4144	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10019472	Not Available	4212	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10030954	Not Available	3522	Open in IMG/M
3300024294\|Ga0228664_1079797	Not Available	734	Open in IMG/M
(restricted) 3300024324\|Ga0233443_1140194	Not Available	891	Open in IMG/M
3300024346\|Ga0244775_10016759	All Organisms → cellular organisms → Bacteria	6766	Open in IMG/M
3300024346\|Ga0244775_10027131	Not Available	5124	Open in IMG/M
3300024346\|Ga0244775_11348272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	550	Open in IMG/M
3300025276\|Ga0208814_1013641	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2844	Open in IMG/M
3300025570\|Ga0208660_1008814	All Organisms → cellular organisms → Bacteria	3445	Open in IMG/M
3300025636\|Ga0209136_1010050	All Organisms → Viruses → Predicted Viral	4310	Open in IMG/M
3300025658\|Ga0209659_1213732	Not Available	531	Open in IMG/M
3300025684\|Ga0209652_1175554	Not Available	540	Open in IMG/M
3300025767\|Ga0209137_1289601	Not Available	500	Open in IMG/M
3300025806\|Ga0208545_1006630	All Organisms → Viruses → Predicted Viral	4457	Open in IMG/M
3300025870\|Ga0209666_1037871	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2696	Open in IMG/M
3300025870\|Ga0209666_1200417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → [Ochrobactrum] soli	858	Open in IMG/M
3300027188\|Ga0208921_1048502	Not Available	623	Open in IMG/M
3300027197\|Ga0208922_1045345	Not Available	752	Open in IMG/M
3300027612\|Ga0209037_1045578	Not Available	1087	Open in IMG/M
3300027704\|Ga0209816_1282033	Not Available	510	Open in IMG/M
3300027752\|Ga0209192_10011227	All Organisms → Viruses → Predicted Viral	4861	Open in IMG/M
3300027752\|Ga0209192_10037403	All Organisms → Viruses → Predicted Viral	2260	Open in IMG/M
3300027753\|Ga0208305_10230419	Not Available	660	Open in IMG/M
3300027788\|Ga0209711_10081576	All Organisms → Viruses → Predicted Viral	1681	Open in IMG/M
3300027810\|Ga0209302_10255434	Not Available	823	Open in IMG/M
3300027813\|Ga0209090_10157463	All Organisms → Viruses → Predicted Viral	1195	Open in IMG/M
3300027833\|Ga0209092_10019380	All Organisms → Viruses → Predicted Viral	4631	Open in IMG/M
3300027833\|Ga0209092_10022514	All Organisms → Viruses → Predicted Viral	4206	Open in IMG/M
3300027833\|Ga0209092_10215518	Not Available	1073	Open in IMG/M
3300028008\|Ga0228674_1021742	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2702	Open in IMG/M
3300028196\|Ga0257114_1176052	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300031253\|Ga0307490_1014781	Not Available	606	Open in IMG/M
3300031519\|Ga0307488_10000132	Not Available	53394	Open in IMG/M
3300031519\|Ga0307488_10020851	Not Available	5278	Open in IMG/M
3300031519\|Ga0307488_10182156	Not Available	1440	Open in IMG/M
3300031519\|Ga0307488_10185029	All Organisms → cellular organisms → Bacteria → Proteobacteria	1425	Open in IMG/M
3300031519\|Ga0307488_10529619	Not Available	697	Open in IMG/M
3300031569\|Ga0307489_10277917	Not Available	1074	Open in IMG/M
3300031589\|Ga0307996_1009591	Not Available	2534	Open in IMG/M
3300031589\|Ga0307996_1073343	Not Available	908	Open in IMG/M
3300031589\|Ga0307996_1133713	Not Available	655	Open in IMG/M
3300031594\|Ga0302131_1046459	All Organisms → Viruses → Predicted Viral	1641	Open in IMG/M
3300031602\|Ga0307993_1013113	All Organisms → Viruses → Predicted Viral	2118	Open in IMG/M
3300031602\|Ga0307993_1083067	Not Available	807	Open in IMG/M
3300031608\|Ga0307999_1033791	Not Available	1237	Open in IMG/M
3300031629\|Ga0307985_10299984	Not Available	626	Open in IMG/M
3300031660\|Ga0307994_1117590	Not Available	927	Open in IMG/M
3300031696\|Ga0307995_1041478	Not Available	1967	Open in IMG/M
3300031702\|Ga0307998_1166552	Not Available	765	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.05%
Freshwater	Environmental → Aquatic → Freshwater	0.95%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	23.81%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	23.81%
Coastal	Environmental → Aquatic → Marine → Coastal	19.05%
Unclassified	Environmental → Aquatic → Marine → Unclassified	19.05%
Inlet	Environmental → Aquatic → Marine → Inlet	5.71%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.81%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	3.81%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	21.90%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	19.05%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	19.05%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	14.29%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	8.57%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	5.71%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	3.81%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.95%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	19.05%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	14.29%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	9.52%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	8.57%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	5.71%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	4.76%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.76%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.81%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.81%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	3.81%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.86%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.86%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.90%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.90%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.90%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.90%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	1.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.95%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.95%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.95%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.95%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.95%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.95%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000224	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 10m	Environmental	Open in IMG/M
3300000265	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_10	Environmental	Open in IMG/M
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental	Open in IMG/M
3300003216	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA	Environmental	Open in IMG/M
3300003345	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA	Environmental	Open in IMG/M
3300003592	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNA	Environmental	Open in IMG/M
3300003617	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300004457	Marine viral communities from Newfoundland, Canada MC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300006399	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007554	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300008961	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02	Environmental	Open in IMG/M
3300008993	Marine microbial communities from eastern North Pacific Ocean - P1 free-living	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental	Open in IMG/M
3300009606	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018682	Metatranscriptome of marine microbial communities from Baltic Sea - GS680_0p1	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300021336	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300022920 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024294	Seawater microbial communities from Monterey Bay, California, United States - 78D	Environmental	Open in IMG/M
3300024324 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_200_MG	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025570	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025636	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025658	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025684	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025767	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025870	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)	Environmental	Open in IMG/M
3300027188	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709 (SPAdes)	Environmental	Open in IMG/M
3300027197	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743 (SPAdes)	Environmental	Open in IMG/M
3300027612	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_125SG_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027753	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027810	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300027833	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028196	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m	Environmental	Open in IMG/M
3300031253	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SI3U	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031569	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2	Environmental	Open in IMG/M
3300031589	Marine microbial communities from David Island wharf, Antarctic Ocean - #35	Environmental	Open in IMG/M
3300031594	Marine microbial communities from Western Arctic Ocean, Canada - CB9_20m	Environmental	Open in IMG/M
3300031602	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #260	Environmental	Open in IMG/M
3300031608	Marine microbial communities from water near the shore, Antarctic Ocean - #1	Environmental	Open in IMG/M
3300031629	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #80	Environmental	Open in IMG/M
3300031660	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #261	Environmental	Open in IMG/M
3300031696	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262	Environmental	Open in IMG/M
3300031702	Marine microbial communities from David Island wharf, Antarctic Ocean - #37	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_1001868712	3300000101	Marine	MSSYVQEAIQNSGINRTELTAACAYLIRSKQASGQHDAIKQLASGKIDGAELIEQMTRSFQVELEEEEIVLNENEEGHDNVE*
DelMOSum2010_101540503	3300000101	Marine	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKVDGAALTEQMIRSFQVEIEEEEEIVEVTPEDELRTLMSNSTEA*
DelMOSum2010_101889152	3300000101	Marine	MSSYVQEAIQNSGINRTELTAACAYMIRTKQARGQHDAIEQLASGKINGAELMEQITRCYQVELEEEEIVLNENEEEHDNL*
SI34jun09_10mDRAFT_10361112	3300000224	Marine	MSSYVQEAIENSGINRTELTAACAYLIRSKQATGQHDAIEQLASGKINGAELIEQMTRSFQVEIEEEIVVEVTPEDELRTLMENSTE*
LP_A_09_P04_10DRAFT_10038491	3300000265	Marine	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVEVSPEDELRTLMANSTED*
LP_A_09_P04_10DRAFT_10653721	3300000265	Marine	SYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVEVSPEDELRTLMANSTE*
OpTDRAFT_101261071	3300000928	Freshwater And Marine	MSSYVQEAIQNSGINRTELVAACAYMIRTKLATGQHDAIKQLASGKVDSVELTEQMIRSFQVELEEGEIIEVRQVTPEEELRTLMS
JGI26079J46598_10221687	3300003216	Marine	MSSYVQEAIQNSGVNRTELVAACAYMIRTKQARSQHDAIEQLASGKINGADLLEQMTRSFQVEIEEEEIIEVATA
JGI26079J46598_10283404	3300003216	Marine	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKVDGAALTEQMIRSFQVEIEEEEIVEVTPEDELRTLMANSVE*
JGI26080J50196_10546124	3300003345	Marine	MSSYVQEAIQNSGINRTDLVAACAYMIRTKQARSQHDAIEQLASGKVDGASLTEQMTRSFQVEIEEEEIVEVTPEDE
JGI26246J51724_10722291	3300003592	Marine	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIV
JGI26082J51739_100182231	3300003617	Marine	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVEEEV
JGI26082J51739_101640701	3300003617	Marine	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKVDGAALTEQMMRSFQVEIEEEEIVEVTPEDELRTLMSNSVE*
JGI26273J51734_100221774	3300003620	Marine	MSSYVQEAIENSGINRTELVSACAYMIRTKQARGQHDAIKQLASGKINGAELMEQMIRSFQVELKEEEENVEVTTEDELRTLMSNSTEA*
Ga0066224_11595142	3300004457	Marine	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLASGKYDGIDLNVTLIKSFQVELEEETVEVSPEDELRNLMSNSTED*
Ga0066222_12716243	3300004460	Marine	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLASGKYDGIDLNETLIKSFQVELEEETVEV
Ga0070743_100169294	3300005941	Estuarine	MSSYVQEAIQNSGINRTDLVAACAYMIRTKQARSQHDAIEQLASGKVDGASLTEQMTRSFQVEIEEEEIVEVTPEDELRTLMSNSTEA*
Ga0075441_100751902	3300006164	Marine	MPSSNYNTRNNERLHKMSSYVQEAIQNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASGKINGTELMEQMTRCFQVELKEEVTPEDELRNLMNEHTST*
Ga0075448_102129701	3300006352	Marine	MGSNPMPSSNYNTRNNERLHKMSSYVQEAIQNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASGKINGTELMEQMTRCFQVELKEEVTPEDELRNLMNEHTST*
Ga0075495_15721983	3300006399	Aqueous	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKINGAELTEQMIRSFQVEIEEEEEIVEVTPEDELRTLMANSVE*
Ga0075468_1000705412	3300007229	Aqueous	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKINGAELTEQMIRSFQVEIEEEEEIVEVTPEDELRTLMSNSTEA*
Ga0102820_10397493	3300007554	Estuarine	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVEVSPEDELRTLMANSTE*
Ga0102821_10159777	3300007557	Estuarine	MSSYVQEAILNSSVNRTELVAACAYMIRTKQARSQHDAIEQLASGKVDGAALTEQMIRSFQVEIEEEEIVEVTPEDELRT
Ga0102821_11925382	3300007557	Estuarine	MSAYVQEAIENSGVNRTELVAACAYMIRTKQARSQHDAIEQLASGKVDGADLLEQMTRSFQVEIEEEIVEVTPEDELRTLMENSTES*
Ga0102887_12390932	3300008961	Estuarine	MSSYVQEAIQNSGINRTELVAACAYMIRSKQATGQHDAIEKLASGEINGADLLEQMTRSFQVEIEEEIVVEVTPEDELRILMANSTE*
Ga0104258_10008329	3300008993	Ocean Water	MSSYVQEAIQNSGINRTELVAACAYMIRTKLATGQHDAIKQLASGKVDSVELTEQMIRSFQVELEEGEIIEVRQVTPEEELRTLMSNSVE*
Ga0104258_10286533	3300008993	Ocean Water	MSAYVQEAIENSGVNRTELVAACAYMIRTKQARSQHDAIEQLASGKVDGADLLEQMTRSFQVEIEEEEIVEVTPEDELRTLMENSTES*
Ga0102830_11084781	3300009059	Estuarine	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVEVSPDDELRTLMANSTD*
Ga0114995_100361949	3300009172	Marine	MSAYVQEAILNSGINRTELTAACAYLIRTKQASGQNDAIEQLASGKINGAELMDQIIRCYQVEIKEEEIVEVTPEDELRNLMSNSTEA*
Ga0114995_100635448	3300009172	Marine	MSAYVQEAIQRSGVNRTELTAVCAYLIRTKQASGQHDALEQLASGKINGAELMEQITRCYQVELEEEGVQGD*
Ga0114994_103070353	3300009420	Marine	ELVAACAYMIRTKQARSQHDAIEQLASGKINGAELTEQMIRSFQVEIEEEEIVEVTPEDELRTLMANSVE*
Ga0114994_103647261	3300009420	Marine	MSSYVQEAIQNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASGKINGAELMEQMIRSFQVELKEEEIVELSGEDELRNLMKEKAST*
Ga0115005_109505284	3300009432	Marine	MSSYVQEAIQKSGVNRTELVSACAYMIRTKQARSQHDAIEQLASGKINGAELMEQITRCYQVELEEEGVQGD*
Ga0115008_1001914217	3300009436	Marine	MSAYVQQAIQVSGVNRTELVAVCAFLIRTKRATGQHDAIEQLASGKYNAKDLTEEMVRSFQLEVEEEEIVEVTPEDELRTLISNSTE*
Ga0115008_100374912	3300009436	Marine	MSSYVQEAIENSGINRTELTAACAYLIRSKQARGQHDAIEQLASGKINGAELIEQMTRSFQVEIEEEVVVEVTPEDELRTLMENSTE*
Ga0115008_102547451	3300009436	Marine	VQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLASGKYDGIDLNETLIKSFQVELEEETVEVSPEDELRNLMSNSTED*
Ga0115559_10906171	3300009438	Pelagic Marine	QEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKINGAELTEQMIRSFQVEIEEEEIVKLSGEDELRNLMSNSTEA*
Ga0115007_103207683	3300009441	Marine	MSSYVQEAIQKSGVNRTELVSACAYMIRTKQARSQHDAIEQLASGKINGAELMEQMIRSFQVELKEEEEEIVEVTTEDELRNLMNEHTST*
Ga0115571_10153369	3300009495	Pelagic Marine	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKVDGASLTEQMIRSFQVEIEEEEIVEVTPEDELRTLMSNSTEA*
Ga0115570_1002753910	3300009496	Pelagic Marine	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKINGAELTEQMIRSFQVEIEEEEIV
Ga0115006_106914023	3300009544	Marine	MSAYVQEAILNSGINRTELTAACAYLIRTKQASGQNDAIEQLASGKINGAELMDQIIRCYQVEIKEEEIVEVTTEDELRNLINEHTST*
Ga0115102_100244911	3300009606	Marine	ACAYLIRSKQATGQHDAIEKLASGEINGADLLEQMTRSFQVEIEEEVLVGLTPEDELRTLMSNSTEE*
Ga0115000_108078212	3300009705	Marine	MSAYVQEAIQRSGVNRTELTSVCAYLIRTKQASGQHDALEQLASGKINGAELMEQITRCYQVELEEEGIQED*
Ga0129331_15087874	3300012524	Aqueous	MSSYVQEAIQNSGINRTELTAALAYLIRSKQATGQHDAIEKLASGEINGADLLEQMTRSFQVEIEEEEIIETDTAEDELRTL
Ga0129327_100923786	3300013010	Freshwater To Marine Saline Gradient	MSSYVEEAIQRSGINRTEIVAVCAYLIRTKQASGQIDAIEQLASGKYDGIDLNETLIKSFQVEFEEETVEVSPEDELRNLMSNSTED*
Ga0129327_103332352	3300013010	Freshwater To Marine Saline Gradient	MSSYVQEAIQNSGINRTELTAALAYLIRSKQATGQHDAIEKLASGEINGADLLEQMTRSFQVEIEEEEIIETDTAEDELRTLMSNSVE*
Ga0180120_101143344	3300017697	Freshwater To Marine Saline Gradient	MSSYVEEAIQRSGINRTEIVAVCAYLIRTKQASGQIDAIEQLASGKYDGIDLNETLIKSFQVEFEEETVEVSPEDELRNLMSNSTED
Ga0180120_102715451	3300017697	Freshwater To Marine Saline Gradient	MSSYVQEAIQNSGINRTELTAALAYLIRSKQATGQHDAIEKLASGEINGADLLEQMTRSFQVEIEEEEIIETDTAEDELRTLMSNSVE
Ga0181607_105049092	3300017950	Salt Marsh	MSSYVQEAIQNSGINRTELTAACAYLIRSKQARSQHDAIQQLASGKIDGAELTEQMIRSFQVEIKEDEVVEVAPEDELRNLMENSTES
Ga0188851_10106487	3300018682	Freshwater Lake	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLASGKYDGVDLNEQLIKSFQVELEEEGVQEE
Ga0206131_101117894	3300020185	Seawater	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLASGKYDGINLNETLIKSFQVELEEETVEVSPEDELRTLMSNSTED
Ga0210307_12727902	3300021336	Estuarine	QNSGINRTELVAACAYMIRTKLATGQHDAIKQLASGKVDSVELTEQMIRSFQVELEEGEIIEVRQVTPEEELRTLMSNSVE
Ga0222717_101564316	3300021957	Estuarine Water	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVEVSPDDELRTLMANSTD
Ga0222717_104742273	3300021957	Estuarine Water	QRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVEVSPEDELRTLMANSTE
(restricted) Ga0233426_100971982	3300022920	Seawater	MSSYVQEAIQNSGINRTELVAACAYMIRTKLATGQHDAIKQLASGKVDSVELTEQMIRSFQVELEEGEIIEVRQVTPEEELRTLMSNSVE
(restricted) Ga0233432_100257491	3300023109	Seawater	IQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVEVSPDDELRTLMANSTE
(restricted) Ga0233438_100194728	3300024255	Seawater	MSSYVQEAIQQSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVEVSPDDELRTLMANSTE
(restricted) Ga0233444_100309548	3300024264	Seawater	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDRIDLNETLIKSFQVELEEEEIVEVSPDDELRTLMANSTE
Ga0228664_10797973	3300024294	Seawater	MSSYVQEAIENSGINRTELTAACAYLIRSKQARGQHDAIEQLASGKINGAELIEQMTRSFQVEIEEEVVVEVTPEDELRTLMENSTE
(restricted) Ga0233443_11401945	3300024324	Seawater	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEI
Ga0244775_1001675917	3300024346	Estuarine	MSSYVQEAIQNSGINRTDLVAACAYMIRTKQARSQHDAIEQLASGKVDGASLTEQMTRSFQVEIEEEEIVEVTPEDELRTLMSNSTEA
Ga0244775_1002713117	3300024346	Estuarine	SYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVEVSPEDELRTLMANSTED
Ga0244775_113482722	3300024346	Estuarine	MSAYVQEAIENSGVNRTELVAACAYMIRTKQARSQHDAIEQLASGKIDGAELMEQMIRSFQVEIEEEEIVEVTPEDELRILMANSTE
Ga0208814_10136417	3300025276	Deep Ocean	MPSSNYNTRNNERLHKMSSYVQEAIQNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASGKINGTELMEQMTRCFQVELKEEVTPEDELRNLMNEHTST
Ga0208660_10088141	3300025570	Aqueous	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKINGAELTEQMIRSFQVEIEEEEEIVEVTPEDELRTLMANSVE
Ga0209136_101005012	3300025636	Marine	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKVDGAALTEQMIRSFQVEIEEEEIVEVTPEDELRTLMANSVE
Ga0209659_12137323	3300025658	Marine	IQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVEVSPEDELRTLMANSTE
Ga0209652_11755541	3300025684	Marine	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKVDGAALTEQMIRSFQVEIEEEEIVEVTPEDELRTLMSNSTEA
Ga0209137_12896011	3300025767	Marine	SNLMIGVRFSLPAPTTSNTERLHKMSSYVQEAIQNSGVNRTELVAACAYMIRTKQARSQHDAIEQLASGKINGADLLEQMTRSFQVEIEEEEIIEVDTAEDELRTLMSNSTE
Ga0208545_100663011	3300025806	Aqueous	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKINGAELTEQMIRSFQVEIEEEEEIVEVTPEDELRTLMSNSTEA
Ga0209666_10378717	3300025870	Marine	MSSYVQEAIENSGINRTELVSACAYMIRTKQARGQHDAIKQLASGKINGAELMEQMIRSFQVELKEEEENVEVTTEDELRTLMSNSTEA
Ga0209666_12004173	3300025870	Marine	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKVDGAALTEQMTRSFQVEIEEEVVVEVTPEDELRTLMENSTE
Ga0208921_10485023	3300027188	Estuarine	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVEVSPEDELRTLMANSTE
Ga0208922_10453456	3300027197	Estuarine	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVEEEVT
Ga0209037_10455781	3300027612	Marine	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDGIDLNETLIKSFQVELEEEEIVDEEVTPEDELRTL
Ga0209816_12820331	3300027704	Marine	MGSNPMPSSNYNTRNNERLHKMSSYVQEAIQNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASGKINGTELMEQMTRCFQVELKEEVTPEDELRNLMNEHTST
Ga0209192_1001122714	3300027752	Marine	MSAYVQEAILNSGINRTELTAACAYLIRTKQASGQNDAIEQLASGKINGAELMDQIIRCYQVEIKEEEIVEVTPEDELRNLMSNSTEA
Ga0209192_100374035	3300027752	Marine	MSAYVQEAIQRSGVNRTELTAVCAYLIRTKQASGQHDALEQLASGKINGAELMEQITRCYQVELEEEGVQGD
Ga0208305_102304191	3300027753	Estuarine	MSSYVQEAIQNSGINRTELTAACAYLIRSKQASGQHDAIKQLASGKIDGAELIEQMTRSFQVELEEEEIVLNENEEGHDN
Ga0209711_100815766	3300027788	Marine	MSAYVQEAIQRSGVNRTELTSVCAYLIRTKQASGQHDALEQLASGKINGAELMEQITRCYQVELEEEGIQED
Ga0209302_102554342	3300027810	Marine	MSSYVQEAIQKSGVNRTELVSACAYMIRTKQARSQHDAIEQLASGKINGAELMEQMIRSFQVELKEEEEEIVEVTTEDELRNLMNEHTST
Ga0209090_101574636	3300027813	Marine	MSSYVQEAIQKSGVNRTELVSVCAYMIRTKQARSQHDAIEQLASGKINGAELMEQMIRSFQVELKEEEEIVEVTTEDELRNLMNEHTST
Ga0209092_100193806	3300027833	Marine	MSAYVQQAILNSSVNRTELVAACAFLIRSKQARSQHDAIEKLASGEVDGADLLEQMTRSFQVEIEEEEIVEVTPEDELRTLMENSTES
Ga0209092_100225149	3300027833	Marine	MSAYVQQAIQVSGVNRTELVAVCAFLIRTKRATGQHDAIEQLASGKYNAKDLTEEMVRSFQLEVEEEEIVEVTPEDELRTLISNSTE
Ga0209092_102155182	3300027833	Marine	MSSYVQEAIQRSGINRTELVAVCAYLIRTKQASGQIDAIEQLASGKYDGIDLNETLIKSFQVELEEETVEVSPEDELRNLMSNSTED
Ga0228674_10217422	3300028008	Seawater	MSSYVQEAIENSGINRTELVSACAYMIRTKQARGQHDAIKQLASGKINGAELMEQMIRSFQVELKEEENVEVTTEDELRTLMSNSTEA
Ga0257114_11760521	3300028196	Marine	MSSYVQEAIQQSGINRTELVAVCAYLIRTKQASGQIDAIEQLAAGKYDRIDLNETLIKSFQVELEEEEIVEVSPDDELRTLMANSTE
Ga0307490_10147811	3300031253	Sea-Ice Brine	VNRTELTSVCAYLIRTKQASGQHDALEQLASGKINGAELMEQITRCYQVELEEEGIQED
Ga0307488_1000013265	3300031519	Sackhole Brine	MSAYVQEAIENSGINRTELVAACAYMIRTKLATGQHDAIKQLASGKVDSVELTEQMIRSFQVELEEEEIVSQVTPEEELRTLMSNSVE
Ga0307488_100208514	3300031519	Sackhole Brine	MSSYVQEAIQNSGVNRTELTAVCAYMIRTKQAQGQHDAIEQLASGKINGAELMEQMTRSFQVELKEEVAEVTPEDELRNLMNEHTST
Ga0307488_101821561	3300031519	Sackhole Brine	MSAYVQEAILNSGINRTELTAACAYLIRTKQASGQNDAIEQLASGKINGAELMDQIIRCYQVEIKEEETVEVSPEDELRNLMSNSTED
Ga0307488_101850298	3300031519	Sackhole Brine	MSSYVQEAIQNSGINRTELVAACAYMIRTKQARSQHDAIEQLASGKINGAELTEQMIRSFQVEIEEEEIVKLSGEDELRNLMSNSTEA
Ga0307488_105296193	3300031519	Sackhole Brine	MSSYVQEAIENSGINRTELTAACAYLIRTKQARSQHDAIEQLASGKINGAELTEQMIRSFQVEIEEEEIVEVTPEDELRTLMANSVE
Ga0307489_102779175	3300031569	Sackhole Brine	MSSYVQEAIQKSGVNRTELVSVCAYMIRTKQARSQHDAIEQLASGKINGAELTEQMIRSFQVEIEEEEIVKLSGEDELRNLMSNSTEA
Ga0307996_10095918	3300031589	Marine	MPSSNYNTRNNERLHKMSSYVQEAIQNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASSKINGAELMEQMIRSFQFELKEEVAEVTPEDELRNLMNEHTST
Ga0307996_10733433	3300031589	Marine	MSSYVQEAIQNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASGKINGAELMEQMTRSFQVELKEEVAEVTPEDELRNLMNEHTST
Ga0307996_11337134	3300031589	Marine	VQEAIQNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASGKINGTELMEQMTRCFQVELKEEVTPEDELRNLMNEHTST
Ga0302131_10464596	3300031594	Marine	MSAYVQEAIQRSGVNRTELTAVCAYLIRTKQASGQHDALEQLASGKINGAELMEQITRCYQVELEEEGIQED
Ga0307993_10131134	3300031602	Marine	MSSYVQEAIQNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASSKINGAELMEQMIRSFQFELKEEVAEVTPEDELRNLMNEHTST
Ga0307993_10830674	3300031602	Marine	QNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASGKINGAELMEQMTRSFQVELKEEVAEVTPEDELRNLMNEHTST
Ga0307999_10337917	3300031608	Marine	MSSYVQEAIQNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASGKINGTELMEQMTRCFQVELKEEVTPEDELRNLMNEHTST
Ga0307985_102999841	3300031629	Marine	MGSNPMPSSNYNTRNNERLHKMSSYVQEAIQNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASSKINGAELMEQMIRSFQFELKEEVAEVTPEDELRNLMNEHTST
Ga0307994_11175901	3300031660	Marine	QNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASGKINGTELMEQMTRCFQVELKEEVTPEDELRNLMNEHTST
Ga0307995_10414788	3300031696	Marine	YNTRNNERLHKMSSYVQEAIQNSGINRTELTAVCAYMIRTKQARGQHDAIEQLASSKINGAELMEQMIRSFQFELKEEVAEVTPEDELRNLMNEHTST
Ga0307998_11665523	3300031702	Marine	MSSYVQEAIENSGINRTELTAACAYLIRSKRARSQHDAIEQLASGKINGAELMEQMIRSFQVELKEEVAEVTPEDELRNLMNEHTST

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters