NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F096039

Metagenome Family F096039

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096039
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 53 residues
Representative Sequence MNEGDLIAELLQITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI
Number of Associated Samples 56
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Viruses
% of genes with valid RBS motifs 72.12 %
% of genes near scaffold ends (potentially truncated) 14.42 %
% of genes from short scaffolds (< 2000 bps) 74.29 %
Associated GOLD sequencing projects 43
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Predicted Viral (45.192 % of family members)
NCBI Taxonomy ID 10239 (predicted)
Taxonomy All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(41.905 % of family members)
Environment Ontology (ENVO) Unclassified
(60.952 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(93.333 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.72%    β-sheet: 24.05%    Coil/Unstructured: 58.23%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF02700PurS 42.86
PF06868DUF1257 3.81
PF01106NifU 2.86
PF07728AAA_5 2.86
PF11211DUF2997 1.90
PF11753DUF3310 1.90
PF00565SNase 1.90
PF00111Fer2 1.90
PF11360DUF3110 1.90
PF137592OG-FeII_Oxy_5 1.90
PF01050MannoseP_isomer 0.95
PF00156Pribosyltran 0.95
PF09116gp45-slide_C 0.95
PF00124Photo_RC 0.95
PF11649T4_neck-protein 0.95
PF00004AAA 0.95
PF08406CbbQ_C 0.95
PF01259SAICAR_synt 0.95
PF11053DNA_Packaging 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG1828Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunitNucleotide transport and metabolism [F] 42.86
COG0694Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domainPosttranslational modification, protein turnover, chaperones [O] 2.86
COG0152Phosphoribosylaminoimidazole-succinocarboxamide synthaseNucleotide transport and metabolism [F] 0.95
COG0714MoxR-like ATPaseGeneral function prediction only [R] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms80.77 %
UnclassifiedrootN/A19.23 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002488|JGI25128J35275_1024786All Organisms → Viruses → Predicted Viral1444Open in IMG/M
3300002488|JGI25128J35275_1045999All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae962Open in IMG/M
3300005404|Ga0066856_10006028All Organisms → cellular organisms → Bacteria5044Open in IMG/M
3300005404|Ga0066856_10034776All Organisms → Viruses → Predicted Viral2203Open in IMG/M
3300005404|Ga0066856_10047112All Organisms → Viruses → Predicted Viral1883Open in IMG/M
3300005404|Ga0066856_10149113All Organisms → Viruses → Predicted Viral1021Open in IMG/M
3300005404|Ga0066856_10208675Not Available848Open in IMG/M
3300006024|Ga0066371_10170666All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae671Open in IMG/M
3300006166|Ga0066836_10047638All Organisms → Viruses → Predicted Viral2432Open in IMG/M
3300006565|Ga0100228_1180052All Organisms → Viruses → Predicted Viral1801Open in IMG/M
3300006565|Ga0100228_1327390All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae686Open in IMG/M
3300006565|Ga0100228_1399245All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae507Open in IMG/M
3300006735|Ga0098038_1035106All Organisms → Viruses → Predicted Viral1858Open in IMG/M
3300006735|Ga0098038_1157812All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae752Open in IMG/M
3300006749|Ga0098042_1005766All Organisms → Viruses → Predicted Viral4160Open in IMG/M
3300006751|Ga0098040_1004957All Organisms → Viruses → Predicted Viral4948Open in IMG/M
3300006751|Ga0098040_1085289All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae → Tequatrovirus959Open in IMG/M
3300006928|Ga0098041_1005821All Organisms → Viruses → Predicted Viral4234Open in IMG/M
3300006928|Ga0098041_1020224All Organisms → Viruses → Predicted Viral2178Open in IMG/M
3300006928|Ga0098041_1079180All Organisms → Viruses → Predicted Viral1060Open in IMG/M
3300008097|Ga0111541_10093759All Organisms → Viruses → Predicted Viral1208Open in IMG/M
3300008097|Ga0111541_10123026All Organisms → Viruses → Predicted Viral1060Open in IMG/M
3300009481|Ga0114932_10003934All Organisms → Viruses14185Open in IMG/M
3300009481|Ga0114932_10821821All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae538Open in IMG/M
3300009593|Ga0115011_10114259All Organisms → Viruses → Predicted Viral1923Open in IMG/M
3300009593|Ga0115011_10157811All Organisms → Viruses → Predicted Viral1650Open in IMG/M
3300009593|Ga0115011_10436846All Organisms → Viruses → Predicted Viral1026Open in IMG/M
3300009790|Ga0115012_10137631All Organisms → Viruses → Predicted Viral1747Open in IMG/M
3300009790|Ga0115012_10187050All Organisms → Viruses → Predicted Viral1512Open in IMG/M
3300009790|Ga0115012_10492319Not Available956Open in IMG/M
3300009790|Ga0115012_10805121Not Available761Open in IMG/M
3300009794|Ga0105189_1012389Not Available788Open in IMG/M
3300009794|Ga0105189_1020145Not Available630Open in IMG/M
3300011013|Ga0114934_10006304All Organisms → Viruses7108Open in IMG/M
3300012952|Ga0163180_10134082All Organisms → Viruses → Predicted Viral1626Open in IMG/M
3300012952|Ga0163180_10154040All Organisms → Viruses → Predicted Viral1529Open in IMG/M
3300012952|Ga0163180_10830481All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM2726Open in IMG/M
3300012952|Ga0163180_11273502All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM2 → Prochlorococcus phage P-SSM2604Open in IMG/M
3300012952|Ga0163180_11414536All Organisms → Viruses578Open in IMG/M
3300012953|Ga0163179_10573141All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300012953|Ga0163179_11030233Not Available719Open in IMG/M
3300012953|Ga0163179_11640968All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM2582Open in IMG/M
3300012954|Ga0163111_10489278All Organisms → Viruses → Predicted Viral1132Open in IMG/M
3300017738|Ga0181428_1115443Not Available629Open in IMG/M
3300017738|Ga0181428_1171306All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM2 → Prochlorococcus phage P-SSM2507Open in IMG/M
3300017759|Ga0181414_1040829All Organisms → Viruses → Predicted Viral1248Open in IMG/M
3300017765|Ga0181413_1183346Not Available627Open in IMG/M
3300017767|Ga0181406_1171979Not Available648Open in IMG/M
3300020270|Ga0211671_1038696All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae919Open in IMG/M
3300020294|Ga0211520_1002481All Organisms → Viruses → Predicted Viral3398Open in IMG/M
3300020310|Ga0211515_1062417All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Galenevirus → Galenevirus mbcm1685Open in IMG/M
3300020343|Ga0211626_1157490All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae504Open in IMG/M
3300020345|Ga0211706_1109611Not Available554Open in IMG/M
3300020379|Ga0211652_10005345All Organisms → Viruses → Predicted Viral3951Open in IMG/M
3300020379|Ga0211652_10085766Not Available948Open in IMG/M
3300020379|Ga0211652_10150451All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM2 → Prochlorococcus phage P-SSM2708Open in IMG/M
3300020395|Ga0211705_10047328All Organisms → Viruses → Predicted Viral1553Open in IMG/M
3300020421|Ga0211653_10004362All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae7384Open in IMG/M
3300020421|Ga0211653_10111718All Organisms → Viruses → Predicted Viral1213Open in IMG/M
3300020438|Ga0211576_10000286All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae43794Open in IMG/M
3300020438|Ga0211576_10132105All Organisms → Viruses → Predicted Viral1361Open in IMG/M
3300020438|Ga0211576_10449574Not Available655Open in IMG/M
3300020445|Ga0211564_10000009All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales95515Open in IMG/M
3300020445|Ga0211564_10008826All Organisms → Viruses → Predicted Viral4999Open in IMG/M
3300020445|Ga0211564_10270746Not Available838Open in IMG/M
3300020445|Ga0211564_10368841All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae706Open in IMG/M
3300020445|Ga0211564_10573608Not Available549Open in IMG/M
3300020451|Ga0211473_10142003All Organisms → Viruses → Predicted Viral1235Open in IMG/M
3300020454|Ga0211548_10375935Not Available695Open in IMG/M
3300020459|Ga0211514_10011300All Organisms → Viruses → Predicted Viral4977Open in IMG/M
3300020459|Ga0211514_10230575Not Available913Open in IMG/M
3300020464|Ga0211694_10042399All Organisms → Viruses → Predicted Viral1761Open in IMG/M
3300020465|Ga0211640_10130992All Organisms → Viruses → Predicted Viral1433Open in IMG/M
3300020470|Ga0211543_10337967All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae728Open in IMG/M
3300020472|Ga0211579_10009098All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae6779Open in IMG/M
3300020472|Ga0211579_10119907All Organisms → Viruses → Predicted Viral1565Open in IMG/M
3300020472|Ga0211579_10169204All Organisms → Viruses1279Open in IMG/M
3300020472|Ga0211579_10802114All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM2 → Prochlorococcus phage P-SSM2520Open in IMG/M
3300020472|Ga0211579_10853354Not Available501Open in IMG/M
3300021185|Ga0206682_10063060All Organisms → Viruses → Predicted Viral1960Open in IMG/M
3300024344|Ga0209992_10004914All Organisms → Viruses10188Open in IMG/M
3300025086|Ga0208157_1000658All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae17816Open in IMG/M
3300025086|Ga0208157_1110165Not Available651Open in IMG/M
3300025101|Ga0208159_1005016All Organisms → Viruses → Predicted Viral4112Open in IMG/M
3300025110|Ga0208158_1002028All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae6374Open in IMG/M
3300025110|Ga0208158_1013003All Organisms → Viruses → Predicted Viral2248Open in IMG/M
3300025132|Ga0209232_1036898All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1845Open in IMG/M
3300026076|Ga0208261_1055962All Organisms → Viruses → Predicted Viral1080Open in IMG/M
3300026134|Ga0208815_1001364All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae5250Open in IMG/M
3300026134|Ga0208815_1011673All Organisms → Viruses → Predicted Viral1224Open in IMG/M
3300026292|Ga0208277_1025272All Organisms → Viruses → Predicted Viral2761Open in IMG/M
3300026292|Ga0208277_1107273All Organisms → Viruses → Predicted Viral1000Open in IMG/M
3300026292|Ga0208277_1125785All Organisms → Viruses892Open in IMG/M
3300026292|Ga0208277_1202524All Organisms → Viruses631Open in IMG/M
3300026321|Ga0208764_10135084All Organisms → Viruses → Predicted Viral1254Open in IMG/M
3300027077|Ga0208941_1006950All Organisms → Viruses → Predicted Viral1632Open in IMG/M
3300027830|Ga0209359_10055040All Organisms → Viruses → Predicted Viral1563Open in IMG/M
3300027906|Ga0209404_10003132All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae9860Open in IMG/M
3300027906|Ga0209404_10091356All Organisms → Viruses → Predicted Viral1788Open in IMG/M
3300027906|Ga0209404_10195698All Organisms → Viruses → Predicted Viral1251Open in IMG/M
3300027906|Ga0209404_10703658All Organisms → Viruses681Open in IMG/M
3300029787|Ga0183757_1004982All Organisms → Viruses → Predicted Viral4496Open in IMG/M
3300031774|Ga0315331_10676506Not Available731Open in IMG/M
3300031775|Ga0315326_10511671Not Available771Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine41.90%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine30.48%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater7.62%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater4.76%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic3.81%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface3.81%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine2.86%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater2.86%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.95%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300005404Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205EnvironmentalOpen in IMG/M
3300006024Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_BEnvironmentalOpen in IMG/M
3300006166Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91EnvironmentalOpen in IMG/M
3300006565Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125mEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300008097Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (version 2)EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300009794Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245EnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300020270Marine microbial communities from Tara Oceans - TARA_B100001029 (ERX555928-ERR599042)EnvironmentalOpen in IMG/M
3300020294Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556124-ERR599153)EnvironmentalOpen in IMG/M
3300020310Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX556067-ERR598950)EnvironmentalOpen in IMG/M
3300020343Marine microbial communities from Tara Oceans - TARA_B100000475 (ERX555975-ERR599174)EnvironmentalOpen in IMG/M
3300020345Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX556079-ERR599137)EnvironmentalOpen in IMG/M
3300020379Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)EnvironmentalOpen in IMG/M
3300020395Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX555987-ERR599133)EnvironmentalOpen in IMG/M
3300020421Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020445Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)EnvironmentalOpen in IMG/M
3300020451Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)EnvironmentalOpen in IMG/M
3300020454Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)EnvironmentalOpen in IMG/M
3300020459Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX555913-ERR599095)EnvironmentalOpen in IMG/M
3300020464Marine microbial communities from Tara Oceans - TARA_B100000530 (ERX556075-ERR599101)EnvironmentalOpen in IMG/M
3300020465Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300020472Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025101Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300026076Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (SPAdes)EnvironmentalOpen in IMG/M
3300026134Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245 (SPAdes)EnvironmentalOpen in IMG/M
3300026292Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205 (SPAdes)EnvironmentalOpen in IMG/M
3300026321Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)EnvironmentalOpen in IMG/M
3300027077Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C27A4_35 (SPAdes)EnvironmentalOpen in IMG/M
3300027830Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25128J35275_102478633300002488MarineMQDDEGTLISEMLTLTALLGGKMERTEVYESKGRQYKKIVIEYDSQEWVRNEI*
JGI25128J35275_104599943300002488MarineMNEGDLIAELSKITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWVRNEI*
Ga0066856_10006028103300005404MarineMNRQDEGDLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYERNEI*
Ga0066856_1003477623300005404MarineMNEGNLVAELESITDQLGGKLERITGYRSDGRQYKKIVIEYDEKEWKRNE*
Ga0066856_1004711233300005404MarineMDNRSTSEENQMSNGDLIAELLVITAELGGRMERRDVYDSTGRQYKKIVIKYDEKEWERND*
Ga0066856_1014911323300005404MarineMENDSDLIEELRTIAERLGGTMERIDGYKSEGRQYKKIVIEYDSQEWIRNEI*
Ga0066856_1020867533300005404MarineMTNKINEGDLIAELLTITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI*
Ga0066371_1017066623300006024MarineMNEGDLIAELSKITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI*
Ga0066836_1004763863300006166MarineMTFNDGDLIAELLTITAEMGGKMERRDVYESTGRQYKKIVIEYDSKEWKRNDKL*
Ga0100228_118005233300006565MarineMTTEEDKFHKLPEGDLIAELLCISGELGGTMERREVYESQGRKYKKIVIEYDSQEWVRNEI*
Ga0100228_132739013300006565MarineMNEGDLIAELLQITAELGGTMERIDGYKSEGRQYKKIVIEYDSTEWKRNEI*
Ga0100228_139924513300006565MarineMNEGDLIAELSKITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWIRNEI*
Ga0098038_103510643300006735MarineMSNGDLIAELLVITAELGGKMERTEVYDSTGRQYKKIVIEYDVKEWERNHKANLK*
Ga0098038_115781223300006735MarineMNDGDLIAELLAITAELGGTMERREVYESTGRQYKKIVIEYDSTEWERNEI*
Ga0098042_100576663300006749MarineMSNGDLIAELLVITAELGGSMERTEVYESTGRQYKKIVIEYDVKEWERNHKANLK*
Ga0098040_100495793300006751MarineMTFNDGDLIAELLTITAELGGKMERRDVYESTGRQYKKIVIEYDSKEWKRNEI*
Ga0098040_108528923300006751MarineMRNQMNDGDLIAELLTITAELGGKMERREVYESTGRKYKKIVIKYDSQEWVRNEI*
Ga0098041_100582183300006928MarineMSRQDEGDLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYKRDEV*
Ga0098041_102022463300006928MarineMSNGDLIAELLVITAELGGSMERTEVYDSTGRQYKKIVIEYDVKEWERNHKANLK*
Ga0098041_107918043300006928MarineMNEGNLVSELESITDQLGGKLERITGYRSDGRQYKKIVIEYDSKEWKRNEI*
Ga0111541_1009375923300008097MarineMSNGDLIAELLVITAELGGKMERRDVYDSTGRQYKKIVIEYDVKEWKRND*
Ga0111541_1012302653300008097MarineMVNDSDLIEELRTIAEGLGGTMDRIDGYKSEGRQYKKIVIEYDSREWKRNEI*
Ga0114932_10003934133300009481Deep SubsurfaceMANDSDLIQELRTIVERLGGTMERIDGYKSEGRQYKKIVIEYDSREWKRNEI*
Ga0114932_1082182123300009481Deep SubsurfaceMSNGDLIAELLVITAELGGSMERTEVYDSTGRQYKKIVIEYDEKEWERNV*
Ga0115011_1011425943300009593MarineMNEGDLIAELRTIAERLGGTMERIDGYKSEGSQYKKIVIEYDSKEWKRNEV*
Ga0115011_1015781153300009593MarineMRNQMNDGDLIAELLTITAELGGKMERREVYESTGRQYKKIVIEYDSQEWKRNEI*
Ga0115011_1043684623300009593MarineMNRQDEGDLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYKRDEV*
Ga0115012_1013763143300009790MarineMSNGDLIAELLVITAELGGRMERRDVYDSTGRQYKKIVIKYDEKEWERND*
Ga0115012_1018705013300009790MarineMTNKINEGDLIAELLTITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEW
Ga0115012_1049231933300009790MarineGDLISELLTITALLGGTMERQDVYDSTGRQYKKIVIKYDEKGWERNEI*
Ga0115012_1080512123300009790MarineMKMHDDEGTLISEMLTLTDLLGGRMERTEVYESKGRQYKKIVIEYDSKEWKRNEV*
Ga0105189_101238933300009794Marine OceanicMNEGDLIAELLQITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI*
Ga0105189_102014523300009794Marine OceanicMNRQDEGELIAELLCITGELGGKMKRLDCYESTGRRYKKIVIEYDSTEYKRDEV*
Ga0114934_1000630423300011013Deep SubsurfaceMVNDSDLIEELRTIAEGLGGTMERIDGYKSEGRQYKKIVIEYDSREWKRNEI*
Ga0163180_1013408223300012952SeawaterMNEGDLIAELLQITAELGGTMERVDGYKSEGRQYKKIVIEYDSKEWKRNEI*
Ga0163180_1015404063300012952SeawaterMENKMNDGDLIAELLTITAELGGTMERREVYESTGRQYKKIVIEYDSAEWERNEI*
Ga0163180_1083048143300012952SeawaterMSNGDLIAELLVITAELGGSMERTEVYESKGRQYKKIVIEYDVKEWERNV*
Ga0163180_1127350223300012952SeawaterMSNGDLIAELLVITAELGGKMERRDVYDSTGRQYKKIVIEYDVKEWERNHKANLK*
Ga0163180_1141453623300012952SeawaterMNEGDLIAELSKITAKIGGTMERIDGYKSEGRQYKKIVIEYDSQEWVRNEI*
Ga0163179_1057314123300012953SeawaterMNEGDLIAELLEITAELGGTMERIDGYKSEGRQYKKIVIEYDSQEWIRNEI*
Ga0163179_1103023313300012953SeawaterMSNGDLIAELLTITAELGGTMERRDVYDSTGRQYKKIVIEYDSAEWERNEI*
Ga0163179_1164096833300012953SeawaterMSNGDLIAELLVITAELGGKMERTEVYESNGRQYKKIVIEYDVEEWERNHKANLK*
Ga0163111_1048927853300012954Surface SeawaterMSNGDLIAELSKITAELGGTMERRDVYDSTGRQYKKIVIEYDVKEWERNEI*
Ga0181428_111544313300017738SeawaterMVNGSDLIEELRTIAERLGGTIERIDGYKSEGRQYKKIVIEYDSQDWIRNEI
Ga0181428_117130623300017738SeawaterMKNKMNDGDLIAELLTITAELGGTMERREVYESTGRQYKKIVIEYNSTEWERNEI
Ga0181414_104082923300017759SeawaterMNEGDLIAELLEITAELGGTMERIDGYKSEGRQYKKIVIEYDSQEWVRNEI
Ga0181413_118334613300017765SeawaterTEHVATQLRSKMNEGDLIAELLEITAELGGTMERIDGYKSEGRQYKKIVIEYDSQEWIRNEI
Ga0181406_117197913300017767SeawaterKRGLMVNGSDLIEELRTIAERLGGTMERREVYESTGRQYKKIVIEYNSTEWERNEI
Ga0211671_103869623300020270MarineMSNGDLIAELLVITAELGGSMERTEVYDSTGRQYKKIVIEYDVKEWERNHKANVK
Ga0211520_100248123300020294MarineMSNGDLIAELLVITAELGGSMERTEVYDSTGRQYKKIVIEYDEKEWERNV
Ga0211515_106241723300020310MarineMTFNDGDLIAELLTITAELGGKMERRDVYESTGRQYKKIVIEYDSKEWKRNEI
Ga0211626_115749033300020343MarineMDNXSTSEEKQMSNGDLIAELLVITAELGGSMERTEVYESKGRQYKKIVIEYDVKEWERN
Ga0211706_110961123300020345MarineMNRQDEGDLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYERNEI
Ga0211652_1000534533300020379MarineMNEGNLVSELESITDQLGGKLERITGYRSDGRQYKKIVIEYDLKEWKRNA
Ga0211652_1008576613300020379MarineMSRQDEADLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYKRD
Ga0211652_1015045123300020379MarineMTNKINEGDLIAELLTITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWIRNEI
Ga0211705_1004732833300020395MarineMNEGDLIAELLQITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI
Ga0211653_1000436253300020421MarineMNEGNLVAELESITDQLGGKLERITGYRSDGRQYKKIVIEYDLKEWKRNA
Ga0211653_1011171843300020421MarineMNRQDEGDLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYKRDEV
Ga0211576_1000028663300020438MarineMKNKMNDGDLIAELLTITAELGGTMERREVYESTGRQYKKIVIEYDSTEWERNEI
Ga0211576_1013210533300020438MarineMSNGDLIAELLVITAELGGKMERTEVYESKGRQYKKIVIEYDVEEWERNHKANLK
Ga0211576_1044957413300020438MarineMVNGSDLIEELRTIAERLGGTMERREVYESTGRQYKKIVIEYNSTEWERNEI
Ga0211564_100000091033300020445MarineMTFNDGDLIAELLTITAELGGKMERRDVYESTGRQYKKIVIEYDSKEWKRNDKL
Ga0211564_1000882633300020445MarineMSNGDLIAELLTITAKLGGTMERRDVYDSKGRQYKKIVIEYDSKEWKRNEI
Ga0211564_1027074623300020445MarineMNEVNLVSELESITDQLGGNLERITGYRSDGRQYKKIVIEYDLKEWKRNEI
Ga0211564_1036884123300020445MarineMNEGNLVAELESITDQLGGKLERITGYRSDGRQYKKIVIEYDSKEWKRNEI
Ga0211564_1057360823300020445MarineMSNGDLIAELLVITAELGGRMERRDVYDSTGRQYKKIVIEYDVKEWERNEI
Ga0211473_1014200313300020451MarineMVNDSDLIEELRTIAEGLGGTMERIDGYKSEGRQYKKIVIEYDSREWKRNEI
Ga0211548_1037593523300020454MarineMDNXSTSEEKQMSNGDLIAELLVITAELGGSMERTEVYESTGRQYKKIVIEYDEKEWERN
Ga0211514_1001130033300020459MarineMSNGDLIAELLTITAELGGTMERRDVYDSTGRQYKKIVIEYDSKEWKRNEI
Ga0211514_1023057533300020459MarineMQDDEGTLISEMLTLTALLGGKMERTEVYESKGRQYKKIVIEYDSQEWVRNEI
Ga0211694_1004239943300020464MarineMSNGDLIAELLVITAELGGKMERRDVYDSTGRQYKKIVIEYDVKEWKRND
Ga0211640_1013099233300020465MarineMTTEEDKFHKLPEGDLIAELLCISGELGGTMERREVYESQGRKYKKIVIEYDSQEWVRNE
Ga0211543_1033796733300020470MarineMSNGDLIAELLVITAELGGTMERLDGCTSDGRQYKKIVIKYDEKEWERNV
Ga0211579_1000909873300020472MarineMIEYDEGELIAELLCITGELNGKMERIDGYRSDGRQYKKIVIEYDSKEWKRNEI
Ga0211579_1011990763300020472MarineMKNKMNDSDLIEELRTIAERLGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI
Ga0211579_1016920423300020472MarineMVNGSDLIEELRTIAERLGGTIERIDGYKSEGRQYKKIVIEYDSKEWKRNEI
Ga0211579_1080211433300020472MarineMTNKINEGDLIAELLTITAELGGTMERIDGYKSEGSQYKKIVIEYDSKEWKRNEI
Ga0211579_1085335423300020472MarineMSNGDLIAELLTITAELGGTMERRDVYDSKGRQYKKIVIEYDSKEWKRNEI
Ga0206682_1006306023300021185SeawaterMSNGDLIAELLIITAELGGKMERRDVYDSTGRQYKKIVIEYDSKEWKRNEI
Ga0209992_10004914183300024344Deep SubsurfaceMANDSDLIQELRTIVERLGGTMERIDGYKSEGRQYKKIVIEYDSREWKRNEI
Ga0208157_1000658113300025086MarineMSNGDLIAELLVITAELGGKMERTEVYDSTGRQYKKIVIEYDVKEWERNHKANLK
Ga0208157_111016513300025086MarineMSNGDLIAELLVITAELGGSMERTEVYDSTGRQYKKIVIEYDVKEWERNHKANLKXVNN
Ga0208159_100501633300025101MarineMSNGDLIAELLVITAELGGRMERTEVYDSTGRQYKKIVIEYDVKEWERNHKANLK
Ga0208158_100202843300025110MarineMTNKINEGDLIAELLTITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI
Ga0208158_101300353300025110MarineMSRQDEGDLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYKRDEV
Ga0209232_103689813300025132MarineMNEGDLIAELSKITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEW
Ga0208261_105596213300026076MarineMVNDSDLIEELRTIAEGLGGTMDRIDGYKSEGRQYKKIVIEYDSREWKRNEI
Ga0208815_100136463300026134Marine OceanicMHDDEGTLISELLTITALLGGKMERTEVYESKGRQYKKIVIEYDSHEWVRNEI
Ga0208815_101167323300026134Marine OceanicMNEGDLIAELLEITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWIRNEI
Ga0208277_102527213300026292MarineMNEGNLVAELESITDQLGGKLERITGYRSDGRQYKKIV
Ga0208277_110727333300026292MarineMSNGDLIAELLVITAELGGRMERRDVYDSTGRQYKKIVIKYDEKEWERND
Ga0208277_112578523300026292MarineMENDSDLIEELRTIAERLGGTMERIDGYKSEGRQYKKIVIEYDSQEWIRNEI
Ga0208277_120252413300026292MarineNEGDLIAELLCITGELGGTMERIDGYKSEGRQYKKIVIEYDSQEWVRNEI
Ga0208764_1013508443300026321MarineIKMTFNDGDLIAELLTITAEMGGKMERRDVYESTGRQYKKIVIEYDSKEWKRNDKL
Ga0208941_100695053300027077MarineMSNGDLIAELLVITAELGGKMERTEVYESKGRQYKKIVIEYDVEEWERNH
Ga0209359_1005504063300027830MarineVLYCKKRGSMVNDSDLIEELRTIAEGLGGTMERIDGYKSEGRQYKKIVIEYDSREWKRNE
Ga0209404_1000313223300027906MarineMNEGNLVSELESITDQLGGKLERITGYRSDGRQYKKIVIEYDSKEWKRNEI
Ga0209404_1009135663300027906MarineMRNQMNDGDLIAELLTITAELGGKMERREVYESTGRQYKKIVIEYDSQEWKRNEI
Ga0209404_1019569823300027906MarineMHDDEGTLISEMLTLTDLLGGRMERTEVYESKGRQYKKIVIEYDSKEWKRNEV
Ga0209404_1070365833300027906MarineLSSIEHVATLLRSKMNEGDLIAELRTIAERLGGTMERIDGYKSEGSQYKKIVIEYDSKEWKRNEV
Ga0183757_100498263300029787MarineMNEGDLIAELLQITAELGGTMERVDGYKSEGRQYKKIVIEYDSKEWKRNEI
Ga0315331_1067650613300031774SeawaterNDSDLIEELRTITERLGGTMERIDGYKSEGRQYKKIVIEYDSQEWIRNEI
Ga0315326_1051167133300031775SeawaterMNEGDLIAELRTIAERLGGTMERIDGYKSEGSQYKKIVIEYDSKEWKRNEV


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