Metagenome / Metatranscriptome Family F096019

Basic Information
Family ID	F096019
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	40 residues
Representative Sequence	MDQHAQPGQPAPAESFPTDPTGLPEATRPALLELADGD
Number of Associated Samples	90
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	96.19 %
% of genes from short scaffolds (< 2000 bps)	87.62 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Most Common Taxonomy
Group	Bacteria (57.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (25.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.810 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.55% β-sheet: 0.00% Coil/Unstructured: 95.45%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF10604	Polyketide_cyc2	6.67
PF00196	GerE	6.67
PF13191	AAA_16	4.76
PF13602	ADH_zinc_N_2	1.90
PF03992	ABM	1.90
PF04185	Phosphoesterase	0.95
PF13188	PAS_8	0.95
PF12697	Abhydrolase_6	0.95
PF00881	Nitroreductase	0.95
PF08241	Methyltransf_11	0.95
PF13487	HD_5	0.95
PF00753	Lactamase_B	0.95
PF11716	MDMPI_N	0.95
PF14329	DUF4386	0.95
PF01965	DJ-1_PfpI	0.95
PF03861	ANTAR	0.95
PF01638	HxlR	0.95
PF06305	LapA_dom	0.95
PF16542	PNKP_ligase	0.95
PF00144	Beta-lactamase	0.95
PF01850	PIN	0.95
PF00211	Guanylate_cyc	0.95
PF01740	STAS	0.95
PF02583	Trns_repr_metal	0.95
PF01966	HD	0.95
PF01243	Putative_PNPOx	0.95
PF00440	TetR_N	0.95
PF00583	Acetyltransf_1	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.95
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.95
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	0.95
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.95
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.95
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.95
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.95
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	39.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.19 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2.86 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.95 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.95 %
Coriobacteriia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	3.81 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	1.90 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1.90 %
Eggerthellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales	0.95 %
Actinobacteria bacterium RBG_16_64_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_64_13	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.95 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.95 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.95 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	3.81 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	1.90 %
Iamiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	1.90 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.95 %
Eggerthellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae	0.95 %
Actinobacteria bacterium RBG_16_64_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_64_13	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Aquihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans	1.90 %
Jiangella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	1.90 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1.90 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.95 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.95 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.95 %
Adlercreutzia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae → Adlercreutzia	0.95 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Actinobacteria bacterium RBG_16_64_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_64_13	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
unclassified Aquihabitans	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans	1.90 %
Jiangella muralis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella muralis	1.90 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1.90 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	0.95 %
Geodermatophilaceae bacterium URHB0062	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	0.95 %
Adlercreutzia equolifaciens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae → Adlercreutzia → Adlercreutzia equolifaciens	0.95 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.95 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Actinobacteria bacterium RBG_16_64_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_64_13	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Aquihabitans sp. G128	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. G128	1.90 %
Jiangella muralis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella muralis	1.90 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1.90 %
Blastococcus sp. DSM 44272	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. DSM 44272	0.95 %
Geodermatophilaceae bacterium URHB0062	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	0.95 %
Adlercreutzia equolifaciens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae → Adlercreutzia → Adlercreutzia equolifaciens	0.95 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.95 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Actinobacteria bacterium RBG_16_64_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_64_13	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100286849	Not Available	500	Open in IMG/M
3300001431\|F14TB_101002694	All Organisms → cellular organisms → Bacteria → Terrabacteria group	774	Open in IMG/M
3300005167\|Ga0066672_10863899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	563	Open in IMG/M
3300005363\|Ga0008090_15048998	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005435\|Ga0070714_101824000	Not Available	594	Open in IMG/M
3300005587\|Ga0066654_10651620	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005764\|Ga0066903_100573545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1944	Open in IMG/M
3300005764\|Ga0066903_106927113	Not Available	588	Open in IMG/M
3300005764\|Ga0066903_108853764	Not Available	511	Open in IMG/M
3300005981\|Ga0081538_10021428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4718	Open in IMG/M
3300006169\|Ga0082029_1409122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	584	Open in IMG/M
3300006175\|Ga0070712_100691978	Not Available	869	Open in IMG/M
3300006854\|Ga0075425_102364973	Not Available	590	Open in IMG/M
3300009143\|Ga0099792_10907619	Not Available	583	Open in IMG/M
3300009147\|Ga0114129_10744184	Not Available	1256	Open in IMG/M
3300009545\|Ga0105237_11198934	Not Available	766	Open in IMG/M
3300009789\|Ga0126307_10047321	All Organisms → cellular organisms → Bacteria	3354	Open in IMG/M
3300009789\|Ga0126307_11081684	Not Available	648	Open in IMG/M
3300009837\|Ga0105058_1089839	Not Available	714	Open in IMG/M
3300010041\|Ga0126312_10182870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1462	Open in IMG/M
3300010041\|Ga0126312_10316611	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300010042\|Ga0126314_10554152	Not Available	837	Open in IMG/M
3300010043\|Ga0126380_10846724	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300010048\|Ga0126373_10419776	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300010140\|Ga0127456_1178069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	721	Open in IMG/M
3300010329\|Ga0134111_10462064	Not Available	552	Open in IMG/M
3300010358\|Ga0126370_10863425	Not Available	813	Open in IMG/M
3300010361\|Ga0126378_10705104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1121	Open in IMG/M
3300010366\|Ga0126379_13184132	Not Available	549	Open in IMG/M
3300010376\|Ga0126381_100314513	All Organisms → cellular organisms → Bacteria	2150	Open in IMG/M
3300010398\|Ga0126383_11759572	Not Available	708	Open in IMG/M
3300011000\|Ga0138513_100057953	Not Available	591	Open in IMG/M
3300012207\|Ga0137381_10248917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1545	Open in IMG/M
3300012355\|Ga0137369_10345909	Not Available	1088	Open in IMG/M
3300012356\|Ga0137371_10471385	Not Available	970	Open in IMG/M
3300012356\|Ga0137371_11035896	Not Available	620	Open in IMG/M
3300012360\|Ga0137375_10845448	Not Available	732	Open in IMG/M
3300012939\|Ga0162650_100012234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1134	Open in IMG/M
3300012955\|Ga0164298_11139005	Not Available	587	Open in IMG/M
3300016422\|Ga0182039_12206747	Not Available	508	Open in IMG/M
3300017966\|Ga0187776_11250448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella muralis	559	Open in IMG/M
3300017973\|Ga0187780_10238310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1272	Open in IMG/M
3300018465\|Ga0190269_12046816	Not Available	501	Open in IMG/M
3300018466\|Ga0190268_10304396	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300018476\|Ga0190274_13688127	Not Available	518	Open in IMG/M
3300021078\|Ga0210381_10118697	All Organisms → cellular organisms → Bacteria → Terrabacteria group	874	Open in IMG/M
3300021171\|Ga0210405_10926544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300021374\|Ga0213881_10273681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300021560\|Ga0126371_10491902	Not Available	1374	Open in IMG/M
3300021560\|Ga0126371_11519298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	797	Open in IMG/M
3300021560\|Ga0126371_11761926	Not Available	742	Open in IMG/M
3300021560\|Ga0126371_13428535	Not Available	535	Open in IMG/M
3300022467\|Ga0224712_10507429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella muralis	583	Open in IMG/M
3300025904\|Ga0207647_10478282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300025906\|Ga0207699_10000913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14125	Open in IMG/M
3300025906\|Ga0207699_11463093	Not Available	505	Open in IMG/M
3300025912\|Ga0207707_10085910	All Organisms → cellular organisms → Bacteria	2749	Open in IMG/M
3300025916\|Ga0207663_10041292	Not Available	2811	Open in IMG/M
3300026078\|Ga0207702_10394054	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300026790\|Ga0208710_107742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	513	Open in IMG/M
3300027577\|Ga0209874_1012734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2456	Open in IMG/M
3300027577\|Ga0209874_1021018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1852	Open in IMG/M
3300027873\|Ga0209814_10352493	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300027874\|Ga0209465_10181916	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300027961\|Ga0209853_1068356	Not Available	948	Open in IMG/M
3300028705\|Ga0307276_10083295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	755	Open in IMG/M
3300028771\|Ga0307320_10264392	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300028791\|Ga0307290_10307914	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300028796\|Ga0307287_10043842	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300028819\|Ga0307296_10387012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300028876\|Ga0307286_10023140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2012	Open in IMG/M
3300028881\|Ga0307277_10020338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2599	Open in IMG/M
3300028881\|Ga0307277_10430689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. G128	591	Open in IMG/M
3300028881\|Ga0307277_10480825	Not Available	557	Open in IMG/M
3300030619\|Ga0268386_10213247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1440	Open in IMG/M
3300031543\|Ga0318516_10113715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1538	Open in IMG/M
3300031547\|Ga0310887_10934805	Not Available	551	Open in IMG/M
3300031548\|Ga0307408_100855405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	829	Open in IMG/M
3300031549\|Ga0318571_10239595	Not Available	663	Open in IMG/M
3300031680\|Ga0318574_10469767	Not Available	736	Open in IMG/M
3300031720\|Ga0307469_11102346	Not Available	746	Open in IMG/M
3300031731\|Ga0307405_10037108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2926	Open in IMG/M
3300031731\|Ga0307405_12142596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_64_13	502	Open in IMG/M
3300031769\|Ga0318526_10445703	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300031778\|Ga0318498_10035278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2184	Open in IMG/M
3300031782\|Ga0318552_10165870	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300031852\|Ga0307410_10101456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2063	Open in IMG/M
3300031901\|Ga0307406_12147827	Not Available	501	Open in IMG/M
3300031903\|Ga0307407_11019682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300031903\|Ga0307407_11382940	Not Available	554	Open in IMG/M
3300031911\|Ga0307412_11838230	Not Available	558	Open in IMG/M
3300031939\|Ga0308174_11133972	Not Available	666	Open in IMG/M
3300031954\|Ga0306926_10450589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1585	Open in IMG/M
3300031995\|Ga0307409_100367301	Not Available	1363	Open in IMG/M
3300032002\|Ga0307416_100635348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1151	Open in IMG/M
3300032002\|Ga0307416_102062974	Not Available	672	Open in IMG/M
3300032005\|Ga0307411_11309111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. DSM 44272	660	Open in IMG/M
3300032009\|Ga0318563_10092329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1593	Open in IMG/M
3300032010\|Ga0318569_10147039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae → Adlercreutzia → Adlercreutzia equolifaciens	1083	Open in IMG/M
3300032054\|Ga0318570_10484437	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300032126\|Ga0307415_101569924	Not Available	631	Open in IMG/M
3300032174\|Ga0307470_10867795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. G128	706	Open in IMG/M
3300032805\|Ga0335078_12152117	Not Available	590	Open in IMG/M
3300032892\|Ga0335081_11414744	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.95%
Host-Associated	Host-Associated	19.05%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Plants	Host-Associated → Plants	19.05%
Aquatic	Environmental → Aquatic	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.19%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.90%
Freshwater	Environmental → Aquatic → Freshwater	0.95%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.95%
Roots	Host-Associated → Plants → Roots	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.19%
Loam	Environmental → Terrestrial → Soil → Loam	12.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.81%
Sand	Environmental → Terrestrial → Soil → Sand	3.81%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.95%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.95%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.81%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.90%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.95%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.95%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	12.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.71%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.81%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.90%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.90%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.95%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.95%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026790	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN607 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096019

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1002868491	3300000559	Soil	MHHDTQPDPAMPTESFPTDPTGLPEAGRPELLELAPG
F14TB_1010026942	3300001431	Soil	MHHDTGSDPAMPTESFPTDPTGLPEAGRPELLELAPG
Ga0066672_108638991	3300005167	Soil	MQQPVQPSQPIPGELFPTDPAGLPEATRPQLRELADGDVVELR
Ga0008090_150489983	3300005363	Tropical Rainforest Soil	MQHNAHSDSPMLAEFFPTDPSGLPEATRPELLELADGDDLHLR
Ga0070714_1018240001	3300005435	Agricultural Soil	MDQHAQPGQPGTAESFPTDPAGLPEATHPELLELADGDDL
Ga0066654_106516202	3300005587	Soil	MDQHAQPDPAASAESFPTDPAGLPEATRPALLELADGDD
Ga0066903_1005735451	3300005764	Tropical Forest Soil	MQQPSQPDRPAPAEFFPTDPAGLPEATRPELVELADGDGV
Ga0066903_1069271131	3300005764	Tropical Forest Soil	MQQHAQPAQPASAESFPTDPSGLPEAGPPALLELADGDEFHLRI
Ga0066903_1088537642	3300005764	Tropical Forest Soil	MQQPSQPDRANPAEFFPTDPTGLPEATRPQLLELAD
Ga0081538_100214281	3300005981	Tabebuia Heterophylla Rhizosphere	MSMHHHGQPDPLMATQSFPTDPSGLAEAGRPQLLELASGDTLKL
Ga0082029_14091223	3300006169	Termite Nest	MHHHTQSDPPMPAESFPTDPSGLPEAGRPQLLELAPGDTLELQ
Ga0070712_1006919781	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDQHAQPGQPASAESFPTDPTGLPEATRPALLELADGDDL
Ga0075425_1023649733	3300006854	Populus Rhizosphere	MDQHAQPGQPAPAESFPTDPTGLPEATRPALLELADGDDLHLQIG
Ga0099792_109076191	3300009143	Vadose Zone Soil	MDQHTYPGQAAPAESFPTDPTGLPEATRPALLELA
Ga0114129_107441841	3300009147	Populus Rhizosphere	MQRHTRSDSLATESFPTDPSGLPEAGRPPLLELAPGDTLDLKVGP
Ga0105237_111989341	3300009545	Corn Rhizosphere	MQQPTHPDRPVSAESFPTDPTGLPQATPPELQELAD
Ga0126307_100473211	3300009789	Serpentine Soil	MDHTQSDPLATESFPTDPSGLPEAGRPELLELADGDT
Ga0126307_110816841	3300009789	Serpentine Soil	MHHHTPADPMAIESFPTDPSGLPEAGRPQLLELAHGDSLDLEVGPLNASWES*
Ga0105058_10898392	3300009837	Groundwater Sand	MHHHTPPDPPMSAQSFPTDPSGLPEAGRPALLELA
Ga0126312_101828701	3300010041	Serpentine Soil	MHHDMQPDPAMPTESFPTDPSGLPEAGRPVLLELAHGTP*
Ga0126312_103166111	3300010041	Serpentine Soil	MDHTQSDPLATESFPTDPSGLPEAGRPELLELADGDTLE
Ga0126314_105541522	3300010042	Serpentine Soil	MHHDMQPDPAMPTESFPTDPTGLPEATRPELLELAPGDTLDL
Ga0126380_108467241	3300010043	Tropical Forest Soil	MQQHAHADSPMPAESFPTDPSGLPEATRPALVELADGDDLHLRITP
Ga0126373_104197763	3300010048	Tropical Forest Soil	MHKHAEPGETAPTESFPTDPTGLPEATRPALLELAD
Ga0127456_11780692	3300010140	Grasslands Soil	MDQHAQPDPAASAESFPTDPAGLPEATRPALLELADG
Ga0134111_104620641	3300010329	Grasslands Soil	MHHDTQPDPAMPTESFPTDPTGLPEATRPELLELAPGDTLEL
Ga0126370_108634253	3300010358	Tropical Forest Soil	MQQPTQPGRPLSTETFPTDPTGLPEATRPELLELADGG
Ga0126378_107051043	3300010361	Tropical Forest Soil	MQQHAHPGRPAPTEFFPTDPTGLPEATRPELLELA
Ga0126379_131841322	3300010366	Tropical Forest Soil	MIMQQPPQPDRPAPAEFFPTDPTGLPEATRPAVLELADGDAF
Ga0126381_1003145133	3300010376	Tropical Forest Soil	MQQHAHPGRPAPTEFFPTDPTGLPEATRPELLELADGDDL
Ga0126383_117595722	3300010398	Tropical Forest Soil	MQQHAQPGQQTSAESFPTDPSGLPEATRPALLELADGDAFDLRIG
Ga0138513_1000579531	3300011000	Soil	MHHHTQPDPLSTESFPTDPSGLPEAGRPQLLELAP
Ga0137381_102489171	3300012207	Vadose Zone Soil	MHQHAQPGQPTPAEVFPTDPSGLPEATRPALVELA
Ga0137369_103459091	3300012355	Vadose Zone Soil	MQHHARPDRPTPAESFPTDPTGLPEAGRPALLELAHGDT
Ga0137371_104713851	3300012356	Vadose Zone Soil	MIMQQPPQPDRPAQAEFFPTDPTGLPEATRPQLLELADGD
Ga0137371_110358962	3300012356	Vadose Zone Soil	MHQPPHPDRPTTAESFPTDPSGLPEAARPALLELADG
Ga0137375_108454481	3300012360	Vadose Zone Soil	MQHHTRPDQPTPAESFPTDPTGLPEAGRPALLELA
Ga0162650_1000122341	3300012939	Soil	MNHHPQPDPLATESFPTDPSGLPEAGRPQLLELAPGDTLELHVGPV
Ga0164298_111390051	3300012955	Soil	MQQPTHPDRPVSAESFPTDPTGLPEATPPELQELTDGDTF
Ga0182039_122067472	3300016422	Soil	MQHNAHSDSPTSAGAFPTDPTGLPEATRPALRELADGDDLD
Ga0187776_112504481	3300017966	Tropical Peatland	MDQHAQPGQPAPAESFPTDPSGLPEATRPAVLELGDGDAFDLR
Ga0187780_102383103	3300017973	Tropical Peatland	MQQHAPAGQPAPAEFFPTDPTGLPEATRPELIELASGDQVHLRI
Ga0190269_120468162	3300018465	Soil	MQHGRPDLPTPVESFPTDPSGLPEAGRPEVLELAHGD
Ga0190268_103043962	3300018466	Soil	MQHTPPDLPTPLESFPTDPSGLPEAGRPRMLELADG
Ga0190274_136881271	3300018476	Soil	MHHTQPDPLATDSFPTDPSGLPEAGRPQLLELGPGDTLDLQVG
Ga0210381_101186973	3300021078	Groundwater Sediment	MHHHTQPDPLATESFPTDLTGLPEATRPQQLELAPG
Ga0210405_109265441	3300021171	Soil	MDQHTYPGQAAPAESFPTDPSGLPEATRPELLAVADGGDLHL
Ga0213881_102736811	3300021374	Exposed Rock	MHQHAQPGPAAPAGSFPTDPAGLPEAARPAVLELADGDVLD
Ga0126371_104919021	3300021560	Tropical Forest Soil	MQQPAQPGPQASAESFPTDPSGLPEATRPALLELADGDPFDL
Ga0126371_115192983	3300021560	Tropical Forest Soil	MAKTTDQYTYPGQTAPAEFFPTDPSGLPEATRPALAELAD
Ga0126371_117619262	3300021560	Tropical Forest Soil	MQHNAHSDSPMLAESFPTDPSGLPEATRPEVLALADGDDLHLR
Ga0126371_134285351	3300021560	Tropical Forest Soil	MHQHAQPGQPAPGESFPTDPSGLPEATRPELLELA
Ga0224712_105074291	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MDQHAQPGQPASAESFPTDPTGLPEATRPALLELADGDDIHLQ
Ga0207647_104782822	3300025904	Corn Rhizosphere	VEHTRADSPMSAESFPTDPTGLPEARRTALVELADGAEL
Ga0207699_100009131	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MDQHAQPGQPAPAESFPTDPTGLPEATRPALLELADGDDLHLQI
Ga0207699_114630931	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MDQHAQPGQPAPAESFPTDPSGLPEATRPALLELADG
Ga0207707_100859101	3300025912	Corn Rhizosphere	MHQHAQPGQPASAESFPTDPSGLPAATRPELLELA
Ga0207663_100412921	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MDQHAQPGQPAPAESFPTDPTGLPEATRPALLELADGD
Ga0207702_103940543	3300026078	Corn Rhizosphere	MQQPTHPDRPVSAESFPTDPTGLPQATPPELQELA
Ga0208710_1077422	3300026790	Soil	MQHHTQPDPLGTESFPTDPSGLPEAGRPELLELAPGD
Ga0209874_10127344	3300027577	Groundwater Sand	MQHHTRPDLPTPVESFPTDPSGLPEAGRPALLELANGDTLDLQVG
Ga0209874_10210183	3300027577	Groundwater Sand	MYHHTQPDPLATESFPTDPSGLPEAGRPALLELANGDTLDLQVG
Ga0209814_103524932	3300027873	Populus Rhizosphere	MHHHTQPDPLATESFPTDPSGLPGAGRSQLLELAPGDTLELRVG
Ga0209465_101819161	3300027874	Tropical Forest Soil	MQQHAHPGRPAPTEFFPTDPTGLPEATRPELLELADGD
Ga0209853_10683562	3300027961	Groundwater Sand	MYHHTQPDPLATESFPTDPSGLPEAGRPALLELANGDTLDLQ
Ga0307276_100832951	3300028705	Soil	VDHHSAHGSPGLAESFPTDPTGLPEATGPALVELA
Ga0307320_102643921	3300028771	Soil	MDHTRPDPTATESFPTDPSGLPEAGRPELLELADGETLELR
Ga0307290_103079142	3300028791	Soil	MKHHTRPDPASPESFPTDPSGLPEAGRPQLLELADGDTLE
Ga0307287_100438423	3300028796	Soil	MQHHTRPDPTSPESFPTDPSGLPEAGRPQLLELAD
Ga0307302_101286901	3300028814	Soil	MQHHARPDSSEPDSFPTDPSGLPEATRPQVVELADGDVL
Ga0307296_103870121	3300028819	Soil	MQQRPQPDAVTPSESFPTDPTGLPEATRPEVLELAP
Ga0307286_100231401	3300028876	Soil	MQHHTRPDPTSPEPFPTDPSGLPEAGRPQLLELAPGDT
Ga0307277_100203381	3300028881	Soil	MDRHAQPGQPAPAESFPTDPTGLPEATRPALLELAD
Ga0307277_104306892	3300028881	Soil	MQHGRPDLPTPVESFPTDPSGLPEAGRPEVLELGH
Ga0307277_104808251	3300028881	Soil	MQHHTQRDPLATESFPTDPSGLPEAGRPQLLELAPGDTLDLGVGPVA
Ga0268386_102132471	3300030619	Soil	MQHVAQHDVPTPSTTFPTDPSGLPEATRPALLELAEDDVFD
Ga0318516_101137153	3300031543	Soil	MHQHAQPGETTPAESFPTDPSGLPEATRPALRELADGDDLD
Ga0310887_109348051	3300031547	Soil	MQQPTYPDRPVSAESFPTDPTGLPEATPPELQELADGDTF
Ga0307408_1008554052	3300031548	Rhizosphere	MHHHTPADPMAIESFPTDPSGLPEAGRPQLLELAHGETLDLEV
Ga0318571_102395951	3300031549	Soil	MQHNAHSDSPTSAGAFPTDPTGLPEATCPALLELA
Ga0318574_104697672	3300031680	Soil	MHQHAQPGETTPAESFPTDPSGLPEATRPALRELADG
Ga0307469_111023461	3300031720	Hardwood Forest Soil	MQQPTHPDQPVSAESFPTDPTGLPEATPPELQKLADGDTFD
Ga0307405_100371081	3300031731	Rhizosphere	MHHDMQPDPAMPTESFPTDPSGLPEAGRPVLLELAHGTP
Ga0307405_121425961	3300031731	Rhizosphere	MHHHTAHESPGPAESFPTDPTGLPEATRPAVVELAVDDQLD
Ga0318526_104457032	3300031769	Soil	MQQHAHPGRPTPAEFFPTDPTGLPEATPTELLELA
Ga0318498_100352783	3300031778	Soil	MQQHADPGRPAPAEFFPTDPTGLPKATRPELLELAN
Ga0318552_101658701	3300031782	Soil	MQQHADPGRPAPAEFFPTDPTGLPEATRPELLELANG
Ga0307410_101014561	3300031852	Rhizosphere	MQHHIDHDQPDRFPTDPSGLPEAGRPVLLELAHGDTLKLDIGPVASGWVTAWCG
Ga0307406_121478271	3300031901	Rhizosphere	MHHHTQPDPLATESFPTDPSGLPEAGRPQLLELAPGD
Ga0307407_110196821	3300031903	Rhizosphere	VHHQTAHSSPGPAESFPTDPTGLPEATRPTLVELADGDQL
Ga0307407_113829402	3300031903	Rhizosphere	MHHHTRPDPAMPTESFPTDPVGLPEAGRPEVLSWPR
Ga0307412_118382301	3300031911	Rhizosphere	MHHDTQPDPAMPTESFPSDPTGLPEATRPELLELAPGDT
Ga0308174_111339722	3300031939	Soil	MDQHAQPDPAALAESFPTDPAGLPEATRPALLELA
Ga0306926_104505891	3300031954	Soil	MQQHARPDSPMSAEFFPTDPTGLPEATRPELLDLADG
Ga0307409_1003673013	3300031995	Rhizosphere	MHHDMQPDPAMPTESFPTDPSGLPEAGRPVLLELAHGDTLKLDIGPV
Ga0307416_1006353483	3300032002	Rhizosphere	MHHHTQRDPAMAAESFPTDPAGLPEAGRPQLLVLASGDTL
Ga0307416_1020629741	3300032002	Rhizosphere	MQYDTQPDPAMATESFPTDPSGLPEAGRPELLELAPGGTLELQVGPVAK
Ga0307411_113091111	3300032005	Rhizosphere	MHHHTPADPMAIESFPTDPSGLPEAGRPQLLELAHGDTLDLEVGPLA
Ga0318563_100923293	3300032009	Soil	MQQHADPGRPAPAEFFPTDPTGLPEATRPELLELANGDDLRLR
Ga0318569_101470392	3300032010	Soil	MHQHAQPGETTPAESFPTDPSGLPEATRPALRELADGDDLDLRL
Ga0318570_104844372	3300032054	Soil	MQQHARPDSPMSAEFFPTDPTGLPEATRPELLDLADGGEMHLRV
Ga0307415_1015699241	3300032126	Rhizosphere	MHHHIQPDPLATESFPSDPTGLPEATRPELLELAPG
Ga0307470_108677952	3300032174	Hardwood Forest Soil	MQHGRPDLPTPVESFPTDPSGLPEAGRPEVLELGHGDTLPLRVG
Ga0335078_121521171	3300032805	Soil	MDQHTYPGQAAPSGSFPTDPAGLPEATRPALLELADGDELHL
Ga0335081_114147441	3300032892	Soil	MHTQAQPGQPASAEFFPTDPSGLPEATRPALLELADGDEFHLRI

Hidden Markov Model


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