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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F095991 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 105 |
| Average Sequence Length | 114 residues |
| Representative Sequence | VRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEA |
| Number of Associated Samples | 85 |
| Number of Associated Scaffolds | 105 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 55.77 % |
| % of genes near scaffold ends (potentially truncated) | 40.95 % |
| % of genes from short scaffolds (< 2000 bps) | 81.90 % |
| Associated GOLD sequencing projects | 77 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (60.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (15.238 % of family members) |
| Environment Ontology (ENVO) | Unclassified (36.190 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (48.571 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
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| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 51.72% β-sheet: 7.76% Coil/Unstructured: 40.52% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 105 Family Scaffolds |
|---|---|---|
| PF04392 | ABC_sub_bind | 9.52 |
| PF02660 | G3P_acyltransf | 2.86 |
| PF06078 | DUF937 | 2.86 |
| PF06559 | DCD | 1.90 |
| PF03734 | YkuD | 1.90 |
| PF13147 | Obsolete Pfam Family | 0.95 |
| PF00440 | TetR_N | 0.95 |
| PF00589 | Phage_integrase | 0.95 |
| PF01979 | Amidohydro_1 | 0.95 |
| PF12071 | DUF3551 | 0.95 |
| PF13279 | 4HBT_2 | 0.95 |
| PF00582 | Usp | 0.95 |
| PF08207 | EFP_N | 0.95 |
| PF03411 | Peptidase_M74 | 0.95 |
| PF08241 | Methyltransf_11 | 0.95 |
| PF02771 | Acyl-CoA_dh_N | 0.95 |
| PF03401 | TctC | 0.95 |
| COG ID | Name | Functional Category | % Frequency in 105 Family Scaffolds |
|---|---|---|---|
| COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 9.52 |
| COG0344 | Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase | Lipid transport and metabolism [I] | 2.86 |
| COG3753 | Uncharacterized conserved protein YidB, DUF937 family | Function unknown [S] | 2.86 |
| COG0717 | dCTP deaminase | Nucleotide transport and metabolism [F] | 1.90 |
| COG1376 | Lipoprotein-anchoring transpeptidase ErfK/SrfK | Cell wall/membrane/envelope biogenesis [M] | 1.90 |
| COG3034 | Murein L,D-transpeptidase YafK | Cell wall/membrane/envelope biogenesis [M] | 1.90 |
| COG0231 | Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) | Translation, ribosomal structure and biogenesis [J] | 0.95 |
| COG1960 | Acyl-CoA dehydrogenase related to the alkylation response protein AidB | Lipid transport and metabolism [I] | 0.95 |
| COG3181 | Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC | Energy production and conversion [C] | 0.95 |
| COG3770 | Murein endopeptidase MepA (D-alanyl-D-alanine-endopeptidase) | Cell wall/membrane/envelope biogenesis [M] | 0.95 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 60.00 % |
| All Organisms | root | All Organisms | 40.00 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300000156|NODE_c0740273 | All Organisms → cellular organisms → Bacteria | 13050 | Open in IMG/M |
| 3300000364|INPhiseqgaiiFebDRAFT_100393630 | Not Available | 755 | Open in IMG/M |
| 3300000787|JGI11643J11755_11371075 | Not Available | 569 | Open in IMG/M |
| 3300004479|Ga0062595_100004750 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3804 | Open in IMG/M |
| 3300004479|Ga0062595_100160619 | Not Available | 1325 | Open in IMG/M |
| 3300005163|Ga0066823_10012102 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1236 | Open in IMG/M |
| 3300005165|Ga0066869_10006766 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1466 | Open in IMG/M |
| 3300005168|Ga0066809_10031690 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1121 | Open in IMG/M |
| 3300005328|Ga0070676_10009033 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 5393 | Open in IMG/M |
| 3300005329|Ga0070683_100274249 | All Organisms → cellular organisms → Bacteria | 1604 | Open in IMG/M |
| 3300005332|Ga0066388_100376014 | All Organisms → cellular organisms → Bacteria | 2067 | Open in IMG/M |
| 3300005332|Ga0066388_100573737 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1755 | Open in IMG/M |
| 3300005332|Ga0066388_101087101 | Not Available | 1352 | Open in IMG/M |
| 3300005332|Ga0066388_102523479 | Not Available | 935 | Open in IMG/M |
| 3300005338|Ga0068868_100065842 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 2879 | Open in IMG/M |
| 3300005339|Ga0070660_100132637 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1994 | Open in IMG/M |
| 3300005347|Ga0070668_100447712 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1110 | Open in IMG/M |
| 3300005354|Ga0070675_100843838 | Not Available | 838 | Open in IMG/M |
| 3300005354|Ga0070675_101932755 | Not Available | 544 | Open in IMG/M |
| 3300005457|Ga0070662_100760963 | Not Available | 822 | Open in IMG/M |
| 3300005564|Ga0070664_100032460 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 4368 | Open in IMG/M |
| 3300005616|Ga0068852_100652108 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1060 | Open in IMG/M |
| 3300005713|Ga0066905_100182078 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1551 | Open in IMG/M |
| 3300005713|Ga0066905_102018538 | Not Available | 535 | Open in IMG/M |
| 3300005764|Ga0066903_101219850 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7 | 1398 | Open in IMG/M |
| 3300005764|Ga0066903_101781082 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis | 1176 | Open in IMG/M |
| 3300005764|Ga0066903_102544960 | Not Available | 991 | Open in IMG/M |
| 3300005841|Ga0068863_100136336 | Not Available | 2345 | Open in IMG/M |
| 3300005937|Ga0081455_10110289 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2188 | Open in IMG/M |
| 3300006049|Ga0075417_10234377 | Not Available | 876 | Open in IMG/M |
| 3300006172|Ga0075018_10465816 | Not Available | 653 | Open in IMG/M |
| 3300006173|Ga0070716_100638257 | All Organisms → cellular organisms → Bacteria | 806 | Open in IMG/M |
| 3300006854|Ga0075425_100061405 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 4217 | Open in IMG/M |
| 3300006871|Ga0075434_100575937 | Not Available | 1145 | Open in IMG/M |
| 3300006904|Ga0075424_100016872 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 7402 | Open in IMG/M |
| 3300006954|Ga0079219_12442830 | Not Available | 508 | Open in IMG/M |
| 3300006969|Ga0075419_10413517 | Not Available | 926 | Open in IMG/M |
| 3300009011|Ga0105251_10120455 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1192 | Open in IMG/M |
| 3300009094|Ga0111539_11647862 | Not Available | 744 | Open in IMG/M |
| 3300009100|Ga0075418_11990848 | Not Available | 633 | Open in IMG/M |
| 3300009101|Ga0105247_10017367 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 4320 | Open in IMG/M |
| 3300009168|Ga0105104_10411365 | Not Available | 753 | Open in IMG/M |
| 3300009553|Ga0105249_10045822 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 3979 | Open in IMG/M |
| 3300009792|Ga0126374_10717168 | Not Available | 754 | Open in IMG/M |
| 3300010043|Ga0126380_12047905 | Not Available | 525 | Open in IMG/M |
| 3300010047|Ga0126382_10127011 | Not Available | 1704 | Open in IMG/M |
| 3300010048|Ga0126373_10335530 | Not Available | 1519 | Open in IMG/M |
| 3300010048|Ga0126373_10708527 | Not Available | 1065 | Open in IMG/M |
| 3300010358|Ga0126370_10004922 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 6648 | Open in IMG/M |
| 3300010360|Ga0126372_10773993 | Not Available | 947 | Open in IMG/M |
| 3300010360|Ga0126372_11310255 | Not Available | 753 | Open in IMG/M |
| 3300010360|Ga0126372_12059388 | Not Available | 618 | Open in IMG/M |
| 3300010362|Ga0126377_10347329 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7 | 1479 | Open in IMG/M |
| 3300010362|Ga0126377_12966532 | Not Available | 547 | Open in IMG/M |
| 3300010396|Ga0134126_11498138 | Not Available | 744 | Open in IMG/M |
| 3300010397|Ga0134124_10232445 | Not Available | 1688 | Open in IMG/M |
| 3300010398|Ga0126383_10416796 | All Organisms → cellular organisms → Bacteria | 1384 | Open in IMG/M |
| 3300010400|Ga0134122_10923268 | Not Available | 847 | Open in IMG/M |
| 3300011119|Ga0105246_12422253 | Not Available | 515 | Open in IMG/M |
| 3300012484|Ga0157333_1028102 | Not Available | 544 | Open in IMG/M |
| 3300012501|Ga0157351_1062826 | Not Available | 515 | Open in IMG/M |
| 3300012948|Ga0126375_10564003 | Not Available | 862 | Open in IMG/M |
| 3300012957|Ga0164303_10488543 | All Organisms → cellular organisms → Bacteria | 785 | Open in IMG/M |
| 3300012958|Ga0164299_10392643 | Not Available | 888 | Open in IMG/M |
| 3300012971|Ga0126369_11057428 | Not Available | 900 | Open in IMG/M |
| 3300012984|Ga0164309_10864233 | All Organisms → cellular organisms → Bacteria | 734 | Open in IMG/M |
| 3300013105|Ga0157369_12476552 | Not Available | 525 | Open in IMG/M |
| 3300013296|Ga0157374_10611762 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1100 | Open in IMG/M |
| 3300013306|Ga0163162_11313240 | Not Available | 822 | Open in IMG/M |
| 3300013308|Ga0157375_10855589 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1056 | Open in IMG/M |
| 3300013308|Ga0157375_11042860 | Not Available | 956 | Open in IMG/M |
| 3300015371|Ga0132258_11004540 | Not Available | 2108 | Open in IMG/M |
| 3300015371|Ga0132258_13064686 | Not Available | 1156 | Open in IMG/M |
| 3300015374|Ga0132255_101155694 | All Organisms → cellular organisms → Bacteria | 1165 | Open in IMG/M |
| 3300015374|Ga0132255_105509362 | Not Available | 536 | Open in IMG/M |
| 3300017944|Ga0187786_10269347 | Not Available | 684 | Open in IMG/M |
| 3300017947|Ga0187785_10040938 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1709 | Open in IMG/M |
| 3300017947|Ga0187785_10041834 | Not Available | 1693 | Open in IMG/M |
| 3300017947|Ga0187785_10136200 | All Organisms → cellular organisms → Bacteria | 1018 | Open in IMG/M |
| 3300017947|Ga0187785_10608321 | Not Available | 562 | Open in IMG/M |
| 3300018067|Ga0184611_1076404 | Not Available | 1144 | Open in IMG/M |
| 3300018072|Ga0184635_10027512 | Not Available | 2120 | Open in IMG/M |
| 3300018081|Ga0184625_10044633 | Not Available | 2208 | Open in IMG/M |
| 3300021560|Ga0126371_10003930 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 13058 | Open in IMG/M |
| 3300021560|Ga0126371_10483930 | Not Available | 1385 | Open in IMG/M |
| 3300025900|Ga0207710_10378577 | Not Available | 724 | Open in IMG/M |
| 3300025916|Ga0207663_10220675 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860 | 1379 | Open in IMG/M |
| 3300025926|Ga0207659_10843944 | Not Available | 787 | Open in IMG/M |
| 3300025926|Ga0207659_11566380 | Not Available | 563 | Open in IMG/M |
| 3300025927|Ga0207687_10700147 | Not Available | 860 | Open in IMG/M |
| 3300025933|Ga0207706_10158297 | All Organisms → cellular organisms → Bacteria | 1991 | Open in IMG/M |
| 3300025940|Ga0207691_11444259 | Not Available | 564 | Open in IMG/M |
| 3300025941|Ga0207711_12077069 | Not Available | 511 | Open in IMG/M |
| 3300025944|Ga0207661_10081721 | Not Available | 2670 | Open in IMG/M |
| 3300025945|Ga0207679_10184613 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1728 | Open in IMG/M |
| 3300025960|Ga0207651_10463227 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1089 | Open in IMG/M |
| 3300026118|Ga0207675_102117876 | Not Available | 579 | Open in IMG/M |
| 3300026684|Ga0207556_101894 | Not Available | 550 | Open in IMG/M |
| 3300027873|Ga0209814_10186889 | Not Available | 893 | Open in IMG/M |
| 3300027907|Ga0207428_11044842 | Not Available | 573 | Open in IMG/M |
| 3300028381|Ga0268264_10418816 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1291 | Open in IMG/M |
| 3300031114|Ga0308187_10257879 | Not Available | 637 | Open in IMG/M |
| 3300031740|Ga0307468_100292776 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1176 | Open in IMG/M |
| 3300034817|Ga0373948_0028702 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1109 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 15.24% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 8.57% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 8.57% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 5.71% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.76% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 4.76% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 4.76% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 4.76% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 3.81% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 2.86% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.86% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.86% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.86% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.86% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.86% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.86% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.90% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.90% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.90% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.90% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 0.95% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.95% |
| Unplanted Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil | 0.95% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.95% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.95% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.95% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.95% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.95% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.95% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.95% |
| Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.95% |
| Sugar Cane Bagasse Incubating Bioreactor | Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor | 0.95% |
| Visualization |
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000156 | Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic | Engineered | Open in IMG/M |
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000787 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300005163 | Soil and rhizosphere microbial communities from Laval, Canada - mgHMB | Environmental | Open in IMG/M |
| 3300005165 | Soil and rhizosphere microbial communities from Laval, Canada - mgHMC | Environmental | Open in IMG/M |
| 3300005168 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC | Environmental | Open in IMG/M |
| 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
| 3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
| 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
| 3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
| 3300006172 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014 | Environmental | Open in IMG/M |
| 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
| 3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
| 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Host-Associated | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
| 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009168 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 | Environmental | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
| 3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
| 3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300012484 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510 | Environmental | Open in IMG/M |
| 3300012501 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610 | Environmental | Open in IMG/M |
| 3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
| 3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
| 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Host-Associated | Open in IMG/M |
| 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300017944 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG | Environmental | Open in IMG/M |
| 3300017947 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG | Environmental | Open in IMG/M |
| 3300018067 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex | Environmental | Open in IMG/M |
| 3300018072 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2 | Environmental | Open in IMG/M |
| 3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026684 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-HINK08-E (SPAdes) | Environmental | Open in IMG/M |
| 3300027873 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300031114 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| 3300034817 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 | Host-Associated | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| NODE_074027320 | 3300000156 | Sugar Cane Bagasse Incubating Bioreactor | VRIACKIIPSGYATVVRDYARGNLDEAEFWSELTALGYSSLEIEWHIGNPGKRLDVRGTQMDEELKDLFFGAIGNLPAERQVAAQRWLKERVVLAKIAEQLIADAGAELPPELQGA* |
| INPhiseqgaiiFebDRAFT_1003936301 | 3300000364 | Soil | VYITRKIIPADYATFVRDYARGNLDEAELWDELTTLGYSSSEIEWHIANPGRCWGSKGAQMDEELKDLFFGAIGNFPPERQNAAQRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| JGI11643J11755_113710752 | 3300000787 | Soil | TFVRDYARGNLDEAELWDELTTLGYSSSEIEWHIANPGRCWGSKGAQMDEELKDLFFGAIGNFPPERQNAAQRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0062595_1000047503 | 3300004479 | Soil | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYSALEIEWHIANPGKRLDVRGTQMDEELKNLFFGAIEHFPLERQGAAQRWLKERVVLAKVAEQLISDAEAELPPELQQA* |
| Ga0062595_1001606191 | 3300004479 | Soil | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYGSLEIEWHIANPGKRLDVRGTQMDEELKDLFFGAIGNFPAERQGAAQRWLKERVILAKIAEQLIADAGAELPPELHGA* |
| Ga0066823_100121023 | 3300005163 | Soil | GRVRINCKIIPSGHATVVREYARGNLDEAEFSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0066869_100067661 | 3300005165 | Soil | RDLFCRIPVWRNKILPVFSPVMRQGAGRVRINCKIIPSGHATVVREYARGNLDEAEFSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0066809_100316903 | 3300005168 | Soil | VRINCKIIPSGHATVVREYARGNLDEAEFSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0070676_100090333 | 3300005328 | Miscanthus Rhizosphere | VRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0070683_1002742492 | 3300005329 | Corn Rhizosphere | VRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0066388_1003760142 | 3300005332 | Tropical Forest Soil | VYITRKIIPADYATFVRDYARGNLDEAELWEELNTLGYSPSEIEWHIANPGRCLGSKGAQMDEELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADAGAELPAELN* |
| Ga0066388_1005737372 | 3300005332 | Tropical Forest Soil | VYITRIIIPLDYATFVRDYARGNLDEAELWEELNTLGYSPSEIEWHIANPGRCLGSKGAQMDEELKDLFFGAIGNFPPERQDAAKSWLKERVILAKVAEQLIADAGAELPPELQEA* |
| Ga0066388_1010871013 | 3300005332 | Tropical Forest Soil | VGTWGQLYIRRKIIPSDYATFVRDYARGNLDEAELWEELATLGYSSSEIEWHFANPGQCLGSKGAQMDDELKSLFFGAIGNFPPERQDAAQRWLRERVVLAKVAEQLISDAGAELPPELQEA* |
| Ga0066388_1025234792 | 3300005332 | Tropical Forest Soil | MRRGVGQVRIARKIIPSGYATVVRDYARGNLDEAEFWSELTVLGFISLEIEWHIANPGKRLDVRGTQMDEELKNLFFGAIEHFPLERQVAAQRWLKERVVLAKVAEQLIADAGAEMPSELQSA* |
| Ga0070682_1000373267 | 3300005337 | Corn Rhizosphere | VRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVL |
| Ga0068868_1000658422 | 3300005338 | Miscanthus Rhizosphere | MRQGAGRVRINCKIIPSGHATVVREYARGNLDEAEFSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0070660_1001326374 | 3300005339 | Corn Rhizosphere | RINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0070668_1004477123 | 3300005347 | Switchgrass Rhizosphere | MRQGAGRVRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0070675_1008438381 | 3300005354 | Miscanthus Rhizosphere | GNLDEAEFWSELTALGYGSLEIEWHIANPGKRLDVRGTQMDEELKDLFFGAIGNFPAERQGAAQRWLKERVILAKIAEQLIADAGAELPPELHGA* |
| Ga0070675_1019327551 | 3300005354 | Miscanthus Rhizosphere | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYSALEIEWHIANPGKRLDVRGTQMDEELKNLFFEAIEHFPLERQGAAQRWLKERVVLAKVAEQLISDAEA |
| Ga0070662_1007609631 | 3300005457 | Corn Rhizosphere | VRINCKIIPSGHAIVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0070664_1000324602 | 3300005564 | Corn Rhizosphere | VRINCKIIPSGHATVVREYARGNLDEAEFSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0068852_1006521081 | 3300005616 | Corn Rhizosphere | VRINCKIIPSGHGTVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0066905_1001820781 | 3300005713 | Tropical Forest Soil | VYITRKIIPSDYATFVRDYARGYLDEAELWEELTTLGYSSSEIEWHIANLGRCWGSKGAQMDDELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0066905_1020185381 | 3300005713 | Tropical Forest Soil | LSLFASISPKFCLPFVLYEVGRGQLYITRKIIPSDYATFVRDYARGNLDEAELWEELTTLGYSSSEIEWHIANPGRYLGSKGAQMDEELKDLFFGAIPLERQVAAHRWLKERVVPAKVGEQLIADTGAELPPELQKA* |
| Ga0066903_1012198502 | 3300005764 | Tropical Forest Soil | VRIACKIIPSGYATVVRDYARGNLDEAEFWSELTALGYSSLEIEWHIGNPGKRLDVRGTQMDEELKNLFFGAIGNLPAERQVAAQRWLKERVVLAKIAEQLIADAGAELPPELQGA* |
| Ga0066903_1017810823 | 3300005764 | Tropical Forest Soil | YARGNLDEAELWTELSALGFNSTEVEWHIANPGKCSALRGSQMDEELKSFFFSSIEQLPLERQSAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0066903_1025449601 | 3300005764 | Tropical Forest Soil | SHQNFACLLSFMSRYGGQVYITRKIIPADYATFVRDYARGNLDEAELWEELNTLGYSPSEIEWHIANPGRCLGSKGAQMDEELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADAGAELPAELN* |
| Ga0068863_1001363363 | 3300005841 | Switchgrass Rhizosphere | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYGSLEIEWHIANPGKRLDVRGTQMDEELKDLFFGAIGNFPAERQGAAQRWLKERVILAKIAEQLIADAGAELPPELQGA* |
| Ga0081455_101102893 | 3300005937 | Tabebuia Heterophylla Rhizosphere | LFASVSSKFCLPFVLYEVGTGGQVYITRKIIPADYATFVRDYARGNLDEAELWEELTTLGYSACEIEWHIANPGRCLGSKGAQMDDELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADAGAELPAELQEA* |
| Ga0075417_102343771 | 3300006049 | Populus Rhizosphere | VYITRKIIPADYATFVRDYARGNLDEAELWEELTTLGYSSSEIEWHITNPGRCWGSKGAQMDEELKDLFFGAIGNFPTERQDAAQRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0075018_104658161 | 3300006172 | Watersheds | VRDYARGNLDEAELWEELTTLGYSSSKIEWHIANPGRCLGNKGAQMDEQLKDLFFGAIGNFPPEHQHAAQRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0070716_1006382571 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | QVRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYSALEIEWHIANPGKRLDVRGTQMDEELKNLFFGAIEHFPLERQGAAQRWLKERVVLAKVAEQLISDAEAELPPELQQA* |
| Ga0075425_1000614053 | 3300006854 | Populus Rhizosphere | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYSALEIEWHIANPGKRLDVRGTQMDEELKNLFFEAIEHFPLERQGAAQRWLKERVVLAKVAEQLISDAEAELPPELQQA* |
| Ga0075434_1005759372 | 3300006871 | Populus Rhizosphere | VVRDYARGNLDEAEFWSELTALGYGSLEIEWHIANPGKRLDVSGTQMDEELKDLFFGAIGNFPAERQGAAQRWLKERVILAKIAEQLIADAGAELPPELHGA* |
| Ga0075424_1000168727 | 3300006904 | Populus Rhizosphere | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYSALEIEWHIANPGKRLDVRGTQMDEELKNLFFGAIEHFPLERQGAAQRWLKERVVLAKVAEQLISDAEADLPPELQQA* |
| Ga0079219_124428301 | 3300006954 | Agricultural Soil | VRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSTLRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0075419_104135171 | 3300006969 | Populus Rhizosphere | VYITRKIIPADYATFVRDYARGNLDEAELWEELTTLGYSSSEIEWHITNPGRCWGSKGAQMDEELKDLFFGAIGNFPTERQDAAQRWLKERVVLAKVAEQLIADAGAGLPPELQEA* |
| Ga0105251_101204553 | 3300009011 | Switchgrass Rhizosphere | VREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0111539_116478622 | 3300009094 | Populus Rhizosphere | VREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0075418_119908481 | 3300009100 | Populus Rhizosphere | VYITRKIIPADYATFVRDYARGNLDEAELWEELTTLGYSSSEIEWHITNPGRCWGSKGAQMDEELKDLFFGAIGNFPTERQDAAQRWLKERVVLAKVAEQLIADAGAELPPEL |
| Ga0105247_100173678 | 3300009101 | Switchgrass Rhizosphere | VREYARGNLDEAEFSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0105104_104113651 | 3300009168 | Freshwater Sediment | VYITRKIIPSDYAAFVRDYARGNLDEAELWEELTTLGYSSSEIEWHIANPGRCWGSKGAQMDEELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADAGAELPPELQKA* |
| Ga0105249_100458226 | 3300009553 | Switchgrass Rhizosphere | VREYARGNLDEAEFSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0126374_107171682 | 3300009792 | Tropical Forest Soil | VYITRKIIPADYATFVRDYARGNLDEAELWEELNTLGYSPSEIEWHIANPGRCLGSKGAQMYEELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADAGAELPAELN* |
| Ga0126380_120479051 | 3300010043 | Tropical Forest Soil | LFASISPKFCLPFVLYEVGRGQLYITRKIIPSDYATFVRDYARGNLDEAELWEELTTLGYSSSEIEWHIANPGRYLGSKGAQMDEELKDLFFGAIPLERQVAAHRWLKERVVPAKVGEQLIADTGAELPPELQKA* |
| Ga0126382_101270112 | 3300010047 | Tropical Forest Soil | VYITRKIIPSDYATFVRDYARGNLDEAELWEELTALGYSSSEIEWHIANPGRYLGSKGAQMDEELKDLFFGAIGNFPLERQDAAQRWLKERVVLAKVAEQLIADAGAELPPELQKA* |
| Ga0126373_103355302 | 3300010048 | Tropical Forest Soil | MSAFGRKLMGSAFGAGSHQNFACLLSFMSRYGGQVYITRKIIPADYATFVRDYARGNLDEAELWGELNTLGYSPSEIEWHIANPGRCLGSKGAQMYEELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADAGAELPAELN* |
| Ga0126373_107085272 | 3300010048 | Tropical Forest Soil | GNLDEAEFWSELTAFGYSPLEIEWHIGNPGKRLDVRGTQMDEELKNLFFGAIGNLPAERQVAAQRWLKERVVLAKIAEQLIADAGAELPPELQGA* |
| Ga0126370_100049227 | 3300010358 | Tropical Forest Soil | VYITRKIIPADYATFVRDYARGNLDEAELWGELNTLGYSPSEIEWHIANPGRCLGSKGAQMDEELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADAGAELPAELN* |
| Ga0126372_107739931 | 3300010360 | Tropical Forest Soil | VYITRKIIPSDYATFVRDYARGNLDEAELWEELNTLGYSPSEIEWHIANPGRCLGSKGAQMDEELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADAGAELPAELN* |
| Ga0126372_113102552 | 3300010360 | Tropical Forest Soil | VRDYARGNLDEAELWEELNTLGYSPSEIEWHIANPGRCLGSKGAQMDEELKDLFFGAIGNFPPERQDAAKSWLKERVALAKVAEQLIADAGAELPPELQEA* |
| Ga0126372_120593881 | 3300010360 | Tropical Forest Soil | VREYARGNLDEAELWTELSALGFNSTEVEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQSAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0126377_103473291 | 3300010362 | Tropical Forest Soil | LFASISPKFCLPFVLYEVGRGQLYITRKIIPSDDATFVRDYARGNLDEAELWEELTTLGYRSSEIEWHIANPGRYLGSKGAQMDEELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADAG |
| Ga0126377_129665321 | 3300010362 | Tropical Forest Soil | DYARGNLDEAELWEELAALGYSSSEIEWHIANPGRCWGSKGAQMDEELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADAGAELPPELQKA* |
| Ga0134126_114981381 | 3300010396 | Terrestrial Soil | LDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0134124_102324451 | 3300010397 | Terrestrial Soil | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYGSLEIEWHIANPGKRLDVRGTQMDEELKDLFFGAIGNFPAERQGAAQRWLKERVILAKIAEQLIADAGAELPPELRGA* |
| Ga0126383_104167961 | 3300010398 | Tropical Forest Soil | YATFVRDYARGNLDEAELWGELNTLGYSPSEIEWHIANPGRCLGSKGAQMDEELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADAGAELPAELN* |
| Ga0134122_109232682 | 3300010400 | Terrestrial Soil | VRGYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0105246_124222531 | 3300011119 | Miscanthus Rhizosphere | VRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGTCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0157333_10281021 | 3300012484 | Soil | MRRGAGQARINGKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0157351_10628261 | 3300012501 | Unplanted Soil | RNLFCRIPSWRNKILPVFGPVMRRGAGQVRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV* |
| Ga0126375_105640031 | 3300012948 | Tropical Forest Soil | VYITRKIIPADYAAFVRDYARGNLDEAELWEELAALGYSPSEIEWHIANPGQCLGSKGAQMDEQLKDLFFGAIGNFPREHQDAAQRWLKERVALAKVAEQLIADAGAELPPELQEA* |
| Ga0164303_104885432 | 3300012957 | Soil | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYSALEIEWHIANPGKRLDVRGTQMDEELKNLFFGAIEHFPLERQGAAQRWLTERVVLAKVAEQLISDAEAELPPELQQA* |
| Ga0164299_103926431 | 3300012958 | Soil | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYSALEIEWHIANPGKRLDVRGTQMDEELKNLFFGAIEHFPLERQGAAQRWLKERVVLAKVAEQLISD |
| Ga0126369_110574281 | 3300012971 | Tropical Forest Soil | VRNYARGNLDEAEFWSELTALGYSPLEIEWHIGNPGKRLDVRGTQMDEELKNLFFGAIGNLPAERQVAAQRWLKERVVLAKIAEQLIADAGAELPPELQGA* |
| Ga0164309_108642331 | 3300012984 | Soil | IARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYSALEIEWHIANPGKRLDVRGTQMDEELKNLFFGAIEHFPLERQGAAQRWLKERVVLAKVAEQLISDAEAELPPELQQA* |
| Ga0157369_124765521 | 3300013105 | Corn Rhizosphere | MRRGAGQVRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0157374_106117621 | 3300013296 | Miscanthus Rhizosphere | VREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQ |
| Ga0163162_113132401 | 3300013306 | Switchgrass Rhizosphere | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYGSLEIEWHIANPGKRLDVRGTQMDEELKDLFFGAIGNFPAERQGAAQRWLKERVILAKIAEQLIADAGAELPPELHG |
| Ga0157375_108555891 | 3300013308 | Miscanthus Rhizosphere | VREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELP |
| Ga0157375_110428602 | 3300013308 | Miscanthus Rhizosphere | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYGSLEIEWHIANPGKRLDVRGTQMDEELKDLFFGAIGNFPAERQGAAQRWLKERVILAKIAEQLIADAGAELPPEL |
| Ga0132258_110045401 | 3300015371 | Arabidopsis Rhizosphere | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYGSLEIEWHLANPGRRLDVRGTQMDEELKSLFFGAIGNFPAERQVAAQRWLKERVVLAKIAEQLIADAGAELPPELQGA* |
| Ga0132258_130646861 | 3300015371 | Arabidopsis Rhizosphere | PVMRRGAGQVRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0132255_1011556943 | 3300015374 | Arabidopsis Rhizosphere | VREYARGNLDESELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEA* |
| Ga0132255_1055093621 | 3300015374 | Arabidopsis Rhizosphere | VYTTRKIIPSDYATFVRDYARGNLDEAELWEELTPLGYSPSEIEWHIANPGRCLGSKGAQMDDELKNLFFGAIGNFPPERQDAAQRWLKERVILAKVAEQLIADAGADLPPELQKA* |
| Ga0187786_102693472 | 3300017944 | Tropical Peatland | VRINCKIIPSGPATVVREYARGNLDEAELWTELSALGFSSTEIEWHIANPGKCLGLRGSQMDDELKSFFFSAIEQLPLERQGAAQRWLKERVVLAKVAEQLIADAGAELPPELQEV |
| Ga0187785_100409384 | 3300017947 | Tropical Peatland | VVSFVASCLGATKFCPCLVLLYDGERAVRINCKIIPSGPATVVREYARGNLDEAELWTELSALGFSSTEIEWHIANPGKCLGLRGSQMDDELKSFFFSAIEQLPLERQGAAQRWLKERVVLAKVAEQLIADAGAELPPELQEV |
| Ga0187785_100418342 | 3300017947 | Tropical Peatland | MSRYGGQVYITRKIIPADYATFVRDYARGNLDEAELWGELNTLGYSPSEIEWHIANPGRCLGSKGAQMYEELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADARAELPAEL |
| Ga0187785_101362001 | 3300017947 | Tropical Peatland | VRIACKIIPSGYATVVRDYARGNLDEAEFWSELTALGYSSPEIEWHIGNPGKRLDVRGTQMDEELKNLFFGAIGNLPAERQVAAQRWLKERVVLAKIAEQLIADAGAELPPELQGA |
| Ga0187785_106083212 | 3300017947 | Tropical Peatland | VYTTRKIIPSDYATIVRDYARGNLDEAELWTELSVLGFSPLDVEWHVANPGKRLVLRGSQMDEELKNLFFSAIDRFPPERQGAAQRWLKERVVLAKVAEQLIADAGAELPP |
| Ga0184611_10764042 | 3300018067 | Groundwater Sediment | GYGGQVYIKRKIIPSDYATFVRDYARGNLDEAELWEELTTLGYSSSEIEWHIANPGRCLESKGAQMDEQLRDLFFGAIGNFPPEHQDAAQRWLKERVVLAKVAEQLIADAGAELPPELQE |
| Ga0184635_100275124 | 3300018072 | Groundwater Sediment | VYIKRKIIPSDYATFVRDYARGNLDEAELWEELTTLDYSSSEIEWHIANPGRCLESKGAQMDEQLRDLFFGAIGNFPPEHQDAAQRWLKERVVLAKVAEQLIADAGAELPPELQEA |
| Ga0184625_100446332 | 3300018081 | Groundwater Sediment | VYIKRKIIPSDYAAFVRDYARGNLDEAELWEELTTLGYSSSEIEWHIANPGRCLESKGAQMDEQLRDLFFGAIGNFPPEHQDAAQRWLKERVVLAKVAEQLIADAGAELPPELQEA |
| Ga0126371_1000393012 | 3300021560 | Tropical Forest Soil | VYITRKIIPADYATFVRDYARGNLDEAELWGELNTLGYSPSEIEWHIANPGRCLGSKGAQMDEELKDLFFGAIGNFPPERQDAAQRWLKERVVLAKVAEQLIADAGAELPAELN |
| Ga0126371_104839302 | 3300021560 | Tropical Forest Soil | VRIACKIIPSGYATVVRDYARGNLDEAEFWSELTALGYSPLEIEWHIGNPGKRLDVRGTQMDEELKNLFFGAIGNLPAERQVAAQRWLKERVVLAKIAEQLIADAGAELPPELQGA |
| Ga0207710_103785772 | 3300025900 | Switchgrass Rhizosphere | VRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEA |
| Ga0207663_102206753 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | PSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV |
| Ga0207659_108439441 | 3300025926 | Miscanthus Rhizosphere | GNLDEAEFWSELTALGYGSLEIEWHIANPGKRLDVRGTQMDEELKDLFFGAIGNFPAERQGAAQRWLKERVILAKIAEQLIADAGAELPPELHGA |
| Ga0207659_115663801 | 3300025926 | Miscanthus Rhizosphere | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYSALEIEWHIANPGKRLDVRGTQMDEELKNLFFEAIEHFPLERQGAAQRWLKERVVLAKVAEQLISDAEADLPPEL |
| Ga0207687_107001472 | 3300025927 | Miscanthus Rhizosphere | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYGSLEIEWHIANPGKRLDVRGTQMDEELKDLFFGAIGNFPAERQGAAQRWLKERVILAKIAEQL |
| Ga0207706_101582972 | 3300025933 | Corn Rhizosphere | VRINCKIIPSGHAIVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEA |
| Ga0207691_114442592 | 3300025940 | Miscanthus Rhizosphere | MRQGAGRVRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV |
| Ga0207711_120770691 | 3300025941 | Switchgrass Rhizosphere | VRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAEL |
| Ga0207661_100817212 | 3300025944 | Corn Rhizosphere | VRIARKIIPSGYATVVRDYARGNLDEAEFWSELTALGYGSLEIEWHIANPGKRLDVRGTQMDEELKDLFFGAIGNFPAERQGAAQRWLKERVILAKIAEQLIADAGAELPPELQGA |
| Ga0207679_101846134 | 3300025945 | Corn Rhizosphere | VRINCKIIPSGHATVVREYARGNLDEAEFSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQAV |
| Ga0207651_104632271 | 3300025960 | Switchgrass Rhizosphere | GRVRINCKIIPSGHATVVREYARGNLDEAEFSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV |
| Ga0207675_1021178761 | 3300026118 | Switchgrass Rhizosphere | VRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLI |
| Ga0207556_1018941 | 3300026684 | Soil | INCKIIPSGHATVVREYARGNLDEAEFSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV |
| Ga0209814_101868892 | 3300027873 | Populus Rhizosphere | VYITRKIIPADYATFVRDYARGNLDEAELWEELTTLGYSSSEIEWHITNPGRCWGSKGAQMDEELKDLFFGAIGNFPTERQDAAQRWLKERVVLAKVAEQLIADAGAELPPELQEA |
| Ga0207428_110448421 | 3300027907 | Populus Rhizosphere | MRWVRGQVYITRKIIPADYATFVRDYARGNLDEAELWEELTTLGYSSSEIEWHITNPGRCWGSKGAQMDEELKDLFFGAIGNFPTERQDAAQRWLKERVVLAK |
| Ga0268264_104188163 | 3300028381 | Switchgrass Rhizosphere | MRRGAGQVRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV |
| Ga0308187_102578792 | 3300031114 | Soil | YIKRKIIPSDYAAFVLDYARGNLDEAELWEELTTLGYSSSEIEWHIANPGRCLESKGAQMDEQLRDLFFGAIGNFPPEHQDAAQRWLKERVVLAKVAEQLIADAGAELPPELQEA |
| Ga0307468_1002927763 | 3300031740 | Hardwood Forest Soil | INCQIIPSDHATVVREYARGNLDEAELWAELSALGFNSTEIEWHIANPGKCSALRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKVAEQLIADAGAELPPELQEV |
| Ga0373948_0028702_3_314 | 3300034817 | Rhizosphere Soil | MRRGAGQVRINCKIIPSGHATVVREYARGNLDEAELSTELSALGFNSTEIEWHIANPGKCSAPRGSQMDEELKSFFFSAIEQLPLERQGAALRWLKERVVLAKV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |