Metagenome Family F095989

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095989
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	77 residues
Representative Sequence	MFDPDRILDQILEIFVEYDNWLTFRNLAYRVTGDPSNQHVIAEVVHRHSRVFVVTDGCRCKLRTELIEDALQIAPLP
Number of Associated Samples	74
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.48 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	70.48 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.286 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (24.762 % of family members)
Environment Ontology (ENVO)	Unclassified (34.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.381 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.95% β-sheet: 9.52% Coil/Unstructured: 49.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13598	DUF4139	3.81
PF13229	Beta_helix	2.86
PF07366	SnoaL	1.90
PF13601	HTH_34	1.90
PF12681	Glyoxalase_2	1.90
PF01494	FAD_binding_3	1.90
PF13545	HTH_Crp_2	1.90
PF06983	3-dmu-9_3-mt	1.90
PF04831	Popeye	1.90
PF04389	Peptidase_M28	0.95
PF00561	Abhydrolase_1	0.95
PF00005	ABC_tran	0.95
PF00144	Beta-lactamase	0.95
PF01619	Pro_dh	0.95
PF02622	DUF179	0.95
PF13641	Glyco_tranf_2_3	0.95
PF13673	Acetyltransf_10	0.95
PF07676	PD40	0.95
PF12704	MacB_PCD	0.95
PF06739	SBBP	0.95
PF14026	DUF4242	0.95
PF07690	MFS_1	0.95
PF00085	Thioredoxin	0.95
PF13419	HAD_2	0.95
PF00378	ECH_1	0.95
PF07238	PilZ	0.95
PF13302	Acetyltransf_3	0.95
PF03544	TonB_C	0.95
PF07992	Pyr_redox_2	0.95
PF13646	HEAT_2	0.95
PF01546	Peptidase_M20	0.95
PF12680	SnoaL_2	0.95
PF14464	Prok-JAB	0.95
PF13847	Methyltransf_31	0.95
PF00731	AIRC	0.95
PF13561	adh_short_C2	0.95
PF13564	DoxX_2	0.95
PF01152	Bac_globin	0.95
PF11304	DUF3106	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.81
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.90
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.90
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.90
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	1.90
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	1.90
COG0506	Proline dehydrogenase	Amino acid transport and metabolism [E]	0.95
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1678	Putative transcriptional regulator, AlgH/UPF0301 family	Transcription [K]	0.95
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.95
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.95
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.95
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.95 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.62 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.67 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.90 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.95 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.67 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.90 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.95 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.62 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.90 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.95 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.95 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.95 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.95 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.62 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.90 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.95 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.95 %
Desulfofundulus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus	0.95 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.95 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.62 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.95 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.95 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.95 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.95 %
Desulfofundulus kuznetsovii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus kuznetsovii	0.95 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.62 %
Arthrobacter sp. KBS0703	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. KBS0703	0.95 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.95 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.95 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.95 %
Desulfofundulus kuznetsovii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus kuznetsovii	0.95 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16677153	All Organisms → cellular organisms → Bacteria → Acidobacteria	2098	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101110880	Not Available	596	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101528116	All Organisms → cellular organisms → Bacteria	2550	Open in IMG/M
3300000955\|JGI1027J12803_107342558	Not Available	672	Open in IMG/M
3300000955\|JGI1027J12803_107496839	Not Available	710	Open in IMG/M
3300001686\|C688J18823_10308977	Not Available	1036	Open in IMG/M
3300005332\|Ga0066388_100009754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7378	Open in IMG/M
3300005332\|Ga0066388_101401304	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300005434\|Ga0070709_10001105	All Organisms → cellular organisms → Bacteria	14872	Open in IMG/M
3300005526\|Ga0073909_10548143	Not Available	565	Open in IMG/M
3300005533\|Ga0070734_10001696	All Organisms → cellular organisms → Bacteria	30408	Open in IMG/M
3300005614\|Ga0068856_101614245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300005764\|Ga0066903_100159892	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3263	Open in IMG/M
3300005764\|Ga0066903_106776402	Not Available	595	Open in IMG/M
3300005874\|Ga0075288_1009094	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300005879\|Ga0075295_1040221	Not Available	609	Open in IMG/M
3300005888\|Ga0075289_1016209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. KBS0703	1036	Open in IMG/M
3300005890\|Ga0075285_1000763	All Organisms → cellular organisms → Bacteria	3206	Open in IMG/M
3300006028\|Ga0070717_10890981	Not Available	810	Open in IMG/M
3300006050\|Ga0075028_100237482	Not Available	996	Open in IMG/M
3300006052\|Ga0075029_100059773	Not Available	2221	Open in IMG/M
3300006052\|Ga0075029_100191164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1274	Open in IMG/M
3300006102\|Ga0075015_100516133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300006172\|Ga0075018_10471846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfofundulus → Desulfofundulus kuznetsovii	650	Open in IMG/M
3300006173\|Ga0070716_100025415	All Organisms → cellular organisms → Bacteria	3160	Open in IMG/M
3300006174\|Ga0075014_100239766	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300006176\|Ga0070765_102081027	Not Available	530	Open in IMG/M
3300006354\|Ga0075021_10201654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1214	Open in IMG/M
3300006854\|Ga0075425_101645595	Not Available	723	Open in IMG/M
3300009551\|Ga0105238_10915673	Not Available	896	Open in IMG/M
3300009645\|Ga0116106_1157071	Not Available	727	Open in IMG/M
3300010048\|Ga0126373_10020044	All Organisms → cellular organisms → Bacteria → Acidobacteria	5633	Open in IMG/M
3300010048\|Ga0126373_10293518	Not Available	1618	Open in IMG/M
3300010048\|Ga0126373_11164610	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300010048\|Ga0126373_11371403	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300010048\|Ga0126373_11542766	Not Available	729	Open in IMG/M
3300010358\|Ga0126370_11237193	Not Available	696	Open in IMG/M
3300010359\|Ga0126376_13172761	Not Available	509	Open in IMG/M
3300010360\|Ga0126372_11177100	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300010361\|Ga0126378_12090848	Not Available	646	Open in IMG/M
3300010361\|Ga0126378_12611897	Not Available	577	Open in IMG/M
3300010361\|Ga0126378_13101367	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300010366\|Ga0126379_13625786	Not Available	517	Open in IMG/M
3300010376\|Ga0126381_100127789	All Organisms → cellular organisms → Bacteria	3302	Open in IMG/M
3300010376\|Ga0126381_100384422	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300010376\|Ga0126381_100418412	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1872	Open in IMG/M
3300010376\|Ga0126381_101165427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300010376\|Ga0126381_102269235	Not Available	780	Open in IMG/M
3300010376\|Ga0126381_102400029	Not Available	757	Open in IMG/M
3300010398\|Ga0126383_13036411	Not Available	548	Open in IMG/M
3300012212\|Ga0150985_116693504	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300012948\|Ga0126375_10952121	Not Available	695	Open in IMG/M
3300012971\|Ga0126369_10385954	All Organisms → cellular organisms → Bacteria → Acidobacteria	1434	Open in IMG/M
3300012971\|Ga0126369_12540848	Not Available	597	Open in IMG/M
3300014501\|Ga0182024_10582474	Not Available	1405	Open in IMG/M
3300015371\|Ga0132258_10205999	Not Available	4774	Open in IMG/M
3300015372\|Ga0132256_101859438	Not Available	710	Open in IMG/M
3300017823\|Ga0187818_10227521	Not Available	814	Open in IMG/M
3300017927\|Ga0187824_10323743	Not Available	550	Open in IMG/M
3300017946\|Ga0187879_10678571	Not Available	573	Open in IMG/M
3300017959\|Ga0187779_10701695	Not Available	684	Open in IMG/M
3300017970\|Ga0187783_10011906	All Organisms → cellular organisms → Bacteria → Acidobacteria	6398	Open in IMG/M
3300017970\|Ga0187783_10114376	All Organisms → cellular organisms → Bacteria → Acidobacteria	1988	Open in IMG/M
3300017973\|Ga0187780_10746262	Not Available	707	Open in IMG/M
3300017975\|Ga0187782_10147263	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300018006\|Ga0187804_10030967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2011	Open in IMG/M
3300018007\|Ga0187805_10601895	Not Available	519	Open in IMG/M
3300018037\|Ga0187883_10140726	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1245	Open in IMG/M
3300018062\|Ga0187784_10106200	All Organisms → cellular organisms → Bacteria → Acidobacteria	2286	Open in IMG/M
3300018062\|Ga0187784_10290803	Not Available	1327	Open in IMG/M
3300018085\|Ga0187772_10011805	All Organisms → cellular organisms → Bacteria	4779	Open in IMG/M
3300020580\|Ga0210403_10020816	All Organisms → cellular organisms → Bacteria	5233	Open in IMG/M
3300020581\|Ga0210399_10102937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2337	Open in IMG/M
3300020581\|Ga0210399_10648237	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300021445\|Ga0182009_10005603	All Organisms → cellular organisms → Bacteria	3996	Open in IMG/M
3300021560\|Ga0126371_10308710	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300021560\|Ga0126371_10547130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1307	Open in IMG/M
3300021560\|Ga0126371_10763370	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300021560\|Ga0126371_13533516	Not Available	527	Open in IMG/M
3300025924\|Ga0207694_11274515	Not Available	622	Open in IMG/M
3300025928\|Ga0207700_10103260	Not Available	2278	Open in IMG/M
3300025939\|Ga0207665_10369556	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300027826\|Ga0209060_10000335	All Organisms → cellular organisms → Bacteria	96586	Open in IMG/M
3300027898\|Ga0209067_10845488	Not Available	536	Open in IMG/M
3300027911\|Ga0209698_10006053	All Organisms → cellular organisms → Bacteria	12920	Open in IMG/M
3300027911\|Ga0209698_10021096	All Organisms → cellular organisms → Bacteria	6168	Open in IMG/M
3300027911\|Ga0209698_10048705	All Organisms → cellular organisms → Bacteria → Acidobacteria	3731	Open in IMG/M
3300027911\|Ga0209698_10965978	Not Available	636	Open in IMG/M
3300027986\|Ga0209168_10000842	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	26943	Open in IMG/M
3300031231\|Ga0170824_103289014	Not Available	566	Open in IMG/M
3300031754\|Ga0307475_10455040	Not Available	1029	Open in IMG/M
3300031954\|Ga0306926_10948504	Not Available	1027	Open in IMG/M
3300031996\|Ga0308176_10303255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1557	Open in IMG/M
3300032174\|Ga0307470_10195480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1287	Open in IMG/M
3300032261\|Ga0306920_103067054	Not Available	629	Open in IMG/M
3300032770\|Ga0335085_10000241	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	170526	Open in IMG/M
3300032770\|Ga0335085_10169079	All Organisms → cellular organisms → Bacteria → Acidobacteria	2716	Open in IMG/M
3300032770\|Ga0335085_12072617	Not Available	575	Open in IMG/M
3300032783\|Ga0335079_10197199	Not Available	2236	Open in IMG/M
3300032783\|Ga0335079_10237931	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300032783\|Ga0335079_12286748	Not Available	514	Open in IMG/M
3300032828\|Ga0335080_10329964	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300032954\|Ga0335083_10087547	All Organisms → cellular organisms → Bacteria	3116	Open in IMG/M
3300033004\|Ga0335084_10072736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3562	Open in IMG/M
3300033004\|Ga0335084_10306218	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1642	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.33%
Host-Associated	Host-Associated	6.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.24%
Aquatic	Environmental → Aquatic	18.10%
Plants	Host-Associated → Plants	6.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.24%
Sediment	Environmental → Aquatic → Sediment	11.43%
Freshwater	Environmental → Aquatic → Freshwater	6.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.43%
Loam	Environmental → Terrestrial → Soil → Loam	10.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	20.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.95%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	24.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	11.43%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.81%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005879	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03746020	2088090014	Soil	MFDPDRILDQILEIFVEYDTWLTFRQLAYRLTGDPSNEHVIAEVVHQHGRVLVVNDGYRCRLRTELIEDAAQIASLP
INPhiseqgaiiFebDRAFT_1011108802	3300000364	Soil	VMLDADHILDQLLEVFIEYDNWLTLRQLAYRVTGDPSNQHEIAAVVYRHSRVFVVTDGRCKLRTELIEDVAQIAPQP*
INPhiseqgaiiFebDRAFT_1015281162	3300000364	Soil	MPVDPDLILDQILEVFVEYNNWLTFRQLAYRLTGDPSNESLIAEVVHQHGRVFIVDDGCRCRLLTVEDAAPIAS*
JGI1027J12803_1073425581	3300000955	Soil	MFDTDRILDQILEVFIEYDNWLTFRQLACRLTGETANEHVIAEVVHRHSRVLVVNDGCRCRLRTELIEDAAQIARLP*
JGI1027J12803_1074968392	3300000955	Soil	MLDADHILDQLLEVFIEYDNWLTLRQLAYRVTGDPSNQHEIAAVVYRHSRVFVVTDGR
C688J18823_103089771	3300001686	Soil	MFDPDHILDQILEIFVEYDTWLTFRQLAYRVTGDPSNQHLIAEVVHQHSRVFIVNDGCRCKLRTELIEDAEQIKLHDNG
Ga0066388_1000097546	3300005332	Tropical Forest Soil	MAADPELILDQILEVFVDYNNWLTFRQLAQRLTGDPANEHLMAEVVRQHGQVFVVNDGCRCRLRTIEDAAPIAS*
Ga0066388_1014013042	3300005332	Tropical Forest Soil	MPIDSDLILDQILEVFVDYNNWLTFRQLAQRLTGDPSNESLIAQVVHQHGRVFIVSDGCRCRLRTVEDAAPIAS*
Ga0070709_1000110513	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TIGGTGTPRMPADPDLILDQILEVFVDYNNWLTFRQLAQRITGDPSNEYLIAEVVQQHGSVFIVSDGCRCKLRSVEDAAPIAS*
Ga0073909_105481431	3300005526	Surface Soil	MFDPDRILDQILEIFVEYDTWLTFRQVAYRVTGDPANKDLIAEVVHRHSRVFVVNDGCRCKLRTELIEDAEQIAPPP*
Ga0070734_1000169631	3300005533	Surface Soil	MFDPDRILDQMLETFVEHNNWLTFRQLAYRLTGDPSNHQLIAGIVHRQGRVLMVTDGCRCKLRTDFIEDTVAPRL*
Ga0068856_1016142452	3300005614	Corn Rhizosphere	VMFHPDRLLDQMLEIFVEYDNWLTFRQLAYRVTGDLSDEHVIAEIVYRHNRVFVVNDGSRCKLRTELIEDAVRIEPHRNGLPNQW*
Ga0066903_1001598922	3300005764	Tropical Forest Soil	MAADPELILDQILEVFVDYNNWLTFRQLAQRLTGDPANEHVMAEVVRQHGQVFVVNDGCRCRLRTIEDAAPIAS*
Ga0066903_1067764021	3300005764	Tropical Forest Soil	MPVTSNLDRTLDLILEIFVEYDNWLTFRQLATRLTGDPSNEQLIAGIVDRHSGVLVVTDGCRCKLRTGFIQDPVSTRIDVNIRIPRKSCVAHTSA
Ga0075288_10090942	3300005874	Rice Paddy Soil	VYVMFHPDRLLDQVLEIFVEYDNWLTFRELAYRVTGDPSDQHVIAEIVRRHNRVFVVNEG
Ga0075295_10402211	3300005879	Rice Paddy Soil	VWVSARSPKRRTWVYVMFHPDRLLDQVLEIFVEYDNWLTFRELAYRVTGDPSDQHVIAEIVRRHNRVFVVNEGSRCKLRTELIEDAVQIAPRHNGLSNQLW*
Ga0075289_10162092	3300005888	Rice Paddy Soil	MFHPDRLLDQVLEIFVEYDNWLTFRELAYRVTGDPSDQHVIAEIVRRHNRVFVVNEGSRCKLRTELIEDAVQIAPRHNGLSNQLW*
Ga0075285_10007632	3300005890	Rice Paddy Soil	VYVMFHPDRLLDQVLEIFVEYDNWLTFRELAYRVTGDPSDQHVIAEIVRRHNRVFVVNEGSRCKLRTELIEDAVQIAPRHNGLSNQLW*
Ga0070717_108909811	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VMLDPDHILDQLLEVFIDYDNWLTFRQLAYRATGDPSNQDVIAAVVYRHSRV
Ga0075028_1002374822	3300006050	Watersheds	MFDTDRILDQILEIFIEYDNWLTFRQLACRLTGEPSNEHVIAEVVHRHSRVLVVNDGCRCRLRTELIEDAAQIALLP*
Ga0075029_1000597733	3300006052	Watersheds	MFDTDRILDQILEIFIEYDNWLTFRQLAYRLTGEPSNEHEIAEVVHRHSRVLVVNDGCRCRLRTELIEDAAQIALLP*
Ga0075029_1001911643	3300006052	Watersheds	MFDPDRILDQILETFIEHDNWLTFRQLAYRVTGDPSNQHVIAEVVYRHNRVFVVNDGCRCKLRTELIEDAVQIAPLP*
Ga0075015_1005161331	3300006102	Watersheds	MPVDPDPILDQILEIFVDYNNWLTFRQLAQRLTGDPSNEHMIAEVVREHDSVFIVEDSCRCKLRTIEDAAPIAS*
Ga0075018_104718461	3300006172	Watersheds	MFDLDRILDQILESFVEYDNWLTFRQLSYRVTGDPSNQHVIAEVVHRHSRVFVVNDGCRCKLRTELIEDAVQIAPYRDGPSD*
Ga0070716_1000254153	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VMLDPDHILDQLLEVFIDYDNWLTFRQLAYRATGDPSNQDVIAAVVYRHSRVFVVTDGRCKLRTELIEDVAQIAPQP*
Ga0075014_1002397662	3300006174	Watersheds	MFDLDRILDQILESFVEYDNWLTFRQLSYRVTGDPSNQHVIAEVVHRHSRVFVVNDGCRCKLRTELIEDAVQIAP
Ga0070765_1020810271	3300006176	Soil	VMSDPDRILDQILEIFVEYDNWLTFRQLANRVTGDPSNHHVIAEVVHRHSRVFVVSDGCRCKLRTELIEDALQIAPLL*
Ga0075021_102016541	3300006354	Watersheds	MFDTDRILDQILEIFIEYDNWLTFRQLAYRLTGEPSNEHVIAEVVHRHSRVLVVNDGCRCRLRTELIEDAAQCALLP*
Ga0075425_1016455951	3300006854	Populus Rhizosphere	VMFDPDHILDQLLEVFIDYDNWLTFRQLAYRATGDPSNQDVIAAVVYRHSRVFVVTDGRCKLRTELIED
Ga0105238_109156732	3300009551	Corn Rhizosphere	MFDPDRILDQILETFIEYDNWLTFRQLAYRVTGDPSNQHVIAEVVYRHSRVFDMNDGCRCKLRTELIEDAVQIARLT*
Ga0116106_11570712	3300009645	Peatland	MFDPDRMLDQILEIFVEYDNWLTFRQLAYRVTGDPSNQHVIAEVVHRHSQVFVVTDGCRCKLRTELIDDALQIAPLP*
Ga0126373_100200443	3300010048	Tropical Forest Soil	VTFNPDRILDQMLETFVEYNNWLTFRQLAYRLTGDPSNEKIIAEIVHRHSRIFMVTDGCRCKLRTDFIVDAVASRL*
Ga0126373_102935185	3300010048	Tropical Forest Soil	MSDPDRILDQILEIFVEYNNWLTFRQLARRVTGDPSDQHVIAEVVYRHSRVFVVTDGRCKLRTELIEDVAQIGPQ
Ga0126373_111646102	3300010048	Tropical Forest Soil	MPVTSNLDRTLDLILEIFVEYDNWLTFRQLATRLTGDPSNEQLIAGIVDRHSGVLVVTDGCRCKLRTGFIEDSARIAYRQQLSKPLS*
Ga0126373_113714032	3300010048	Tropical Forest Soil	VTFNPDRILDQILETLVEYDNWLTFRQLAHRITGDPSNDQLIAGIVHGHSGVFMVTDGYRCKLRTGFIEAVGIAPRPEELSKHLW*
Ga0126373_115427661	3300010048	Tropical Forest Soil	MFDPDRILDQILEIFVEYDNWLTFRQLACRVTGDPLDQHIIAEVVYRHSRVFVVTDGRCKLRTELSEDVAQIAPQP*
Ga0126370_112371931	3300010358	Tropical Forest Soil	MAADPELTLDQILEVFVDYNNWLTFRQLAQRLTGDPANEHLMAEVVRQHGQVFVVNDGCRCRLRTIEDAAPIAS*
Ga0126376_131727611	3300010359	Tropical Forest Soil	MPVTSNLDRTLDLILEIFVEYDNWLTFRQLATRLTGDPSNEQLIAGIVDRHSGVLVVTDGCRCKLRTGFIQDHPFSSKNATVLSRSFAANT
Ga0126372_111771002	3300010360	Tropical Forest Soil	MPIDSDLILDQILEVFVDYNNWLTFRQLAQRLTGDPSNESLIAQLVHQHGSVFIVSDGCRCRLRTVEDAAPIAS*
Ga0126378_120908482	3300010361	Tropical Forest Soil	MPDPDRILDQILEIFVEYDNWLTFRQLACRVTGDPLDQHIIAEVVYRHSRVFVVTDGRCKLRTELSEDVAQIAPQP*
Ga0126378_126118972	3300010361	Tropical Forest Soil	VTFNPDRILDQMLETFVEYNNWLTFRQLAYRLTGDPSNEKIIAEIVHRHSRIFMVTDGCRCKLRTDFIVDAVAPRL*
Ga0126378_131013671	3300010361	Tropical Forest Soil	MPIDSDLILDQILEVFVDYNNWLTFRQLAQRLTGDPSNESLIAQVVHQHGGVFMVRDGCRCRLRTVGDTAPTAPWP
Ga0126379_136257861	3300010366	Tropical Forest Soil	PGMAADPELILDQILEVFVDYNNWLTFRQLAQRLTGDPANEHVMAEVVRQHGQVFVVNDGCRCRLRTIEDAAPIAS*
Ga0126381_1001277893	3300010376	Tropical Forest Soil	VTFNPDRILDQMLETFVEYDDWLTFRQLAYRLTGDPSNEQIIAEIVHRHSRIFMVTDGYRCKLRSNSIEDAAAPRF*
Ga0126381_1003844222	3300010376	Tropical Forest Soil	MPVTSNLDRTLDVILEIFVEYDNWLTFRQLATRLTGDPSNEQLIAGIVDRHSGVLVVTDGCRCKLRTGFIEDSARIACRQQLSKHLS*
Ga0126381_1004184121	3300010376	Tropical Forest Soil	MRVTFDPDRILDAILETFIEYDNWLTFRQLANRLTGDPSNQQLIAGIVDQHGRVLVVTDGCRCKLRT*
Ga0126381_1011654272	3300010376	Tropical Forest Soil	VTFNPDRILDQMLETFVEYNNWLTFRQLAYRLTGDPSNEQIIAEIVHQHGRIFMVTDGCRCKLRSDSIEDAVAPSL*
Ga0126381_1022692351	3300010376	Tropical Forest Soil	MQKTFNPDRILDAILETFVECDNWLTFRQLANRLTGDPSNEQLIAGIVDRHGMVLTVTDGCRCKLRTEFIEDAAGVSARQPLYTRLV*
Ga0126381_1024000292	3300010376	Tropical Forest Soil	MLEPDRILDQLLEIFIEYDDWLTFRQLAYRATGDPSNQHVIAEIIHRHSRVFVVTDGRCKLRTDLIEDLAHLALQP*
Ga0126383_130364111	3300010398	Tropical Forest Soil	MPVTSNLDRTLDVILEIFVEYDNWLTFRQLATRLTGDPSNEQLIAGIVDRHSGVLVVTDGCRCKLRTGFIQ
Ga0150985_1166935042	3300012212	Avena Fatua Rhizosphere	MFDPDHILDQILEIFVEYDTWLTFRQLAYRVTGDPSNQHLIAEVVHQHSRVFIVNDGCRCKLRTELIEDAEQIKLHDKGLSTQLS*
Ga0126375_109521211	3300012948	Tropical Forest Soil	MPADPDLILDQILEVFVDYNNWLTFRQLAQRLTGDPSNEHLMAEVVRQHGQVFVVNDGCRCRLRTIEDAAPLAS*
Ga0126369_103859542	3300012971	Tropical Forest Soil	MPADPDLILDQILEVFVDYNNWITFRQLAQRLTGDPSNEHLMAEVVRQHGQVFIVNDGCRCRLRTIEDAAPIAS*
Ga0126369_125408481	3300012971	Tropical Forest Soil	MPVTSNLDRTLDLILEIFVEYDNWLTFRQLATRLTGDPSNEQLIAGIVDRHSGVLVVTDGCRCKLRTGFIQASR*
Ga0182024_105824742	3300014501	Permafrost	MFDPDRILDQILEIFVEYDNWLTFRNLAYRVTGDPSNQHVIAEVVHRHSRVFVVTDGCRCKLRTELIEDALQIAPLP*
Ga0132258_102059991	3300015371	Arabidopsis Rhizosphere	MLDADHILDQLLEVFIEYDNWLTFRQLAYRVTGDPSNQHEIAAVVYRHSRVFVVTDGRCKLRT
Ga0132256_1018594382	3300015372	Arabidopsis Rhizosphere	MFDPDRILDQILETFIEYDNWLTFRQLAYRVTGDPLNQHVIAEVVNRHSRVFVVNDGCRCKLRTELIEDAVQIARLT*
Ga0187818_102275211	3300017823	Freshwater Sediment	MFDTDRILDQILEIFIEYDNWLTFRQLAYRLTGEPSNEHVIAEVVHRHSRVLVVNDGCRCRLRTELIEDAAQIALLP
Ga0187824_103237431	3300017927	Freshwater Sediment	MPVDPDLILDQILEIFVDYNNWLTFRQLAERLTGDPSNESLIAKVVHQHEGVFIVSDGCRCKLRTVEDAAPIAS
Ga0187879_106785711	3300017946	Peatland	VMFDPDRMLDQILEIFVEYDNWLTFRQLAYRVTGDPSNQHVIAEVVHRHSQVFVVTDGCRCKLRTELIDDALQIAPLP
Ga0187779_107016951	3300017959	Tropical Peatland	MQVTFDPDRILDEILETFIEYDNWLTFRQLANRLTGDPSDEQLIARIVDRHSRVLVITDGCRCKLRTGFIEDAAGIGSRQRLSKHLL
Ga0187783_100119067	3300017970	Tropical Peatland	VTLNPDRILDQILETFVEYDDWLTFRQLAYRLTGSPSNEQLIAGIVHGHGRVFVVRDGCRCKLRTELIEAAAGIAPRLQELSKHL
Ga0187783_101143762	3300017970	Tropical Peatland	MRVTFNPDRILDAILEIFVEYDNWLTFRQLATRLTGDPSNEQLIAGIVDRHSGVLVVTDGCRCKLRTGFIEHPARIGCRQPLSKHLL
Ga0187780_107462621	3300017973	Tropical Peatland	VTFNPDRILDQMLETFVEFDNWLTFRQLASRLTGDPSNEQLIAGIVHRHSRVFIVTDGCRCKLRTDFIEDAVAPRL
Ga0187782_101472633	3300017975	Tropical Peatland	MRVTFNPDRILDAILEIFVEYDNWLTFRQLATRLTGDPSNEQLIAGIVDRHSGVLVVTDGCRC
Ga0187804_100309671	3300018006	Freshwater Sediment	MFDPDRILDQILETFVEYDNWLTFQQLACRVTGDPSNQHVIAEVVHRHSRVFVVNDGCRCKLRTELIEDAV
Ga0187805_106018952	3300018007	Freshwater Sediment	MFDPDRILDQMLEIFVEYDNWLTFRQLAYRVTGDPSNQHAIAEVIHRHSRVFVVNDGCRCKLRTDFIEDTVAPRL
Ga0187883_101407261	3300018037	Peatland	MLDQILEIFVEYDNWLTFRQLAYRVTGDPSNQHVIAEVVHRHSQVFVVTDGCRCKLRTELIDDALQIAPLP
Ga0187784_101062002	3300018062	Tropical Peatland	MQVPFNPDRILDVILETFIEYDNWLTFRQLANRLTGDPSDEQLIAGIVDRHSRVLVITDGCMCKLRTGFIEDAAGIGSRQRLSKHLLVAVGATIA
Ga0187784_102908032	3300018062	Tropical Peatland	MQATFNPDRILDAILETFVEYDNWLTLRQLANRPTGDPSNEQLIAGIVDRHSRVLVITDGCRCKLRTGFIEDAAAIASRQQLSKHPL
Ga0187772_100118053	3300018085	Tropical Peatland	VPFNPDRILDQMLETFVEYNSWLTFRQLADRLTGDPSNEHLVAGIVHRHSRVFMVTDGCRCKLRTESIEDAFAPRL
Ga0210403_100208166	3300020580	Soil	MFDTDRILDQILEVFIEYDNWLTFRQLACRLTGEPSNEHVIAEVVHRHSRVLVVNDGCRCRLRTELIEDAAQIARLP
Ga0210399_101029375	3300020581	Soil	MFDPDRILDQILEIFVEYDNWLTFRQLANRVTGDPSNHHVIAEVVHRHSRVFAVSDGCRCKLRTELIEDAFQIAPLP
Ga0210399_106482372	3300020581	Soil	MFDTDRILDQILEVFIEYDNWLTFRQLACRLTGEPSNEHVIAEVVHRHSRVLVVNDGCRCRL
Ga0182009_100056031	3300021445	Soil	VMFHPDRLLDQMLEIFVEYDNWLTFRQLAYRVTGDLSDEHVIAEIVYRHNRVFVVNDGSRCRLRTELIEDAVQIEPHGNSLPNQW
Ga0126371_103087102	3300021560	Tropical Forest Soil	MRFNPDRILDQMLETFVEDNNWLTFRQFAYRLTGDASNQQLIAGIVPRHTRVFMATDGCKGKLRADFIQDVVAPRF
Ga0126371_105471302	3300021560	Tropical Forest Soil	VTFNPDRILDQMLETFVEYNNWLTFRQLAYRLTGDPSNEKIIAEIVHRHSRIFMVTDGCRCKLRTDFIVDAVAPRL
Ga0126371_107633702	3300021560	Tropical Forest Soil	MPIDSDLILDQILEVFVDYNNWLTFRQLAQRLTGDPSNESLIAQVVHQHGGVFMVRDGCRCRLRTVGDTAPTAPWPGRD
Ga0126371_135335161	3300021560	Tropical Forest Soil	MPDPDRILDQILEIFVEYDNWLTFRQLACRVTGDPLDQHIIAEVVYRHSRVFVVTDGRCKLRTELSEDVAQIAPQP
Ga0207694_112745151	3300025924	Corn Rhizosphere	VHVMFDPDRILDQILETFIEYDNWLTFRQLAYRVTGDPSNQHVIAEVVYRHSRVFDMNDGCRCKLRTELIEDAVQIARLT
Ga0207700_101032602	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MLDPDHILDQLLEVFIDYDNWLTFRQLAYRATGDPSNQDVIAAVVYRHSRVFVVTDGRCKLRTELIEDVAQIAPQP
Ga0207665_103695561	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VMLDPDHILDQLLEVFIDYDNWLTFRQLAYRATGDPSNQDVIAAVVYRHSRVFVVTD
Ga0209060_100003352	3300027826	Surface Soil	MFDPDRILDQMLETFVEHNNWLTFRQLAYRLTGDPSNHQLIAGIVHRQGRVLMVTDGCRCKLRTDFIEDTVAPRL
Ga0209067_108454881	3300027898	Watersheds	MFDTDRILDQILEIFIEYDNWLTFRQLACRLTGEPSNEHVIAEVVHRHSRVLVVNDGCRCRLRTELI
Ga0209698_1000605312	3300027911	Watersheds	MFDPDRILDQILEIFVEYDNWLTFRQLAYRITGDPSNEHVIAEVVHRHSRVLVVNDGCRCRLRVEFVKDTSQTAPLP
Ga0209698_100210962	3300027911	Watersheds	MPVDPDPILDQILEIFVDYNNWLTFRQLAQRLTGDPSNEHMIAEVVREHDSVFIVEDSCRCKLRTIEDAAPIAS
Ga0209698_100487055	3300027911	Watersheds	MFDTDRILDQILEIFIEYDNWLTFRQLACRLTGEPSNEHVIAEVVHRHSRVLVVNDGCRCRLRTELIEDAAQIALLP
Ga0209698_109659781	3300027911	Watersheds	MFDPDRILDQILETFIEHDNWLTFRQLAYRVTGDPSNQHVIAEVVYRHNRVFVVNDGCRCKLRTELIEDAVQIAPLP
Ga0209168_1000084212	3300027986	Surface Soil	MQLTLNPDRILDLILETFVEYDNWLTFRQLANRLTGDPSNDQLIAQIVHRHSSVLVITDGCRCRLRAGFIEDAAIAPRQQTSNRLL
Ga0170824_1032890141	3300031231	Forest Soil	MFDPDRILDQILETFVEYDNWLTFRQLAYRVTGDSSNQHIIAEVVHRHSRVFVVNDGCRCKLRTELIEDAVQIAPL
Ga0307475_104550403	3300031754	Hardwood Forest Soil	MFDTDRILDQILEVFIEYDNWLTFRQLACRLTGEPSNEHVIAEVVHRHSRVLVLNDGCRCRLRTELIGDAAQIEPHGGNRRELGQLWSVTH
Ga0306926_109485041	3300031954	Soil	MLEPDRILDQLLEIFVEYDNWLTFRQLACRATGESSNQHVIAGIIYRHSRVFVVTDGRCKLRTELIEDVAHAAPQP
Ga0308176_103032553	3300031996	Soil	MFDPDRILDQILESFIEYDNWLTFRQLAYRVTGDPSNQHVIAEVVYRHSRVFDMNDGCRCKLRTELIEDAVQIARLT
Ga0307470_101954802	3300032174	Hardwood Forest Soil	MFDPDRILDQILETFVEYDNWLTFRQLAYRITAEPSNEHVIAEVVHRHSRVLVVNDGCRCRLRTELIEDAAQIAPLP
Ga0306920_1030670541	3300032261	Soil	MQVAFSPDRILDAILETFIEYDNWLTFRQLANRLTGDLSNEQLIAGIVDRHGGVLVVADGCRCKLRTGFIEYEGRTRRD
Ga0335085_1000024158	3300032770	Soil	MQATFNPDRILDAILETFVEYDNWLTFRQLANRLTGDASNQHVIAEVVYRHSRVFVVTDGRCKLRTELIEDVAHIASQP
Ga0335085_101690792	3300032770	Soil	MQVKLNPDRILDLILETFVEYDNWLTFRQLANRLTGDPANDQLIAGIVYRHSRVLVVTDGCRCKLRTAFIEDAPIACRQQSSTHLV
Ga0335085_120726172	3300032770	Soil	MFNPDLILDQILEIFVEYDNWLTFRQLAYRLTGNPTNEHVVAEVIHRHNRVFVVTDGCRCKLRTEFIEDVAKIAAPP
Ga0335079_101971991	3300032783	Soil	MPVDPHLILDQILEVFVDYNNWLTFRQLADRLTGDPANEHLIAGVVRQHGSVFIVEDGCRCRLRTVEDAEPIAS
Ga0335079_102379312	3300032783	Soil	MPVNPNLILDQILEVFVDYNNWLTFRQLAQRLTGDPSNEHLIAEVVRQHGSVFIVNEGCRCKLRTLDDAAPIAS
Ga0335079_122867481	3300032783	Soil	MRATFDPDRILDLILETFVDYDNWLTFRQLANRLTEDPSNDQLIAGIVHRHNGVFEVTGGCRCKLRTGFIEDAAIAPGQQSSKHLA
Ga0335080_103299641	3300032828	Soil	MPVPLSPDRILDQMLETFVEYNNWLTFEQLAGRLTGDPSNQRLIAGIVHRHSRVFMVTDGCRCKLRTESIEDAFAPRL
Ga0335083_100875471	3300032954	Soil	MSNLKKGCMQVKLNPDRILDLILETFVEYDNWLTFRQLANRLTGDPANDQLIAGIVYRHSRVLVVTDGCRCKLRTAFIEDAPIACRQQSSTHLV
Ga0335084_100727362	3300033004	Soil	MPVDPDLILDQILEVFVDYNNWLTFRQLAQRLTGDPSNESLIAEVVRQHDGVFIVSDGSRCKLRTIEDAAQIAS
Ga0335084_103062182	3300033004	Soil	MRATLDADRILDGMLETFVEYNNWLTFRQLACRLTGDASNEEFIAGIVRRHTRVFVVTDGCRCRLRSDVC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095989

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences