Metagenome / Metatranscriptome Family F095972

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095972
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	72 residues
Representative Sequence	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV
Number of Associated Samples	71
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.19 %
% of genes near scaffold ends (potentially truncated)	26.67 %
% of genes from short scaffolds (< 2000 bps)	77.14 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.476 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (31.429 % of family members)
Environment Ontology (ENVO)	Unclassified (49.524 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.66% β-sheet: 10.96% Coil/Unstructured: 64.38%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF12543	DUF3738	8.57
PF02371	Transposase_20	2.86
PF14534	DUF4440	2.86
PF16640	Big_3_5	1.90
PF03965	Penicillinase_R	1.90
PF12704	MacB_PCD	0.95
PF00069	Pkinase	0.95
PF01344	Kelch_1	0.95
PF13520	AA_permease_2	0.95
PF13000	Acatn	0.95
PF01757	Acyl_transf_3	0.95
PF02824	TGS	0.95
PF01212	Beta_elim_lyase	0.95
PF00589	Phage_integrase	0.95
PF02368	Big_2	0.95
PF13620	CarboxypepD_reg	0.95
PF13545	HTH_Crp_2	0.95
PF13646	HEAT_2	0.95
PF00903	Glyoxalase	0.95
PF00440	TetR_N	0.95
PF14514	TetR_C_9	0.95
PF02837	Glyco_hydro_2_N	0.95
PF14417	MEDS	0.95
PF13432	TPR_16	0.95
PF05402	PqqD	0.95
PF00072	Response_reg	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.81
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.86
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	1.90
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	1.90
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.90
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	0.95
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.95
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.95
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	0.95
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.95
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.95
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.95
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.95
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.95
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.95
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.95
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.95
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.95
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.95
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.95
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.95
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
All Organisms	root	All Organisms	49.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
cellular organisms	root	All Organisms → cellular organisms	49.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.95 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.38 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.95 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	7.62 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.95 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.95 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.95 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	7.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.95 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	7.62 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.95 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.95 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.95 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	7.62 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	0.95 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.95 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.95 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.95 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	7.62 %
Micromonospora lupini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini	0.95 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	0.95 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.95 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.95 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	7.62 %
Micromonospora lupini str. Lupac 08	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini → Micromonospora lupini str. Lupac 08	0.95 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	0.95 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.95 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.95 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1207008	Not Available	576	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1001449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4853	Open in IMG/M
3300004633\|Ga0066395_10264370	Not Available	927	Open in IMG/M
3300005332\|Ga0066388_100495701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1858	Open in IMG/M
3300005332\|Ga0066388_100834842	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300005332\|Ga0066388_101794295	Not Available	1090	Open in IMG/M
3300005332\|Ga0066388_105799503	Not Available	624	Open in IMG/M
3300005332\|Ga0066388_107421752	Not Available	550	Open in IMG/M
3300005529\|Ga0070741_10015965	All Organisms → cellular organisms → Bacteria	12620	Open in IMG/M
3300005764\|Ga0066903_100156134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3293	Open in IMG/M
3300005764\|Ga0066903_100599459	Not Available	1908	Open in IMG/M
3300005764\|Ga0066903_100950267	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300005764\|Ga0066903_101766046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1180	Open in IMG/M
3300006052\|Ga0075029_100256857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300006059\|Ga0075017_100965186	Not Available	663	Open in IMG/M
3300006086\|Ga0075019_10350029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300006162\|Ga0075030_101267070	Not Available	578	Open in IMG/M
3300006173\|Ga0070716_100029069	All Organisms → cellular organisms → Bacteria	2984	Open in IMG/M
3300006174\|Ga0075014_100706900	Not Available	587	Open in IMG/M
3300006176\|Ga0070765_102280206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	504	Open in IMG/M
3300006237\|Ga0097621_102233296	Not Available	523	Open in IMG/M
3300006358\|Ga0068871_102358670	Not Available	507	Open in IMG/M
3300009792\|Ga0126374_10539494	Not Available	849	Open in IMG/M
3300009792\|Ga0126374_10941559	Not Available	673	Open in IMG/M
3300010043\|Ga0126380_10041244	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300010043\|Ga0126380_10146377	Not Available	1505	Open in IMG/M
3300010043\|Ga0126380_10662030	Not Available	833	Open in IMG/M
3300010043\|Ga0126380_11391726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	616	Open in IMG/M
3300010043\|Ga0126380_12126378	Not Available	517	Open in IMG/M
3300010047\|Ga0126382_10040419	All Organisms → cellular organisms → Bacteria	2647	Open in IMG/M
3300010048\|Ga0126373_10377151	Not Available	1437	Open in IMG/M
3300010048\|Ga0126373_10400346	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300010358\|Ga0126370_10058781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	2485	Open in IMG/M
3300010358\|Ga0126370_10188728	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300010358\|Ga0126370_10742597	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300010358\|Ga0126370_10784324	Not Available	848	Open in IMG/M
3300010359\|Ga0126376_10211261	Not Available	1617	Open in IMG/M
3300010359\|Ga0126376_11437194	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	716	Open in IMG/M
3300010360\|Ga0126372_10289143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1433	Open in IMG/M
3300010360\|Ga0126372_12876758	Not Available	533	Open in IMG/M
3300010361\|Ga0126378_10639850	Not Available	1177	Open in IMG/M
3300010361\|Ga0126378_11227232	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	847	Open in IMG/M
3300010366\|Ga0126379_10618991	Not Available	1170	Open in IMG/M
3300010376\|Ga0126381_100236032	All Organisms → cellular organisms → Bacteria	2468	Open in IMG/M
3300010376\|Ga0126381_101331757	Not Available	1038	Open in IMG/M
3300010376\|Ga0126381_102192763	Not Available	795	Open in IMG/M
3300010376\|Ga0126381_103169199	Not Available	651	Open in IMG/M
3300010398\|Ga0126383_11052069	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300010398\|Ga0126383_11673804	Not Available	725	Open in IMG/M
3300010398\|Ga0126383_12559319	Not Available	594	Open in IMG/M
3300012948\|Ga0126375_10896070	Not Available	712	Open in IMG/M
3300016270\|Ga0182036_10065230	All Organisms → cellular organisms → Bacteria	2351	Open in IMG/M
3300016294\|Ga0182041_11665391	Not Available	590	Open in IMG/M
3300016319\|Ga0182033_10347532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	1239	Open in IMG/M
3300016371\|Ga0182034_10173494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1644	Open in IMG/M
3300016371\|Ga0182034_10689474	Not Available	868	Open in IMG/M
3300016387\|Ga0182040_10598473	Not Available	892	Open in IMG/M
3300016404\|Ga0182037_11691048	Not Available	564	Open in IMG/M
3300017822\|Ga0187802_10089608	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300017823\|Ga0187818_10004935	All Organisms → cellular organisms → Bacteria → Acidobacteria	5685	Open in IMG/M
3300017936\|Ga0187821_10143689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300017970\|Ga0187783_10870628	Not Available	649	Open in IMG/M
3300017970\|Ga0187783_11003498	Not Available	601	Open in IMG/M
3300017972\|Ga0187781_10040108	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	3226	Open in IMG/M
3300017973\|Ga0187780_11270446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	540	Open in IMG/M
3300017975\|Ga0187782_10038882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3463	Open in IMG/M
3300018006\|Ga0187804_10019179	All Organisms → cellular organisms → Bacteria	2468	Open in IMG/M
3300018012\|Ga0187810_10223243	Not Available	769	Open in IMG/M
3300018034\|Ga0187863_10009217	All Organisms → cellular organisms → Bacteria	6530	Open in IMG/M
3300019241\|Ga0187793_1038293	Not Available	564	Open in IMG/M
3300020580\|Ga0210403_10272686	Not Available	1387	Open in IMG/M
3300021171\|Ga0210405_10218933	Not Available	1508	Open in IMG/M
3300021406\|Ga0210386_11219167	Not Available	636	Open in IMG/M
3300021560\|Ga0126371_10023324	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	5728	Open in IMG/M
3300021560\|Ga0126371_10118026	Not Available	2672	Open in IMG/M
3300021560\|Ga0126371_13189640	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300021560\|Ga0126371_13534007	Not Available	527	Open in IMG/M
3300021861\|Ga0213853_10890883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300022724\|Ga0242665_10236390	Not Available	616	Open in IMG/M
3300025915\|Ga0207693_10785962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	734	Open in IMG/M
3300027874\|Ga0209465_10325298	Not Available	770	Open in IMG/M
3300027898\|Ga0209067_10531890	Not Available	670	Open in IMG/M
3300031590\|Ga0307483_1037252	Not Available	528	Open in IMG/M
3300031740\|Ga0307468_102118040	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	542	Open in IMG/M
3300031879\|Ga0306919_10427227	Not Available	1018	Open in IMG/M
3300031910\|Ga0306923_10590278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1248	Open in IMG/M
3300031912\|Ga0306921_11558857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300031962\|Ga0307479_10001165	All Organisms → cellular organisms → Bacteria	23882	Open in IMG/M
3300031962\|Ga0307479_11976270	Not Available	532	Open in IMG/M
3300032001\|Ga0306922_10311899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini → Micromonospora lupini str. Lupac 08	1689	Open in IMG/M
3300032076\|Ga0306924_12156060	Not Available	570	Open in IMG/M
3300032180\|Ga0307471_102821148	Not Available	617	Open in IMG/M
3300032805\|Ga0335078_10000001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1101837	Open in IMG/M
3300032828\|Ga0335080_10041522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5061	Open in IMG/M
3300032828\|Ga0335080_10556090	Not Available	1212	Open in IMG/M
3300032829\|Ga0335070_10074137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3645	Open in IMG/M
3300032829\|Ga0335070_10346329	Not Available	1431	Open in IMG/M
3300032892\|Ga0335081_12289931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	565	Open in IMG/M
3300032893\|Ga0335069_10042907	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6014	Open in IMG/M
3300032893\|Ga0335069_10198549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2446	Open in IMG/M
3300032893\|Ga0335069_11008868	Not Available	923	Open in IMG/M
3300032895\|Ga0335074_10263002	All Organisms → cellular organisms → Bacteria → Acidobacteria	2015	Open in IMG/M
3300032898\|Ga0335072_10172997	All Organisms → cellular organisms → Bacteria → Acidobacteria	2607	Open in IMG/M
3300032954\|Ga0335083_10648616	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300033289\|Ga0310914_11291696	Not Available	632	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.10%
Host-Associated	Host-Associated	1.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.71%
Aquatic	Environmental → Aquatic	12.38%
Plants	Host-Associated → Plants	1.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.71%
Freshwater	Environmental → Aquatic → Freshwater	6.67%
Sediment	Environmental → Aquatic → Sediment	5.71%
Roots	Host-Associated → Plants → Roots	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.14%
Loam	Environmental → Terrestrial → Soil → Loam	13.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.95%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	31.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.43%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.90%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.95%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.95%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300019241	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_12070081	2228664022	Soil	MKFKQLRHIVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV
AP72_2010_repI_A01DRAFT_10014494	3300000579	Forest Soil	MKFRQLRHIVDELHRGYPEIDDAEVKINIGPTVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0066395_102643702	3300004633	Tropical Forest Soil	MLKGESEMKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0066388_1004957014	3300005332	Tropical Forest Soil	MKFKQLRHMVDELHRSYPEIDDAEVKINIGHSVVDFDEISHFMKEGMVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0066388_1008348421	3300005332	Tropical Forest Soil	MKFKQLRHMVDELHRGYPEIDDAEVRINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSL
Ga0066388_1017942951	3300005332	Tropical Forest Soil	MVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSL
Ga0066388_1057995031	3300005332	Tropical Forest Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINVGHSVVDFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0066388_1074217521	3300005332	Tropical Forest Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSL
Ga0070741_100159652	3300005529	Surface Soil	MKFKELRRMVDELHKGYPEIDDAEVKINIGHSVVDFDEISHFIKEDIVILFPIRERPTGPWRSSLGQTSSRRV*
Ga0066903_1001561345	3300005764	Tropical Forest Soil	MKFKQLRHIVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0066903_1005994591	3300005764	Tropical Forest Soil	MKFEQLRHIVDELHKGHPEIDDAEVRINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSL
Ga0066903_1009502673	3300005764	Tropical Forest Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINVGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0066903_1017660461	3300005764	Tropical Forest Soil	MKFKQLRHMVDELHRGYPGIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGP
Ga0075029_1002568572	3300006052	Watersheds	MKFKQLRHMVDEMHRGYPEIDDAEVKINFGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0075017_1009651862	3300006059	Watersheds	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDVVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0075019_103500291	3300006086	Watersheds	MKFKQLRHMVDEMHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPNGPWRSSLGQASSRRV*
Ga0075030_1012670701	3300006162	Watersheds	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPNGPWRSSLGQASSRRV*
Ga0070716_1000290691	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKFRQLRDIVDELHRGYPEIDDAEVKINIGRSVVGFDEISHFIKEDIVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0075014_1007069001	3300006174	Watersheds	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0070765_1022802062	3300006176	Soil	MKFEQLRHIVDELHRGHPEIDDAEVRINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSFGQASSRRV
Ga0097621_1022332961	3300006237	Miscanthus Rhizosphere	MKFRQLRDIVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0068871_1023586701	3300006358	Miscanthus Rhizosphere	RGYPEIDDAEVKINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0126374_105394941	3300009792	Tropical Forest Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFAEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0126374_109415591	3300009792	Tropical Forest Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVGFDEISHYIKEDTVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0126380_100412441	3300010043	Tropical Forest Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINVGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSGGSVRGSASGTDDC*
Ga0126380_101463771	3300010043	Tropical Forest Soil	QLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGRSSSRRV*
Ga0126380_106620301	3300010043	Tropical Forest Soil	MVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDVVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0126380_113917262	3300010043	Tropical Forest Soil	DELHRSYREIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGRASSRRV*
Ga0126380_121263781	3300010043	Tropical Forest Soil	MKFKQLRHIVDELHRGYPEIDDAEVKINIGHSVVDFDEISHYIKEDTVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0126382_100404192	3300010047	Tropical Forest Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSDRV*
Ga0126373_103771511	3300010048	Tropical Forest Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0126373_104003462	3300010048	Tropical Forest Soil	MKFEQLRHIVDELHRGHPEIDDAEVRINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQAFSRRV*
Ga0126370_100587811	3300010358	Tropical Forest Soil	MKFEQLRHIVDELHRGHPEIDDAEVRINIGHCVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQAFSRRV*
Ga0126370_101887283	3300010358	Tropical Forest Soil	MLMLKGESEMKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSL
Ga0126370_107425971	3300010358	Tropical Forest Soil	MVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLG
Ga0126370_107843241	3300010358	Tropical Forest Soil	KQLRHIVDELYRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLRQASSRRV*
Ga0126376_102112613	3300010359	Tropical Forest Soil	MVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGRSSSRRV*
Ga0126376_114371942	3300010359	Tropical Forest Soil	MKFEQLRHIVDELHRGHPEIDDAEVRINIGHCVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSL
Ga0126372_102891432	3300010360	Tropical Forest Soil	MKFEQLRHIVDELHRGHPEIDDAEVRINIGHCVVGFNEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0126372_128767581	3300010360	Tropical Forest Soil	KQLRHLVDELHRGYPEIDDAEVKINIGHAVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0126378_106398503	3300010361	Tropical Forest Soil	MLMLKGESEMKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFMKEDMVVLFPIRERPTGPWRSSLGQASSRR
Ga0126378_112272323	3300010361	Tropical Forest Soil	MVDELHRGYPEIDDAEVKINTGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRGEQP
Ga0126379_106189912	3300010366	Tropical Forest Soil	MLMLKGESEMKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWR
Ga0126381_1002360323	3300010376	Tropical Forest Soil	MLMLKGESEMKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGRASSRRV*
Ga0126381_1013317571	3300010376	Tropical Forest Soil	MKFEQLRHIVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQAPSRRV*
Ga0126381_1021927631	3300010376	Tropical Forest Soil	DELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIKERPTGPWRSSLGQASSRRV*
Ga0126381_1031691992	3300010376	Tropical Forest Soil	MKFEQLRHIVDELHRGHPEIDELEVRINIGHSVVGFDEISHFIKEDVVVLFPIRERPTGPWRSSLGQTSSRRV*
Ga0126383_110520691	3300010398	Tropical Forest Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGRASSRRV*
Ga0126383_116738042	3300010398	Tropical Forest Soil	EVQTMRHMVDELHRGYPEIDDAEVKINVSHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0126383_125593192	3300010398	Tropical Forest Soil	MLMLKENEKMKFKQLRDIVDELHRGYPEIDDAEVKLNIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV*
Ga0126375_108960701	3300012948	Tropical Forest Soil	KQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRVHPSSPQDP*
Ga0182036_100652301	3300016270	Soil	MKFEQLRHIVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV
Ga0182041_116653911	3300016294	Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV
Ga0182033_103475321	3300016319	Soil	LHRGHPEIDDAEVRINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQAFSRR
Ga0182034_101734941	3300016371	Soil	KMKFKQLRHIVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV
Ga0182034_106894741	3300016371	Soil	MKFKQLRHMVDELHRDYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV
Ga0182040_105984731	3300016387	Soil	MKFKQLRQMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV
Ga0182037_116910482	3300016404	Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGPASSRRV
Ga0187802_100896082	3300017822	Freshwater Sediment	MKFKQLRHIVDELYRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV
Ga0187818_100049354	3300017823	Freshwater Sediment	MKFKQLRHIVDELHRGHPEIDDAEVRINIGPSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQAFQASP
Ga0187821_101436891	3300017936	Freshwater Sediment	MKFKQLRHIVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV
Ga0187783_108706281	3300017970	Tropical Peatland	MKFAQLRHIVDELHRGHPEIDDAEVRINIGHSVVGFDEISHFIKEDMVVHFPIRERPTGPWRSSLGQTFSRRV
Ga0187783_110034981	3300017970	Tropical Peatland	MKFAQLRHIVDELHRGHPEIDDAEVRINIGHSVVGFDEISHFITEDMVVLFPIRERPTGPWRSSLGQAFSRRV
Ga0187781_100401082	3300017972	Tropical Peatland	MKFAQLRHIVDELHRGHPEIDDAEVRINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQTFSRRV
Ga0187780_112704462	3300017973	Tropical Peatland	MVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV
Ga0187782_100388823	3300017975	Tropical Peatland	MKFEQLRHIVDELHRGHPEIDDAEVRINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQTFSRRV
Ga0187804_100191792	3300018006	Freshwater Sediment	MKFKQLRHIVDEMHRGHPEVDDAEVRINIGPSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQAFQASP
Ga0187810_102232431	3300018012	Freshwater Sediment	MKFKQLRHIVDELYRGYPEIDDAEVKINIGHSVVGFDEISHFIKGDTVVLFPIRERPTGPWRSSLGQASSRRV
Ga0187863_100092172	3300018034	Peatland	MKFKQLRHIVDELHRGYPEIDDAEVRINIGRSVVGFDEISHVIKEDIVVLFPIRERPTGPWRSSLGQASSRRV
Ga0187793_10382931	3300019241	Peatland	MKFKQLREMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQVSSRRV
Ga0210403_102726862	3300020580	Soil	MKFEQLRHIVDELHRGHPEIDDAEVRINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV
Ga0210405_102189333	3300021171	Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV
Ga0210386_112191672	3300021406	Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINVGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV
Ga0126371_100233247	3300021560	Tropical Forest Soil	MKFEQLRHIVDELHRGHPEIDDAEVRINIGHCVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQAFSRRV
Ga0126371_101180261	3300021560	Tropical Forest Soil	MKFKQLRQMVDELHRGYPEIDDAEVKINTGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSR
Ga0126371_131896402	3300021560	Tropical Forest Soil	MKFKQLRHFVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV
Ga0126371_135340072	3300021560	Tropical Forest Soil	PGRPNVIGRYVDVEGGMNMKFKQLRDMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDTVVLFPIRERPTGPRRSSLGQAPPRRV
Ga0213853_108908832	3300021861	Watersheds	MKFKQLRHMVDEMHRGYPEIDDAEVKINFGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV
Ga0242665_102363901	3300022724	Soil	MVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV
Ga0207693_107859622	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKFRQLRDIVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQA
Ga0209465_103252981	3300027874	Tropical Forest Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQAFSRRV
Ga0209067_105318901	3300027898	Watersheds	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPNGPWRSSLGQASSRRV
Ga0307483_10372521	3300031590	Hardwood Forest Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV
Ga0307468_1021180401	3300031740	Hardwood Forest Soil	MKFEQLRHIVDELHRGHPEIDDAEVKINIGHSVVGFDEISHFIKEDVVVLFPIRERPSGPWRSSLGQAFQASP
Ga0306919_104272271	3300031879	Soil	MKFEQLRHIVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGQASSRRV
Ga0306923_105902781	3300031910	Soil	MKFKQLRHIVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSLGPASSRRV
Ga0306921_115588571	3300031912	Soil	MKFKQLRHLVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV
Ga0307479_100011655	3300031962	Hardwood Forest Soil	MVDELHRGYPEIDDAEVKINVGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV
Ga0307479_119762701	3300031962	Hardwood Forest Soil	MKFKQLRHIVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFMKEDTVVLFPIRERPTGPWRSSLGQASSRRV
Ga0306922_103118991	3300032001	Soil	MKFKQLRHIVDELHRGHPEIDDAEVKINIGHSVVGFDEISHFINEEMVVLFPIRERPTGPWRSSLGQAPSPHV
Ga0306924_121560601	3300032076	Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGP
Ga0307471_1028211481	3300032180	Hardwood Forest Soil	MKFKQLRHIVDELHRGHPEIDDAEVKINIGHSVVGFDEISHFIKEDVVVLFPIRERPSGPWRSSLGQAFQASP
Ga0335078_10000001211	3300032805	Soil	MKFKQLRQIVDEMHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWRSSFGQAYSRRV
Ga0335080_100415221	3300032828	Soil	MKFKQLRHIVDELHRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWGSSLGQASSRRV
Ga0335080_105560901	3300032828	Soil	MKFKQLRHIVDELHTGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIRERPTGPWGSSLGQASSRRV
Ga0335070_100741373	3300032829	Soil	MKFKQLREIVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDTVVLFPIRERPTGPWGSSLGQASSRRV
Ga0335070_103463292	3300032829	Soil	MKFKQLRHLVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIREDVVVLFPIRERPTGPWRSSLGQSTSRRM
Ga0335081_122899311	3300032892	Soil	MKFEQLRHIVDELHRGHPEIDDAEVRINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWTSSLGQASSRRV
Ga0335069_100429072	3300032893	Soil	MKFKQLRHLVDELHRSYPEIDDAEVKINIGHSVVGFDEISHFIKEDVVVLFPIRERPTGPWRSSLGQSSSRRM
Ga0335069_101985492	3300032893	Soil	MKFKQLRHLVDELHRGYPEIDDAEVKINIGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQSSSRRM
Ga0335069_110088682	3300032893	Soil	MKFKQLQEIVDELHRGYPEIDDAEVKINIGHSVVGFDEISHLIKEDTVVLFPIRERPTGPWGSSLGQASSRRV
Ga0335074_102630022	3300032895	Soil	MKFKQLRQIVDELDRGYPEIDDAEVKINIGHSVVGFDEISHFIKEDTVVLFPIKERPTGPWISSLGQASSRRV
Ga0335072_101729973	3300032898	Soil	MKFEQLRHIVDELHRDHPEIDDAEVRINIGHSVVGFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQAFSRRV
Ga0335083_106486162	3300032954	Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINVGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWKSSLGQTSSRRV
Ga0310914_112916962	3300033289	Soil	MKFKQLRHMVDELHRGYPEIDDAEVKINTGHSVVDFDEISHFIKEDMVVLFPIRERPTGPWRSSLGQASSRRV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095972

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences