Metagenome Family F095969

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095969
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	63 residues
Representative Sequence	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRAGTP
Number of Associated Samples	93
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.87 %
% of genes near scaffold ends (potentially truncated)	44.76 %
% of genes from short scaffolds (< 2000 bps)	87.62 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.714 % of family members)
Environment Ontology (ENVO)	Unclassified (41.905 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.524 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 82.54% β-sheet: 0.00% Coil/Unstructured: 17.46%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF06912	DUF1275	34.29
PF13975	gag-asp_proteas	4.76
PF13628	DUF4142	4.76
PF13650	Asp_protease_2	2.86
PF00072	Response_reg	0.95
PF00698	Acyl_transf_1	0.95
PF01336	tRNA_anti-codon	0.95
PF00390	malic	0.95
PF03288	Pox_D5	0.95
PF06032	DUF917	0.95
PF00275	EPSP_synthase	0.95
PF13419	HAD_2	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	34.29
COG0281	Malic enzyme	Energy production and conversion [C]	0.95
COG3378	DNA primase, phage- or plasmid-associated	Mobilome: prophages, transposons [X]	0.95
COG3535	Uncharacterized conserved protein, DUF917 family	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.14 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.14 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.14 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	92.38 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	92.38 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	83.81 %
Unclassified	root	N/A	2.86 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	83.81 %
Unclassified	root	N/A	2.86 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	83.81 %
Unclassified	root	N/A	2.86 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459020\|G1P06HT01EMLZ2	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300002245\|JGIcombinedJ26739_101123203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300004114\|Ga0062593_100673520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1003	Open in IMG/M
3300004479\|Ga0062595_100415888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	971	Open in IMG/M
3300004643\|Ga0062591_102015500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300005167\|Ga0066672_10176990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1350	Open in IMG/M
3300005167\|Ga0066672_10665010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300005171\|Ga0066677_10549878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300005175\|Ga0066673_10433016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300005179\|Ga0066684_10958088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300005180\|Ga0066685_11116319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300005181\|Ga0066678_10432118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875	Open in IMG/M
3300005184\|Ga0066671_10911621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300005187\|Ga0066675_10130486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1702	Open in IMG/M
3300005332\|Ga0066388_101621035	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300005434\|Ga0070709_11018018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300005434\|Ga0070709_11606539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300005435\|Ga0070714_100557630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1097	Open in IMG/M
3300005436\|Ga0070713_101302493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300005439\|Ga0070711_100125120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1907	Open in IMG/M
3300005439\|Ga0070711_100514571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	988	Open in IMG/M
3300005440\|Ga0070705_100672096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300005444\|Ga0070694_100632816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300005454\|Ga0066687_10437260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	763	Open in IMG/M
3300005554\|Ga0066661_10378764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300005555\|Ga0066692_10182513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1305	Open in IMG/M
3300005560\|Ga0066670_10923776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300005564\|Ga0070664_101483392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300005569\|Ga0066705_10526993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	736	Open in IMG/M
3300005576\|Ga0066708_10143415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1461	Open in IMG/M
3300005587\|Ga0066654_10112614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1333	Open in IMG/M
3300005764\|Ga0066903_100532065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2006	Open in IMG/M
3300006032\|Ga0066696_10482784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	813	Open in IMG/M
3300006034\|Ga0066656_10401184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	887	Open in IMG/M
3300006046\|Ga0066652_101128508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300006173\|Ga0070716_100070568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2052	Open in IMG/M
3300006175\|Ga0070712_100752640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300006175\|Ga0070712_101263823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300006237\|Ga0097621_101333743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300006755\|Ga0079222_10226378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1152	Open in IMG/M
3300006800\|Ga0066660_10278562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1324	Open in IMG/M
3300006804\|Ga0079221_10742642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	692	Open in IMG/M
3300006914\|Ga0075436_101049354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300009012\|Ga0066710_101751576	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300009012\|Ga0066710_102980825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300009012\|Ga0066710_103712407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300009137\|Ga0066709_100012231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	7981	Open in IMG/M
3300009137\|Ga0066709_101233302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1100	Open in IMG/M
3300009143\|Ga0099792_10000918	All Organisms → cellular organisms → Bacteria	10787	Open in IMG/M
3300010046\|Ga0126384_12209030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300010159\|Ga0099796_10099207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1093	Open in IMG/M
3300010303\|Ga0134082_10156721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	922	Open in IMG/M
3300010320\|Ga0134109_10072149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1172	Open in IMG/M
3300010322\|Ga0134084_10098332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	931	Open in IMG/M
3300010337\|Ga0134062_10004189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5105	Open in IMG/M
3300012199\|Ga0137383_10089050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2235	Open in IMG/M
3300012202\|Ga0137363_10148702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1838	Open in IMG/M
3300012212\|Ga0150985_100451206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300012917\|Ga0137395_10154362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1573	Open in IMG/M
3300012922\|Ga0137394_10592439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	938	Open in IMG/M
3300012951\|Ga0164300_10900372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300012971\|Ga0126369_10593510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1177	Open in IMG/M
3300012984\|Ga0164309_11090202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300012986\|Ga0164304_10078747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1899	Open in IMG/M
3300012989\|Ga0164305_12098695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300013105\|Ga0157369_10661224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1077	Open in IMG/M
3300015357\|Ga0134072_10003842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3161	Open in IMG/M
3300018431\|Ga0066655_10505096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300018433\|Ga0066667_10164856	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300018433\|Ga0066667_10414560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1092	Open in IMG/M
3300018468\|Ga0066662_11596359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300018482\|Ga0066669_10132576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1798	Open in IMG/M
3300018482\|Ga0066669_11092296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	720	Open in IMG/M
3300018482\|Ga0066669_11889397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300019888\|Ga0193751_1014973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3964	Open in IMG/M
3300020199\|Ga0179592_10422807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300021086\|Ga0179596_10496151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300021170\|Ga0210400_10001476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	23326	Open in IMG/M
3300021362\|Ga0213882_10203559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	816	Open in IMG/M
3300021432\|Ga0210384_10898086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	786	Open in IMG/M
3300021478\|Ga0210402_11116997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	716	Open in IMG/M
3300021560\|Ga0126371_11041892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	959	Open in IMG/M
3300021560\|Ga0126371_11876141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300021953\|Ga0213880_10176112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300025906\|Ga0207699_10157643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1508	Open in IMG/M
3300025915\|Ga0207693_10063447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2894	Open in IMG/M
3300025916\|Ga0207663_11233722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300026308\|Ga0209265_1055735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1209	Open in IMG/M
3300026315\|Ga0209686_1231128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300026318\|Ga0209471_1205846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300026322\|Ga0209687_1260060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300026490\|Ga0257153_1085829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300026529\|Ga0209806_1335352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300026547\|Ga0209156_10475518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300026548\|Ga0209161_10021804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4579	Open in IMG/M
3300026550\|Ga0209474_10188475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1322	Open in IMG/M
3300026550\|Ga0209474_10411043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300027388\|Ga0208995_1040532	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300027605\|Ga0209329_1059803	Not Available	817	Open in IMG/M
3300027669\|Ga0208981_1060499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	964	Open in IMG/M
3300027787\|Ga0209074_10267242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300031962\|Ga0307479_10300872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1586	Open in IMG/M
3300032205\|Ga0307472_100636956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	948	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.29%
Host-Associated	Host-Associated	4.76%
Engineered	Engineered	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.29%
Plants	Host-Associated → Plants	4.76%
Solid Waste	Engineered → Solid Waste	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.86%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.95%
Roots	Host-Associated → Plants → Roots	0.95%
Grass	Engineered → Solid Waste → Grass	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.52%
Loam	Environmental → Terrestrial → Soil → Loam	22.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.95%
Composting	Engineered → Solid Waste → Grass → Composting	0.95%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	37.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.95%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.90%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.95%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.95%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459020	Litter degradation NP2	Engineered	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2NP_02837690	2170459020	Switchgrass, Maize And Mischanthus Litter	EITGSNLLKGAAMTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRTGAP
JGIcombinedJ26739_1011232032	3300002245	Forest Soil	MRVSTFAEQLAVRLLAREGISAVWQLHLAAAAAYRDGYKRAAETVLEIADAAERELLER
Ga0062593_1006735202	3300004114	Soil	MTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRTRTP*
Ga0062595_1004158883	3300004479	Soil	VRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRTRTP*
Ga0062591_1020155002	3300004643	Soil	MTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERE
Ga0066672_101769902	3300005167	Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRSGTP*
Ga0066672_106650101	3300005167	Soil	MITVPTFAEKLAVRLLAREGISAVWQLHVAAATAYRDGYKRAAETVLEIADAAERELLERAHHS*
Ga0066677_105498781	3300005171	Soil	GAAMNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRADTP*
Ga0066673_104330162	3300005175	Soil	MMTVPTFAEKLAMRLLAREGISAVWQLHVAAATAYRDGYKRAAETVLEIADAAERELLERAHHS*
Ga0066679_109632581	3300005176	Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIA
Ga0066684_109580881	3300005179	Soil	MMTVSTFAEKLAVRLLAREGISAVWQLHVAAATAYRDGYKRAAETVLEIADAAERELLERAHHS*
Ga0066685_111163192	3300005180	Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRAGTP*
Ga0066678_104321182	3300005181	Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRADTP*
Ga0066671_109116212	3300005184	Soil	RLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRSGTP*
Ga0066675_101304861	3300005187	Soil	LLKGAAMNGPTFTESLAVRLLARDGIAAIWQLHIAAAAAYRDGYKRAAETVLQIADAAERELLGRAGTP*
Ga0066388_1016210353	3300005332	Tropical Forest Soil	GAAMTGPTFTETLAVRLLARDGIGAIWQLHVAAAAAYRDGYKRAAETVLQIADAAERELMGRPGAR*
Ga0070709_110180182	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GSNLLKGAAMTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRTGAP*
Ga0070709_116065392	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GSNLLKGAAMTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYERAAETVLQIADAAERELLGRTGAP*
Ga0070714_1005576301	3300005435	Agricultural Soil	MTGPTFTESLAVRLLARDGLAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRTGAP*
Ga0070713_1013024931	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRVLTFSEQLAVRLLAREGISAVWQLHLAAAAAYRDGYRRAAETVLEIADAAERELLERAHNL*
Ga0070711_1001251202	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRTGAP*
Ga0070711_1005145711	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EITGSNLLKGAAMTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYRRAAETVLEIADAAERELLERAHNS*
Ga0070705_1006720962	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTVPTFAEKLAVRLLAREGISAVWQLHVAAATAYRDGYKRAAETVLEIADAAERELLERAHHS*
Ga0070694_1006328162	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MMVPTFAEKLAVRLLAREGISAVWQLHVAAATAYRDGYKRAAETVLEIADAAERELLERAHHS*
Ga0066687_104372601	3300005454	Soil	MNGPTFTESLAVRLLARDGIAAIWQLHIAAAAAYRDGYKRAAETVLQIADAAERELLGRAGTP*
Ga0066661_103787643	3300005554	Soil	MMTVPTFAEKLAVRLLAREGISAVWQLHVAAATAYRDGYKRAAETVLEIADAAERELLERAHHS*
Ga0066692_101825133	3300005555	Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADA
Ga0066670_109237761	3300005560	Soil	KGAAMTGPTFTETLAVRLLARDGIGAIWQLHVAAAAAYRDGYKRAAETVLQIADAAERELMGRPGAR*
Ga0070664_1014833921	3300005564	Corn Rhizosphere	TGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRTRTP*
Ga0066705_105269932	3300005569	Soil	AVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRSGTP*
Ga0066708_101434151	3300005576	Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRADTPGKQGVNQPLRNAA*
Ga0066654_101126142	3300005587	Soil	MNGPTFTESLAVRLLARDGIAAIWQLHIAAAAAYRDGYQRAAETVLQIADAAERELLGRAGTP*
Ga0066903_1005320652	3300005764	Tropical Forest Soil	MTGPTFTETLAVRLLARDGIGAIWQLHVAAAAAYRDGYKRAAETVLQIADAAERELMSRAGAR*
Ga0066696_104827842	3300006032	Soil	MTGPTFTETLAVRLLARDGIGAIWQLHVAAAAAYRDGYKRAAETVLQIADAAERELMGRPGAR*
Ga0066656_104011841	3300006034	Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRTGSR*
Ga0066652_1011285083	3300006046	Soil	MTVPTFAEKLAVRLLAREGISAVWQLHVAAATAYRDGYKRAAETVLEIADAAERELLERAHYS*
Ga0070716_1000705682	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYERAAETVLQIADAAERELLGRTGAP*
Ga0070712_1007526401	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RLLARDGIAAIWQLHVAAAAAYRDGYERAAETVLQIADAAERELLGRTGAP*
Ga0070712_1012638231	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRVLTFSEQLAVRLLAREGISAVWQLHLAAAAAYRDGYRRAAETVLEIADAAERELL
Ga0097621_1013337432	3300006237	Miscanthus Rhizosphere	MTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYERAAETVLQIADAAERELLGRTRTPETGL*
Ga0079222_102263783	3300006755	Agricultural Soil	MTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLG
Ga0066660_102785621	3300006800	Soil	MKTSTFAEKLAVRLLAREGVSAIWQLHVAAATAYRDGYRRAAETVLEIADAAERELLERAHNP*
Ga0079221_107426422	3300006804	Agricultural Soil	MGSNLMKGAAMTGSTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRTGAP*
Ga0075436_1010493542	3300006914	Populus Rhizosphere	MTGPTFTESVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRTRTP*
Ga0066710_1017515762	3300009012	Grasslands Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRADTP
Ga0066710_1029808251	3300009012	Grasslands Soil	GPTFTESLAVRLLARDGIAAIWQLHIAAAAAYRDGYQRAAETVLQIADAAERELLGRSGT
Ga0066710_1037124071	3300009012	Grasslands Soil	MMTVPTFAEKLAVRLLAREGISAVWQLHVAAATAYRDGYKRAAETVLEIADAAERELLERAHHS
Ga0066709_1000122318	3300009137	Grasslands Soil	MVPTFAEKLAVRLLAREGISAVWQLHVAAATAYRDGYKRAAETVLEIADAAERELLERAHHS*
Ga0066709_1012333022	3300009137	Grasslands Soil	MTVFTFAEKIASELLACTGTPAVWQLHLVAATAYRDGNARAADSLLEIEDAAEREVLAAAATRQIE
Ga0099792_100009184	3300009143	Vadose Zone Soil	MKVPTFSEKLAVRLLAREGISAVWQLHIAAATAYRDGYRRAAETVLEIADAAERELLERAHHS*
Ga0126384_122090301	3300010046	Tropical Forest Soil	MTGQTFTETLAVRLLARDGIGAIWQLHVAAAAAYRDGYKRAAETVLQIADAAERELMSRAGAR*
Ga0099796_100992072	3300010159	Vadose Zone Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIAAAAERELLGRSGTP*
Ga0134082_101567212	3300010303	Grasslands Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRA
Ga0134109_100721491	3300010320	Grasslands Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRTGAP*
Ga0134084_100983322	3300010322	Grasslands Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRNGYQRPAETARQIADAAERELLGRSGTP*
Ga0134062_100041892	3300010337	Grasslands Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGHSGTP*
Ga0137383_100890503	3300012199	Vadose Zone Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYKRAAETVLQIADAAERELLGRAGTP*
Ga0137363_101487021	3300012202	Vadose Zone Soil	GAVHMKVPTFSEKLAVRLLAREGISAVWQLHIAAATAYRDGYRRAAETVLEIADAAERELLERAHHS*
Ga0150985_1004512061	3300012212	Avena Fatua Rhizosphere	AAMNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRSGTP*
Ga0137395_101543622	3300012917	Vadose Zone Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADEAERELLGRAGTP*
Ga0137394_105924391	3300012922	Vadose Zone Soil	MTVPTFAEKLAVRLLAREGISAVWQLHVAAATAYRDGYKRAADTVLEIADAAERELLERAHHS*
Ga0164300_109003722	3300012951	Soil	MTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAA
Ga0126369_105935102	3300012971	Tropical Forest Soil	MTGPTFTETLAVRLLARDGIGAIWQLHVAAAAAYRDGYKRSAETVLQIADAAERELMSRADAR*
Ga0164309_110902022	3300012984	Soil	VKGAAMNGPTFTESLAVRLLARDGIAAIWQLHIAAAAAYRDGYKRAAETVLQIADAAERELLGRTGAP*
Ga0164304_100787471	3300012986	Soil	MTGPTFTESLAVRLLARDGIAAIWQLHIAAAAAYRDGYKRAAETVLQIADAAERELLGRTGAP*
Ga0164305_120986951	3300012989	Soil	MTGPTFTESLAVRLLARDGIAAIWQLHIAAAAAYRDGYERAAETVLQIADAAERELLGRTGAP*
Ga0157369_106612242	3300013105	Corn Rhizosphere	MTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAER
Ga0134072_100038421	3300015357	Grasslands Soil	ITRSNLLKGAAMNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRSGTP*
Ga0066655_105050962	3300018431	Grasslands Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRAGTP
Ga0066667_101648563	3300018433	Grasslands Soil	MMVPTFAEKLAVRLLAREGISAVWQLHVAAATAYRDGYKRAAETVLEIADAAERELLERAHHS
Ga0066667_104145602	3300018433	Grasslands Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRSGTP
Ga0066662_115963591	3300018468	Grasslands Soil	NLLKGAAMNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRAGTP
Ga0066669_101325763	3300018482	Grasslands Soil	MTVPTFAEKLAVRLLAREGISAVWQLHVAAATAYRDGYKRAAETVLEIADAAERELLERAHHS
Ga0066669_110922961	3300018482	Grasslands Soil	LLKGAAMNGPTFTESLAVRLLARDGIAAIWQLHIAAATAYRDGYERAAETVLQIADAAERELLGRTGAP
Ga0066669_118893971	3300018482	Grasslands Soil	IKRSNLLKGAAMNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRSGTP
Ga0193751_10149735	3300019888	Soil	MTVPTFTEKLAVRLLARDGIGAIWQLHVAAAAAYRDGYKRAAETVLQIADAAERELLGRAGPS
Ga0179592_104228071	3300020199	Vadose Zone Soil	MKVPTFSEKLAVRLLAREGISAVWQLHIAAATAYRDGYRRAAETVLEIADAAERELLERAHHS
Ga0179596_104961511	3300021086	Vadose Zone Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYKRAAETVLQIADAAERELLGRAGTP
Ga0210400_1000147628	3300021170	Soil	MRVSTFAEQLAVRLLAREGISAVWQLHLAAAAAYRDGYKRAAETVLEIADAAERELLERAHDL
Ga0213882_102035592	3300021362	Exposed Rock	MAPPNFAEKLAVKLLARDGISAVWQLHVAAAAAFADGHRQAAETVLQI
Ga0210384_108980861	3300021432	Soil	MTLPTFTEKLAVRLLARDGIGAIWQLHVAAAAAYRDGYKRAAETVLQIADAAERELLGRAGPS
Ga0210402_111169972	3300021478	Soil	QSSRFAPLASEGRVRMRVSTFAEQLAVRLLEREGISAVWQLHLAAAAAYRDGYRRAAETVLEIADAAERELLERAHNS
Ga0126371_110418921	3300021560	Tropical Forest Soil	MTGPTFTETLAVRLLARDGIGAIWQLHVAAAAAYRDGYKRAAETVLQIADAAERELMSRAGAR
Ga0126371_118761412	3300021560	Tropical Forest Soil	MTVQTFAERIALELLAREGLAAIWQLHVAAATAYNDGYRRAAETVLEIADAAERELLLGYGNAD
Ga0213880_101761121	3300021953	Exposed Rock	MAPPNFAEKLAVKLLARDGISAVWQLHVAAAAAYADGHGRAAETVLEIAEAAERAL
Ga0207699_101576434	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ITGSNLLKGAAMTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRTGAP
Ga0207693_100634472	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYERAAETVLQIADAAERELLGRTGAP
Ga0207663_112337222	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VHDRAVAEVAAFAEQLAVRLLEREGISAVWQLHLAAAAAYRDGYRRAAETVLEIADAAERELLERAHNS
Ga0209265_10557352	3300026308	Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRANTP
Ga0209686_12311281	3300026315	Soil	AAMNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRADTP
Ga0209471_12058462	3300026318	Soil	EIKRSNLLKGAAMNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRADTP
Ga0209687_12600602	3300026322	Soil	MNGPTFTESLAVRLLARDGIAAIWQLHIAAAAAYRDGYKRAAETVLQIADAAERELLGRAGT
Ga0257153_10858291	3300026490	Soil	MRVSTFAEQLAVRLLAREGISAVWQLHLAAAAAYRDGYRRAAETVLEIADAAERELLERAHNS
Ga0209806_13353521	3300026529	Soil	GEIKRSNLLKGAAMNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRSGTP
Ga0209156_104755182	3300026547	Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAE
Ga0209161_100218044	3300026548	Soil	MNGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRTGTP
Ga0209474_101884753	3300026550	Soil	EIKRSNLLKGAAMNGPTFTESLAVRLLARDGIGAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRAGTP
Ga0209474_104110431	3300026550	Soil	MTGPTFTETLAVRLLARDGIGAIWQLHVAAAAAYRDGYKRAAETVLQIADAAERELMGRPGAR
Ga0208995_10405321	3300027388	Forest Soil	MKVPTFSEKLAVRLLAREGISAVWQLHIAAATAYRDGYRRAAETVLEIADAAERELLERA
Ga0209329_10598031	3300027605	Forest Soil	MRVSTFAEQLAVRLLAREGISAVWQLHLAAAAAYRDGYKRAAETVLEIADAAERELLERAHN
Ga0208981_10604991	3300027669	Forest Soil	MKVPTFSEKLAVRLLAREGISAVWQLHIAAATAYRDGYRRAAETVLEIADAAEREL
Ga0209074_102672422	3300027787	Agricultural Soil	MTGPTFTESLAVRLLARDGIAAIWQLHVAAAAAYRDGYQRAAETVLQIADAAERELLGRT
Ga0308309_116761762	3300028906	Soil	MTLPTFTEKLAVRLLARDGIGAIWQLHVAAAAAYRDGYKRAAETVLQI
Ga0307479_103008723	3300031962	Hardwood Forest Soil	LLEGRPDMTLPTFTEKLAVRLLARDGIGAIWQLHVAAAAAYRDGYKRAAETVLQIADAAERELLGRAGPS
Ga0307472_1006369561	3300032205	Hardwood Forest Soil	MTVPTFAEKLAVRLLAREGISAVWQLHVAAATAYRDGYKRAAETVIEIADAAERE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095969

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences