NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F095956

Metagenome Family F095956

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095956
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 50 residues
Representative Sequence MDYDSDEGRMTAAEQLAAHDPRAAAEALRAIACDDGVGDEVRLSAAEQ
Number of Associated Samples 79
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 22.33 %
% of genes near scaffold ends (potentially truncated) 88.57 %
% of genes from short scaffolds (< 2000 bps) 87.62 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (76.190 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(66.667 % of family members)
Environment Ontology (ENVO) Unclassified
(76.190 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(67.619 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.63%    β-sheet: 0.00%    Coil/Unstructured: 72.37%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF01022HTH_5 52.38
PF00106adh_short 2.86
PF00378ECH_1 1.90
PF00072Response_reg 0.95
PF13414TPR_11 0.95
PF13468Glyoxalase_3 0.95
PF11716MDMPI_N 0.95
PF01828Peptidase_A4 0.95
PF00534Glycos_transf_1 0.95
PF04978DUF664 0.95
PF00696AA_kinase 0.95
PF13649Methyltransf_25 0.95
PF00710Asparaginase 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0252L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit DTranslation, ribosomal structure and biogenesis [J] 1.90


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.14 %
UnclassifiedrootN/A22.86 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005445|Ga0070708_100594018All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300005445|Ga0070708_100834915All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales866Open in IMG/M
3300005764|Ga0066903_104867213All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales713Open in IMG/M
3300006173|Ga0070716_100340345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1058Open in IMG/M
3300007076|Ga0075435_100177024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1801Open in IMG/M
3300009400|Ga0116854_1064110All Organisms → cellular organisms → Bacteria1179Open in IMG/M
3300010358|Ga0126370_10314608All Organisms → cellular organisms → Bacteria1248Open in IMG/M
3300010361|Ga0126378_10642816All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300010361|Ga0126378_10721068All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300010366|Ga0126379_10131405All Organisms → cellular organisms → Bacteria2296Open in IMG/M
3300012198|Ga0137364_10475896All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300012207|Ga0137381_10187910All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1788Open in IMG/M
3300012209|Ga0137379_10607511All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1000Open in IMG/M
3300012209|Ga0137379_11381880All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300016294|Ga0182041_11787412Not Available570Open in IMG/M
3300016319|Ga0182033_10429379All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300016371|Ga0182034_10607729All Organisms → cellular organisms → Bacteria923Open in IMG/M
3300016387|Ga0182040_10386917All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300016404|Ga0182037_11273546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia647Open in IMG/M
3300016422|Ga0182039_11516168Not Available611Open in IMG/M
3300016445|Ga0182038_10829470All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300021362|Ga0213882_10325409Not Available643Open in IMG/M
3300021478|Ga0210402_10575776All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300021478|Ga0210402_10889565Not Available817Open in IMG/M
3300021560|Ga0126371_10133151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2527Open in IMG/M
3300021560|Ga0126371_11755403All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300025633|Ga0208480_1138428All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300025939|Ga0207665_10124495All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1824Open in IMG/M
3300026497|Ga0257164_1031914All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300031231|Ga0170824_115323080All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300031446|Ga0170820_16626003All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300031543|Ga0318516_10020842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3344Open in IMG/M
3300031543|Ga0318516_10348233All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300031561|Ga0318528_10097939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1537Open in IMG/M
3300031561|Ga0318528_10416252All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300031561|Ga0318528_10695156Not Available544Open in IMG/M
3300031640|Ga0318555_10439008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia707Open in IMG/M
3300031668|Ga0318542_10434670All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300031679|Ga0318561_10415659All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300031680|Ga0318574_10312166All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300031681|Ga0318572_10110736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae1560Open in IMG/M
3300031713|Ga0318496_10081304All Organisms → cellular organisms → Bacteria1718Open in IMG/M
3300031713|Ga0318496_10094242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini1601Open in IMG/M
3300031713|Ga0318496_10519244All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300031719|Ga0306917_11407892Not Available538Open in IMG/M
3300031723|Ga0318493_10064017All Organisms → cellular organisms → Bacteria1776Open in IMG/M
3300031736|Ga0318501_10177316All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1107Open in IMG/M
3300031747|Ga0318502_10113754All Organisms → cellular organisms → Bacteria1513Open in IMG/M
3300031751|Ga0318494_10441927All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300031751|Ga0318494_10560482All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300031764|Ga0318535_10285478All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300031764|Ga0318535_10385910All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300031765|Ga0318554_10256362All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300031769|Ga0318526_10138453All Organisms → cellular organisms → Bacteria987Open in IMG/M
3300031769|Ga0318526_10312854All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300031777|Ga0318543_10459829Not Available570Open in IMG/M
3300031778|Ga0318498_10475475Not Available551Open in IMG/M
3300031779|Ga0318566_10500964Not Available595Open in IMG/M
3300031782|Ga0318552_10686465Not Available522Open in IMG/M
3300031793|Ga0318548_10460464All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300031793|Ga0318548_10492088Not Available599Open in IMG/M
3300031794|Ga0318503_10294009Not Available527Open in IMG/M
3300031795|Ga0318557_10036108All Organisms → cellular organisms → Bacteria2023Open in IMG/M
3300031795|Ga0318557_10300171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia737Open in IMG/M
3300031797|Ga0318550_10621858Not Available518Open in IMG/M
3300031805|Ga0318497_10143183All Organisms → Viruses → Predicted Viral1305Open in IMG/M
3300031805|Ga0318497_10328862All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300031819|Ga0318568_10570093All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300031835|Ga0318517_10264049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces bingchenggensis777Open in IMG/M
3300031845|Ga0318511_10119439All Organisms → cellular organisms → Bacteria1134Open in IMG/M
3300031845|Ga0318511_10337015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces bingchenggensis685Open in IMG/M
3300031845|Ga0318511_10393131All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300031859|Ga0318527_10057898All Organisms → cellular organisms → Bacteria1527Open in IMG/M
3300031880|Ga0318544_10146232All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300031890|Ga0306925_10207061All Organisms → cellular organisms → Bacteria2116Open in IMG/M
3300031893|Ga0318536_10512984Not Available602Open in IMG/M
3300031896|Ga0318551_10143469All Organisms → cellular organisms → Bacteria1300Open in IMG/M
3300031910|Ga0306923_10105281All Organisms → cellular organisms → Bacteria3187Open in IMG/M
3300031947|Ga0310909_10134143All Organisms → cellular organisms → Bacteria2022Open in IMG/M
3300031981|Ga0318531_10069015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae1526Open in IMG/M
3300032001|Ga0306922_10349918All Organisms → cellular organisms → Bacteria1585Open in IMG/M
3300032008|Ga0318562_10160854All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1295Open in IMG/M
3300032010|Ga0318569_10002652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5824Open in IMG/M
3300032010|Ga0318569_10084721All Organisms → cellular organisms → Bacteria1416Open in IMG/M
3300032010|Ga0318569_10466108Not Available589Open in IMG/M
3300032025|Ga0318507_10522856Not Available516Open in IMG/M
3300032035|Ga0310911_10230423All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300032035|Ga0310911_10452856All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300032035|Ga0310911_10689527Not Available592Open in IMG/M
3300032042|Ga0318545_10276487All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300032052|Ga0318506_10320250All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300032054|Ga0318570_10405271Not Available622Open in IMG/M
3300032055|Ga0318575_10036296All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2195Open in IMG/M
3300032060|Ga0318505_10225565All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium880Open in IMG/M
3300032060|Ga0318505_10527144Not Available557Open in IMG/M
3300032065|Ga0318513_10641285Not Available520Open in IMG/M
3300032068|Ga0318553_10557160Not Available600Open in IMG/M
3300032076|Ga0306924_10054990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4404Open in IMG/M
3300032261|Ga0306920_100085181All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus ruber4656Open in IMG/M
3300032955|Ga0335076_10967716Not Available733Open in IMG/M
3300033290|Ga0318519_10130066All Organisms → cellular organisms → Bacteria1388Open in IMG/M
3300033290|Ga0318519_10163674All Organisms → cellular organisms → Bacteria1251Open in IMG/M
3300033290|Ga0318519_10753116All Organisms → cellular organisms → Bacteria597Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil66.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.38%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.71%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.81%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.95%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.95%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.95%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.95%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009400Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300021362Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025633Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026497Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-BEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070708_10059401813300005445Corn, Switchgrass And Miscanthus RhizosphereMDHDSDENRLTAAEQLATYEARAAAEAFLAIASDDGVGDEVRLSAAE
Ga0070708_10083491513300005445Corn, Switchgrass And Miscanthus RhizosphereMDYHTDDDPMTTAEQLAGHDPRAAAEAFHAIACDDGVGDELRLSAAEQLAALGSPAAA
Ga0066903_10486721333300005764Tropical Forest SoilMDYDNDEGRMTSAEQLAARDPRAAAEALRAIACDD
Ga0070716_10034034513300006173Corn, Switchgrass And Miscanthus RhizosphereMDYDSDEGRMTAAEQLAAHDPRAAAEALRAIACDDGVGDEVRLSAAEQ
Ga0075435_10017702453300007076Populus RhizosphereMDYDSDEGRITAAEQLATHDPRAAAEALRAIACDEGVGDEVRLSAAELLPAVDPRA
Ga0116854_106411013300009400SoilMDYDSDESRMTAAEQLAAHDPRAAAEALRAIACDDGVGDEVRLSA
Ga0126370_1031460823300010358Tropical Forest SoilMHYESDDDRMTTAERLAAHDPDAAAEACLAIACDDGVGDEVRLSAAELLTQIDPRAAAQSRL*
Ga0126378_1064281633300010361Tropical Forest SoilMHYESDDDRMTTAERLAAHDPDAAAEACLAIACDDGVGDEVRLSAAEQLPAIEPRAAAQA
Ga0126378_1072106813300010361Tropical Forest SoilDGVGDEVRLSAAELLPAIDPRAAAQACLAIACDDGVGDEVRLSAAELLPAIDPRAAAQSRL*
Ga0126379_1013140543300010366Tropical Forest SoilMHYESDDDRMTTAERLAAHDPDAAAEACLAIACDDGVGDEVRLSAAELLPAIDPRAAAQSRL*
Ga0137364_1047589613300012198Vadose Zone SoilMDYHTDDDPMTTAEQLAGHDPRAAAEAFHTIACDDGGG
Ga0137381_1018791013300012207Vadose Zone SoilMDYDTDDDRMTTAEQLAGHDPRAAAQACLSVACDGEVGDEVRLSA
Ga0137379_1060751133300012209Vadose Zone SoilMDYHADDNPMTSAEQLAAHDTRAAAEAFHAIACDDGVGDEMRLSAAEQLAALGS
Ga0137379_1138188013300012209Vadose Zone SoilMDYDSDEGRMTAAEQLAAHDPRAAAEALRAIACDD
Ga0182041_1178741213300016294SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAELLPGVDPQAAAHACLAIA
Ga0182033_1042937913300016319SoilMDYDSDEGRMAAAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAEQLPGL
Ga0182034_1060772933300016371SoilMDYDSDEGRMTTAEQLATHDPRAAAEALRAIACDDGVGDEVRLSAAEQLPALDPQA
Ga0182040_1038691713300016387SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSA
Ga0182037_1127354613300016404SoilMDYDSDEDRMTTAEQLAAHDPRAAAEALRAIACDDG
Ga0182039_1151616833300016422SoilMDYDSDEERMTTAEQLAAHDPRAAAEALRAIACDDGVGEEVRLSAAEQLAALGSPAVAQA
Ga0182038_1082947033300016445SoilMDYDCDEDRLTTAEQLAAHDPRAAAEALRAIACDDGVGEEVRLSAAELLPAVDP
Ga0213882_1032540913300021362Exposed RockMDYDTDDPMTAAEQLAAHDPRAAARACLAIATDDGVGDEVRLCAAELLPELDPRAAAQACLAIAT
Ga0210402_1057577613300021478SoilMHFHTDDDPMATAEQLTAHDPRAAAQGYLAIACYDGVADELRLSAAEQLPRLDPRAAAQGCLAIA
Ga0210402_1088956533300021478SoilLRLFAAELLPTVDRHAAAEACHAIACDDGVADEVRLSAAEQLAALGPRAAAEPS
Ga0126371_1013315133300021560Tropical Forest SoilMHYESDDDRMTTAERLAAHDPDAAAQACLAIACDDGVGDEVRLSAAELLPAIDPRAAAQSRL
Ga0126371_1175540313300021560Tropical Forest SoilVHYDSDDDRMATAEHLARHDPGGAADAFRSIACDGGVGDEVRLSAAEQLAALGSA
Ga0208480_113842813300025633Arctic Peat SoilMDYDSDEGRMTAAEQLAAHDPRAAAEAFRAIACDDGVGDEVRLAAAEMLP
Ga0207665_1012449563300025939Corn, Switchgrass And Miscanthus RhizosphereMDYDSDEGRMTAAEQLAAHDPRAAAAALRAIACDDGVGDEVRLSAAEQ
Ga0257164_103191433300026497SoilMDYHTDDDPMTTAEQLAGHDPRAAAEAFHTIACDDGVGDEVRLSAAEQLAALGSPAAA
Ga0170824_11532308013300031231Forest SoilMDYDSDEGRMTAAEQLAAHDPRAAAEALRAIAWSK
Ga0170820_1662600313300031446Forest SoilMDYHTDDDSMTTAEQLAGHDPRAAAEAFHAIACDDEVGDEIRAKF
Ga0318516_1002084213300031543SoilMDYDCDEDRLTTAEQLAAHDPRAAAEVCLAIARDGGVGDEVRLSAAELLPPLDPRAAAKAALAI
Ga0318516_1034823313300031543SoilMHYDCDEDRLTTAGQLAAHDPRAAAQACLAIASDDGVGDEVRLSAAELLPAID
Ga0318528_1009793933300031561SoilMHYDCDEDRLTTAGQLAAHDPRAAAQACLAIAGDDGVGDEVRLSAAELLSAATAPRS
Ga0318528_1041625233300031561SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAEQLPA
Ga0318528_1069515623300031561SoilMDYDSDEGRMAAAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAEQ
Ga0318555_1043900813300031640SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAELLPGVD
Ga0318542_1043467033300031668SoilMDYDSDEGRMTTAEQLATHDPRAAAEALRAIACDDGVGDEVRLSAAELLPALDP
Ga0318561_1041565933300031679SoilMDYDSDEGRMTEAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAELLPG
Ga0318574_1031216633300031680SoilMDYDCDEDRLTTAEHLAAHDPRAAAQACLAIACDDGVGDEVRLS
Ga0318572_1011073613300031681SoilMDYDSDEDRMTTAEQLAAHDPRAAAEALRAIACDDGVG
Ga0318496_1008130413300031713SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAELLPGVDPQAAAQA
Ga0318496_1009424243300031713SoilMHYDCDEDRLTTAGQLAAHDPRAAAQACLAIASDDGVGDE
Ga0318496_1051924433300031713SoilMDYDGDEDRLTTAEQLAAHDPCAAAAACLAIACDAGVGDEVRL
Ga0306917_1140789213300031719SoilMDYDSDEGRMAAAEQLAAHHPRAAAGALRAIACDDGVGDEVRL
Ga0318493_1006401713300031723SoilMDYDCDEDRLTTAEQLAAHDPRAAAQACLAIACDDGVGDEVRLSAAELLPALDPRAGAQA
Ga0318501_1017731623300031736SoilMDYDCDEDRLTTAGQLAGHDPQAAAQACLAIASDDGVGDEVRLSAAELLSAAVDR
Ga0318502_1011375443300031747SoilMDYDSDEGRMTTAEQLATHDPRAAAEALRAIACDDGVGDEVRLSA
Ga0318494_1044192713300031751SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGE
Ga0318494_1056048233300031751SoilMDYDCDEDRLTTAEQLAAHDPRAAAEVCLAIARDGGVGDEVRLSAAELL
Ga0318535_1028547833300031764SoilMHYDCDEDRLTTAGQLAAHDPRAAAQACLAIASDDGVGDEVRLSAAELLP
Ga0318535_1038591033300031764SoilMDYDSDEGRMTTAEQLATHDPRAAAEALRAIACDDGVGDEVRLSAAE
Ga0318554_1006030753300031765SoilMDHDCDEDRLTTAEQLAGHSPSAAAQALSAIACDG
Ga0318554_1025636213300031765SoilMDYDSDEGRMTEAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAELLPGVDPQAAAQA
Ga0318526_1013845333300031769SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAEQLPALDPQAA
Ga0318526_1031285413300031769SoilMDYDCDEDRLTTADKLAAHDPGAAAAACLAIARDGGVGD
Ga0318543_1045982913300031777SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGEEVRLSAAELLPGVDPQAAA
Ga0318498_1047547523300031778SoilMDYDGDEDRLTTAEQLAAHDPCAAAAACLAIACDAGVGDEVRLSAADLLPALDP
Ga0318566_1050096433300031779SoilMDYDNDEGRMTSAEQLAARDPRAAAEALRAIACDDGVGDEVRLSAAELLPALDPQAAAQA
Ga0318552_1068646513300031782SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGV
Ga0318548_1046046433300031793SoilMDYDCDEDRLTTAEQLAAHDPRAAAQACLAIACDDGVGDEVRLSAAELLP
Ga0318548_1049208833300031793SoilMHYDCDEDRLTTAGQLAAHDPRAAAQACLAIASDDGVGDEVRLSAAELLPAIDPRAAARQAW
Ga0318503_1029400933300031794SoilMDYDSDEGRMTTAEQLATHDPRAAAEALRAIACDDGVGD
Ga0318557_1003610813300031795SoilMDYDSDEGRMTTAEQLATHDPRAAAEALRAIACDDGVGDEVRLSAAELLPALD
Ga0318557_1030017113300031795SoilMHYDCDEDRLTTAGQLAAHDPRAAAQACLAIASDDGVGDEVR
Ga0318550_1062185813300031797SoilMDYDGDEDRLTTAEQLAAHDPCAAAAACLAIACDAGVGDEV
Ga0318497_1014318313300031805SoilMDYDCDEDRLTTAEQLAAHDPRAAAEVCLAIARDGGVGDE
Ga0318497_1032886213300031805SoilMDYDCDEDRLTTAEQLAAHDPRAAAQACLAIACDDGVGDEVRLSA
Ga0318568_1057009313300031819SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGEE
Ga0318517_1026404933300031835SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGEEVRLSAAEQLPALDPQAAAQA
Ga0318511_1011943913300031845SoilMDYDCDEDRLTTAGQLAGHDPRAAAAACLAIACDNAVG
Ga0318511_1033701533300031845SoilMDYDCDEDRLTTAEQLAAHDPRAAAQACLAIACDDGVGDEVRLSAAELL
Ga0318511_1039313133300031845SoilMDYDNDEGRMTSAEQLAARDPRAAAEALRAIACDDGVGDEVRLSAAELL
Ga0318527_1005789843300031859SoilMDYDSDEGRMTTAEQLATHDPRAAAEALRAIACDDGVGDEVRLSAAELLPALDPQAA
Ga0318544_1014623233300031880SoilMDYDSDEGRMTTAEQLATHDPRAAAEALRAIACDDGVGDEVRLSAAELLPALDPQAAAQA
Ga0306925_1020706113300031890SoilMDYDSDEGRMTEAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAELLPGVD
Ga0318536_1051298413300031893SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAELLPAL
Ga0318551_1014346913300031896SoilMHYDCDEDRLTTAGQLAAHDPRAAAQACLAIASDDGVGDEVRLS
Ga0306923_1010528113300031910SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAEQLPALDPQAAAQA
Ga0310909_1013414343300031947SoilMDYDSDEGRMTTAEQLATHDPRAAAEALRAIACDDGVGDEVRLSAAEL
Ga0318531_1006901543300031981SoilMDYDSDEGRMAAAEQLAAHHPRAAAEALRAIACDDGVGDE
Ga0306922_1034991853300032001SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAELLPGVDPQAAAHACLA
Ga0318562_1016085443300032008SoilMDYDSDEGRMTTAEQLATHDPRAAAEALRAIACDDGVGDEVRLSAAELLPAVDP
Ga0318569_1000265273300032010SoilMDYDSDEGRMTTAEQLATHDPRAAAEALRAIACDDGVGDEVRLSAAELLG
Ga0318569_1008472143300032010SoilMDHDCDEDRLTTAEQLAGHSPSAAAQALSAIACDGEVGGEVRLSAAERLAELDPVAAA
Ga0318569_1046610833300032010SoilMDYDSDEGRMTEAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAELLPGVDPQ
Ga0318507_1052285613300032025SoilMHYDCDEDRLTTAGQLAAHDPRAAAQACLAIASDDGVGDEVRLSAAELLPAIDPRAAAQA
Ga0310911_1023042313300032035SoilMDYDCDEDRLTTAEQLAAHDPRAAAQACLAIACDDGV
Ga0310911_1045285613300032035SoilMDYDCDEDRLTTAGQLAGHDPRAAAAACLAIACDNAVGDEVRLSAAELLPALDPQAA
Ga0310911_1068952713300032035SoilMDYDSDEGRMAAAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAEQLPGLD
Ga0318545_1027648733300032042SoilMDYDCDEDRLTTAEQLAAHDPRAAAQACLAIACDDGVGDEVRL
Ga0318506_1032025013300032052SoilMDYDSDEGRMTAAEQLAAHDPRAAAEALRAIACDDGVGDEVRLSAAEQLPALD
Ga0318570_1040527133300032054SoilMDYDCDEDRLTTAEQLAAHDPRAAAEVCLAIARDGGVGDEVRLSAAELLPPLDPRAAAKAALAIA
Ga0318575_1003629653300032055SoilMDHDCDEDRLTTAEQLAGHSPSAAAQALSAIACDGEVGGEVRLSAAERLA
Ga0318505_1022556523300032060SoilMDYDSDEGRMAAAEQLAAHHPRAAAEALRAIACDDGVGDEVRLSAAELLPAVDPHAARL
Ga0318505_1052714433300032060SoilMDYDCDEDRLTTAEQLAAHDPGAAAAACLAVARDGGVGDEVRL
Ga0318510_1013477433300032064SoilMDHDCDEDRLTTAEQLAGHSPSAAAQALSAIACDGE
Ga0318513_1064128513300032065SoilMDYDSDEGRMTAAEQLAAHHPRAAAEALRAIACDDGVGEEVRLSAAEQLP
Ga0318553_1055716013300032068SoilMDYDCDEDRLTTAEQLAAHDPRAAAQACLAIACDDGVGDEVRLSAAELLSAAVDR
Ga0306924_1005499043300032076SoilMDYDCDEDRLTTAGQLAGHDPRAAAQACLAIASDDGVGDEVRLSAAELLSAAVDR
Ga0306920_10008518113300032261SoilMHYDCDEDRLTTAGQLAAHDPRAAAQACLAIASDDGVG
Ga0335076_1096771623300032955SoilMDYDSDEGRMTAAGQLAAYDQRPAAEAFRAIACDDGVADEVRLSAEAGLTAS
Ga0318519_1013006643300033290SoilMDHDCDEDRLTTAEQLAGHSPSAAAQALSAIACDGEVGGEVRLSADLT
Ga0318519_1016367443300033290SoilMHYDCDEDRLTTAGQLAAHDPRAAAQACLAIASDDGVGDEVRLSAAELL
Ga0318519_1075311613300033290SoilMDYDCDEDRLTTAEQLAAHDPRAAAEVCLAIARDGGVGDEVR


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