NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F095941

Metagenome / Metatranscriptome Family F095941

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095941
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 46 residues
Representative Sequence MSTDISFCPLCAGKLDAGDDEQFVCEDCESQFFIQVVEEGDEDDEDEEL
Number of Associated Samples 89
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 78.64 %
% of genes near scaffold ends (potentially truncated) 45.71 %
% of genes from short scaffolds (< 2000 bps) 87.62 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (68.571 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(13.333 % of family members)
Environment Ontology (ENVO) Unclassified
(21.905 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.524 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.90%    β-sheet: 15.58%    Coil/Unstructured: 80.52%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF03641Lysine_decarbox 24.76
PF01695IstB_IS21 10.48
PF04545Sigma70_r4 8.57
PF00166Cpn10 4.76
PF00196GerE 1.90
PF04389Peptidase_M28 1.90
PF00118Cpn60_TCP1 0.95
PF13360PQQ_2 0.95
PF01554MatE 0.95
PF00375SDF 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG1611Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) familyNucleotide transport and metabolism [F] 24.76
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 10.48
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 4.76
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.95

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms68.57 %
UnclassifiedrootN/A31.43 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000559|F14TC_102057975All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300000955|JGI1027J12803_100147158Not Available910Open in IMG/M
3300004463|Ga0063356_105792015Not Available530Open in IMG/M
3300005166|Ga0066674_10553695All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300005172|Ga0066683_10710128Not Available595Open in IMG/M
3300005174|Ga0066680_10827973All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium555Open in IMG/M
3300005175|Ga0066673_10899388Not Available504Open in IMG/M
3300005331|Ga0070670_102213921All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300005332|Ga0066388_106735418All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300005332|Ga0066388_106961331All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300005343|Ga0070687_101163546All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300005444|Ga0070694_100646967All Organisms → cellular organisms → Bacteria → Acidobacteria855Open in IMG/M
3300005450|Ga0066682_10792561Not Available573Open in IMG/M
3300005451|Ga0066681_10435804All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300005466|Ga0070685_10959341Not Available639Open in IMG/M
3300005552|Ga0066701_10738608All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium589Open in IMG/M
3300005554|Ga0066661_10613472Not Available645Open in IMG/M
3300005557|Ga0066704_10303262Not Available1079Open in IMG/M
3300005561|Ga0066699_10946787All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300005566|Ga0066693_10460437All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300005586|Ga0066691_10859735Not Available534Open in IMG/M
3300005719|Ga0068861_102646247All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300005764|Ga0066903_108384139All Organisms → cellular organisms → Bacteria → Proteobacteria528Open in IMG/M
3300005829|Ga0074479_10226675All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5641Open in IMG/M
3300005840|Ga0068870_10561146All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300006046|Ga0066652_102098901All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300006173|Ga0070716_100641256All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300006358|Ga0068871_102039370Not Available546Open in IMG/M
3300006854|Ga0075425_100443438All Organisms → cellular organisms → Bacteria1495Open in IMG/M
3300006865|Ga0073934_10000734All Organisms → cellular organisms → Bacteria88889Open in IMG/M
3300006881|Ga0068865_101632815All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300007265|Ga0099794_10581742Not Available592Open in IMG/M
3300009012|Ga0066710_100285780All Organisms → cellular organisms → Bacteria2408Open in IMG/M
3300009012|Ga0066710_100815717All Organisms → cellular organisms → Bacteria1431Open in IMG/M
3300009012|Ga0066710_101433978Not Available1069Open in IMG/M
3300009012|Ga0066710_104095263All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300009012|Ga0066710_104095264All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300009146|Ga0105091_10740934All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300009147|Ga0114129_13431694Not Available509Open in IMG/M
3300009156|Ga0111538_10629560All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300009777|Ga0105164_10181149All Organisms → cellular organisms → Bacteria1072Open in IMG/M
3300010043|Ga0126380_10278878All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300010043|Ga0126380_11308557Not Available631Open in IMG/M
3300010046|Ga0126384_10282606All Organisms → cellular organisms → Bacteria1356Open in IMG/M
3300010133|Ga0127459_1056163All Organisms → cellular organisms → Bacteria → Acidobacteria2081Open in IMG/M
3300010142|Ga0127483_1117622Not Available590Open in IMG/M
3300010320|Ga0134109_10465494Not Available516Open in IMG/M
3300010361|Ga0126378_11315739All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300010391|Ga0136847_10965552All Organisms → cellular organisms → Bacteria → Acidobacteria704Open in IMG/M
3300010400|Ga0134122_10978699All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300010400|Ga0134122_11836646All Organisms → cellular organisms → Bacteria → Acidobacteria639Open in IMG/M
3300010401|Ga0134121_10836972All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300010401|Ga0134121_11287812All Organisms → cellular organisms → Bacteria → Acidobacteria736Open in IMG/M
3300010403|Ga0134123_12433450Not Available589Open in IMG/M
3300011120|Ga0150983_13852102All Organisms → cellular organisms → Bacteria3210Open in IMG/M
3300011120|Ga0150983_13871790All Organisms → cellular organisms → Bacteria → Acidobacteria649Open in IMG/M
3300011120|Ga0150983_15170075All Organisms → cellular organisms → Bacteria → Acidobacteria554Open in IMG/M
3300012206|Ga0137380_10008780All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria9133Open in IMG/M
3300012206|Ga0137380_11539812All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300012208|Ga0137376_10814366Not Available803Open in IMG/M
3300012212|Ga0150985_101981647All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M
3300012212|Ga0150985_108896141All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300012212|Ga0150985_115950896All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5320Open in IMG/M
3300012232|Ga0137435_1085835All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300012351|Ga0137386_10056082All Organisms → cellular organisms → Bacteria2729Open in IMG/M
3300012469|Ga0150984_106782590All Organisms → cellular organisms → Bacteria → Acidobacteria621Open in IMG/M
3300012469|Ga0150984_116606163All Organisms → cellular organisms → Bacteria → Acidobacteria634Open in IMG/M
3300012469|Ga0150984_121334418All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300013297|Ga0157378_11224132All Organisms → cellular organisms → Bacteria → Acidobacteria791Open in IMG/M
3300014157|Ga0134078_10523987Not Available555Open in IMG/M
3300014968|Ga0157379_10987075All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300015371|Ga0132258_11810986All Organisms → cellular organisms → Bacteria1538Open in IMG/M
3300015371|Ga0132258_12443977All Organisms → cellular organisms → Bacteria1308Open in IMG/M
3300015374|Ga0132255_103190753All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii699Open in IMG/M
3300016341|Ga0182035_11462153Not Available614Open in IMG/M
3300016387|Ga0182040_10384877Not Available1097Open in IMG/M
3300017966|Ga0187776_11354420Not Available540Open in IMG/M
3300017970|Ga0187783_10137845All Organisms → cellular organisms → Bacteria1798Open in IMG/M
3300018060|Ga0187765_10311122All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300018071|Ga0184618_10152074Not Available946Open in IMG/M
3300018422|Ga0190265_13233094Not Available544Open in IMG/M
3300018431|Ga0066655_10301840All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300019458|Ga0187892_10060979All Organisms → cellular organisms → Bacteria2492Open in IMG/M
3300021080|Ga0210382_10548771All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300021178|Ga0210408_10678155All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300021476|Ga0187846_10389745Not Available573Open in IMG/M
3300022563|Ga0212128_10780038All Organisms → cellular organisms → Bacteria → Acidobacteria569Open in IMG/M
3300022756|Ga0222622_11429881Not Available509Open in IMG/M
3300025174|Ga0209324_10689993All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300025310|Ga0209172_10000767All Organisms → cellular organisms → Bacteria81921Open in IMG/M
3300025324|Ga0209640_11011937All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300025908|Ga0207643_10571816All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300025939|Ga0207665_10453724All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300026116|Ga0207674_11300335All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium697Open in IMG/M
3300026538|Ga0209056_10026986All Organisms → cellular organisms → Bacteria5493Open in IMG/M
3300027815|Ga0209726_10204057Not Available1039Open in IMG/M
3300027874|Ga0209465_10414473Not Available674Open in IMG/M
3300027895|Ga0209624_10748353All Organisms → cellular organisms → Bacteria → Acidobacteria643Open in IMG/M
3300028802|Ga0307503_10854475All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300031573|Ga0310915_10747811Not Available689Open in IMG/M
3300031720|Ga0307469_12055203Not Available555Open in IMG/M
3300032261|Ga0306920_101450926Not Available982Open in IMG/M
3300033433|Ga0326726_10392817All Organisms → cellular organisms → Bacteria1315Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil13.33%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.71%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.76%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.76%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.81%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.86%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.86%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.86%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.86%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere2.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.86%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.86%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.86%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.90%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.90%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.95%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.95%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.95%
WastewaterEnvironmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater0.95%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.95%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.95%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.95%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.95%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.95%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.95%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.95%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.95%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.95%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.95%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.95%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.95%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.95%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009777Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking waterEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010133Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010142Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012232Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2EnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025174Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3EnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10205797533300000559SoilMSTEISFCPVCAGKLDANEDEQYVCEDCESQFFIQLLEEGDEDDDDEEYLPAHADRG
JGI1027J12803_10014715823300000955SoilMPTEISFCPMCAGKLDAGDDEQFVCEECETEFFIQV
Ga0055471_1023573823300003987Natural And Restored WetlandsMKTEISFCPTCAGKLDVAEDDQFQCEDCETRFYIQIAEEGDDGEDDE
Ga0063356_10579201523300004463Arabidopsis Thaliana RhizosphereMKAEISFCPLCAGKLDAGEDEQFVCEDCESQFFIQLVEGDDEDEDEE*
Ga0066674_1055369513300005166SoilMKTDISFCPLCAGKLDAGEDEQFVCEDCETQFFIQIAEAGEDEEEDEEL*
Ga0066683_1071012813300005172SoilMKTEISFCPLCAGKLDAGDDEQFVCEDCETQFFIQVVEEGEDEDEDEEY*
Ga0066680_1082797323300005174SoilMSAEISFCPLCAGKLDAGDDEQFICEDCETQFFIQVVEEGDDEEEDEEF*
Ga0066673_1089938823300005175SoilMSTDISFCPLCAGKLDAGDDEQFVCEDCESQFFIQVVEEGDEDEDDEES*
Ga0070670_10221392123300005331Switchgrass RhizosphereMKTDISFCPLCAGKLDAGEDEQFVCEDCESQFFIQLVEEGDEDDEDEEL*
Ga0066388_10673541823300005332Tropical Forest SoilMTTEISFCPMCAGKLDAGDDEQFVCEDCETEFFIQVLEEGDEDDEDEEL*
Ga0066388_10696133123300005332Tropical Forest SoilMTTEISFCPMCAGKLDAGDDEQFVCEDCETEFFIQVLEEGDEDEDEDEG*
Ga0070687_10116354623300005343Switchgrass RhizosphereMSTEVSFCPLCAGKLDSEKDDRFVCDDCETRFFIQVVDEEDDE
Ga0070694_10064696723300005444Corn, Switchgrass And Miscanthus RhizosphereMKTEISFCPMCAGKLDAGEDEQFVCEDCETSFFIQIAEEGDEDDEDEE*
Ga0066682_1079256123300005450SoilMKTDISFCPMCAGKLDAGEDEQFVCEDCESSFFIQVVEAGEDDDEEEEL*
Ga0066681_1043580423300005451SoilMSTEISFCPLCAGKLDSGEDEQFVCEDCETSFFIQIVEDGDEDEEEEE*
Ga0070685_1095934123300005466Switchgrass RhizosphereMSTEISFCPLCAGKLDASEDEQFVCEDCEGQFFIQVLEEGDEEDED
Ga0066701_1073860823300005552SoilMSAEISFCPLCAGKLDAGDDEQFICEDCETQFFIQVVEEGDDEEEDEEI*
Ga0066661_1061347213300005554SoilMCAGKLDAGDDEQFVCEDCETSFFIQVVEEGDEDEE
Ga0066704_1030326213300005557SoilMSTEISFCPVCAGKLDAGDDEQFVCEDCETSFFIQVVEEGEGDE
Ga0066699_1094678723300005561SoilMKTDISFCPLCAGKLDAGEDEQFVCEDCESSFFIQLVEAGEEDDEDEEA*
Ga0066693_1046043723300005566SoilMKTDISFCPLCAGKLDAGEDEQFVCEDCESSFFIQLVEAGEEDDEEEEA*
Ga0066691_1085973523300005586SoilMSTEISFCPVCAGKLDAGDDEQFVCEDCETSFFIQVVEEG
Ga0068861_10264624723300005719Switchgrass RhizosphereMKTEISFCPLCAGKLDAGDDEQFVCEDCESQFFIQIVEEGDEDEDEDE*
Ga0066903_10838413913300005764Tropical Forest SoilMTTEISFCPMCAGKLDAGDDEQFVCEDCETEFFIQVLEEGDEDEEE
Ga0074479_1022667553300005829Sediment (Intertidal)MKTEISFCPLCAGKLDTGDDEQYTCEDCEGKFFIQVVNEGEEDEDDDEE*
Ga0068870_1056114633300005840Miscanthus RhizosphereMSVEISFCPLCAGKLDSGNNDKFVCDDCETRFLIQVVDED
Ga0066652_10209890123300006046SoilPMCAGKLDSGEDEQFVCEDCETSFFIQVAEEGDEDDDEEE*
Ga0070716_10064125613300006173Corn, Switchgrass And Miscanthus RhizosphereMSTEISFCPLCAGKLDASEDEQFLCEDCETSFFIQVVEEGEDDEEEE
Ga0068871_10203937023300006358Miscanthus RhizosphereMGAEISFCPLCAGKLDAGDDEQYVCEDCESQFFIQVVE
Ga0075425_10044343833300006854Populus RhizosphereMSTEISFCPLCAGKLDSGEDEQFVCEDCETSFFIQVVEEGD
Ga0073934_10000734403300006865Hot Spring SedimentMSTDISFCPSCAGKLDAGDDDQFTCQDCEAEFLIQIVEEGADLDDEEDDEY*
Ga0068865_10163281523300006881Miscanthus RhizosphereMSTEISFCPACAGKLDAGEDEQYVCEDCESQFFIQLLEEGDEDEDDEE*
Ga0099794_1058174223300007265Vadose Zone SoilMSTEISFCPLCAGKLDSGEDEQFVCEDCETSFFIQVVEDGDEDEEDEE*
Ga0066710_10028578033300009012Grasslands SoilMSTDISFCPLCAGKLAAGEDEQFVCEDCETEFFIQVVEEGDEDDE
Ga0066710_10081571733300009012Grasslands SoilMSAEISFCPLCAGKLDAGDDEQFICEDCETQFFIQVVEEGDDEE
Ga0066710_10143397823300009012Grasslands SoilMGSEISFCPRCAGKLDSGEDEQFVCEDCETQFFIQVVEEGDEDDED
Ga0066710_10409526313300009012Grasslands SoilISFCPLCAGKLDAGDDEQFICEDCETQFFIQVVEEGDDEEEDEEI
Ga0066710_10409526413300009012Grasslands SoilISFCPLCAGKLDAGDDEQFICEDCETQFFIQVVEEGDDEEEDEEF
Ga0105091_1074093413300009146Freshwater SedimentMKTDITFCPMCAGKLDAGEDEQFVCEECEAQFFIQVVDDGDDDEEEEAEP*
Ga0114129_1343169423300009147Populus RhizosphereMSAEISFCPVCAGKLDASEDEQFVCEDCEGQFFIQVLEEGDE
Ga0111538_1062956013300009156Populus RhizosphereMTTEISFCPMCAGKLDAGDDEQFVCEECETEFFIQVME
Ga0105164_1018114923300009777WastewaterMSAEISFCPLCAGKLDSGEDEQFVCQDCESSFFIQIVEEGDEDEDEDE*
Ga0126380_1027887813300010043Tropical Forest SoilMSTEISFCPVCAGKLDANEDEQYVCEDCESQFFIQ
Ga0126380_1130855713300010043Tropical Forest SoilMTTEISFCPMCAGKLDAGDDEQFVCEDCETEFFIQV
Ga0126384_1028260633300010046Tropical Forest SoilMSTEISFCPVCAGKLDAGDDEQFVCEDCETSFFIQVVEEGEGDEEEEE
Ga0127459_105616313300010133Grasslands SoilMSTEISFCPVCAGKLDAGDDEQFVCEDCETSFFIQVVEE
Ga0127483_111762223300010142Grasslands SoilMKTEISFCPLCAGKLDAGEDEQFNCEDCETQFFIQVVEEGEDDEGEES*
Ga0134109_1046549423300010320Grasslands SoilMSAEISFCPLCAGKLDAGDDEQFICEDCETQFFIQVVGEADDEEEDEEF*
Ga0126378_1131573913300010361Tropical Forest SoilMSTEISFCPVCAGKLDAGDDEQFVCEDCETSFFIQ
Ga0136847_1096555213300010391Freshwater SedimentMSAEISFCPLCAGKLDSGEDEQFVCEDCEATFFIQVVDAGDEDEDEEDN*
Ga0134122_1097869923300010400Terrestrial SoilMKTEISFCPMCAGKLDAGDDEQFVCEDCETSFFIQVAEEGDEDDEDEE*
Ga0134122_1183664623300010400Terrestrial SoilMKTDISFCPLCAGKLDAGEDEQFVCEDCESQFFIQLVEEGDEDDEDDEL*
Ga0134121_1083697223300010401Terrestrial SoilMATEISFCPVCAGKLDAGDDEQFVCEDCESAFFIQIVEEGDEDDE
Ga0134121_1128781223300010401Terrestrial SoilMKTDISFCPLCAGKLDAGEDEQFVCEDCETHFFIQVAEAGEEDEEDEEL*
Ga0134123_1243345023300010403Terrestrial SoilMKTDISFCPMCAGKLESGDEDQFVCEDCESQFLIEVLEEGDADADEDEE*
Ga0150983_1385210223300011120Forest SoilMCAGKLDAGDDEQFVCEDCETSFFIQVVEEGDEDDEEDEY*
Ga0150983_1387179023300011120Forest SoilLCAGKLDAGEDEQFVCEDCESSFFIQIVEEGEDDDDDEEA*
Ga0150983_1517007513300011120Forest SoilMKTDISFCPLCAGKLDAGEDEQFVCEDCESSFFIQIVEEGEDDDEDEDA*
Ga0137380_1000878013300012206Vadose Zone SoilMSAEISFCPLCAGKLDAGDDEQFICEDCETQFFIQVVEE
Ga0137380_1153981213300012206Vadose Zone SoilKMSAEISFCPLCAGKLDAGDDEQFICEDCETQFFIQVVEEGDDEEEDEEF*
Ga0137376_1081436623300012208Vadose Zone SoilMKTDISFCPSCAGKLDAGEEEQFVCEDCETHFFIQIVEEGEDDDDDEE*
Ga0150985_10198164723300012212Avena Fatua RhizosphereMSTEISFCPLCAGKLDAGDDEQYVCEYCESQFFIQVVEEGDEDEEDEE*
Ga0150985_10889614123300012212Avena Fatua RhizosphereMSAEISFCPLCAGKLDSGEDEQFICEDCESSFFIQVVADGDEDEEDEEE*
Ga0150985_11595089673300012212Avena Fatua RhizosphereMKTDISFCPMCAGKLESGDEDQFVCEECESQFLIEVLEAGDADEDEDEE*
Ga0137435_108583523300012232SoilMSTEISFCPVCAGKLDASEDEQYVCEDCEGQFFIQVLQEGDEDEDDEES*
Ga0137386_1005608223300012351Vadose Zone SoilMSTDISFCPLCAGKLDAGDDEQFVCEDCESQFFIQVVEEGDEDDEDEEL*
Ga0150984_10678259013300012469Avena Fatua RhizosphereMSAEISFCPLCAGKLDSGEDEQFICEDCESSFFIQVVADGDEDEEDDEE*
Ga0150984_11660616313300012469Avena Fatua RhizosphereMKTDISFCPLCAGKLDAGEDEQFVCEDCESSFFIQLVEAGEDDDEDEE*
Ga0150984_12133441813300012469Avena Fatua RhizosphereMKTDISFCPMCAGKLEAGDEDQFVCEECESQFLIEVLEAGDADEDEDEE*
Ga0157378_1122413213300013297Miscanthus RhizosphereMKTDISFCPLCAGKLDAGEDEQFVCEDCESQFFIQLVEGDEDEEDEEV*
Ga0134078_1052398713300014157Grasslands SoilMSAEISFCPLCAGKLDAGDDEQFICEDCETQFFIQVV
Ga0157379_1098707533300014968Switchgrass RhizosphereMSVEISFCPLCAGKLDSGNNDKFVCDDCETRFLIQVVDEDDEDDE
Ga0132258_1181098613300015371Arabidopsis RhizosphereMSAEISFCPVCAGKLEAGDEDQFVCEECESQFLIEVLEEGDSDEE
Ga0132258_1244397723300015371Arabidopsis RhizosphereMSTEISFCPLCAGKLDSGDDEQYICEDCESQFFIQVVEEGDEDEDDEE*
Ga0132255_10319075323300015374Arabidopsis RhizosphereMSTEISFCPLCAGKLDSESDERFQCEDCETQFLIQVVDS
Ga0182035_1146215323300016341SoilMSAEISFCPLCAGKLDSGDDEQYICEDCESQFFIQVVEEGDEDEED
Ga0182040_1038487733300016387SoilMSAEISFCPLCAGKLDAGDDEQYVCEDCESQFFIQVVEEGDED
Ga0187776_1135442023300017966Tropical PeatlandMSAEISFCPLCAGKLDAGDDEQYVCEDCESEFFIQVVEEGDEDEEDE
Ga0187783_1013784533300017970Tropical PeatlandMSTEISFCPLCAGKLDAGDDEQFICEDCETGFFIQVVEEGEGEDEDEEY
Ga0187765_1031112223300018060Tropical PeatlandMSTEISFCPLCAGKLDSGDDEQYVCEDCESQFFIQVVEEGDEDEDEDE
Ga0184618_1015207423300018071Groundwater SedimentMSTDISFCPLCDGRLAAGEDEQFVCGDCETEFFSQVVEE
Ga0190265_1323309423300018422SoilMSTDISFCPLCAGKLDAGEDEQFVCEDCESSFFIQVVDEGDEDEDDEE
Ga0066655_1030184023300018431Grasslands SoilMKTEISFCPLCAGKLDAGDDEQFVCEDCETQFFIQVVEEGEDEDEDEEY
Ga0187892_1006097953300019458Bio-OozeMSAEISFCPMCAGKLDAGDDEQFTCEECETQFFIQVVAEGDDDEDEDEEF
Ga0210382_1054877123300021080Groundwater SedimentTEISFCPMCAGKLDAAENEQFVCEDCETSFFIQIAEGDEDDEDEEL
Ga0210408_1067815523300021178SoilMKTDISFCPLCAGKLDAGEDEQFVCEDCESSFFIQIVEEGEDDDEDEEA
Ga0187846_1038974523300021476BiofilmMSTEISFCPVCAGKLDAGDDEQFVCEDCETSFFIQVVEEGDEDEEEEDY
Ga0212128_1078003823300022563Thermal SpringsMRAEISFCPLCAGKLDSGEDEQFVCEDCESSFFIQVVEEGDEADEDEDE
Ga0222622_1142988123300022756Groundwater SedimentMSAEISFCPLCAGKLDSGEDEQFVCEDCESSFFIQVVDAGDE
Ga0209324_1068999323300025174SoilMSAEISFCPLCAGKLDSGEDEQFVCEDCEATFFIQVVDAGDEGEDEEDN
Ga0209172_10000767283300025310Hot Spring SedimentMSTDISFCPSCAGKLDAGDDDQFTCQDCEAEFLIQIVEEGADLDDEEDDEY
Ga0209640_1101193733300025324SoilMKTEISFCPLCAGKLEAGDEEQFTCEDCESKFFIQLVQ
Ga0207643_1057181633300025908Miscanthus RhizosphereMSVEISFCPLCAGKLDSGNNDKFVCDDCETRFLIQVVDEDDD
Ga0207665_1045372423300025939Corn, Switchgrass And Miscanthus RhizosphereMSTEISFCPLCAGKLDSGDDEQYVCEDCESQFFIQVVEEGDEDEDDEE
Ga0207674_1130033513300026116Corn RhizosphereACAGKLDAGEDEQYVCEDCESQFFIQLLEEGDEDEDDEE
Ga0209056_1002698623300026538SoilMSAEISFCPLCAGKLDAGDDEQFICEDCETQFFIQVVEEGDDEEEDEEF
Ga0209726_1020405713300027815GroundwaterMSVEISFCPICAGKLDGGEEEQYVCEDCEAQFFIQVVAEGEDDDEDEES
Ga0209465_1041447323300027874Tropical Forest SoilMSAEISFCPLCAGKLDSGDDEQYICEDCESQFFIQIVEE
Ga0209486_1050467723300027886Agricultural SoilMKTEISFCPTCAGKLDVAEDDQFQCEDCETKFYIQIAEEGEEEEED
Ga0209624_1074835323300027895Forest SoilMKTDISFCPLCAGKLDAGEDEQFVCEDCESSFFIQIVEAGEDDDEEDEA
Ga0307503_1085447523300028802SoilMSVEISFCPLCAGKLDSGNNDKFVCDDCETRFLIQVVEEDDD
Ga0310915_1074781113300031573SoilMSAEISFCPLCAGKLDAGDDEQYVCEDCESQFFIQVVEEGDEDEEDE
Ga0307469_1205520313300031720Hardwood Forest SoilGKLDAGEDEQFVCEDCESSFFIQIVEEGEDDDDEEDA
Ga0306920_10145092613300032261SoilMSAEISFCPLCAGKLDSGEDEQYVCEDCESAFFIQVVDEGDEDEEE
Ga0326726_1039281723300033433Peat SoilMKAEISFCPLCAGKLDAGEDEQFVCEDCESQFFIQLVEGEDDEDEE

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.