Basic Information | |
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Family ID | F095930 |
Family Type | Metagenome |
Number of Sequences | 105 |
Average Sequence Length | 113 residues |
Representative Sequence | VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS |
Number of Associated Samples | 79 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 37.14 % |
% of genes near scaffold ends (potentially truncated) | 40.95 % |
% of genes from short scaffolds (< 2000 bps) | 74.29 % |
Associated GOLD sequencing projects | 72 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.73 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (100.000 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (20.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (36.190 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (44.762 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 49.30% Coil/Unstructured: 50.70% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.73 |
Powered by PDBe Molstar |
SCOP family | SCOP domain | Representative PDB | TM-score |
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b.3.4.1: Transthyretin (synonym: prealbumin) | d1f86a_ | 1f86 | 0.67326 |
b.3.4.0: automated matches | d3qvaa1 | 3qva | 0.67029 |
b.3.4.0: automated matches | d2h6ua_ | 2h6u | 0.66542 |
b.183.1.1: Perfringolysin C-terminal-like | d1pfoa2 | 1pfo | 0.66429 |
b.3.4.0: automated matches | d4q14a_ | 4q14 | 0.66021 |
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Pfam ID | Name | % Frequency in 105 Family Scaffolds |
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PF02410 | RsfS | 40.00 |
PF00158 | Sigma54_activat | 34.29 |
PF01467 | CTP_transf_like | 5.71 |
PF02590 | SPOUT_MTase | 3.81 |
PF02954 | HTH_8 | 3.81 |
PF00149 | Metallophos | 1.90 |
PF02572 | CobA_CobO_BtuR | 0.95 |
PF03626 | COX4_pro | 0.95 |
PF02899 | Phage_int_SAM_1 | 0.95 |
PF03713 | DUF305 | 0.95 |
PF00753 | Lactamase_B | 0.95 |
PF01039 | Carboxyl_trans | 0.95 |
PF01016 | Ribosomal_L27 | 0.95 |
PF01926 | MMR_HSR1 | 0.95 |
COG ID | Name | Functional Category | % Frequency in 105 Family Scaffolds |
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COG0799 | Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits | Translation, ribosomal structure and biogenesis [J] | 40.00 |
COG1576 | 23S rRNA pseudoU1915 N3-methylase RlmH | Translation, ribosomal structure and biogenesis [J] | 3.81 |
COG0211 | Ribosomal protein L27 | Translation, ribosomal structure and biogenesis [J] | 0.95 |
COG0777 | Acetyl-CoA carboxylase beta subunit | Lipid transport and metabolism [I] | 0.95 |
COG0825 | Acetyl-CoA carboxylase alpha subunit | Lipid transport and metabolism [I] | 0.95 |
COG2109 | ATP:corrinoid adenosyltransferase | Coenzyme transport and metabolism [H] | 0.95 |
COG3125 | Heme/copper-type cytochrome/quinol oxidase, subunit 4 | Energy production and conversion [C] | 0.95 |
COG3544 | Uncharacterized conserved protein, DUF305 family | Function unknown [S] | 0.95 |
COG4799 | Acetyl-CoA carboxylase, carboxyltransferase component | Lipid transport and metabolism [I] | 0.95 |
COG4973 | Site-specific recombinase XerC | Replication, recombination and repair [L] | 0.95 |
COG4974 | Site-specific recombinase XerD | Replication, recombination and repair [L] | 0.95 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 100.00 % |
Unclassified | root | N/A | 0.00 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2088090014|GPIPI_17103348 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1394 | Open in IMG/M |
2228664022|INPgaii200_c1180332 | All Organisms → cellular organisms → Bacteria | 806 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_101988895 | All Organisms → cellular organisms → Bacteria | 1233 | Open in IMG/M |
3300000559|F14TC_107582467 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 501 | Open in IMG/M |
3300004114|Ga0062593_100000318 | All Organisms → cellular organisms → Bacteria | 14505 | Open in IMG/M |
3300004479|Ga0062595_100036370 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2096 | Open in IMG/M |
3300004479|Ga0062595_100203369 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1228 | Open in IMG/M |
3300004479|Ga0062595_102271654 | All Organisms → cellular organisms → Bacteria | 534 | Open in IMG/M |
3300004633|Ga0066395_10532359 | All Organisms → cellular organisms → Bacteria | 681 | Open in IMG/M |
3300005330|Ga0070690_100461176 | All Organisms → cellular organisms → Bacteria | 944 | Open in IMG/M |
3300005332|Ga0066388_100213886 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter | 2554 | Open in IMG/M |
3300005332|Ga0066388_102453009 | All Organisms → cellular organisms → Bacteria | 947 | Open in IMG/M |
3300005343|Ga0070687_100220519 | All Organisms → cellular organisms → Bacteria | 1161 | Open in IMG/M |
3300005356|Ga0070674_100280742 | All Organisms → cellular organisms → Bacteria | 1320 | Open in IMG/M |
3300005367|Ga0070667_102239454 | All Organisms → cellular organisms → Bacteria | 515 | Open in IMG/M |
3300005439|Ga0070711_100304814 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter | 1268 | Open in IMG/M |
3300005440|Ga0070705_100023101 | All Organisms → cellular organisms → Bacteria | 3334 | Open in IMG/M |
3300005466|Ga0070685_10770470 | All Organisms → cellular organisms → Bacteria | 707 | Open in IMG/M |
3300005468|Ga0070707_101592135 | All Organisms → cellular organisms → Bacteria | 620 | Open in IMG/M |
3300005545|Ga0070695_101227220 | All Organisms → cellular organisms → Bacteria | 617 | Open in IMG/M |
3300005548|Ga0070665_100005944 | All Organisms → cellular organisms → Bacteria | 12497 | Open in IMG/M |
3300005764|Ga0066903_100186897 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter | 3069 | Open in IMG/M |
3300005764|Ga0066903_103467501 | All Organisms → cellular organisms → Bacteria | 850 | Open in IMG/M |
3300005764|Ga0066903_104869905 | All Organisms → cellular organisms → Bacteria | 713 | Open in IMG/M |
3300005842|Ga0068858_100648499 | All Organisms → cellular organisms → Bacteria | 1026 | Open in IMG/M |
3300005842|Ga0068858_100669441 | All Organisms → cellular organisms → Bacteria | 1009 | Open in IMG/M |
3300006173|Ga0070716_100816862 | All Organisms → cellular organisms → Bacteria | 723 | Open in IMG/M |
3300006175|Ga0070712_100030427 | All Organisms → cellular organisms → Bacteria | 3627 | Open in IMG/M |
3300006854|Ga0075425_100001809 | All Organisms → cellular organisms → Bacteria | 21062 | Open in IMG/M |
3300006854|Ga0075425_100419722 | All Organisms → cellular organisms → Bacteria | 1541 | Open in IMG/M |
3300006854|Ga0075425_100442030 | All Organisms → cellular organisms → Bacteria | 1498 | Open in IMG/M |
3300006854|Ga0075425_100555395 | All Organisms → cellular organisms → Bacteria | 1321 | Open in IMG/M |
3300006854|Ga0075425_102420930 | All Organisms → cellular organisms → Bacteria | 582 | Open in IMG/M |
3300006871|Ga0075434_101085415 | All Organisms → cellular organisms → Bacteria | 814 | Open in IMG/M |
3300007076|Ga0075435_100679778 | All Organisms → cellular organisms → Bacteria | 894 | Open in IMG/M |
3300007076|Ga0075435_101246548 | All Organisms → cellular organisms → Bacteria | 651 | Open in IMG/M |
3300009162|Ga0075423_11450574 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 735 | Open in IMG/M |
3300009174|Ga0105241_11392980 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 671 | Open in IMG/M |
3300009177|Ga0105248_10053560 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 4527 | Open in IMG/M |
3300009545|Ga0105237_10148156 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2342 | Open in IMG/M |
3300009792|Ga0126374_10058310 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2002 | Open in IMG/M |
3300009792|Ga0126374_10111892 | All Organisms → cellular organisms → Bacteria | 1576 | Open in IMG/M |
3300009792|Ga0126374_10222253 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1212 | Open in IMG/M |
3300010043|Ga0126380_10585510 | All Organisms → cellular organisms → Bacteria | 875 | Open in IMG/M |
3300010046|Ga0126384_10118687 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1985 | Open in IMG/M |
3300010047|Ga0126382_10480722 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 993 | Open in IMG/M |
3300010048|Ga0126373_10071464 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes | 3136 | Open in IMG/M |
3300010358|Ga0126370_10288738 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1294 | Open in IMG/M |
3300010358|Ga0126370_10335167 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1216 | Open in IMG/M |
3300010358|Ga0126370_11321049 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 677 | Open in IMG/M |
3300010360|Ga0126372_10109094 | All Organisms → cellular organisms → Bacteria | 2105 | Open in IMG/M |
3300010360|Ga0126372_12722165 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 546 | Open in IMG/M |
3300010362|Ga0126377_12337888 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 610 | Open in IMG/M |
3300010366|Ga0126379_10031203 | All Organisms → cellular organisms → Bacteria | 4164 | Open in IMG/M |
3300010366|Ga0126379_11927643 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 694 | Open in IMG/M |
3300010398|Ga0126383_10453403 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1332 | Open in IMG/M |
3300012896|Ga0157303_10128936 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 652 | Open in IMG/M |
3300012948|Ga0126375_10084321 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1829 | Open in IMG/M |
3300012948|Ga0126375_11148652 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 643 | Open in IMG/M |
3300012971|Ga0126369_10629664 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1145 | Open in IMG/M |
3300012971|Ga0126369_10789361 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345 | 1031 | Open in IMG/M |
3300013297|Ga0157378_10004763 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 11892 | Open in IMG/M |
3300013297|Ga0157378_11204569 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 797 | Open in IMG/M |
3300014968|Ga0157379_10168033 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1980 | Open in IMG/M |
3300014969|Ga0157376_10000005 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 443695 | Open in IMG/M |
3300015371|Ga0132258_10017196 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 15605 | Open in IMG/M |
3300015371|Ga0132258_10204836 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 4788 | Open in IMG/M |
3300015371|Ga0132258_10637703 | All Organisms → cellular organisms → Bacteria | 2678 | Open in IMG/M |
3300015371|Ga0132258_13222183 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1125 | Open in IMG/M |
3300015372|Ga0132256_100498073 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1329 | Open in IMG/M |
3300015372|Ga0132256_103274995 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 545 | Open in IMG/M |
3300015373|Ga0132257_100541141 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1433 | Open in IMG/M |
3300015374|Ga0132255_102274458 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 827 | Open in IMG/M |
3300016341|Ga0182035_10072398 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 2431 | Open in IMG/M |
3300021560|Ga0126371_10824383 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1073 | Open in IMG/M |
3300024222|Ga0247691_1018240 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1109 | Open in IMG/M |
3300024232|Ga0247664_1102016 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 665 | Open in IMG/M |
3300024254|Ga0247661_1000420 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium | 7602 | Open in IMG/M |
3300024310|Ga0247681_1007766 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1411 | Open in IMG/M |
3300025899|Ga0207642_10432305 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 794 | Open in IMG/M |
3300025900|Ga0207710_10169294 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1067 | Open in IMG/M |
3300025937|Ga0207669_10939062 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 724 | Open in IMG/M |
3300025938|Ga0207704_10698797 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 839 | Open in IMG/M |
3300025941|Ga0207711_11764542 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 562 | Open in IMG/M |
3300026035|Ga0207703_10473654 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1173 | Open in IMG/M |
3300026088|Ga0207641_10102903 | All Organisms → cellular organisms → Bacteria | 2519 | Open in IMG/M |
3300026089|Ga0207648_10667183 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 962 | Open in IMG/M |
3300026095|Ga0207676_10526288 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1126 | Open in IMG/M |
3300027874|Ga0209465_10010270 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 4156 | Open in IMG/M |
3300031546|Ga0318538_10288470 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes | 884 | Open in IMG/M |
3300031561|Ga0318528_10085260 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1643 | Open in IMG/M |
3300031668|Ga0318542_10348316 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 762 | Open in IMG/M |
3300031679|Ga0318561_10288177 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 897 | Open in IMG/M |
3300031720|Ga0307469_10032561 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 3049 | Open in IMG/M |
3300031720|Ga0307469_10980289 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 788 | Open in IMG/M |
3300031798|Ga0318523_10374014 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 709 | Open in IMG/M |
3300031846|Ga0318512_10407574 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 683 | Open in IMG/M |
3300031860|Ga0318495_10165317 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 998 | Open in IMG/M |
3300031896|Ga0318551_10224015 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1046 | Open in IMG/M |
3300032068|Ga0318553_10271726 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 886 | Open in IMG/M |
3300032094|Ga0318540_10301921 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 772 | Open in IMG/M |
3300032174|Ga0307470_10007249 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 4429 | Open in IMG/M |
3300032180|Ga0307471_100049185 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 3462 | Open in IMG/M |
3300032205|Ga0307472_100081121 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2159 | Open in IMG/M |
3300032205|Ga0307472_100282774 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1322 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 20.00% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 13.33% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 8.57% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 6.67% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 5.71% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.71% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 5.71% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 4.76% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 3.81% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.86% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.86% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.86% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.86% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.86% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.90% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.90% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.90% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.90% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.95% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.95% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.95% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.95% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2088090014 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
2228664022 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000559 | Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
3300012896 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2 | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300024222 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32 | Environmental | Open in IMG/M |
3300024232 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05 | Environmental | Open in IMG/M |
3300024254 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02 | Environmental | Open in IMG/M |
3300024310 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22 | Environmental | Open in IMG/M |
3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027874 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes) | Environmental | Open in IMG/M |
3300031546 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23 | Environmental | Open in IMG/M |
3300031561 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26 | Environmental | Open in IMG/M |
3300031668 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23 | Environmental | Open in IMG/M |
3300031679 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031798 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19 | Environmental | Open in IMG/M |
3300031846 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19 | Environmental | Open in IMG/M |
3300031860 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25 | Environmental | Open in IMG/M |
3300031896 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19 | Environmental | Open in IMG/M |
3300032068 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21 | Environmental | Open in IMG/M |
3300032094 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25 | Environmental | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
GPIPI_00307460 | 2088090014 | Soil | VPPPGHSGSATVQITIVRNSPDDTQTRQIKIFLDGKNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS |
INPgaii200_11803322 | 2228664022 | Soil | VQITIVRNSPDDTQTRQIKIFLDGKNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS |
INPhiseqgaiiFebDRAFT_1019888953 | 3300000364 | Soil | VQITIVRNSPDDTQTRQIKIFLDGKNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
F14TC_1075824672 | 3300000559 | Soil | VSASEHPPATPARVTIFRNSPEDTQTRQIKIYLDQQNQGELMYGESMTLDVSAGTHTIRVDNTWNRKELAIEVQPGDELQFVTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSGPPHR* |
Ga0062593_1000003182 | 3300004114 | Soil | VADPENSKPGTARVTVFRDSPEDTQTRQIKIYLDGENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPEHS* |
Ga0062595_1000363703 | 3300004479 | Soil | VLAVADPENSKPGTARVTVFRNSPEDTQTRQIKIYLDSENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPEHS |
Ga0062595_1002033692 | 3300004479 | Soil | VIVRNSSDDTQTRQIKIFLDGENQGELMFGDSMTLEVSSGAHTIRVDNTWNRKDLALEIHAGQNLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS* |
Ga0062595_1022716542 | 3300004479 | Soil | VADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFMTKSSAGKFVWFLMGFLGAGPMR |
Ga0066395_105323591 | 3300004633 | Tropical Forest Soil | DDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP* |
Ga0070690_1004611762 | 3300005330 | Switchgrass Rhizosphere | VADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFMTKSSAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR* |
Ga0066388_1002138862 | 3300005332 | Tropical Forest Soil | VSASENPSPATARVTIFRDSPEDTQTRQIKVYLDGQQQGELMYGDAMTLDLMPGVHVLRVDNTWNRKDLSIAVRPGEDLQFVTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPRS* |
Ga0066388_1024530091 | 3300005332 | Tropical Forest Soil | ARFGRSLLSGCAVPAPAHSGSAPGRVTVFRNSPADTQTRQIKVYLDGQNQGELMFGDSMTLDAAPGAHVLRVDNTWNRKDLAIEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA* |
Ga0070687_1002205192 | 3300005343 | Switchgrass Rhizosphere | VADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFLTKSSAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR* |
Ga0070674_1002807423 | 3300005356 | Miscanthus Rhizosphere | VADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFLTKSPAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR* |
Ga0070667_1022394542 | 3300005367 | Switchgrass Rhizosphere | VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0070711_1003048142 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | VQITIVRNSPADTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGQRLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0070705_1000231014 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0070685_107704701 | 3300005466 | Switchgrass Rhizosphere | FRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGEHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS* |
Ga0070707_1015921351 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSR |
Ga0070695_1012272202 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | HSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0070665_1000059444 | 3300005548 | Switchgrass Rhizosphere | VAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGEHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS* |
Ga0066903_1001868974 | 3300005764 | Tropical Forest Soil | MPSFRVIAAACVLPAIIPERAAVSASENSSPATARVTIFRDSPEDTQTRQIKIYLDGQQQGELMYGDSMTLDVVPGAHVLRVDNTWNRKDLAIAVRPGEDFQFVTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLRS* |
Ga0066903_1034675011 | 3300005764 | Tropical Forest Soil | VAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP* |
Ga0066903_1048699052 | 3300005764 | Tropical Forest Soil | VPAPAHSGSAPGRVTVFRNSPADTQTRQIKVYLDGQNQGELMFGDSMTLDAAPGAHVLRVDNTWNRKDLAIEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA* |
Ga0068858_1006484992 | 3300005842 | Switchgrass Rhizosphere | VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKELIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0068858_1006694412 | 3300005842 | Switchgrass Rhizosphere | MSTTLPSPKSSDSTSVGTQITIVRNSSEDTQTRQIIVYLDGENRGELMYGDSMTLDVAPGAHVMRVDNTWNRKDLRIVVQPGEEHRFVTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPLQS* |
Ga0070716_1008168621 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | VQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0070712_1000304275 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | VPPPGHSGSATVQITIVRNSPADTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGQRLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0075425_10000180913 | 3300006854 | Populus Rhizosphere | VSLPEHPAAHITVVRNSPDDTQTRQIKIFLDGENHGELMFGDSATLGVNAGSHTIRVDNTWNRKEISFQIRSGEHLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPVLGIPS* |
Ga0075425_1004197221 | 3300006854 | Populus Rhizosphere | MPPPEHSGSTTAQITIVRNSPEDTQTRQIKIFLDGESQGELMFGDSMTLDVGAGAHTLRVDNTWNRKDLAIEISAGENLRFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0075425_1004420303 | 3300006854 | Populus Rhizosphere | MTASAVPHRDHFGSATAQIVIVRNSSDDTQTRQIKIFLDGENQGELMFGDSMTLEVSSGAHTIRVDNTWNRKDLALEIHAGQNLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS* |
Ga0075425_1005553952 | 3300006854 | Populus Rhizosphere | VPPPENSGSATARITIVRNSPEDTQTRQIKIFLDGENQGELMFGDSMTLNVSAGTHAIRVDNTWNRKELTLEIHAGGSLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0075425_1024209301 | 3300006854 | Populus Rhizosphere | VSDLKNSGLGAGRVTIFRNSPDDTQTRQIKVYLDDRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSLEPLPSRPPEP* |
Ga0075434_1010854152 | 3300006871 | Populus Rhizosphere | VSDLKNSGLGAGRVTIFRNSPDDTQTRQIKVYLDDRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSLEP |
Ga0075435_1006797782 | 3300007076 | Populus Rhizosphere | VADSENFKPGTAHITVFRNSPEDTQTRQIKIYLDRQNQGELMYGDSMTLDVAAGTHVLGVDNTWNRKELAIEVQHGDELQFITRSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPQR* |
Ga0075435_1012465481 | 3300007076 | Populus Rhizosphere | RLRRSSAPARFRRSLLIANHVAPSDHPVPVTAQITIVRNSPADTQTRQIKIFLDGQSQGELMYGDSTTLDVSAGTHTIRVDNTWNGKEITIQIRAGEHLQFLTRSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0075423_114505742 | 3300009162 | Populus Rhizosphere | VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIQSGEHLYFLAKSSAGKFAWFLLGFLGAGPMQVSI |
Ga0105241_113929801 | 3300009174 | Corn Rhizosphere | VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS* |
Ga0105248_100535601 | 3300009177 | Switchgrass Rhizosphere | VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKELIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPS |
Ga0105237_101481562 | 3300009545 | Corn Rhizosphere | VAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRADEHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS* |
Ga0126374_100583103 | 3300009792 | Tropical Forest Soil | VAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHILRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP* |
Ga0126374_101118922 | 3300009792 | Tropical Forest Soil | VSDPKNSGFAAGRVTIFRNSPDDTQTRQIKVYLDGRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLALEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPIHVSIEPLPSRPPQP* |
Ga0126374_102222532 | 3300009792 | Tropical Forest Soil | VPITIVRNSPDDTQTRQIKIFLDGESQGELMFGDSMTLEVSVGAHTIGVDNTWKRKDLAIEIHAGEHLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0126380_105855102 | 3300010043 | Tropical Forest Soil | VSELQDSGLAAGRVTIFRNSPEDTQTRQIKVYLDGRNRGELMFGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP* |
Ga0126384_101186873 | 3300010046 | Tropical Forest Soil | VSDLQDSGLARGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLPPGAHVLRVDNTWNYKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP* |
Ga0126382_104807221 | 3300010047 | Tropical Forest Soil | GRSLLSSTAVSDPKSSGFAAGRVTILRNSPDDTQTRQIKVYLDGRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLALEVRPGDDLQFLTKSSAGKLVWFLLGFLGAGPMHVSIEPLPSRPPQP* |
Ga0126373_100714642 | 3300010048 | Tropical Forest Soil | MPSEKPKDPTAGGQVTIVRNSSDDTQTRQIVIYLDRERKGELMFGDSMTFELTPGAHTLRVDNTWNRQDLSFELRAGDHLQFQTKSTASKFSWFLLGFLGAGPMHVFIEPLPSRT* |
Ga0126370_102887382 | 3300010358 | Tropical Forest Soil | VFRNSPADTQTRQIKVYLDGQNQGELMFGDSMTLDAAPGAHVLRVDNTWNRKDLAIEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA* |
Ga0126370_103351673 | 3300010358 | Tropical Forest Soil | VSDLQDSGLARGRVTIFRNSPEDTQTRQIKVYLDGRNRGELMYGDSMTLDLPPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP* |
Ga0126370_113210492 | 3300010358 | Tropical Forest Soil | FMTAETAEQVSETAQITIVRDSSEDTQTRQIVVYLDGQNQGELMFGDSITLDLVPGAHTLRVDNTWNRQDLKLDLRAGEHLQFRTRSSATKFSWFLLGFLGAGPMRVSIEPLPSRA* |
Ga0126372_101090941 | 3300010360 | Tropical Forest Soil | PADTQTRQIKVYLDGRNQGELMYGDSMTLDAAPGAHVLRVDNTWNRKDLAIEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA* |
Ga0126372_127221651 | 3300010360 | Tropical Forest Soil | MTAETAEQVSETAQITIVRDSSEDTQTRQIVVYLDGQNQGELMFGDSITLDLVPGAHTLRVDNTWNRQDLKLDLRAGEHLQFRTRSSATKFSWFLLGFLGAGPMRVSIEPLPSRA* |
Ga0126377_123378881 | 3300010362 | Tropical Forest Soil | SPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLPPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP* |
Ga0126379_100312033 | 3300010366 | Tropical Forest Soil | VSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLPPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP* |
Ga0126379_119276432 | 3300010366 | Tropical Forest Soil | VSFAENTSSANAQITVVRNSADDTQTRQIKVFLDGENQGELMFGDSMTLDVVAGKHTIRVDNTWNRQTLTTEVHSGEHLEFVTKSTAGKFVWFLLGFLGAGPMQVSIEPLPSRSQRQ* |
Ga0126383_104534031 | 3300010398 | Tropical Forest Soil | GRSLLSGTAVSELQDSGLAAGRVTIFRNSPEDTQTRQIKVYLDGRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDDLEFLTKSSAGKLVWFLLGFLGAGPMHVSIEPLPSRPPQP* |
Ga0157303_101289361 | 3300012896 | Soil | VADPENSKPGTARVTVFRDSPEDTQTRQIKIYLDGENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLP |
Ga0126375_100843213 | 3300012948 | Tropical Forest Soil | VSDPKNSGFAAGRVTIFRNSPDDTQTRQIKVYLDGRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLALEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA* |
Ga0126375_111486522 | 3300012948 | Tropical Forest Soil | VAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIRLDVSPGTHVLRVDNTWNRKDLKIEIRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHSP* |
Ga0126369_106296641 | 3300012971 | Tropical Forest Soil | PAAVARFRRSFLSGVSVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP* |
Ga0126369_107893611 | 3300012971 | Tropical Forest Soil | MSSAERLETTARITILRNATDDTQTRQIKVYLDGQNRGELMYGDSLALDVPPGAHVLGVDNTWNRKDLALEVHPGRDLRFLTKSSAGRFVWFLLGF |
Ga0157378_100047637 | 3300013297 | Miscanthus Rhizosphere | VADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDLQAGAHTIRADNTWNRRDLQIEVRAGEHLQFLTKSSAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR* |
Ga0157378_112045693 | 3300013297 | Miscanthus Rhizosphere | VLAVADPENSKPGTARVTVFRNSPEDTQTRQIKIYLDSENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGA |
Ga0157379_101680333 | 3300014968 | Switchgrass Rhizosphere | VGTQITIVRNSSEDTQTRQIIVYLDGENRGELMYGDSMTLDVAPGAHVMRVDNTWNRKDLRIVVQPGEEHRFVTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPLQS* |
Ga0157376_1000000554 | 3300014969 | Miscanthus Rhizosphere | VAPSDHPVPVTAQITIVRNSPADTQTRQIKIFLDGQSQGELMYGDSTTLDVSAGTHTIRVDNTWNGKEITIQIRAGEHLQFLTRSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0132258_100171966 | 3300015371 | Arabidopsis Rhizosphere | VPLPEHPAAHITVVRNSPDDTQTRQIKLFLDGKNHGELMFGDSATLAVNAGSHTICVDNTWNRKEISIEIRSGEHLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPVLGIPS* |
Ga0132258_102048368 | 3300015371 | Arabidopsis Rhizosphere | VLAVADPENSKPGTARVTVFRNSPEDTQTRQIKIYLDSENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRREPS |
Ga0132258_106377033 | 3300015371 | Arabidopsis Rhizosphere | VLPATIPDPSAVPPPGHSGSATVQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWKRKELAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0132258_132221831 | 3300015371 | Arabidopsis Rhizosphere | SPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0132256_1004980732 | 3300015372 | Arabidopsis Rhizosphere | VPTTEHSASPTAQITIVRDSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIQAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0132256_1032749952 | 3300015372 | Arabidopsis Rhizosphere | VAPSDHPVPVTAQITIVRNSPADTQTRQIKIFLDGQSQGELMYGDSTTLDVSAGTHTIRVDNTWNGKEITIQIRAGEHLQFLTRSSAGKFAWFLLGFLGA |
Ga0132257_1005411412 | 3300015373 | Arabidopsis Rhizosphere | VPTTEHSGSPTAQITIVRDSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIQAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0132255_1022744582 | 3300015374 | Arabidopsis Rhizosphere | PSDHPVPVTAQITLVRNSPADTQTRQIKIFLDGQSQGELMYGDSTTLDVSAGTHTIRVDNTWNGKEITIQIRAGEHLQFLTRSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS* |
Ga0182035_100723985 | 3300016341 | Soil | VSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSI |
Ga0126371_108243831 | 3300021560 | Tropical Forest Soil | AGRGGLERPAAVARFRRSFLSGVSVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP |
Ga0247691_10182403 | 3300024222 | Soil | VPLPEHPAAHITVVRNSPDDTQTRQIKLFLDGKNHGELMFGDSATLAVNAGSHTICVDNTWNRKEISIEIRSGEHLRFLTKSSAGKFAWFLLG |
Ga0247664_11020162 | 3300024232 | Soil | VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS |
Ga0247661_10004209 | 3300024254 | Soil | VPLPEHRAAHITVVRNSPDDTQTRQIKLFLDGKNHGELMFGDSATLAVNAGSHTICVDNTWNRKEISIEIRSGEHLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPVLGIPS |
Ga0247681_10077661 | 3300024310 | Soil | VPLPEHPAAHITVVRNSPDDTQTRQIKLFLDGKNHGELMFGDSATLAVNAGSHTICVDNTWNRKEISIEIRSGEHLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPVLGIPS |
Ga0207642_104323052 | 3300025899 | Miscanthus Rhizosphere | VADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDLQAGAHTIRADNTWNRRDLQIEVRAGEHLQFMTKSSAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR |
Ga0207710_101692943 | 3300025900 | Switchgrass Rhizosphere | VAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGEHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS |
Ga0207669_109390621 | 3300025937 | Miscanthus Rhizosphere | AAVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFLTKSPAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR |
Ga0207704_106987971 | 3300025938 | Miscanthus Rhizosphere | VAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGEHLQFLTKSSAGKFVWFLLGFLGAGPMRV |
Ga0207711_117645421 | 3300025941 | Switchgrass Rhizosphere | VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKELIIEIHAGERLQFLTKSSAGKFAWFL |
Ga0207703_104736543 | 3300026035 | Switchgrass Rhizosphere | VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKELIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS |
Ga0207641_101029034 | 3300026088 | Switchgrass Rhizosphere | VAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGVHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS |
Ga0207648_106671832 | 3300026089 | Miscanthus Rhizosphere | VADPENSKPGTARVTVFRNSPEDTQTRQIKIYLDSENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPEHS |
Ga0207676_105262881 | 3300026095 | Switchgrass Rhizosphere | RSLLTAVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS |
Ga0209465_100102707 | 3300027874 | Tropical Forest Soil | RPAAVARFRRSFLSGVSVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP |
Ga0318538_102884702 | 3300031546 | Soil | VSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP |
Ga0318528_100852602 | 3300031561 | Soil | VTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP |
Ga0318542_103483161 | 3300031668 | Soil | VSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMH |
Ga0318561_102881772 | 3300031679 | Soil | ATYRAMKFPTSRTPSFPAIAGACALRAITPERHRVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP |
Ga0307469_100325613 | 3300031720 | Hardwood Forest Soil | VADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLRIEVRAGEHLQFMTKSSAGKFVWFLLGFLGAGPIRVSIEPLPSRSEHR |
Ga0307469_109802892 | 3300031720 | Hardwood Forest Soil | VQITIVRNSPDDTQTRQIKIFLDGQNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS |
Ga0318523_103740141 | 3300031798 | Soil | SLLSGTAVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP |
Ga0318512_104075741 | 3300031846 | Soil | RSLLSGTAVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP |
Ga0318495_101653171 | 3300031860 | Soil | TAVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP |
Ga0318551_102240153 | 3300031896 | Soil | VSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPP |
Ga0318553_102717262 | 3300032068 | Soil | DTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP |
Ga0318540_103019212 | 3300032094 | Soil | NSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP |
Ga0307470_100072495 | 3300032174 | Hardwood Forest Soil | VQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS |
Ga0307471_1000491854 | 3300032180 | Hardwood Forest Soil | VQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS |
Ga0307472_1000811212 | 3300032205 | Hardwood Forest Soil | VPPPGHSGSATVQITIVRNSPDDTQTRQIKIFLDGQNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS |
Ga0307472_1002827741 | 3300032205 | Hardwood Forest Soil | VPTTEHSGSPTAQITIVRDSPDDTQTRQIKVFLDGENQGDLMFGDFMTLDVNVGSHTIRVDNTWNHKDLIIEIHAGERLQFLTKSSAGKFAWFL |
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