Metagenome / Metatranscriptome Family F095927

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095927
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	73 residues
Representative Sequence	FNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLIDRAVGYSPEWEDRWKKVVEKHLKARK
Number of Associated Samples	91
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.05 %
% of genes from short scaffolds (< 2000 bps)	96.19 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.048 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (8.571 % of family members)
Environment Ontology (ENVO)	Unclassified (39.048 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.381 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.89% β-sheet: 11.11% Coil/Unstructured: 60.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13505	OMP_b-brl	50.48
PF02367	TsaE	4.76
PF01256	Carb_kinase	1.90
PF00005	ABC_tran	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0802	tRNA A37 threonylcarbamoyladenosine biosynthesis protein TsaE	Translation, ribosomal structure and biogenesis [J]	4.76
COG0063	NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate dehydratase domain	Nucleotide transport and metabolism [F]	1.90
COG0351	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	Coenzyme transport and metabolism [H]	1.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	87.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.95 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	87.62 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	87.62 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	87.62 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	87.62 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	87.62 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Unclassified	root	N/A	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003503\|JGI26141J51220_1013891	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300003504\|JGI26138J51218_108289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300004114\|Ga0062593_101472687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300005293\|Ga0065715_10854409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300005340\|Ga0070689_100588040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300005344\|Ga0070661_100381354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1111	Open in IMG/M
3300005344\|Ga0070661_101107605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300005347\|Ga0070668_100451286	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300005347\|Ga0070668_100565055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300005356\|Ga0070674_100807896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300005445\|Ga0070708_101673756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300005457\|Ga0070662_100069643	All Organisms → cellular organisms → Bacteria	2590	Open in IMG/M
3300005468\|Ga0070707_101304507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300005468\|Ga0070707_101759003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300005535\|Ga0070684_101003819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300005536\|Ga0070697_100882069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300005545\|Ga0070695_100216307	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300005546\|Ga0070696_100435661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300005548\|Ga0070665_101563528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300005549\|Ga0070704_100136257	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300005564\|Ga0070664_100068835	All Organisms → cellular organisms → Bacteria	3027	Open in IMG/M
3300005840\|Ga0068870_10999820	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005842\|Ga0068858_101293122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300005844\|Ga0068862_100429623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1241	Open in IMG/M
3300006173\|Ga0070716_100928991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300006573\|Ga0074055_11153270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300006953\|Ga0074063_13797270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300006954\|Ga0079219_10132420	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300007004\|Ga0079218_11029676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300009012\|Ga0066710_102640715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300009157\|Ga0105092_10166844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300009176\|Ga0105242_12976838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300009177\|Ga0105248_12116063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300010043\|Ga0126380_10805857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300010154\|Ga0127503_10581408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300010358\|Ga0126370_11433597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300010362\|Ga0126377_13533855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300010366\|Ga0126379_12743483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300012360\|Ga0137375_10299563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1455	Open in IMG/M
3300012360\|Ga0137375_10769354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300012910\|Ga0157308_10124371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300012958\|Ga0164299_10769945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012971\|Ga0126369_10855465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300012971\|Ga0126369_12350574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300012976\|Ga0134076_10637984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	501	Open in IMG/M
3300012986\|Ga0164304_10326949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300012989\|Ga0164305_11657528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300013296\|Ga0157374_10988415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300013296\|Ga0157374_11860532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300013308\|Ga0157375_10680435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1183	Open in IMG/M
3300013308\|Ga0157375_13060683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300013503\|Ga0120127_10088251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300013770\|Ga0120123_1090450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300014882\|Ga0180069_1165838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300015245\|Ga0137409_11496865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300015256\|Ga0180073_1127830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300015371\|Ga0132258_12712574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1236	Open in IMG/M
3300015371\|Ga0132258_13183180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1133	Open in IMG/M
3300015372\|Ga0132256_103632254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300015374\|Ga0132255_102126070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300015374\|Ga0132255_102993307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300015374\|Ga0132255_103983086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300017974\|Ga0187777_10543617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300017974\|Ga0187777_11401408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300018060\|Ga0187765_10864032	Not Available	609	Open in IMG/M
3300018079\|Ga0184627_10320145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300018422\|Ga0190265_10615969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1205	Open in IMG/M
3300021090\|Ga0210377_10772264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300025324\|Ga0209640_10478661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300025885\|Ga0207653_10375960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300025908\|Ga0207643_10690163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300025918\|Ga0207662_10344089	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300025920\|Ga0207649_10349561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1094	Open in IMG/M
3300025920\|Ga0207649_11317579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300025933\|Ga0207706_10632510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300025936\|Ga0207670_10523512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300025972\|Ga0207668_11436734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300025986\|Ga0207658_11494515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300025986\|Ga0207658_12087504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300026035\|Ga0207703_10622968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022	Open in IMG/M
3300026535\|Ga0256867_10095564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300027682\|Ga0209971_1004736	All Organisms → cellular organisms → Bacteria	3230	Open in IMG/M
3300027695\|Ga0209966_1111115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300027886\|Ga0209486_10613452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300028379\|Ga0268266_10127145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2276	Open in IMG/M
3300028379\|Ga0268266_11174831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300028792\|Ga0307504_10074178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029	Open in IMG/M
3300031170\|Ga0307498_10205216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300031543\|Ga0318516_10312269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300031546\|Ga0318538_10800356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300031834\|Ga0315290_10453932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1121	Open in IMG/M
3300031890\|Ga0306925_11698990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300031965\|Ga0326597_11220585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300032017\|Ga0310899_10445956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300032055\|Ga0318575_10591804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300032090\|Ga0318518_10314760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300032180\|Ga0307471_101054536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300032205\|Ga0307472_100256540	All Organisms → cellular organisms → Bacteria → Proteobacteria	1375	Open in IMG/M
3300032783\|Ga0335079_11583727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300033414\|Ga0316619_11306260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300033550\|Ga0247829_11291790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300033805\|Ga0314864_0126193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300034115\|Ga0364945_0247706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300034178\|Ga0364934_0137301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300034820\|Ga0373959_0060427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.86%
Host-Associated	Host-Associated	37.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.19%
Plants	Host-Associated → Plants	37.14%
Aquatic	Environmental → Aquatic	6.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.29%
Freshwater	Environmental → Aquatic → Freshwater	3.81%
Sediment	Environmental → Aquatic → Sediment	2.86%
Floodplain	Environmental → Terrestrial → Floodplain	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.24%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.14%
Loam	Environmental → Terrestrial → Soil → Loam	13.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.86%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.90%
Lake	Environmental → Aquatic → Freshwater → Lake	0.95%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.90%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.95%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.95%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.86%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.95%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.95%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.95%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.95%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003503	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM	Host-Associated	Open in IMG/M
3300003504	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26141J51220_10138912	3300003503	Arabidopsis Thaliana Rhizosphere	LPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEDRWKRVVEKHLKKK*
JGI26138J51218_1082891	3300003504	Arabidopsis Thaliana Rhizosphere	RKRVAPFMKRYNISLPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEDRWKRVVEKHLKKK*
Ga0062593_1014726872	3300004114	Soil	VYFAAPEDAGPLTAMGIPSTFILGPDRTLVDRAVGYSPEWEDRWKKVVEKHLKAAHK*
Ga0065715_108544091	3300005293	Miscanthus Rhizosphere	SDRNFVVVAVNVDADRKRVPAFMKQFNISVPVYFAAPEDAGPLTASGIPSTFLLSAERTLLDRQVGYAPSVEDRWKKILEKHLRAKK*
Ga0070689_1005880402	3300005340	Switchgrass Rhizosphere	EPFLKRFNISLPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEERWKKVVEKHLKSKK*
Ga0070661_1003813543	3300005344	Corn Rhizosphere	KQFNISVPVYFAAPEDAGPLTASGIPSTFLLSAERTLLDRQVGYAPSVEDRWKKILEKHLRAKK*
Ga0070661_1011076052	3300005344	Corn Rhizosphere	ADRKRVDPFVKQFNISLPVYYASPEDAGPLTAMGIPSTFILGPDRTLMDRFVGYHPDVEERWKKLLEKTLKARK*
Ga0070668_1004512861	3300005347	Switchgrass Rhizosphere	NISLPVYYASPEDAGPLTAMGIPSTFILGPDRTLMDRFVGYHPDVEDRWKKLLEKTLKARK*
Ga0070668_1005650552	3300005347	Switchgrass Rhizosphere	NISLPVYYASPEDAGPLTAMGIPSTFILGPDRTLMDRFVGYHPDVEERWKKLLEKTLKARK*
Ga0070674_1008078962	3300005356	Miscanthus Rhizosphere	SVPVYFAAPEDAGPLTASGIPSTFLLSAERTLLDRQVGYAPSVEDRWKKILEKHLRAKK*
Ga0070708_1016737562	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LPIYYASPEDAGQMTALGIPSTFVLGPDRTLLDNQVGFSPQVEERWKQIIEKHLKARKPSR*
Ga0070662_1000696431	3300005457	Corn Rhizosphere	SDRNFVVVSVNVDADRKRVSPFMKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLVDRAVGYSPEWEDRWKKVVEKHLKSAHK*
Ga0070707_1013045072	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	RMYDNYSDRNFVVVAVNVDADRKRVPAFMKRFNISVPVYFAAPEDAGPLTASGIPSTFLLSAERTLLDRQVGYAPSVEDRWKKILEKHLRAKK*
Ga0070707_1017590031	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	FVVLAVNVDADRNRIDPFMKRNNISLPVYYASPEDAAQMTAAGIPSTFIIGPDRALLDQMVGYSAQAEERWKQVIEKRLKTRKTR*
Ga0070684_1010038191	3300005535	Corn Rhizosphere	RVPAFMKQFNISVPVYFAAPEDAGPLTASGIPSTFLLSAERTLLDRQVGYAPRVEDRWKKILEKHLRAKK*
Ga0070697_1008820692	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VVQRMYDTYSDRNFVVVAINVDADRKRVSPFLKQFNISLPVYYASPEDAGPLTAMGIPSTFILGPDRTLIDRAVGYAPEWEERWKKVVEKHLKPRR*
Ga0070695_1002163071	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	AVNVDADRKRVEPFLKRFNISLPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEERWKKVVEKHLKSKK*
Ga0070696_1004356612	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LAVNVDADRNRIQPFMKRYNISLPIYYASPEDAGQMTAAGIPSTFIIGTDRTMIDHMVGFSEKAEDRWKQIIEKRLKPARKSR*
Ga0070665_1015635281	3300005548	Switchgrass Rhizosphere	ADRKRVSPFVKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLIDRAVGYSPEWEDRWKKVVEKHLKARK*
Ga0070704_1001362571	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ISLPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEERWKKVVEKHLKSRK
Ga0070664_1000688355	3300005564	Corn Rhizosphere	FVKQFNISLPVYYASPEDAGPLTAMGIPSTFILGPDRTLMDRFVGYHPDVEDRWKKLLEKTLKARK*
Ga0068870_109998202	3300005840	Miscanthus Rhizosphere	DPFVKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLIDRAVGYSPEWEDRWKKVVEKHLKTRKQ*
Ga0068858_1012931222	3300005842	Switchgrass Rhizosphere	DRNFVVVSVNVDADRKRVDPFVKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLIDRAVGYSPEWEDRWKKVVEKHLKTHKQ*
Ga0068862_1004296231	3300005844	Switchgrass Rhizosphere	TYSDRNFVVVSVNVDADRKRVSPFMKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLVDRAVGYSPEWEDRWKKVVEKHLKSAHK*
Ga0070716_1009289912	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PFMKRYNISLPIYYASPEDAGQMTAEGIPSTFIIGADRTMLDHVVGFSEKAEDRWKQIIEKRLKPARKSR*
Ga0074055_111532701	3300006573	Soil	KMYDAYSDRNFVVVSVNVDADRRRVASFLKQFNISLPVYYAAPEDAGPLTAGGIPSTFILGPDRALVDRAVGYSPQWEERWKKVVEKYLKPRK*
Ga0074063_137972701	3300006953	Soil	LKQFNISLPVYYAAPEDAGPLTAGGIPSTFILGPDRALVDRAVGYSPQWEERWKKVVEKYLKPRK*
Ga0079219_101324201	3300006954	Agricultural Soil	FNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLIDRAVGYSPEWEDRWKKVVEKHLKARK*
Ga0079218_110296761	3300007004	Agricultural Soil	VLPFLKKHNISLPVYSAAPEDVAQMTAMGIPSTFILGPDRTLIDMAVGFSPEKSATGELLVEERWRKVVEKHLKGRK*
Ga0066710_1026407152	3300009012	Grasslands Soil	SLPVYYAAPEDAGQMTSMGIPSTFIIGPDRTLLNRNVGYSPEIEEKWTKIIEKRLKARKG
Ga0105092_101668441	3300009157	Freshwater Sediment	PIVQRLYDRYSDRNFVVIAINVDADRKRVAPYLKQHNISLPVYSAAPEDAAQMTAMGIPSTFIIGPDRTLLDMAVGYSPDVEERWKKVIEKHLKARK*
Ga0105242_129768381	3300009176	Miscanthus Rhizosphere	PFVKQFNISLPVYYASPEDAGPLTAMGIPSTFILGPDRTLMDRFVGYHPDVEERWKKLLEKTLKARK*
Ga0105248_121160632	3300009177	Switchgrass Rhizosphere	RRLRRTHRIQRVEPFVKQFNISLPVYYASPEDAGPLTAMGIPSTFILGPDRTLMDRFVGYHPDVEERWKKLLEKTLKARK*
Ga0126380_108058571	3300010043	Tropical Forest Soil	PIVQKMYDTYSDRNFVVVSVNVDADRRRVAPFLKKFNISLPVYYAAPEDAGPLTATGIPSTFILGPDRTLVDRAVGYAPEWEERWKKVVEKYSKTRN*
Ga0127503_105814083	3300010154	Soil	ADRRRVAPFLKQFNISLPVYYASPEDAGPLTATGIPSTFILGPDRALIDRAVGYSPEWEERWKKVVDKYLKSRK*
Ga0126370_114335971	3300010358	Tropical Forest Soil	VNVDADRNKIEPFKKRYNISLPVYFASPEDAGQMTAMGIPSTFILGPDRSLIDRAVGYSAQVEERWKQLIEKKLKPAKKSH*
Ga0126377_135338552	3300010362	Tropical Forest Soil	LKKFNISLPVYFAAPEDAGPLTATGIPSTFILGPDRTLVDRAVGYAPEWEERWKKVVEKYSKARK*
Ga0126379_127434831	3300010366	Tropical Forest Soil	NFVVVSVNVDADRRRVAPFLKQFNISLPVYFAAPEDAGPLTATGIPSTFILGPDRALVDRAVGYSPEWEERWKKVVERYLKSRK*
Ga0137375_102995631	3300012360	Vadose Zone Soil	RKRVEPFMKRYNISLPIYSAAPEDVAQMTAMGIPSTFILGPDRALIDMAVGFSPDVEERWKKVIEKHLKARK*
Ga0137375_107693542	3300012360	Vadose Zone Soil	KRNNISLPVYYASPEDAGQMTAAGIPSTFIIGPDRTLLDHMVGYSAQAEERWKQVIEKRLKARKTR*
Ga0157308_101243711	3300012910	Soil	PFMKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTIVDRAVGYSPEWEDRWKKVVEKHLKAAHK*
Ga0164299_107699451	3300012958	Soil	PFVKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLIDRAVGYSPEWEDRWKKVVEKHLKTRKQ*
Ga0126369_108554651	3300012971	Tropical Forest Soil	PFLKQFNISLPVYYAAPEDAGPLTATGIPSTFILGPDRALIDRAVGYSPEWEERWKKVVERYLKSRK*
Ga0126369_123505741	3300012971	Tropical Forest Soil	QKMYDTYSDRNFVVVSVNVDADRKRVAPFLKKFNISLPVYFAAPEDAGPLTATGIPSTFILGPDRTLVDRAVGYAPEWEERWKKVVEKYSKARK*
Ga0134076_106379841	3300012976	Grasslands Soil	NISLPIYSAAPEDVAQMTAMGIPSTFILGPDRALIDMAIGFSPDVEERWKKVIEKHLKARK*
Ga0164304_103269492	3300012986	Soil	VLAVNVDADRKRVEPFLKRFNISLPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEERWKKVVEKHLKSKK*
Ga0164305_116575282	3300012989	Soil	MELPVVQRMYDSYSDRNFVVVAVNVDADRKRVPAFMKQFNISVPVYFAAPEDAGPLTASGIPSTFLLSAERTLLDRQVGYAPSVEDRWKKILEKHLQAKK*
Ga0157374_109884152	3300013296	Miscanthus Rhizosphere	MELPVVQRMYDNYSDRNFVVVAVNVDADRKRVPAFMKQFNISVPVYFAAPEDAGPLTASGIPSTFLLSAERTLLDRQVGYAPSVEDRWKKILEKHLRAKK*
Ga0157374_118605321	3300013296	Miscanthus Rhizosphere	NISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLIDRAVGYSPEWEDRWKKVVEKHLKARK*
Ga0157375_106804351	3300013308	Miscanthus Rhizosphere	PFVKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLIDRAVGYSPEWEDRWKKVVEKHLKTHKQ*
Ga0157375_130606831	3300013308	Miscanthus Rhizosphere	YSDRNFVVVSVNVDADRRRVASFLKQFNISLPVYYAAPEDAGPLTAGGIPSTFILGPDRALVDRAVGYSPQWEERWKKVVEKYLKPRK*
Ga0120127_100882511	3300013503	Permafrost	VEPFLKRFNISLPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEERWKKVVEKHLKSRK*
Ga0120123_10904501	3300013770	Permafrost	NISVPVYYASPEDAGPLTARGIPSTFLLATDRTVLDSQVGYAPNVEDRWKKILEKHLRPRR*
Ga0180069_11658382	3300014882	Soil	FLKRFNISLPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEERWKRLVEKHLRARK*
Ga0137409_114968652	3300015245	Vadose Zone Soil	FMKRYNISLPIYYASPEDAGQMTAAGIPSTFILGADRTMLDHVVGFSEKAEDRWKQIIEKRLKPARKSR*
Ga0180073_11278301	3300015256	Soil	VQPFLKRYNISLPVYSAAPEDVAQMTAMGIPSTFILGPDRTLLDMAVGFSSEVEERWRKVVEKHLRARK*
Ga0132258_127125741	3300015371	Arabidopsis Rhizosphere	YNISLPVYFASPEDAGQMTAMGIPSTFIIGPDRVLIDRAVGYSSQVEDRWKQLIEKKLKPAKKPH*
Ga0132258_131831802	3300015371	Arabidopsis Rhizosphere	VLAVNIDADRRRIDPFLKKFNLSLPIYYAAPEEAAAMTSMGIPSTFILAPDRKLIDRAVGFSPDVEEHWKQVVEKHLKARKPAH*
Ga0132256_1036322541	3300015372	Arabidopsis Rhizosphere	AVNIDADRARIEPFLKRYNISLPIYYAAPEEAAAMTAMGIPSTFILGPDRTLVDRAVGYSPDVEERWKQVVEKHLKAKKPAH*
Ga0132255_1021260702	3300015374	Arabidopsis Rhizosphere	SLPIYYAAPEEAAAMTAMGIPSTFILAPDRTLVDRAVGYSPDVEERWKQVVEKHLKTRKSAH*
Ga0132255_1029933072	3300015374	Arabidopsis Rhizosphere	VYYASPEDAGQMTAAGIPSTFLIGADRTLIQNWVGYSADTENNWKQLIEKHLKARKSGR*
Ga0132255_1039830862	3300015374	Arabidopsis Rhizosphere	LSLPIYYAAPEEAAAMTSMGIPSTFILAPDRKLIDRAVGFSPDVEEHWKQVVEKHLKARKPAH*
Ga0187777_105436171	3300017974	Tropical Peatland	KMYDTYSDRNFVVVSVNVDADRKRVDPFLKQFNISLPVYFAAPEDAGPLTATGIPSTFILGPDRALVDRAVGYSPEWEERWKKVVERYLKSRK
Ga0187777_114014081	3300017974	Tropical Peatland	PVYFAAPEDAGPLTATGIPSTFILGPDRALVDRAVGYSPEWEERWKKVVERYLKSRK
Ga0187765_108640321	3300018060	Tropical Peatland	PEDAGPLTASGIPSTFLLAADRTLLDRQVGYAPSVEDRWKKILEKHLRAKK
Ga0184627_103201451	3300018079	Groundwater Sediment	SLPIYYASPEDAGPLTAYGIPSTFILAADRTMLDSQVGYAPNVEDRWKKILEKHLRSKK
Ga0190265_106159693	3300018422	Soil	NFVVMAINVDADRKRVPPFLKRYNISLPVYSAAPEDVAQMTAMGIPSTFILGPDRTLIDMAVGFSPEIEERWKKVIEKHLKARK
Ga0210377_107722641	3300021090	Groundwater Sediment	VVLAINVDADRKRVAPFLKRYNISLPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEDRWKRVVEKHLKKK
Ga0209640_104786611	3300025324	Soil	AINVDADRKRVAPFMKRYNISLPVYSAAPEDVAQMTAMGIPSTFILGPDRILIDMAVGFSPDVEERWKKVVEKHLKARK
Ga0207653_103759602	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VRNFVVLAVNVDADRNRVQPFMKRYNISLPIYYASPEDAGQMTAEGIPSTFIIGADRTMLDHVVGFSEKAEDRWKQIIEKRLKPARKSR
Ga0207643_106901631	3300025908	Miscanthus Rhizosphere	DRKRVDPFVKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLIDRAVGYSPEWEDRWKKVVEKHLKTRKQ
Ga0207662_103440891	3300025918	Switchgrass Rhizosphere	FMKQFNISVPVYFAAPEDAGPLTASGIPSTFLLSAERTLLDRQVGYAPSVEDRWKKILEKHLRAKK
Ga0207649_103495611	3300025920	Corn Rhizosphere	AFMKQFNISVPVYFAAPEDAGPLTASGIPSTFLLSAERTLLDRQVGYAPSVEDRWKKILEKHLRAKK
Ga0207649_113175791	3300025920	Corn Rhizosphere	VYYASPEDAGPLTAMGIPSTFILGPDRTLMDRFVGYHPDVEERWKKLLEKTLKARK
Ga0207706_106325102	3300025933	Corn Rhizosphere	SDRNFVVVSVNVDADRKRVSPFMKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLVDRAVGYSPEWEDRWKKVVEKHLKSAHK
Ga0207670_105235122	3300025936	Switchgrass Rhizosphere	VEPFLKRFNISLPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEERWKKVVEKHLKSKK
Ga0207668_114367342	3300025972	Switchgrass Rhizosphere	SLPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEERWKKVVEKHLKSKK
Ga0207658_114945151	3300025986	Switchgrass Rhizosphere	PFLKRFNISLPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEERWKKVVEKHLKSKK
Ga0207658_120875041	3300025986	Switchgrass Rhizosphere	VVVSVNVDADRKRVDPFVKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLIDRAVGYSPEWEDRWKKVVEKHLKTRKQ
Ga0207703_106229682	3300026035	Switchgrass Rhizosphere	DRNFVVVSVNVDADRKRVDPFVKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLIDRAVGYSPEWEDRWKKVVEKHLKTRKQ
Ga0256867_100955642	3300026535	Soil	PFMKRYNISLPVYSAAPEDVAQMTAMGIPSTFILGPDRMLIDMAVGFSPDVEERWKKVVEKHLKARK
Ga0209971_10047365	3300027682	Arabidopsis Thaliana Rhizosphere	LPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEDRWKRVVEKHLKKK
Ga0209966_11111151	3300027695	Arabidopsis Thaliana Rhizosphere	AINVDADRKRVAPFMKRYNISLPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEDRWKRVVEKHLKKK
Ga0209486_106134521	3300027886	Agricultural Soil	VLPFLKKHNISLPVYSAAPEDVAQMTAMGIPSTFILGPDRTLIDMAVGFSPEKSATGELLVEERWRKVVEKHLKGRK
Ga0268266_101271454	3300028379	Switchgrass Rhizosphere	QFNISLPVYYASPEDAGPLTAMGIPSTFILGPDRTLMDRFVGYHPDVEDRWKKLLEKTLKARK
Ga0268266_111748311	3300028379	Switchgrass Rhizosphere	DADRKRVSPFVKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPDRTLIDRAVGYSPEWEDRWKKVVEKHLKARK
Ga0307504_100741783	3300028792	Soil	ISLPVYYASPEDAGPLTASGIPSTFILAADRTMLDSQVGYSPNVEDRWKKLLERHLQSKK
Ga0307498_102052161	3300031170	Soil	RRVASFLKQFNISLPVYYAAPEDAGPLTAGGIPSTFILGPDRALVDRAVGYSPQWEERWKKVVEKYLKPRK
Ga0318516_103122691	3300031543	Soil	YDTYSDRNFVVVSVNVDADRRRVEPFLKQFNISLPVYFASPEDAGPLTATGIPSTFIIGPDRTLVDRAVGYSPEWEERWKKVVEKYSKSRK
Ga0318538_108003562	3300031546	Soil	FNISLPVYFASPEDAGPLTATGIPSTFIIGPDRTLVDRAVGYSPEWEERWKKVVEKYSNSKSRK
Ga0315290_104539323	3300031834	Sediment	RVGAFLKQFNISIPVYYAAPEDAGPLTAGGIPSTFILGPDRTLIDRAVGYSPAQEDRWKKVVEKYLKPRK
Ga0306925_116989901	3300031890	Soil	VVSVNVDADRRRVEPFLKQFNISLPVYFASPEDAGPLTATGIPSTFIIGPDRTLVDRAVGYSPEWEERWKKVVEKYSKSRK
Ga0326597_112205852	3300031965	Soil	RRNNISLPVYYASPEDAGQMTAAGIPSTFILGPDRTLLDHMVGYSAHAEERWKQIIEKRLKARKTR
Ga0310899_104459561	3300032017	Soil	SLPVYYASPEDAGPLTAMGIPSTFILGPDRTLMDRFVGYHPDVEDRWKKLLEKTLKARK
Ga0318575_105918041	3300032055	Soil	TYSDRNFVVVSVNVDADRRRVEPFLKQFNISLPVYFASPEDAGPLTATGIPSTFIIGPDRTLVDRAVGYSPEWEERWKKVVEKYSKSRK
Ga0318518_103147601	3300032090	Soil	SDRNFVVVSVNVDADRRRVEPFLKQFNISLPVYFASPEDAGPLTATGIPSTFIIGPDRTLVDRAVGYSPEWEERWKKVVEKYSKSRK
Ga0307471_1010545361	3300032180	Hardwood Forest Soil	YSDRNFVVLAVNLDADRRRIEPFLKHYNISLPVYYAAPEDAGQMTQMGIPSTFIVGPDRTLIDQAVGYSPAAEERWNQIIEKHLKARKPSR
Ga0307472_1002565401	3300032205	Hardwood Forest Soil	NLSLPIYYAAPEEAAAMTSMGIPSTFILAPDRKLIDRAVGFSPDVEEHWKQVVEKHLKARKPAH
Ga0335079_115837272	3300032783	Soil	LKQFNISLPVYFASPEDAGPLTATGIPSTFIISPDRTLVDRAVGYSPEWEERWKKVVEKYSKSRK
Ga0316619_113062602	3300033414	Soil	VVLAVNVDADRKRVSPFLKQFNISLPVYFAAPEDAGPLTAMGIPSTFILGPERTLVDRYVGYSPDVEERWKKVLEKNLKARK
Ga0247829_112917901	3300033550	Soil	SLPVYYASPEDAGPLTAMGIPSTFILGPDRTLMDRFVGYHPDVEERWKKLLEKTLKARK
Ga0314864_0126193_470_637	3300033805	Peatland	YFAAPEDAGPLTATGIPSTFIIAPDRTLVDRAVGYSPEWEERWKKVVEKYSKVRK
Ga0364945_0247706_1_204	3300034115	Sediment	SFLKQFNISIPVYYAAPEDAGPLTAGGIPSTFILGPDRALLDRAVGYSPAWEDRWKKVVEKYLKPRK
Ga0364934_0137301_720_923	3300034178	Sediment	AFLKQFNISLPVYYAAPEDAGPLTAGGIPSTFILGPDRSLIDRAVGYSPAWEDRWKKVVEKYLKPRK
Ga0373959_0060427_640_837	3300034820	Rhizosphere Soil	LKRFNISLPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEERWKKVVEKHLKSKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095927

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences