Metagenome / Metatranscriptome Family F095920

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095920
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	101 residues
Representative Sequence	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Number of Associated Samples	96
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.86 %
% of genes near scaffold ends (potentially truncated)	27.62 %
% of genes from short scaffolds (< 2000 bps)	68.57 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.095 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.191 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.238 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 17.82% β-sheet: 10.89% Coil/Unstructured: 71.29%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13561	adh_short_C2	30.48
PF00575	S1	22.86
PF03726	PNPase	10.48
PF03725	RNase_PH_C	6.67
PF02801	Ketoacyl-synt_C	4.76
PF02033	RBFA	1.90
PF00312	Ribosomal_S15	1.90
PF11987	IF-2	0.95
PF16198	TruB_C_2	0.95
PF00795	CN_hydrolase	0.95
PF00583	Acetyltransf_1	0.95
PF06347	SH3_4	0.95
PF07977	FabA	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	17.14
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	6.67
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	6.67
COG0184	Ribosomal protein S15P/S13E	Translation, ribosomal structure and biogenesis [J]	1.90
COG0858	Ribosome-binding factor RbfA	Translation, ribosomal structure and biogenesis [J]	1.90
COG0764	3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase	Lipid transport and metabolism [I]	0.95
COG4706	Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain	Lipid transport and metabolism [I]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.10 %
Unclassified	root	N/A	21.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.10 %
Unclassified	root	N/A	21.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.10 %
Unclassified	root	N/A	21.90 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	72.38 %
Unclassified	root	N/A	21.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	70.48 %
Unclassified	root	N/A	21.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.95 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	66.67 %
Unclassified	root	N/A	21.90 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.95 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	36.19 %
Unclassified	root	N/A	21.90 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	16.19 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.95 %

Name	Rank	Taxonomy	Distribution
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	31.43 %
Unclassified	root	N/A	21.90 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	16.19 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2.86 %
Alicyclobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	31.43 %
Unclassified	root	N/A	21.90 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	16.19 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2.86 %
Kyrpidia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Kyrpidia	0.95 %

Name	Rank	Taxonomy	Distribution
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	31.43 %
Unclassified	root	N/A	21.90 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	16.19 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2.86 %
Kyrpidia tusciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Kyrpidia → Kyrpidia tusciae	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16524983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1936	Open in IMG/M
2088090014\|GPIPI_16524984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2202	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig74020	Not Available	758	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1001223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3852	Open in IMG/M
3300002067\|JGI24735J21928_10031554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1570	Open in IMG/M
3300002459\|JGI24751J29686_10004714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2769	Open in IMG/M
3300004157\|Ga0062590_102001609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Kyrpidia → Kyrpidia tusciae	601	Open in IMG/M
3300004633\|Ga0066395_10348211	Not Available	823	Open in IMG/M
3300004800\|Ga0058861_10980430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	568	Open in IMG/M
3300004801\|Ga0058860_12065425	Not Available	767	Open in IMG/M
3300005290\|Ga0065712_10294552	Not Available	871	Open in IMG/M
3300005294\|Ga0065705_10260390	Not Available	1163	Open in IMG/M
3300005295\|Ga0065707_10102069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2828	Open in IMG/M
3300005329\|Ga0070683_100143849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2259	Open in IMG/M
3300005332\|Ga0066388_100585556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1740	Open in IMG/M
3300005332\|Ga0066388_107072417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	564	Open in IMG/M
3300005406\|Ga0070703_10003591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4407	Open in IMG/M
3300005435\|Ga0070714_100255792	Not Available	1620	Open in IMG/M
3300005436\|Ga0070713_100934883	Not Available	835	Open in IMG/M
3300005439\|Ga0070711_101566304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	576	Open in IMG/M
3300005616\|Ga0068852_100095746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2667	Open in IMG/M
3300005713\|Ga0066905_100000260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13155	Open in IMG/M
3300005713\|Ga0066905_100333628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1205	Open in IMG/M
3300005764\|Ga0066903_100443574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2164	Open in IMG/M
3300005764\|Ga0066903_103089278	Not Available	901	Open in IMG/M
3300005764\|Ga0066903_105052671	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005844\|Ga0068862_100002716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15523	Open in IMG/M
3300005983\|Ga0081540_1257431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	607	Open in IMG/M
3300006028\|Ga0070717_10268110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1512	Open in IMG/M
3300006173\|Ga0070716_101197995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	610	Open in IMG/M
3300006175\|Ga0070712_101512562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	587	Open in IMG/M
3300006196\|Ga0075422_10004134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4490	Open in IMG/M
3300006196\|Ga0075422_10022860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2137	Open in IMG/M
3300006755\|Ga0079222_10055725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1863	Open in IMG/M
3300006854\|Ga0075425_102677977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	550	Open in IMG/M
3300009156\|Ga0111538_13714470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	529	Open in IMG/M
3300009792\|Ga0126374_10438970	Not Available	924	Open in IMG/M
3300010043\|Ga0126380_10117182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1636	Open in IMG/M
3300010046\|Ga0126384_10476391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1071	Open in IMG/M
3300010048\|Ga0126373_10657739	Not Available	1104	Open in IMG/M
3300010048\|Ga0126373_11542694	Not Available	729	Open in IMG/M
3300010358\|Ga0126370_10025946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	3450	Open in IMG/M
3300010359\|Ga0126376_10092601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2281	Open in IMG/M
3300010361\|Ga0126378_10017720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	6056	Open in IMG/M
3300010399\|Ga0134127_10002065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	14652	Open in IMG/M
3300012883\|Ga0157281_1030583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	739	Open in IMG/M
3300012884\|Ga0157300_1014592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	976	Open in IMG/M
3300012896\|Ga0157303_10003263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2186	Open in IMG/M
3300012897\|Ga0157285_10000665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	5124	Open in IMG/M
3300012900\|Ga0157292_10230941	Not Available	634	Open in IMG/M
3300012904\|Ga0157282_10057488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	972	Open in IMG/M
3300012905\|Ga0157296_10096242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	799	Open in IMG/M
3300012907\|Ga0157283_10000385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	6166	Open in IMG/M
3300012910\|Ga0157308_10023973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1397	Open in IMG/M
3300012912\|Ga0157306_10000966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	5526	Open in IMG/M
3300012913\|Ga0157298_10000326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	5328	Open in IMG/M
3300012948\|Ga0126375_10002091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	6781	Open in IMG/M
3300012951\|Ga0164300_10104075	Not Available	1252	Open in IMG/M
3300012958\|Ga0164299_11481913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	528	Open in IMG/M
3300012961\|Ga0164302_10244302	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300012971\|Ga0126369_10409126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1396	Open in IMG/M
3300012971\|Ga0126369_12509638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	601	Open in IMG/M
3300012989\|Ga0164305_10349569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1113	Open in IMG/M
3300014497\|Ga0182008_10165112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1116	Open in IMG/M
3300015371\|Ga0132258_10377449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	3515	Open in IMG/M
3300015372\|Ga0132256_100423103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1436	Open in IMG/M
3300015374\|Ga0132255_104503981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	591	Open in IMG/M
3300016319\|Ga0182033_10000747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	15717	Open in IMG/M
3300016422\|Ga0182039_11676219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	581	Open in IMG/M
3300016445\|Ga0182038_10003127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	8734	Open in IMG/M
3300019361\|Ga0173482_10000533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	6928	Open in IMG/M
3300021560\|Ga0126371_10348557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1615	Open in IMG/M
3300021560\|Ga0126371_11583466	Not Available	782	Open in IMG/M
3300022889\|Ga0247785_1000486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3499	Open in IMG/M
3300022898\|Ga0247745_1004256	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300022899\|Ga0247795_1084382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	557	Open in IMG/M
3300023073\|Ga0247744_1018924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	982	Open in IMG/M
3300023077\|Ga0247802_1004218	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300025711\|Ga0207696_1026272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1803	Open in IMG/M
3300025885\|Ga0207653_10081416	Not Available	1121	Open in IMG/M
3300025893\|Ga0207682_10321962	Not Available	726	Open in IMG/M
3300025898\|Ga0207692_10284553	All Organisms → cellular organisms → Bacteria → Proteobacteria	1001	Open in IMG/M
3300025900\|Ga0207710_10001906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	9998	Open in IMG/M
3300025905\|Ga0207685_10023958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2086	Open in IMG/M
3300025917\|Ga0207660_10004066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	9539	Open in IMG/M
3300025939\|Ga0207665_10000161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	45172	Open in IMG/M
3300027717\|Ga0209998_10031853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1170	Open in IMG/M
3300027775\|Ga0209177_10046366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1214	Open in IMG/M
3300027787\|Ga0209074_10029618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1553	Open in IMG/M
3300027874\|Ga0209465_10068309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1720	Open in IMG/M
3300027876\|Ga0209974_10058733	All Organisms → cellular organisms → Bacteria → Proteobacteria	1300	Open in IMG/M
3300028597\|Ga0247820_10547289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	793	Open in IMG/M
3300031543\|Ga0318516_10436366	Not Available	753	Open in IMG/M
3300031544\|Ga0318534_10620564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	614	Open in IMG/M
3300031716\|Ga0310813_10267560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1430	Open in IMG/M
3300031719\|Ga0306917_10135432	Not Available	1812	Open in IMG/M
3300031720\|Ga0307469_10161078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1696	Open in IMG/M
3300031768\|Ga0318509_10101055	Not Available	1555	Open in IMG/M
3300031771\|Ga0318546_10681939	Not Available	723	Open in IMG/M
3300031819\|Ga0318568_10449732	Not Available	803	Open in IMG/M
3300031880\|Ga0318544_10372852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	555	Open in IMG/M
3300031893\|Ga0318536_10302520	Not Available	811	Open in IMG/M
3300031910\|Ga0306923_10174514	Not Available	2454	Open in IMG/M
3300031944\|Ga0310884_10022218	All Organisms → cellular organisms → Bacteria	2576	Open in IMG/M
3300032012\|Ga0310902_10248993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1069	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	20.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Plants	Host-Associated → Plants	18.10%
Human	Host-Associated → Human	1.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.57%
Digestive System	Host-Associated → Human → Digestive System	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.05%
Loam	Environmental → Terrestrial → Soil → Loam	20.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.86%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.86%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.90%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.90%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300002067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1	Host-Associated	Open in IMG/M
3300002459	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6	Host-Associated	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00807110	2088090014	Soil	MAAHLIIVACLLAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENASGNAPSGDTGKSGESGAAPDNGNANKPDESGKTDTPQQ
GPIPI_00466350	2088090014	Soil	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
KansclcFeb2_01719450	2124908045	Soil	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKP
AP72_2010_repI_A10DRAFT_10012235	3300000651	Forest Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEA
JGI24735J21928_100315543	3300002067	Corn Rhizosphere	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAP
JGI24751J29686_100047141	3300002459	Corn, Switchgrass And Miscanthus Rhizosphere	MAAHLIIVACLVXEPHTCSEXPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0062590_1020016091	3300004157	Soil	MAAHLIIVACLVAEPHTCSEILVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENATGNAPSGDTGKSGESGAAPENGNANKPDESGKTDTPQQ*
Ga0066395_103482111	3300004633	Tropical Forest Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPTANAPSRDSGKTGESGAAPSSGEANKPAAQGKGDTPQQ*
Ga0058861_109804301	3300004800	Host-Associated	MAAHLIIVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0058860_120654251	3300004801	Host-Associated	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0065712_102945521	3300005290	Miscanthus Rhizosphere	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0065705_102603901	3300005294	Switchgrass Rhizosphere	MAAHFIIVACLLAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENASGNAPSGDTGKSGESGAAPDNGNA
Ga0065707_101020692	3300005295	Switchgrass Rhizosphere	MAAHLIIVACLLAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENASGNAPSGDTGKSGESGAAPDNGNANKPDESGKTDTPQQ*
Ga0070683_1001438493	3300005329	Corn Rhizosphere	MAAHLIIVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0066388_1005855562	3300005332	Tropical Forest Soil	MAAHLIIVACLVAEPHTCSEIPVPDVILEDVISCNHQARELSEKWQADHKDQYLVIATKCVKAEENAAGGDSGKTGEASVAPNSGDKNKPAEPGKSETPQQ*
Ga0066388_1070724171	3300005332	Tropical Forest Soil	MATHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCLKAEDNPAANARGGDSGKTGESAAAPSGGEANKPAEQGKGDTP
Ga0070703_100035916	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MAAHLIIVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTEEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0070714_1002557922	3300005435	Agricultural Soil	MAAHFVVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKADDNPAANAPSSDSGKTGESGAAPSSGEANKPAAQGKGDTPQQ*
Ga0070713_1009348832	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAAHFVVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEANKPAAQGKGDTPQQ*
Ga0070711_1015663041	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKADDNPAANAPSSDSGKTGESGAAPSSGEANKPAAQGKGDTPQQ*
Ga0068852_1000957461	3300005616	Corn Rhizosphere	HTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0066905_1000002605	3300005713	Tropical Forest Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEANKPAAQGKGDTPQQ*
Ga0066905_1003336282	3300005713	Tropical Forest Soil	MEGKQAMAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNSGDTNKPAERGKSETPQQ*
Ga0066903_1004435742	3300005764	Tropical Forest Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEEGATGNVPGSDGGKTGESSAAPSGGEANKPAEQGNGDTPRQ*
Ga0066903_1030892781	3300005764	Tropical Forest Soil	VIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCLKAEDNPAANARGGDSGKTGESAAAPSGGEANKPAEQGKGDTPQQ*
Ga0066903_1050526711	3300005764	Tropical Forest Soil	RAMAAHFIVIACLVAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSGDSGKTGEPGAGPSSGEANKPAEQGNGDTPQQ*
Ga0068862_10000271612	3300005844	Switchgrass Rhizosphere	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKNQYLVIATKCVKAGENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0081540_12574312	3300005983	Tabebuia Heterophylla Rhizosphere	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNSGDTNKPAERGKSETPQQ*
Ga0070717_102681102	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQH*
Ga0070716_1011979951	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MAAHFVVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSQKWQADHKDQYLVIATKCVKADDNPAANAPSSDSGKTGESGAAPSSGEANKPAA
Ga0070712_1015125622	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEANKPAAQGKGDTP*
Ga0075422_100041341	3300006196	Populus Rhizosphere	MAAHLIIVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAE
Ga0075422_100228602	3300006196	Populus Rhizosphere	MAAHLIIVACLVAEPHTCSEIPVPEVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGNSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0079222_100557252	3300006755	Agricultural Soil	MAAHLIIVACLVAEPHTCSEIPVPDVTLVDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPGEPGKSETPQQ*
Ga0075425_1026779771	3300006854	Populus Rhizosphere	MAAHFVVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEANKPVAQGKGDTPQQ*
Ga0111538_137144701	3300009156	Populus Rhizosphere	MAAHFVVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPS
Ga0126374_104389701	3300009792	Tropical Forest Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKAQYLVIATKCVKAEDNPAANAPSSDSGKIGESGAAPSSGEANKPAAQGKGDTPQQ*
Ga0126380_101171822	3300010043	Tropical Forest Soil	MMARNQDRALLQVSGGRRAMAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEANKPAAQGKGDTPQQ*
Ga0126384_104763912	3300010046	Tropical Forest Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAAKAPSSDSGKTGEPGAAPNKPAEQGNGDTPQQ*
Ga0126373_106577392	3300010048	Tropical Forest Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPTANAPSSDSGKTGESGAAPSSGEANKPAAQGKGDTPQQ*
Ga0126373_115426942	3300010048	Tropical Forest Soil	MAAHFIVIACLIAEPHTCSEIQVSEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEEGATGDVPGSDGGKTGESSAAPSGGEANKPAEQGNGDTPRQ*
Ga0126370_100259462	3300010358	Tropical Forest Soil	VAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPGSDSGKTGESGAAPSSGEANKPAAQGKGDTPQQ*
Ga0126376_100926012	3300010359	Tropical Forest Soil	MMARNQDRALLQVSGGRRAMAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPTANAPSSDSGKTGESGAAPSSGEANKPAAQGKGDTPQQ*
Ga0126378_100177207	3300010361	Tropical Forest Soil	MATHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPTANAPSSDSGKTGESGAAPSSGEANKPAAQGKGDTPQQ*
Ga0134127_1000206513	3300010399	Terrestrial Soil	MAAHLIIVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGGDSGKTGEPGVAPNRGDTNKPAEPGKSETPQQ*
Ga0157281_10305832	3300012883	Soil	CSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0157300_10145922	3300012884	Soil	AMAAHLIIVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0157303_100032632	3300012896	Soil	MEEQAMAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0157285_100006654	3300012897	Soil	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGNSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0157292_102309412	3300012900	Soil	CSSSRTDPASYGSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTEEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0157282_100574882	3300012904	Soil	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKEQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0157296_100962422	3300012905	Soil	MAAHLIIVACLVAEPHSCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0157283_100003853	3300012907	Soil	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARALSEKWQTDHKDQYLVIATKCVKAGENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0157308_100239732	3300012910	Soil	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAGENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0157306_100009666	3300012912	Soil	LKEKWRKQAMAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0157298_100003262	3300012913	Soil	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKNQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0126375_100020913	3300012948	Tropical Forest Soil	MMARNQDRALLQVIGGRRAMAAHFVVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPGSDSGKTGESGAAPSSGEANKPAAQGKGDTPQQ*
Ga0164300_101040752	3300012951	Soil	MAAHLIIVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQPLINHDL*
Ga0164299_114819131	3300012958	Soil	MAAHLIIVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETP
Ga0164302_102443021	3300012961	Soil	EPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0126369_104091262	3300012971	Tropical Forest Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTEESGAAPSSGEANKPAAQGKGDTPQQ*
Ga0126369_125096382	3300012971	Tropical Forest Soil	MATHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCLKAEDNPAANARGGDSGKTGESAAAPSGGEANKPAEKGKGDTPQQ*
Ga0164305_103495692	3300012989	Soil	WRKQAMAAHLIIVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0182008_101651122	3300014497	Rhizosphere	MAAHLIIVACLVTEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0132258_103774493	3300015371	Arabidopsis Rhizosphere	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAVGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0132256_1004231032	3300015372	Arabidopsis Rhizosphere	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKGQTDHKNQYLVIATKCVKAGENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ*
Ga0132255_1045039811	3300015374	Arabidopsis Rhizosphere	MATHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCLKAEDNPAANAPSSDSGKTGESGAAPSSGEANKPVAQGKGDTPQQ*
Ga0182033_100007479	3300016319	Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKMGESGAAPSSGEANTPAAQGKGDTPQQ
Ga0182039_116762192	3300016422	Soil	MAAHFIVIACLVAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDRGKTGGSGAAPSSGEANTPAAQGKGDTPQQ
Ga0182038_100031276	3300016445	Soil	MAAHFIVIACLVAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEANTPQGKGDTPQQ
Ga0173482_100005336	3300019361	Soil	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKEQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0126371_103485572	3300021560	Tropical Forest Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPTANAPSSDSGKTGESGAAPSSGEANKPAAQGKGDTPQQ
Ga0126371_115834661	3300021560	Tropical Forest Soil	MATHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCLKAEDNPAANARGGDSGKTGESAAAPSGGEANKPAEQGKGDTPQQ
Ga0247785_10004861	3300022889	Soil	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0247745_10042562	3300022898	Soil	MAAHLIIVVCLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0247795_10843821	3300022899	Soil	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDPGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0247744_10189241	3300023073	Soil	EIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0247802_10042182	3300023077	Soil	VAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0207696_10262722	3300025711	Switchgrass Rhizosphere	MAAHLIIVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0207653_100814161	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MAAHLIIVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTEEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0207682_103219621	3300025893	Miscanthus Rhizosphere	MAAHLIIVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGGDSGKTGEPSVAPNRGDTNKPA
Ga0207692_102845531	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAAHFVVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEANKPAAQGKGDTPQQ
Ga0207710_100019064	3300025900	Switchgrass Rhizosphere	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0207685_100239583	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGGDSGKTGEPGVAPNRGDTNKPAEPGKSETPQQ
Ga0207660_100040668	3300025917	Corn Rhizosphere	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKNQYLVIATKCVKAEENAAGGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0207665_1000016126	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MAAHLIIVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEQNAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0209998_100318532	3300027717	Arabidopsis Thaliana Rhizosphere	MAAHLIIVACLLAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENASGNAPSGDTGKSGESGAAPENGNANKPDESGKTDTPQQ
Ga0209177_100463662	3300027775	Agricultural Soil	MAAHLIIVACLVAETHICSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0209074_100296182	3300027787	Agricultural Soil	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPGEPGKSETPQQ
Ga0209465_100683093	3300027874	Tropical Forest Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSGDSGKTGEPGAGPSSGEANKPAEQGNGDTPQQ
Ga0209974_100587334	3300027876	Arabidopsis Thaliana Rhizosphere	MAAHLIIVACLVAEPHTCSEIPVPEVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0247820_105472892	3300028597	Soil	MAAHFIIVACLLAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENASGNAPSGDTGKSGESGAAPDNGNANKPDESGKTDTPQQ
Ga0318516_104363662	3300031543	Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEANTPQGKGDTPQQ
Ga0318534_106205641	3300031544	Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPGSGEANKPAAQGKGDTPQQ
Ga0310813_102675602	3300031716	Soil	MAAHLIIVACLVAEPHTCSEILVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENATGNAPSGDTGKSGESGAAPENGNANKPDESGKTDTPQQ
Ga0306917_101354322	3300031719	Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEANTPAAQGKGDTPQQ
Ga0307469_101610783	3300031720	Hardwood Forest Soil	MAAHLIIVACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGGDSGKTGEPGVAPN
Ga0318509_101010552	3300031768	Soil	CSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEANTPQGKGDTPQQ
Ga0318546_106819391	3300031771	Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEANTPQGKGD
Ga0318568_104497321	3300031819	Soil	VIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEANTPAAQGKGDTPQQ
Ga0318544_103728522	3300031880	Soil	MAAHFIVIACLIAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPGSGEANKPAAQGKGDTPQ
Ga0318536_103025201	3300031893	Soil	FIVIACLVAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPSSGEANTPQGKGDTPQQ
Ga0306923_101745142	3300031910	Soil	MAAHFIVIACLVAEPHTCSEIQVPEAAVEDVISCNHQARQLSEKWQADHKDQYLVIATKCVKAEDNPAANAPSSDSGKTGESGAAPGSGEANKPAAQGKGDTPQQ
Ga0310884_100222181	3300031944	Soil	ACLVAEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ
Ga0310902_102489931	3300032012	Soil	IVACLVPEPHTCSEIPVPDVTLEDVISCNHQARELSEKWQTDHKDQYLVIATKCVKAEENAAGGDSGKTGEPSVAPNRGDTNKPAEPGKSETPQQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095920

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences