Metagenome / Metatranscriptome Family F095916

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095916
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	51 residues
Representative Sequence	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSAQTRSRTSAFSLAEAG
Number of Associated Samples	96
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.05 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	95.24 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.333 % of family members)
Environment Ontology (ENVO)	Unclassified (30.476 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.524 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF07963	N_methyl	29.52
PF13544	Obsolete Pfam Family	6.67
PF01551	Peptidase_M23	0.95
PF14584	DUF4446	0.95
PF13432	TPR_16	0.95
PF08327	AHSA1	0.95
PF07228	SpoIIE	0.95
PF03793	PASTA	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.14 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.14 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.14 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	90.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.86 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	90.48 %
Unclassified	root	N/A	2.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.86 %
Unclassified	root	N/A	2.86 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	22.86 %
Unclassified	root	N/A	2.86 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.86 %
Unclassified	root	N/A	2.86 %
unclassified Caulobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → unclassified Caulobacteraceae	0.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.86 %
Unclassified	root	N/A	2.86 %
Caulobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → unclassified Caulobacteraceae → Caulobacteraceae bacterium	0.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000041\|ARcpr5oldR_c006204	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c011677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	737	Open in IMG/M
3300000443\|F12B_10416896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1068	Open in IMG/M
3300000891\|JGI10214J12806_10064202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	942	Open in IMG/M
3300000891\|JGI10214J12806_13851122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300000956\|JGI10216J12902_101077298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1064	Open in IMG/M
3300000956\|JGI10216J12902_109538618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1400	Open in IMG/M
3300000956\|JGI10216J12902_116660194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300002568\|C688J35102_118669382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300004081\|Ga0063454_100137298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1263	Open in IMG/M
3300004081\|Ga0063454_100619436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300004114\|Ga0062593_101144755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	812	Open in IMG/M
3300005093\|Ga0062594_101253485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	740	Open in IMG/M
3300005172\|Ga0066683_10233561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1139	Open in IMG/M
3300005294\|Ga0065705_10482496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	794	Open in IMG/M
3300005337\|Ga0070682_100788173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	771	Open in IMG/M
3300005355\|Ga0070671_101731753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300005364\|Ga0070673_100874202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300005406\|Ga0070703_10046545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1371	Open in IMG/M
3300005435\|Ga0070714_101062878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	788	Open in IMG/M
3300005437\|Ga0070710_11169031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300005438\|Ga0070701_10055019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2077	Open in IMG/M
3300005441\|Ga0070700_101371220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300005468\|Ga0070707_100870699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M
3300005526\|Ga0073909_10006223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3532	Open in IMG/M
3300005526\|Ga0073909_10043859	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300005526\|Ga0073909_10611042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300005540\|Ga0066697_10126365	All Organisms → cellular organisms → Bacteria → Proteobacteria	1502	Open in IMG/M
3300005544\|Ga0070686_100262880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1266	Open in IMG/M
3300005561\|Ga0066699_10783057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	673	Open in IMG/M
3300005563\|Ga0068855_100728887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1059	Open in IMG/M
3300005719\|Ga0068861_100041189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3459	Open in IMG/M
3300005843\|Ga0068860_101277008	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300006173\|Ga0070716_101352000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300006358\|Ga0068871_102007741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300006755\|Ga0079222_11959726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300006806\|Ga0079220_11693167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300006844\|Ga0075428_101155224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	817	Open in IMG/M
3300006845\|Ga0075421_101420621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300006881\|Ga0068865_100423081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1096	Open in IMG/M
3300006903\|Ga0075426_10199949	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300006914\|Ga0075436_100860112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300009093\|Ga0105240_11578059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300009094\|Ga0111539_13490528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300009148\|Ga0105243_12982746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300009156\|Ga0111538_11776941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	776	Open in IMG/M
3300009177\|Ga0105248_10707792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1136	Open in IMG/M
3300010043\|Ga0126380_11214952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300010337\|Ga0134062_10731302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300010366\|Ga0126379_11243810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	851	Open in IMG/M
3300010373\|Ga0134128_10552932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1282	Open in IMG/M
3300010400\|Ga0134122_10092108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2387	Open in IMG/M
3300010401\|Ga0134121_10191181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1766	Open in IMG/M
3300012487\|Ga0157321_1007073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	781	Open in IMG/M
3300012490\|Ga0157322_1001847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1119	Open in IMG/M
3300012495\|Ga0157323_1011504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	714	Open in IMG/M
3300012497\|Ga0157319_1054564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300012896\|Ga0157303_10006216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1675	Open in IMG/M
3300012900\|Ga0157292_10178467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300012907\|Ga0157283_10036182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300012971\|Ga0126369_13009534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300012984\|Ga0164309_10023212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3289	Open in IMG/M
3300012987\|Ga0164307_10824896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	739	Open in IMG/M
3300012988\|Ga0164306_11657950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300013102\|Ga0157371_10941447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300013296\|Ga0157374_12373565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300013297\|Ga0157378_11251515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	782	Open in IMG/M
3300013306\|Ga0163162_13152565	Not Available	529	Open in IMG/M
3300015077\|Ga0173483_10400079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	705	Open in IMG/M
3300015372\|Ga0132256_101364642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300018031\|Ga0184634_10411592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300018067\|Ga0184611_1250017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300018431\|Ga0066655_10822870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300019269\|Ga0184644_1560497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300022883\|Ga0247786_1159262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300022898\|Ga0247745_1029188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	818	Open in IMG/M
3300023072\|Ga0247799_1083318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300023263\|Ga0247800_1060315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300025901\|Ga0207688_10366402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → unclassified Caulobacteraceae → Caulobacteraceae bacterium	890	Open in IMG/M
3300025913\|Ga0207695_11288295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300025915\|Ga0207693_10722476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	771	Open in IMG/M
3300025915\|Ga0207693_11253212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300025915\|Ga0207693_11271707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300025941\|Ga0207711_10559314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1067	Open in IMG/M
3300025942\|Ga0207689_11137767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	658	Open in IMG/M
3300025949\|Ga0207667_11450029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300025960\|Ga0207651_11279369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300025960\|Ga0207651_12077679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300026067\|Ga0207678_10645325	Not Available	930	Open in IMG/M
3300026078\|Ga0207702_10962008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	847	Open in IMG/M
3300026116\|Ga0207674_11260939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300026118\|Ga0207675_100626398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1080	Open in IMG/M
3300026121\|Ga0207683_10548017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1069	Open in IMG/M
3300026547\|Ga0209156_10251893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	819	Open in IMG/M
3300026550\|Ga0209474_10314817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	908	Open in IMG/M
3300028145\|Ga0247663_1049078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300028707\|Ga0307291_1135928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300028721\|Ga0307315_10115502	Not Available	798	Open in IMG/M
3300028755\|Ga0307316_10373060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300028784\|Ga0307282_10170858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300028814\|Ga0307302_10064888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1713	Open in IMG/M
3300028875\|Ga0307289_10114172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1105	Open in IMG/M
3300031198\|Ga0307500_10062679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	926	Open in IMG/M
3300032174\|Ga0307470_10183475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1319	Open in IMG/M
3300033551\|Ga0247830_10692441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	809	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.86%
Host-Associated	Host-Associated	37.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.00%
Plants	Host-Associated → Plants	37.14%
Aquatic	Environmental → Aquatic	2.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.19%
Sediment	Environmental → Aquatic → Sediment	1.90%
Freshwater	Environmental → Aquatic → Freshwater	0.95%
Roots	Host-Associated → Plants → Roots	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.76%
Loam	Environmental → Terrestrial → Soil → Loam	15.24%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.95%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.95%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.95%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	3.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.90%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.95%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012487	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510	Host-Associated	Open in IMG/M
3300012490	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610	Host-Associated	Open in IMG/M
3300012495	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610	Host-Associated	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ARcpr5oldR_0062043	3300000041	Arabidopsis Rhizosphere	MRLVQSERGMALVMAIGITTVLAIAGTTAIAYSTSSERQSTQTRSRLTAYALAEAGINNSMA
ARSoilOldRDRAFT_0116772	3300000044	Arabidopsis Rhizosphere	MRLVQSERGMALVMAIGITTVLAIAGTTAIAYSTSSERQSTQTRSRLTAYALAEAGINNS
F12B_104168961	3300000443	Soil	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSAQTRSRTSAFSLAEAGVNNSMAVLNLPTN
JGI10214J12806_100642023	3300000891	Soil	MALVMAIGITSVLGIAGATAIAYSTSGAQEARQSG
JGI10214J12806_138511222	3300000891	Soil	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSAQTRSRTSAFSLAEAGMNNSMAVLNLPTNNA
JGI10216J12902_1010772981	3300000956	Soil	MALVMAIGITTVLAIAGTTAIAYSTSSERQSTQTRSRLTAYALAEAG
JGI10216J12902_1095386181	3300000956	Soil	MRLVQSERGMALVMAIGITTVLAIAGTTAIAYSTSSERQSTQTRSRLTAYALAEAG
JGI10216J12902_1166601942	3300000956	Soil	MALVMAIGITSVLGIAGTTAMVYTSSAAQESQQSSSRQSAFTLAEAGINNVMSILN
C688J35102_1186693822	3300002568	Soil	MALVMAIGITSVLGIAGATAVAYSTSGAQEAQQSGSRQGAFSL
Ga0063454_1001372981	3300004081	Soil	MALVMAVGITAVLLISGTTAIAYSTSGSKQSAQSRSRQSAFSLAESGVN
Ga0063454_1006194362	3300004081	Soil	MALIMAIGITSVLGIAGATAVAYSTSGAQEAQQSGSRQSAFTLAESGINNVMSVLNLPTNNALD
Ga0062593_1011447551	3300004114	Soil	MRLVQSERGMALVMAIGITTVLAIAGTTAIAYSTSSERQSTQTRSRLTAYA
Ga0062594_1012534851	3300005093	Soil	MALVMAIGITSVLGIAGTTAMVYTNSAAQESQQSSSRQNAFSLAEAGINNAMSVLNLPTNNAL
Ga0066683_102335611	3300005172	Soil	MALVMAIGITTVLAIAGTTSMVYTTSNSTESIQTSSRSSAFDLAES
Ga0065705_104824961	3300005294	Switchgrass Rhizosphere	VRVVKCERGIALVMAIGITTVLAIAGTTAIAYSTSSTTESSQTYSRQSAFS
Ga0070682_1007881731	3300005337	Corn Rhizosphere	MALVMAIGITSVLGIAGTTAMVYTNSAAQESQQSSSRQNAFSLAEAGINNAMS
Ga0070671_1017317532	3300005355	Switchgrass Rhizosphere	MRLRLRGERGMALVMAIGIMAVLSIAGTTAVMYSTSSAQQATQSRSRSDAFSLAE
Ga0070673_1008742021	3300005364	Switchgrass Rhizosphere	MRRRWPGRRVRVESERGIALVMAIGIMAVLGIVGVTVASYSTSATTESNQTQARTSAFALAEGGINNIMAILDLPTNN
Ga0070703_100465451	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MALIMAIGITSVLGIAGATAVAYSTSGAQQAQQSGSRQNAFTL
Ga0070714_1010628781	3300005435	Agricultural Soil	VRVESERGIALVMAIGIMAVLGIVGVTVASYSTSATTESNQTQARTSAFALAEGGINNIMAILD
Ga0070710_111690312	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MALVMAIGIMAVLGIVGVTVASYSASATTESNQTQARTSAFALAEGGINNIMAIL
Ga0070701_100550191	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MALIMAIGITSVLGIAGATAVAYSTSGAQQAQQSGSRQNAFT
Ga0070700_1013712201	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MALVMAIGIMSVLGIAGTTAIAYSTSASTQSSQAQSRQSAFSLAEGGINNIMSILN
Ga0070707_1008706991	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MALVMALGMTVVLGIAGTTAIAYSTSSSTQAVQSRSRGNAFSLAEAGIN
Ga0073909_100062235	3300005526	Surface Soil	MALVMAIGITSVLGIAGATAVAYSTSGAQESQQSGARQNAFSLAEAGINNSMAVLNLPTNNALDAD
Ga0073909_100438592	3300005526	Surface Soil	MALVMAIGIMAVLSIAGTTAVMYSTSSAQQATQSRSRSDAFSLAEA
Ga0073909_106110422	3300005526	Surface Soil	MALVMAIGIMSVLGIAGATAMAYSTSGAQQAQQSGSRQNAFSLSEAGVNN
Ga0066697_101263651	3300005540	Soil	MALVMALGMTVVLGMAGTTAMVYSTSNSTEAYQTRSRGNAFSLAESGINNSMAILDLPTN
Ga0070686_1002628803	3300005544	Switchgrass Rhizosphere	MALVMAIGITSVLGIAGATAVAYSTSGAQESQQSGARQNAFSLAEAGINNS
Ga0066699_107830571	3300005561	Soil	MALVMTIGITTVLGIAGTTAMVYSTSNSTESIQSSSRQDAFSLAEAGINNAMAVLNLPTN
Ga0068855_1007288871	3300005563	Corn Rhizosphere	MALVMAIGITSVLGIAGATAVAYSTSGAQESQQSGARQNAFSLAEA
Ga0068861_1000411895	3300005719	Switchgrass Rhizosphere	MALVMAIGIMSVLGIAGTTAIAYSTSASTQSSQAQSRQ
Ga0068860_1012770082	3300005843	Switchgrass Rhizosphere	MAIGITTVLAIAGTTAIAYSTSSSTQSTQTRSRSDAFTLAEAGINNVMAV
Ga0070716_1013520001	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MALVMAIGIMAVLGIVGVTVASYSASATTESNQTQARTSAFALAEGGINNIMAILDLP
Ga0068871_1020077412	3300006358	Miscanthus Rhizosphere	MALVMAIGIMAVLGIVGVTVASYSASATTESNQTQARTSAFALAEGGINNIMAILD
Ga0079222_119597261	3300006755	Agricultural Soil	MALVMAIGITSVLGIAGTTAMVYTSSAAQESQQSSSRQNA
Ga0079220_116931672	3300006806	Agricultural Soil	MALVMAIGITSVLGIAGTTAMVYTSSAAQESQQSSSRQSAFTLAEAGINNVMSI
Ga0075428_1011552242	3300006844	Populus Rhizosphere	MALVMAIGITTVLAIAGTTAIAYSTSSSTQSTQTRSRIDAFTLAEAGINNVMAVLNLPTNNA
Ga0075421_1014206211	3300006845	Populus Rhizosphere	MALIMAIGITSVLGIAGATAVAYSTSGAQEAQQSGSRQS
Ga0068865_1004230813	3300006881	Miscanthus Rhizosphere	MALVMAIGIMSVLGIAGTTAIAYSTSASTQSSQAQSRQSAFSLAEG
Ga0075426_101999491	3300006903	Populus Rhizosphere	MRLRLRGERGMALVMAIGIMAVLSIAGTTAVMYSTSSAQQATQSRSRSDAFSLAEAGINNAM
Ga0075436_1008601121	3300006914	Populus Rhizosphere	MALVMAIGITSVLGIAGTTAMVYTNSAAQESQQSSSRQNAFSLAEAGINNAMSVLNLPTN
Ga0105240_115780592	3300009093	Corn Rhizosphere	MALVMAIGITSVLGIAGATAVAYSTSGAQESQQSGARQNA
Ga0111539_134905282	3300009094	Populus Rhizosphere	MALVMAIGITTVLAIAGTTAIAYSTSSSTQSTQTRSRIDAFTLAEA
Ga0105243_129827461	3300009148	Miscanthus Rhizosphere	MALVMAIGIMSVLGIAGTTAIAYSTSASTQSSQAQSRQSAFSLAEGGINNIMSILNLPTNNA
Ga0111538_117769412	3300009156	Populus Rhizosphere	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSAQTRSRTSAFSLA
Ga0105248_107077923	3300009177	Switchgrass Rhizosphere	MALVMAIGIMSVLGIAGTTAIAYSTSASTQSSQAQSRQSAFSLAE
Ga0126380_112149521	3300010043	Tropical Forest Soil	MAIGIMAVLGIVGTTVMAYSTSATTESNQTGARTSAFALAEGGINN
Ga0134062_107313022	3300010337	Grasslands Soil	MALVMAIGITTVLAIAGTTSMVYTTSNSTESIQTSSRSSAFDL
Ga0126379_112438102	3300010366	Tropical Forest Soil	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSAQTRSR
Ga0134128_105529322	3300010373	Terrestrial Soil	MALIMAIGITSVLGIAGATAVAYSTSGAQQAQQSGSRQNAFTLSEAGVNNAMAVLNLPTNNALD
Ga0134122_100921081	3300010400	Terrestrial Soil	MALVMAIGITSVLGIAGATAVAYSTSGAQASQQSGARQNAFSLAEA
Ga0134121_101911814	3300010401	Terrestrial Soil	MALVMAIGITSVLGIAGATAVAYSTSGAQESQQSGARQ
Ga0157321_10070732	3300012487	Arabidopsis Rhizosphere	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSTQTRSRTSAFSLAEAGVN
Ga0157322_10018473	3300012490	Arabidopsis Rhizosphere	MALVMAIGITTVLAIAGTTAIAYSTSSERQSTQTRSRLTAYALAEAGINNSMAVLNLPT
Ga0157323_10115041	3300012495	Arabidopsis Rhizosphere	MALVMAIGITTVLAIAGTTAIAYSTSSERQSTQTRSRLTAYALAEA
Ga0157319_10545642	3300012497	Arabidopsis Rhizosphere	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSTQTRSRTSAFALA
Ga0157303_100062163	3300012896	Soil	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSAQTRSRTSAFSLAEAGVN
Ga0157292_101784671	3300012900	Soil	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSAQTRSRTSAFSLAEAGVNNS
Ga0157283_100361823	3300012907	Soil	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSAQKRSSTSAFSLAEAGV
Ga0126369_130095342	3300012971	Tropical Forest Soil	MAIGIMAVLGIVGTTVMAYSTSATTESNQTGARTSAFALAEGGINNIMSILDLPTNN
Ga0164309_100232121	3300012984	Soil	MALVMAIGITSVLGIAGTTAIAYSTSGAQESQQSGARQN
Ga0164307_108248962	3300012987	Soil	MALIMAIGITSVLGIAGATAVAYSTSGAQEAQQSGSRQNAFSLAEAG
Ga0164306_116579502	3300012988	Soil	MALVMAIGITSVLGIAGTTAIAYSTSASTQSSQAHSRQSAFSLAEAGINNSM
Ga0157371_109414471	3300013102	Corn Rhizosphere	MALVMAIGITSVLGIAGATAVAYSTSGTQESQQSGARQNAF
Ga0157374_123735651	3300013296	Miscanthus Rhizosphere	MALVMAIGIMTVLAIAGTTAVVYSTSSAQEATQTRTRQSAFSLAEAGINNAMA
Ga0157378_112515151	3300013297	Miscanthus Rhizosphere	MALIMAIGITSVLGIAGATAVAYSTSGAQESQQSGARQNAFS
Ga0163162_131525651	3300013306	Switchgrass Rhizosphere	MALVMAIGITSVLGIAGATAVAYSTSGAQESQQSGARQNAFSLAEAGINNSMAVLNLPTNNALDADTLNK
Ga0173483_104000793	3300015077	Soil	MALVMAIGIMAVLGIVGATVASYSTSATTESNQTQARTSAFALAEGGIN
Ga0132256_1013646421	3300015372	Arabidopsis Rhizosphere	MALVMAIGIMTVLAIAGTTAIAYSTSSAEQSTQTRSRQSAFSLAEAGVNNSMAV
Ga0184634_104115922	3300018031	Groundwater Sediment	VRLVKCERGIALVMAIGITTVLAIAGTTAIAYSTSSSTQSTQTRSRSDAFTLAEAGINNVMAVL
Ga0184611_12500172	3300018067	Groundwater Sediment	VRLVKCERGIALVMAIGITTVLAIAGTTAIAYSTSSSTQSTQTRSRSDAFTLAEAGIN
Ga0066655_108228701	3300018431	Grasslands Soil	MALVMALGMTVVLGMAGTTAMVYSTSNSTQAYQTRSRGNAFSLA
Ga0184644_15604971	3300019269	Groundwater Sediment	MALVLAIGITTVLAIAGTTAIAYSTSSATQATQSRARQSTFSLAEAGMSNAMSVLNLPTN
Ga0247786_11592621	3300022883	Soil	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSAQTRSRTSAFSLAEAGMNNS
Ga0247745_10291881	3300022898	Soil	MALVMAIGIMAVLGIVGATVASYSTSATTESNQTQARTSAFALAEGGINN
Ga0247799_10833181	3300023072	Soil	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSAQTRSRT
Ga0247800_10603151	3300023263	Soil	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSAQTRSRTSAFSLAEAG
Ga0207688_103664021	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MALVMAIGITSVLGIAGTTAMVYTNSAAQESQQSSSRQNAFSLAEAGINNAMSV
Ga0207695_112882951	3300025913	Corn Rhizosphere	MALIMAIGITSVLGIAGATAVAYSTSGAQQAQQSGSRQ
Ga0207693_107224761	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VRVESERGIALVMAIGIMAVLGIVGVTVASYSTSATTESNQTQARTSAFALAEGGINNIMAILDL
Ga0207693_112532121	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VRVESERGIALVMAIGIMAVLGIVGVTVASYSTSATTESNQTQARTSAFALAEGGINNIMAILDLPT
Ga0207693_112717071	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MALVMAIGIMAVLGIVGVTVASYSASATTESNQTQARTSAFALAEGGINNIMAILDL
Ga0207711_105593141	3300025941	Switchgrass Rhizosphere	MALVMAIGIMSVLGIAGTTAIAYSTSASTQSSQAQSRQS
Ga0207689_111377672	3300025942	Miscanthus Rhizosphere	MALVMAIGITSVLGIAGTTAMVYTSSAAQESQQSSSRQSAFTL
Ga0207667_114500291	3300025949	Corn Rhizosphere	MALVMAIGIMTVLAIAGTTAIAYSTSSAQQSAQTRSRTSAFSLAEAGVNN
Ga0207651_112793692	3300025960	Switchgrass Rhizosphere	MRRRWPGRRVRVESERGIALVMAIGIMAVLGIVGVTVASYSTSATTESNQTQARTSAFALAEGGINNIMAILDLPTNNA
Ga0207651_120776792	3300025960	Switchgrass Rhizosphere	MALVMAIGITSVLGIAGTTAMVYTSSAAQESQQSSS
Ga0207678_106453251	3300026067	Corn Rhizosphere	MALVMAIGIMAVLGIAGTTAVAYSTSATTESSQTQSRASAFSLAEAGINNVMSILDLP
Ga0207702_109620082	3300026078	Corn Rhizosphere	MALVMAIGITSVLGIAGTTAMVYTNSAAQESQQSSSRQNAFSLAEAGI
Ga0207674_112609391	3300026116	Corn Rhizosphere	MALVMAIGITSVLGIAGTTAMVYTNSAAQESQQSSSRQNAFSLAEA
Ga0207675_1006263981	3300026118	Switchgrass Rhizosphere	MALVMAIGIMTVLAIAGTTAVVYSTSSAQEATQTRTRQSAFSLAEAGINNAMAVLNLPTN
Ga0207683_105480171	3300026121	Miscanthus Rhizosphere	MALVMAIGIMSVLGIAGTTAIAYSTSASTQSSQAQSRQSA
Ga0209156_102518932	3300026547	Soil	MALVMALGMTVVLGIAGTTAMVYSTSNSTQAYQSRSRGNAFS
Ga0209474_103148171	3300026550	Soil	MALVMALGMTVVLGIAGTTAMAYSTSNSTQAYQSRSRGNAFSLAESGINNSMAILDLP
Ga0247663_10490782	3300028145	Soil	VRVESERGIALVMAIGIMAVLSIAGTTAVMYSTSSAQQASQSRSRSNAFSLAWDDS
Ga0307291_11359282	3300028707	Soil	MALVMAIGIMSVLGIAGTTALAYSTSASTQSSQAQSRQSA
Ga0307315_101155021	3300028721	Soil	MALVLAIGITTVLAIAGTTAIAYSTSSATQATQSRARQ
Ga0307316_103730601	3300028755	Soil	MALVMAIGITSVLAIAGTTALAYSTSGAQEAQQSGSRQNAFTLAEAGINNAMAVLNLPTNNALDADTLNK
Ga0307282_101708581	3300028784	Soil	MALVLAIGITTVLAIAGTTAIAYSTSSATQATQSRARQSTFSLAEAGM
Ga0307302_100648881	3300028814	Soil	MALVLAIGITTVLAIAGTTAIAYSTSSATQATQSRA
Ga0307289_101141721	3300028875	Soil	MALIMAIGITSVLGIAGATAITYSTSGAQESQQSSSRQSAFSLAEAGINNVMSILNLPTNNAL
Ga0307500_100626791	3300031198	Soil	MALVMAIGITSVLGIAGTTAIAYSTSGAQEAQQSGSRQSAFTLAE
Ga0307470_101834751	3300032174	Hardwood Forest Soil	MALVMAIGIMTVLAIAGTTAVVYSPSSAQEATQTRT
Ga0247830_106924411	3300033551	Soil	MALVMAIGIMTVLAIAGTTAVVYSTSSAQEATQTRTRQSAYSRAETGINKAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095916

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences