NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F095900

Metagenome Family F095900

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095900
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 57 residues
Representative Sequence VKLDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLSEEDLRALHALRR
Number of Associated Samples 90
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 40.78 %
% of genes near scaffold ends (potentially truncated) 35.24 %
% of genes from short scaffolds (< 2000 bps) 86.67 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (83.810 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil
(17.143 % of family members)
Environment Ontology (ENVO) Unclassified
(26.667 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(41.905 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.25%    β-sheet: 22.89%    Coil/Unstructured: 63.86%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF12200DUF3597 2.86
PF08240ADH_N 2.86
PF13202EF-hand_5 1.90
PF07510DUF1524 1.90
PF01189Methyltr_RsmB-F 0.95
PF02574S-methyl_trans 0.95
PF05532CsbD 0.95
PF06863DUF1254 0.95
PF01381HTH_3 0.95
PF03900Porphobil_deamC 0.95
PF11064DUF2865 0.95
PF16242Pyrid_ox_like 0.95
PF09190DALR_2 0.95
PF00036EF-hand_1 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG014416S rRNA C967 or C1407 C5-methylase, RsmB/RsmF familyTranslation, ribosomal structure and biogenesis [J] 0.95
COG0181Porphobilinogen deaminaseCoenzyme transport and metabolism [H] 0.95
COG0215Cysteinyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.95
COG0646Methionine synthase I (cobalamin-dependent), methyltransferase domainAmino acid transport and metabolism [E] 0.95
COG2040Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)Amino acid transport and metabolism [E] 0.95
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 0.95
COG5361Uncharacterized conserved proteinMobilome: prophages, transposons [X] 0.95

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.81 %
UnclassifiedrootN/A16.19 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c0622341All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria868Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0863792All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1928Open in IMG/M
3300000567|JGI12270J11330_10000737All Organisms → cellular organisms → Bacteria → Proteobacteria24857Open in IMG/M
3300000567|JGI12270J11330_10001107All Organisms → cellular organisms → Bacteria20259Open in IMG/M
3300000567|JGI12270J11330_10001114All Organisms → cellular organisms → Bacteria → Proteobacteria20195Open in IMG/M
3300000787|JGI11643J11755_11574038All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria931Open in IMG/M
3300004114|Ga0062593_102478497All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria587Open in IMG/M
3300004157|Ga0062590_100129607Not Available1677Open in IMG/M
3300004463|Ga0063356_102370740All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria811Open in IMG/M
3300004481|Ga0069718_13765041All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria753Open in IMG/M
3300005093|Ga0062594_100492928All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales1033Open in IMG/M
3300005168|Ga0066809_10170162All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria575Open in IMG/M
3300005330|Ga0070690_100626828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria819Open in IMG/M
3300005334|Ga0068869_101880020All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria536Open in IMG/M
3300005336|Ga0070680_100704572All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria869Open in IMG/M
3300005356|Ga0070674_100768505Not Available829Open in IMG/M
3300005367|Ga0070667_100553375All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1057Open in IMG/M
3300005367|Ga0070667_100840870All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria853Open in IMG/M
3300005438|Ga0070701_10542829All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Gallionellales bacterium GWA2_59_43761Open in IMG/M
3300005444|Ga0070694_100878241All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium739Open in IMG/M
3300005459|Ga0068867_100556119Not Available995Open in IMG/M
3300005549|Ga0070704_100326918All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1287Open in IMG/M
3300005764|Ga0066903_101414440All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1307Open in IMG/M
3300005764|Ga0066903_102503299All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria999Open in IMG/M
3300005843|Ga0068860_102688920All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria516Open in IMG/M
3300006057|Ga0075026_100853469All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria556Open in IMG/M
3300006059|Ga0075017_100658626All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria803Open in IMG/M
3300006162|Ga0075030_101602963All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria509Open in IMG/M
3300006174|Ga0075014_100223166All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria961Open in IMG/M
3300006880|Ga0075429_101007114All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria728Open in IMG/M
3300006969|Ga0075419_10894851All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium640Open in IMG/M
3300009078|Ga0105106_10655580All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium751Open in IMG/M
3300009094|Ga0111539_10584282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1301Open in IMG/M
3300009094|Ga0111539_11314812All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria839Open in IMG/M
3300009098|Ga0105245_11301556All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria776Open in IMG/M
3300009100|Ga0075418_10520198Not Available1278Open in IMG/M
3300009148|Ga0105243_10657586Not Available1016Open in IMG/M
3300009148|Ga0105243_11887802All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria630Open in IMG/M
3300009156|Ga0111538_11526306All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium842Open in IMG/M
3300009166|Ga0105100_10942515All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria539Open in IMG/M
3300009168|Ga0105104_10175682All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1161Open in IMG/M
3300009521|Ga0116222_1307451All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria685Open in IMG/M
3300009524|Ga0116225_1014633All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae4156Open in IMG/M
3300009545|Ga0105237_12367674All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria541Open in IMG/M
3300009698|Ga0116216_10340222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria913Open in IMG/M
3300009824|Ga0116219_10043887All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2662Open in IMG/M
3300009824|Ga0116219_10098893All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1703Open in IMG/M
3300010379|Ga0136449_100095846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria6129Open in IMG/M
3300011119|Ga0105246_11655831Not Available606Open in IMG/M
3300011119|Ga0105246_12520966All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria506Open in IMG/M
3300012931|Ga0153915_11642749All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria752Open in IMG/M
3300012951|Ga0164300_10206520All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria966Open in IMG/M
3300012957|Ga0164303_10984240All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria599Open in IMG/M
3300012961|Ga0164302_10179200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1280Open in IMG/M
3300013096|Ga0157307_1064865All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria712Open in IMG/M
3300013306|Ga0163162_10312129All Organisms → cellular organisms → Bacteria → Proteobacteria1705Open in IMG/M
3300013307|Ga0157372_12087485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium651Open in IMG/M
3300014268|Ga0075309_1189532All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria540Open in IMG/M
3300014326|Ga0157380_10289502All Organisms → cellular organisms → Bacteria1503Open in IMG/M
3300014745|Ga0157377_11452855All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium543Open in IMG/M
3300014969|Ga0157376_11769631Not Available654Open in IMG/M
3300014969|Ga0157376_12320058Not Available576Open in IMG/M
3300015077|Ga0173483_10058531Not Available1498Open in IMG/M
3300015371|Ga0132258_11752662All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1566Open in IMG/M
3300018017|Ga0187872_10394937All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria586Open in IMG/M
3300018022|Ga0187864_10060799All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Mycoavidus → Mycoavidus cysteinexigens2078Open in IMG/M
3300018057|Ga0187858_10419591All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Mycoavidus → Mycoavidus cysteinexigens829Open in IMG/M
3300018429|Ga0190272_10552161All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium995Open in IMG/M
3300018469|Ga0190270_10287043All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1457Open in IMG/M
3300018469|Ga0190270_10506953All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1152Open in IMG/M
3300018469|Ga0190270_10508471All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1150Open in IMG/M
3300018476|Ga0190274_10412828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1314Open in IMG/M
3300018481|Ga0190271_10986375All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria967Open in IMG/M
3300019487|Ga0187893_10474229All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria824Open in IMG/M
3300020186|Ga0163153_10169578All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1156Open in IMG/M
3300022886|Ga0247746_1191575All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria534Open in IMG/M
3300022915|Ga0247790_10127730Not Available642Open in IMG/M
3300023066|Ga0247793_1022942All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium912Open in IMG/M
3300025904|Ga0207647_10670328All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria567Open in IMG/M
3300025912|Ga0207707_10912947All Organisms → cellular organisms → Bacteria → Terrabacteria group725Open in IMG/M
3300025935|Ga0207709_10508127Not Available941Open in IMG/M
3300025935|Ga0207709_10627382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria854Open in IMG/M
3300025937|Ga0207669_11646897All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria548Open in IMG/M
3300025961|Ga0207712_10322458All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1275Open in IMG/M
3300027568|Ga0208042_1001261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales8211Open in IMG/M
3300027662|Ga0208565_1231399All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria519Open in IMG/M
3300027854|Ga0209517_10032509All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4329Open in IMG/M
3300028802|Ga0307503_10864286All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria521Open in IMG/M
3300028809|Ga0247824_10406788All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium787Open in IMG/M
3300028809|Ga0247824_10909040Not Available551Open in IMG/M
3300030494|Ga0310037_10272690All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria728Open in IMG/M
3300030659|Ga0316363_10285896All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria662Open in IMG/M
3300030707|Ga0310038_10066905All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1967Open in IMG/M
3300031562|Ga0310886_10331178Not Available879Open in IMG/M
3300031708|Ga0310686_110241547All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria933Open in IMG/M
3300031949|Ga0214473_10808954All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1009Open in IMG/M
3300032000|Ga0310903_10090459Not Available1281Open in IMG/M
3300032003|Ga0310897_10509404All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria585Open in IMG/M
3300032017|Ga0310899_10064923Not Available1382Open in IMG/M
3300032075|Ga0310890_11376320All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria579Open in IMG/M
3300032160|Ga0311301_10059440All Organisms → cellular organisms → Bacteria8404Open in IMG/M
3300032160|Ga0311301_10132367All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4624Open in IMG/M
3300033551|Ga0247830_10053709All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2657Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil17.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil7.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere6.67%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.71%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.81%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.86%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.86%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.86%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.90%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.90%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.95%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.95%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.95%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.95%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.95%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.95%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.95%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014268Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018017Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40EnvironmentalOpen in IMG/M
3300018022Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300020186Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1EnvironmentalOpen in IMG/M
3300022886Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5EnvironmentalOpen in IMG/M
3300022915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4EnvironmentalOpen in IMG/M
3300023066Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027568Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027662Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_062234122228664021SoilVKIDTCRECKQPLVEIDNRGDHLTGCMTCNIWWSAEGDKIRLSEEDLRALHALRRET
ICChiseqgaiiDRAFT_086379243300000033SoilVKIDTCRECKQPLVEIDNRGDHLTGCMTCNIWWSAEGDKIRLSEEDLRALHALRREP*
JGI12270J11330_10000737143300000567Peatlands SoilMTEESTVSYCFECKGPLTAIDNYGKRLTGCMTCNIWWSLDGAKVRLPEEDLRALHKLRRD
JGI12270J11330_10001107133300000567Peatlands SoilMSDESTVSYCFECKQPLVEIDNYGRRLTGCLTCNIWWSRYGTDKVRLPEEDLRALHEQRRG*
JGI12270J11330_10001114143300000567Peatlands SoilMTDQRTVTYCFECKGPLTAIDNYGQRLTGCMTCNIWWSLSGAKVRLSEEDLRALHQMMRHQGD*
JGI11643J11755_1157403833300000787SoilVKIDTCRECKQPLVEIDNRGDHLTGCMTCNIWWSAEGDKIRLSEEDLRALHALRRET*
Ga0062593_10247849723300004114SoilVKLDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLSEEDLRALHALRRET*
Ga0062590_10012960723300004157SoilMTEATNYCFECKQPLVEIDDRRRHLTGCMTCNIWWSADDEKIRLSEEDLAVLHGLRRK*
Ga0063356_10237074013300004463Arabidopsis Thaliana RhizosphereMSDACRECKQPVVEIDNRGKQLTGCMTCNIWWSIEGEKVRLSEVDLRALHVMRRG*
Ga0069718_1376504123300004481SedimentMTEESAKSLCFECKRPLVEIDNRGRRLTGCMTCNIWWSADDKKIRLSEEDLRALHAMRRA
Ga0062594_10049292833300005093SoilTGMTEATNYCFECKQPLVEIDDRRRHLTGCMTCNIWWSADDEKIRLSEEDLAVLHGLRRK
Ga0066809_1017016223300005168SoilMTEATNYCFECKQPLVEIDDRRRHLTGCMTCNIWWSAEGKKIRLSEEDLRALHALRRET*
Ga0070690_10062682833300005330Switchgrass RhizosphereSDEGRASYCFECKQALTEIDNDGTRLWGCMNCNIWWSLRGAKVRLSEEDLRALHQLRRGN
Ga0068869_10188002013300005334Miscanthus RhizosphereMTACRECKQPLAEIDNRGRRLTGCMTCNIWWSADDKKVRLSEEDLRALHALRR*
Ga0070680_10070457213300005336Corn RhizosphereAMTACRECKQPLAEIDNRGRRLTGCMTCNIWWSADDKKVRLSEEDLRALHALRR*
Ga0070674_10076850513300005356Miscanthus RhizosphereMTDHCRECRRPLMKIDKRGKHLTGCMTCIIWWTGDEKKVRLSEEDLRALHGLRKR*
Ga0070667_10055337513300005367Switchgrass RhizosphereMTACRECKQPLAEIDNRGRCLTGYMTCNIWWSADDKKVRLSEEDLRALHALRR*
Ga0070667_10084087013300005367Switchgrass RhizosphereMIEYCRECKQPLIEIDNRGQLLKGCATCNLWWPIGGGMGIKLSEEDLAALHALRRR*
Ga0070701_1054282913300005438Corn, Switchgrass And Miscanthus RhizosphereVIDDGRECKQPLVEIDNRGEHLTGCMICNIWWSAEGEKARLSEEDLRALHAMRRL*
Ga0070694_10087824123300005444Corn, Switchgrass And Miscanthus RhizosphereSAGVSQGSGHCSVKLDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLPEEDLRALHALRRET*
Ga0068867_10055611923300005459Miscanthus RhizosphereMTDATNYCFECKQPLVEIDDRRRHLTGCMTCNIWWSADDEKIRLSEEDLAVLH
Ga0070704_10032691813300005549Corn, Switchgrass And Miscanthus RhizosphereMTACRECKQPLAEIDNRGRRLTGCMTCNIWWSADDRKVRLSEEDLGALHALRRA*
Ga0066903_10141444033300005764Tropical Forest SoilMGQSMLCRECKQPLIEIDNRGQRLSGCLTCNIWWTSDDQKVRLSEEDVAALHARRGGECKKD
Ga0066903_10250329923300005764Tropical Forest SoilMGQSMLCHECKQPLIEIDNRGQQLSGCLTCNIWWTADGGKVRLSEEDVAALHTLRRG*
Ga0068860_10268892023300005843Switchgrass RhizosphereVIDDCRECKQPLVEIDNRGEHLTGCMICNIWWSAEGEKARLSEEDLRALHAMRRL*
Ga0075026_10085346923300006057WatershedsMSDESTVIYCFECKRPLMEIDNYGERLRGCLTCNIWWSPSGAKVRLPEEDLRALHKLRRNEPNAGS*
Ga0075017_10065862623300006059WatershedsFECKRPLTEIDNYGERLRGCLTCNIWWSPSGAKVRLPEEDLRALHKLRRNEPNAGS*
Ga0075030_10160296313300006162WatershedsTVSYCFECKGPLTAIDNYGQRLTGCMTCNIWWSLGGAKVRLPEEDLRALHKLRRNEPNAGS*
Ga0075014_10022316623300006174WatershedsMSDESTVTYCFECKRPLTEIENYGERLRGCLTCNIWWSPSGAKVRLPEEDLRALHKLRRNEPNAGS*
Ga0075429_10100711413300006880Populus RhizosphereVKIDTCRECKQPLVEIDNRGDHLTGCMTCNIWWSAEGDKIRLSEEDLRAL
Ga0075419_1089485123300006969Populus RhizosphereECKQQLVEIDNRGDHLTGCMTCNIWWSAEGDKIRLSEEDLRALHALRRET*
Ga0105106_1065558023300009078Freshwater SedimentVKLDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGDKIRLSEEDLRALHALRRET*
Ga0111539_1058428223300009094Populus RhizosphereVKLDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLSEEDLRALDALRRET*
Ga0111539_1131481223300009094Populus RhizosphereMPANCTECNQPLVEIDNRGVRLTGCMTCNIWLSEDDEKVRLSEEDLHALQTLFHGGFR*
Ga0105245_1130155623300009098Miscanthus RhizosphereMDECLECKQPVVEIDNRGERLTGCITCNIWWSDDDEKVRLSEEDLHELQTLFHGGFR*
Ga0075418_1052019843300009100Populus RhizosphereVKIDTCRECKQPLVEIDNRGDHLTGCMTCNIWWSADEEKVRLSEEDLAALHELQRN
Ga0105243_1065758613300009148Miscanthus RhizosphereMTDATNYCFECKQPLVEIDDRRRHLTGCMTCNIWWSADDEKIRLSEEDLAVLHGLRRK*
Ga0105243_1188780213300009148Miscanthus RhizosphereMTETCTECKQQLLEIDNRGQHLCGCLTCNIWWSDDEEKVRLSEEDLAALHALRMK*
Ga0111538_1152630623300009156Populus RhizosphereMPANCTECKQPLVEIDNRGVRLTGCMTCNIWLSEDDEKVRLSEEDLHALQTLFHGGFR*
Ga0105100_1094251523300009166Freshwater SedimentVKIETCRECQQPLVEIDNRGDHFTGCMTCNIWWSAEGDKIRLSEEDLRALHALRREA*
Ga0105104_1017568213300009168Freshwater SedimentMDDCRECKQPLVEIDNRGTRLTGCMTCNIWWSVDDKKVRLSEEDLAALHALR*
Ga0116222_130745123300009521Peatlands SoilMSDESTVSYCFECKRPLVEIDNYGRRLKGCLTCNIWWSLSGDHKVRLPEEDLRALHLLR
Ga0116218_153941413300009522Peatlands SoilMSDESTVSYCFECKRPLVEIDNYGRRLKGCLTCNIWWSLSGDHKVRLPEE
Ga0116225_101463333300009524Peatlands SoilMSDENTVSYCFECKQPLVEIDNYGRRLKGCLTCNIWWSVRGDVKVRLPEEDLRALHKLRRE*
Ga0105237_1236767413300009545Corn RhizosphereGPRHGSVMSDACRECKQPVVEIDNRGKQLTGCMTCNIWWSIEGEKVRLSEVDLRALHVMRRG*
Ga0116216_1034022223300009698Peatlands SoilMTEESTVSYCFECKGPLTAIDNYGKRLTGCMTCNIWWSLDGAKVRLPEEDLRALHKLRR
Ga0116219_1004388753300009824Peatlands SoilMSDENTASYCFECKQPLVEIDNYGRRLKGCLTCNIWWSVRGDVKVRLPEEDLRALHKLRRE*
Ga0116219_1009889313300009824Peatlands SoilMSDEGTVSYCFECKQPLVEIDNYGRRLTACLTCNIWWSLSGTDKVRLPEEDLRALHKLRRNHE*
Ga0136449_10009584633300010379Peatlands SoilMSDESTVSYCFECKRPLVEIDNYGRRLKGCLTCNIWWSLSGDRKVRLPEEDLRALHKLRRE*
Ga0105246_1165583113300011119Miscanthus RhizosphereGMTEATNYCFECKQPLVEIDDRRRHPTGCMTCNIWWSADDEKIRLSEEDLAVLHGLRRK*
Ga0105246_1252096623300011119Miscanthus RhizosphereMDDCLECKQPLVEIDNGGERLTGCIACNIWWSDDDEKVRLSEEDLHALQTLRHGGFR*
Ga0153915_1164274913300012931Freshwater WetlandsMTGHCRECKQPLVEIDNRSKRLAGCMTCNIWWSADDKKIRLSEEDLRALHAMRRK*
Ga0164300_1020652033300012951SoilCRECKQPLAEIDNRGRRLTGCMTCNIWWSADDKNVRLSEEDLRALHALRR*
Ga0164303_1098424013300012957SoilMSHERSASYCIECKQPLTEIDNRGKRLRGCMNCNIGWSLTDAKVRLSEEDLRALHALR
Ga0164302_1017920013300012961SoilTDHCRECKQFLVEIDNRGTRLTGCLTCNIWWSAEGTNVRLSEEDLRALHGLRHRK*
Ga0157307_106486523300013096SoilMSDACRECKQPVVEIDNRGKQLTGCMTCNIWWSIEGEKVRLSEVDLRALHV
Ga0163162_1031212933300013306Switchgrass RhizosphereMTEATNYCFECKQPLVEIDDRRRHLTGCMTCNIWWSADDEKIRLSEEDLAVLHAL
Ga0157372_1208748523300013307Corn RhizosphereKLDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLSEEDLRALHALRRET*
Ga0075309_118953223300014268Natural And Restored WetlandsVKSDTCRECKQPLVEIDNRGNHFTGCMTCNIWWSAEGEKIRLSEEDLRALHALRRET*
Ga0157380_1028950233300014326Switchgrass RhizosphereECKQPLVEIDDRRRHLTGCMTCNIWWSADDEKIRLSEEDLAVLHGLRRK*
Ga0157377_1145285513300014745Miscanthus RhizosphereMPATCRECKQPLVEIDNRSKRLTGCMTCNIWWSAEGKKIRLSEEDLRALHALRRET*
Ga0157376_1176963123300014969Miscanthus RhizosphereCKQPLVEIDDRRRHLTGCMTCNIWWSADDEKIRLSEEDLAVLHGLRRK*
Ga0157376_1232005813300014969Miscanthus RhizosphereVAKLTDTCRECKQAVMEIDNRCQPLTGCLTCNIWWSPDGKKVRLSEEDLAALHELRRHERG*
Ga0173483_1005853153300015077SoilVKLDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLSEEDLRAL
Ga0132258_1175266233300015371Arabidopsis RhizosphereMSGACRECKHPIVEIDNRGTRLTGCMTCNIWWSADDKKVRLSEEDLRALHGLSRQA*
Ga0187872_1039493723300018017PeatlandVSYCFECKQPLVEIDNYGKRLTGCLTCNIWWSLNGTDKVRLPEEDLRALRLLRRG
Ga0187864_1006079923300018022PeatlandMSDESTVSYCFECKQPLVEIDNYGKRLTGCLTCNIWWSESGAKVRLPEEDLRALHELRRG
Ga0187858_1041959123300018057PeatlandMSDESTVSYCFECKQPLVEIDNYGKRLTGCLTCNIWWSESGAKVRLPEEDLLALHELRRG
Ga0190272_1055216123300018429SoilSVKIDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLSEEDLRALHALRRET
Ga0190270_1028704323300018469SoilMDDCLECKQPLVEIDNRGVHLIGCMTCNIWWSGDDEKVRLSEEDLHALQTLRHGGFR
Ga0190270_1050695323300018469SoilVKIDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLSEEDLRALHALRRET
Ga0190270_1050847123300018469SoilMADTCRECKQPLVEIDNRGKRLTGCMTCNIWWSSDDKKVRLSEDDLAALHELRRKR
Ga0190270_1182404613300018469SoilMQQPLVEIDKRRRHLTGCMTCNIWWSADDKKVRLSEDDLAALHELRRN
Ga0190274_1041282833300018476SoilMADTCHECKQPLVEIDNRGKRLTGCMTCNIWWSADDKKVRLSEEDMAALYALRRKR
Ga0190271_1098637523300018481SoilVKLDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLSEEDLRALHGLRGSETGVKPYRPGA
Ga0187893_1047422933300019487Microbial Mat On RocksADTCRECKQPLVEIDNRDQHLTGCITCNIWWTTDGKKVRLSEEDLRALHAVRRG
Ga0163153_1016957813300020186Freshwater Microbial MatVKIDTCRECKQPLVEIDNRGDHFTGCMICNIWWSAEGKKIRLSEEDLRALHAL
Ga0247746_119157513300022886SoilVKLDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLSEEDLRALHALRRET
Ga0247790_1012773013300022915SoilMTEATNYCFECKQPLVEIDDRRRHLTGCMTCNIWWSADDEKIRLSEEDLAVLHGLRRK
Ga0247793_102294213300023066SoilSGHCSVKLDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLSEEDLRALHALRRET
Ga0207647_1067032823300025904Corn RhizosphereVKLDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLSEEDLRALHALRR
Ga0207707_1091294723300025912Corn RhizosphereHGSVMSDACRECKQPVVEIDNRGKQLTRCMTCNIWWSIEGEKVRLSEVDLRALHVMRRG
Ga0207709_1050812713300025935Miscanthus RhizosphereMTDATNYCFECKQPLVEIDDRRRHLTGCMTCNIWWSADDEKIRLSEEDLAVLHGLRRK
Ga0207709_1062738213300025935Miscanthus RhizosphereMTETCTECKQQLLEIDNRGQHLCGCLTCNIWWSDGEEKVRLSEEDLAALHALRMK
Ga0207669_1164689723300025937Miscanthus RhizosphereVKLDTCRECKQPLAEIDNRGRCLTGCMTCNIWWSADDKKVRLSEEDLRALHALRR
Ga0207712_1032245813300025961Switchgrass RhizosphereCSVKLDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLSEEDLRALHALRR
Ga0208042_100126123300027568Peatlands SoilMSDESTVSYCFECKQPLVEIDNYGRRLTGCLTCNIWWSRYGTDKVRLPEEDLRALHEQRR
Ga0208565_123139913300027662Peatlands SoilMTDQRTVTYCFECKGPLTAIDNYGQRLTGCMTCNIWWSLSGAKVRLSEEDLRALSSNDAT
Ga0209517_1003250973300027854Peatlands SoilMSDENTASYCFECKQPLVEIDNYGRRLKGCLTCNIWWSVRGDVKVRLPEEDLRALHKLRR
Ga0307503_1086428613300028802SoilMDDCLECKQPLVEIDNGGVRLTGCMSCNIWLSDDGEKLRLSEEELHALQTLFHGGFR
Ga0247824_1040678813300028809SoilSQGSGHCSVKIDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGKKIRLSEEDLRALHALRRET
Ga0247824_1090904013300028809SoilSVMCDTCRECKGPFIEIDNRRRHLTGCLTCNIWWSDEGAKVRLSEEDLAALHTTRRA
Ga0310037_1027269023300030494Peatlands SoilMTEESTVSYCFECKGPLTAIDNYGKRLTGCMTCNIWWSLDGAKVRLPEEDLRALHKL
Ga0316363_1028589613300030659Peatlands SoilMSDEGTVSYCFECKQPLVEIDNYGRRLTACLTCNIWWSLSGTDKVRLPEEDLRALHKLRRNHE
Ga0310038_1006690543300030707Peatlands SoilMSDESTVSYCFECKGPLVEIDNYGRRLKGCLTCNIWWSLSGDHKVRLPEEDLRALHKLRR
Ga0310886_1033117813300031562SoilMTEATNYCFECKQPLVEIDDRRRHLTGCMTCNIWWSADDEKIRLSEEDLAALHALRR
Ga0310686_11024154713300031708SoilMTDDDEIACCNQCKQALTEIDCYGKRLTGCMTCNIWWSLDGAKVRLPEEDLRALHGLKRRKE
Ga0214473_1080895423300031949SoilVKIDTCRECKQPLVEIDNRGDHFTGCMTCNIWWSAEGRKIRLSEEDLRALHALRRES
Ga0310903_1009045923300032000SoilMTEATNYCFECKQPLVEIDDRRRHLTGCMTCNIWWSADDEKIRLSEEDLAALHALRRK
Ga0310897_1050940413300032003SoilMDECLECKQPVVEIDNRGERLTGCITCNIWWSDDDEKVRLSEEDLHALQTLRHG
Ga0310899_1006492313300032017SoilMTEATNYCFECKQPLVEIDDRRRHLTGCMTCNIWWSADDEKIRLSEEDLAALHGLRRK
Ga0310890_1137632013300032075SoilMSDACRECKQPVVEIDNRGKQLTGCMTCNIWWSIEGEKVRLSEVDLRALHVMRRG
Ga0311301_1005944073300032160Peatlands SoilMSDESTVSYCFECKRPLVEIDNYGRRLKGCLTCNIWWSLSGDRKVRLPEEDLRALHKLRR
Ga0311301_1013236783300032160Peatlands SoilMSDENTVSYCFECKQPLVEIDNYGRRLKGCLTCNIWWSVRGDVKVRLPEEDLRALHKLRR
Ga0247830_1005370923300033551SoilMSDTCRECKRPVVEIDNRGQRLTGCMTCNIWWAEDQKVNLSEEHLRALHYMRHG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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