NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F095899

Metagenome / Metatranscriptome Family F095899

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095899
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 102 residues
Representative Sequence MIVRFMGPRLAVGLFAAGLFLLTAASAWAFSRETVLPDGGNYSFGDPDKQPTTSDNHSSSQGTRPFGSSGPVVQFGVQQGPTFGQSNRYNTPDPYYRSLKGN
Number of Associated Samples 74
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 63.81 %
% of genes near scaffold ends (potentially truncated) 37.14 %
% of genes from short scaffolds (< 2000 bps) 78.10 %
Associated GOLD sequencing projects 67
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (66.667 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(22.857 % of family members)
Environment Ontology (ENVO) Unclassified
(41.905 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.238 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130
1JGI12627J18819_101505712
2Ga0066388_1002607594
3Ga0066388_1039148752
4Ga0066388_1044987831
5Ga0066388_1048308722
6Ga0066388_1056626871
7Ga0066903_1000758301
8Ga0066903_1004071733
9Ga0066903_1027274851
10Ga0066903_1064520041
11Ga0070717_114617121
12Ga0075023_1001995921
13Ga0075017_1000888606
14Ga0075019_101323422
15Ga0075015_1001644014
16Ga0075015_1002119731
17Ga0075015_1005266281
18Ga0075014_1003080632
19Ga0079222_100198253
20Ga0126374_100446042
21Ga0126384_111213583
22Ga0126384_111320902
23Ga0126384_124829141
24Ga0126373_100499496
25Ga0126373_101035575
26Ga0126373_105288463
27Ga0126370_109072151
28Ga0126376_103824012
29Ga0126376_104735342
30Ga0126372_109260941
31Ga0126372_109340253
32Ga0126378_100573001
33Ga0126378_110101813
34Ga0126378_116029351
35Ga0126379_108776162
36Ga0126379_130731362
37Ga0126383_100193072
38Ga0126383_102063031
39Ga0153928_10499043
40Ga0126375_107785652
41Ga0182041_122765621
42Ga0182035_100081902
43Ga0182037_110242111
44Ga0182038_106472711
45Ga0182038_113556342
46Ga0187802_100011506
47Ga0187820_10002658
48Ga0187824_101139581
49Ga0187806_11686031
50Ga0187814_100144055
51Ga0187801_101242421
52Ga0187819_103780791
53Ga0187817_100003207
54Ga0187777_102082402
55Ga0187777_109830471
56Ga0187774_110903991
57Ga0210403_102502291
58Ga0126371_100861325
59Ga0126371_101472044
60Ga0126371_103419382
61Ga0126371_113537382
62Ga0242662_101282621
63Ga0207722_10257752
64Ga0209325_10039683
65Ga0208860_10311221
66Ga0209731_10839541
67Ga0207826_10125811
68Ga0207826_10544373
69Ga0207862_12514651
70Ga0209067_101581872
71Ga0209583_101164352
72Ga0209698_107836991
73Ga0170834_1091247183
74Ga0170823_168632481
75Ga0170824_1243413411
76Ga0170824_1245758223
77Ga0170818_1062149551
78Ga0318516_101231011
79Ga0318516_101802621
80Ga0318528_100937364
81Ga0310915_101581762
82Ga0310915_109582951
83Ga0318574_107148361
84Ga0307476_104254493
85Ga0318492_105705821
86Ga0318494_108682312
87Ga0318494_109465661
88Ga0318537_100510951
89Ga0318509_103445542
90Ga0318498_101044874
91Ga0306925_114180892
92Ga0306925_115067841
93Ga0318551_101529322
94Ga0306923_113841452
95Ga0310916_101712911
96Ga0306926_1001612618
97Ga0307479_102930524
98Ga0306922_102528411
99Ga0318558_103270243
100Ga0318533_109518881
101Ga0306924_101848391
102Ga0335081_100355014
103Ga0310914_100005461
104Ga0310914_112844832
105Ga0318519_100047482
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 19.23%    β-sheet: 0.00%    Coil/Unstructured: 80.77%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100MIVRFMGPRLAVGLFAAGLFLLTAASAWAFSRETVLPDGGNYSFGDPDKQPTTSDNHSSSQGTRPFGSSGPVVQFGVQQGPTFGQSNRYNTPDPYYRSLKGNSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered RegionsSignal Peptide
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
33.3%66.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Watersheds
Tropical Forest Soil
Agricultural Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Tropical Peatland
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Attine Ant Fungus Gardens
7.6%9.5%22.9%20.0%4.8%10.5%2.9%12.4%3.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12627J18819_1015057123300001867Forest SoilMIVRFKGPRLAAGLFAASLVLLTAASAWAFSRETVSPDGGNYSFGDPDKQPTTSDGKSSSQGTKPFGSSGPVVQFGVQQGGTFGQSNRYTTPDPYFRSLQNGN*
Ga0066388_10026075943300005332Tropical Forest SoilMVRGMGHTMRHTLSICFVAAGISLITAASASAFTRENVSPDGGNYSFDDPNQKSTTADPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPDPYFRPLTNGN*
Ga0066388_10391487523300005332Tropical Forest SoilMIVRWMAPRLAIGMFAAARVLLGDASAWAFSRENVLPDGGNYSFGDPDKQPTISDNQSSSQGAHPVVQFGVQQGTMSSFGQSKNYNTPDPYYQPLLKGN*
Ga0066388_10449878313300005332Tropical Forest SoilMIKRFMGPMVAVGLFAAGLFLLTAASAWAFSRETVSPDGGNYSFGDPDKQPTTSNNNSSSQSTRPFGSSGPVVQFGVHQGSTGTFGQSNRYETPDPYFRSLKGN*
Ga0066388_10483087223300005332Tropical Forest SoilMRSRVAVGSLAASLVLLTAASAWAFSRENVLPDGGNYSFGDPDKQPTTSDSHSSSQSTRPFGSSGPVVQFGVQQGTGFGQSNRYNTPDPYYRSLLKGN*
Ga0066388_10566268713300005332Tropical Forest SoilMIRLGLFAAGMLSLAVTSASAFTQSPDSGNYQFGDPNQKITTPHIQNSDSQGTQPFGSSGPTLQFGVQQGPLSTVGQGTRHNTPDPNFQPLTNGK*
Ga0066903_10007583013300005764Tropical Forest SoilMQSMRSRVAVGSLAASLVLLTAASAWAFSRENVLPDGGNYSFGDPDKQPTTSDSHSSSQSTRPFGSSGPVVQFGVQQGTGFGQSNRYNTPDPYYRSLLKGN*
Ga0066903_10040717333300005764Tropical Forest SoilMIVRWMAPRLAIGISAAALVLFSVASAWAFSRENLSPDGGNYSFGDPDKQPTTSDNQNSSQGARPFGSNPVVQFGVQQGPVSSFGQSRGYKPPDPYYQPLLKGN*
Ga0066903_10272748513300005764Tropical Forest SoilMIVRGMGHTMRHTLSIYFVAAGISLITAASAWAFTRENVSPDGGNYSFDDPNQKSTTTDPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPDPYFRPLTNGN*
Ga0066903_10645200413300005764Tropical Forest SoilMLRRIGPKLTLVLFAAGISLSAGSAWAFTRENVLPDGGNYSFDDPDKRPTKSDNSSDGQSSRPFGSNGPVVQFGVRQGPVSTFGQSNRYGTPDPYFQPLNGK*
Ga0070717_1146171213300006028Corn, Switchgrass And Miscanthus RhizosphereMIVRFKGPRLAVGLFAASLVLLTAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDGKSSSQGTKPFGSSGPVVQFGVQQGGTFGQSNRYTTPDPYF
Ga0075023_10019959213300006041WatershedsMIVRFKGPRLAAGLFAASLVLLTAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDGKSSSQGTKPFGSSGPVVQFGVQKGGTFGQSNRYTTPDPYFR
Ga0075017_10008886063300006059WatershedsMIVRFMGPRLAVGLFAAGLFLLTAASAWAFSRETVFPDGGNYSFGDPDKQPTTSDNHSSSQGSRPFGSSGPVVQFGVQQGPTFGQSNRYNTPDPYYRSLKGN*
Ga0075019_1013234223300006086WatershedsMIVRFMGPRLAVGLFAAGLFLLTAASAWAFSRETVLPDGGNYSFGDPDKQPTTSDNHSSSQGTRPFGSSGPVVQFGVQQGPTFGQSNRYNTPDPYYRSLKGN*
Ga0075015_10016440143300006102WatershedsMIIRFMGPRLAVGLFAAGLFLLTAASAWAFSRETVFPDGGNYSFGDPDKQPTTSDNHSSSQGSRPFGSSGPVVQFGVQQGPTFGQSN
Ga0075015_10021197313300006102WatershedsGLFAAGLFLLTAASAWAFSRETVLPDGGNYSFGDPDKQPTTSDNHSSSQGTRPFGSSGPVVQFGVQQGPTFGQSNRYNTPDPYYRSLKGN*
Ga0075015_10052662813300006102WatershedsTMKIRMMQTRLAVSLFAAGIFLLTAASAWAFSRENVLPDGGNYSFGDPDKQPTTPDNHTSSQSARPFGSSGPVVQFGVQQGGTFGQSNRYTTPDPYFRSLQNGN*
Ga0075014_10030806323300006174WatershedsMIVRFKGPRLAAGLFAASLVLLTAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDGKSSSQGTKPFGSSGPVVQFGVQQGGTFGQSNRYTTPDPYFRSLQNGN*
Ga0079222_1001982533300006755Agricultural SoilMIMQFVGPRAAVGLFAAGLFLLTGASAWAFSRENVSPDGGNYSFGDPDKPPTTSNNNSSSQGTRPFGSSGPVVQFGVQQGSTSTFGQSNRYDTPDPYFRSLKGN*
Ga0126374_1004460423300009792Tropical Forest SoilMTNRIVGRTLAFGLFATSLFLLSAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDNHSSSQGTRPFGSSGPVVQFGIQQGPASTFGQRDRYNTPDPYFRSLQNGN*
Ga0126384_1112135833300010046Tropical Forest SoilVLFSVASAWAFSRENLSPDGGNYSFGDQDKQPTTSDNQNSGQGARPFGSNPVVQFGVQQGPMSSFGQGRAYNPPDPYYQPLLKGN*
Ga0126384_1113209023300010046Tropical Forest SoilMAPRLAIGISAAALVLFSVASAWAFSRENLSPDGGNYSFGDPDKQPTTSDNQNSGQGARPFGSNPVVQFGVQQGPVSSFGQSRGYKPPDPYYQPLLKGN*
Ga0126384_1248291413300010046Tropical Forest SoilNRIVGRTLAFGLFATSLFLRSAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDNHSSSQGTRPFGSSGPVVQFGIQQGPASTFGQRDRYNTPDPYFRSLQNGN*
Ga0126373_1004994963300010048Tropical Forest SoilMMVRGMGHTMRHTLSICFVAAGISLITAASAWAFTRENVSPDGGNYSFDDPNQKSTTADPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPDPYFRPLTNGN*
Ga0126373_1010355753300010048Tropical Forest SoilMTNRIVGRTPAFGLFATSLFLLSAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDNHSSSQGTRPFGSSGPVVQFGIQQGPASTFGQRDRYNTPDPYFRSLQNGN*
Ga0126373_1052884633300010048Tropical Forest SoilMLRYRLGFGLFAAGILLSSGASAWAFSQQIVSPNGGNYSFGDPDKQPTTSDNNSSSQGAKPFGSNGPVMQFGIQQGPMSTFGQSNRYNTPDPYYRSLQNGN*
Ga0126370_1090721513300010358Tropical Forest SoilYFGGVATMIVRWMTPRLAIGISAAALVLFSVASAWAFSRENLSPDGGNYSFGDPDKQPTTSDNQNSGQGARPFGSNPVVQFGVQQGPMSSFGQGRAYNPPDPYYQPLLKGN*
Ga0126376_1038240123300010359Tropical Forest SoilMGMIRLGLFAAGILSLTATSAWAFSQQIVSPDGGNYSFGDPDKQPTTSDNKSSSQGTRPFGSSGATVQFGVQQGPMSTFGQSNRYNTTPDPYFRSLQNGN*
Ga0126376_1047353423300010359Tropical Forest SoilVLFSVASAWAFSRENLSPDGDNYSFGDPDKQPTNSDNQNSGQGARRFGSNPVVQFGVQQGPMSSFGQGRAYNPPDPYYQPLLKGN*
Ga0126372_1092609413300010360Tropical Forest SoilMIVRGMGHTMRHTLSICFVAAGISLITAASASAFTRENVSPDGGNYSFDDPNQKSTTADPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPDPYFRPLTNGN*
Ga0126372_1093402533300010360Tropical Forest SoilWGFTMLRYRLGFGLFAAGILLSSGASAWAFSQQIVSPNGGNYSFGDPDKQPTTSDNNSSSQGAKPFGSNGPVMQFGIQQGPMSTFGQSNRYNTPDPYYRSLQNGN*
Ga0126378_1005730013300010361Tropical Forest SoilMTPRLAIGISAAALVLFSIASAWAFSRENLSPDGGNYSFGDPDKQPTNSDNQNSGQGARPFGSNPVVQFGVQQGPMSSFGQGRAYNPPDPYYQPLLKGN*
Ga0126378_1101018133300010361Tropical Forest SoilMGHTMRHTLSICFVAAGISLITAASASAFTRENVSPDGGNYSFDDPNQKSTTADPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPDPYFRPLTNGN*
Ga0126378_1160293513300010361Tropical Forest SoilVVGLFAAGIVSLTAVSAWAFTRENVLPDGGNYSFGDPDNKSAGQDNHNAGQGARPFGSNGPVVQFGVQQGPLSTFGQDNRYKTPDPYFGTIKGN*
Ga0126379_1087761623300010366Tropical Forest SoilMTPRLAIGISAAALVLFSVASAWAFSRENLSPDGGNYSFGDPDKQPTTSDNQNSGQGARPFGSNPVVQFGVQQGPMSSFGQGRAYNPPDPYYQPLLKGN*
Ga0126379_1307313623300010366Tropical Forest SoilMTNRIVGRGLALSLFATGLFLLSAASAWAFTRENVSPDGGNYSFGDPDKQPTTSDNHSSSQGTRPFGSSGPVVQFGVQQGPTSTFGQRDRYNTPDPYFRSLQNGN*
Ga0126383_1001930723300010398Tropical Forest SoilMTPRLAIGISAAALVLFSVASAWAFSRENLSPDGDNYSFGDPDKQPTNSDNQNSGQGARPFGSNPVVQFGVQQGPMSSFGQGRAYNPPDPYYQPLLKGN*
Ga0126383_1020630313300010398Tropical Forest SoilMAVGLLAASLVLLTAASAWAFSRENVLPDGGNYSFGDPDKQPTTSDSHSSSQSTRPFGSSGPVVQFGVQQGTGFGQSNRYNTTPDPYFRSLQNGN*
Ga0153928_104990433300012677Attine Ant Fungus GardensMGIMIMQFMGPRAAVGLFAAGLALFTASSAWAFSRETVSPDGGNYSFGDPDKPPTTSNNNSSSQSARPFGSGGPVVQFGVQQGSSAFGQS
Ga0126375_1077856523300012948Tropical Forest SoilMTMQSMRSMAVGLLAASLVLLTAASAWAFSRENVLPDGGNYSFGDPDKQPTTSDNHSSSQSTRPFGSSGPVVQFGVQQGPISTFGQSDRYRTPDPYYRSLQNGN*
Ga0182041_1227656213300016294SoilVVGFELIGGTSREMGMMRLGLFAVGILSLTVSSAWAFSQQIVSPDGGNYSFGDPDKQPATSNNQSSSEATRPFGSSGPVVQFGIQQGPMSTFGRSNGYNSTPDPYFRPLTNGN
Ga0182035_1000819023300016341SoilMLRYRLGFGLFAAGILLSTGASAWAFSQQIVSPNGGNYSFGDPDKQPTTSDNNSSSQGAKPFGSNGPVMQFGIQQGPMSTFGQSNRYNTPDPYYRSLQNGN
Ga0182037_1102421113300016404SoilGRGLALSLFATGLFLLSAASAWAFTRENVSPDGGNYSFGDPDKQTTTSDNHSSSQGTRPFGSSGPVVQFGVQQGPTSTFGQRDRYNTPDPYFRSLQNGN
Ga0182038_1064727113300016445SoilMIMRLVGPRLALGLFAAGVVLFPPASAWAFSRENVLPDGGNYSFGDPDKQPTTSDSHSSSQSTRPFGSSGPTVQFQGPTSTFGQSNRYNTTPDPYFRSLQNGN
Ga0182038_1135563423300016445SoilMRLGLFAAGILSLNVTSAWAFSQQIVSPDGGNYSFGDPDKQPTTSNNQSSSQATRPFGSSGPVVQFGIQQGPMSTFGRSNGYNSTPDPYFRPLTNGN
Ga0187802_1000115063300017822Freshwater SedimentMGPRLAVGLFAAGLFLLTAASAWAFSRETVFPDGGNYSFGDPDKQPTTSDNHSSSQGSRPFGSSGPVVQFGVQQGPTFGQSNRYNTPDPYYRSLKGN
Ga0187820_100026583300017924Freshwater SedimentMIIRFMGPRLAVGLFAAGLFLLTAASAWAFSRETVFPDGGNYSFGDPDKQPTTSDNHSSSQGSRPFGSSGPVVQFGVQQGPTFGQSNRYNTPDPYYRSLKGN
Ga0187824_1011395813300017927Freshwater SedimentMTIRSIGPRLAVGLFAVGLFLLTAASAWAFSRENVLPDGGNYSFSDPDKQPTTSDNQTPSQGARPFGSSGPVVQFGIQQGSGFGQSNRYSTPDPYFRPLNGN
Ga0187806_116860313300017928Freshwater SedimentMGPRLAVGLFAAGLFLLTAASAWAFSRETVFPDGGNYSFGDPDKQPTTSDNHSSSQGSRPFGSSGPVVQFGVQQGPTFGQSNGYNTPDPYYWSLKGN
Ga0187814_1001440553300017932Freshwater SedimentMGPRLAVGLFAAGLFLLTAASAWAFSRETVFPDWGNYSFGDPDKQPTTSDNHSSSQGSRPFGSSGPVVQFGVQQGPTFGQSNRYNTPDPYYRSLKGN
Ga0187801_1012424213300017933Freshwater SedimentMLRYRLAFGLFAAGFLLSTVASAWAFSQQIVSPDGGNYSFGDPDKQSTTSNNNGSSQGARPFGSNGLSVQFGVQQDPLTTFGRGNGYNNSAPDPYYQTLRPGN
Ga0187819_1037807913300017943Freshwater SedimentLRYRLAFGLFAAGFLLSTVASAWAFSQQIVSPDGGNYSFGDPDKQSTTSNNNGSSQGARPFGSNGLSVQFGVQQDPLTTFGRGNGYNNSAPDPYYQTLRPGN
Ga0187817_1000032073300017955Freshwater SedimentMGPRLAVGLFAAGLFLLTAASAWAFSRETVLPDGGNYSFGDPDKQPTTSDNHSSSQGSRPFGSSGPVVQFGVQQGPTFGQSNRYNTPDPYYRSLKGN
Ga0187777_1020824023300017974Tropical PeatlandMTMRFMGPRLAVGAFAAGLVLFTVASAWAFSRENVLPDGGNYSFGDPDKQPTTPDNKSSSPTTRPFGSSGPVVQFGVQQGPITTFGPSNRYNTPDPYFRSLQNGN
Ga0187777_1098304713300017974Tropical PeatlandSLITAASAWAFTRENVSPDGGNYSFDDPNQKSTTTDPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYSTPDPYFRPLTNGN
Ga0187774_1109039913300018089Tropical PeatlandMTMRFMGSRLAIGLFAAGLVLLTAASAWAFSRENVLPDGGNYSFGDPDKQPNTSNNNSSSQGTRPFGSSGPVVQFGIQQGSTSTFGQSNRYDTPDPYYRSLKGN
Ga0210403_1025022913300020580SoilMILRFKGPRLVAGLFAASLILLTAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDGKSSSQGTKPFGSSGPVVQFGVQQGGTFGQSNRYTTPDPYFRSLQNGN
Ga0126371_1008613253300021560Tropical Forest SoilMVRGMGHTMRHTLSICFVAAGISLITAASASAFTRENVSPDGGNYSFDDPNQKSTTTDPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPDPYFRPLTNGN
Ga0126371_1014720443300021560Tropical Forest SoilLITAASASAFTRENVSPDGGNYSFDDPNQRSTTADPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPDPYFRPLTNGN
Ga0126371_1034193823300021560Tropical Forest SoilMTMQSMRSMAVGLLAASLVLLTAASAWAFSRENVLPDGGNYSFGDPDKQPTTSDNHSSSQSTRPFGSSGPVVQFGVQQGPISTFGQSDRYRTPDPYYRSLQNGN
Ga0126371_1135373823300021560Tropical Forest SoilMIVRWMAPRLAIGISAAALVLFSVASAWAFSRENLSPDGGNYSFGDPDKQPTTSDNQNSSQGARPFGSNPVVQFGVQQGPVSSFGQSRGYKPPDPYYQPLLKGN
Ga0242662_1012826213300022533SoilKTMILRFKGPRLVAGLFAASLILLTAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDGKSSSQGTKPFGSSGPVVQFGVQQGGTFGQSNRYTTPDPYFRSLQNGN
Ga0207722_102577523300027003Tropical Forest SoilMTMRFMGPRLAVGAFAAGLVLFTAASAWAFSRENVLPDGGNYSFGDPDKQPTNSDNNSSSQSTRPFGSSGPTVQFQGPTSTFGQSNRYNTTPDPYFRSLQNGN
Ga0209325_100396833300027050Forest SoilMIMQFVGPRAAVGLFAAGLFLLTGASAWAFSRENVSPDGGNYSFGDPDKPPTTSNNNSSSQGTRPFGSSGPVVQFGVQQGSTSTFGQSNRYDTPDPYFRSLKGN
Ga0208860_103112213300027076Forest SoilKTMIVRFKGPRLVAGLFAASLILLTAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDGKSSSQGTKPFGSSGPVVQFGVQQGGTFGQSNRYTTPDPYFRSLQNGN
Ga0209731_108395413300027326Forest SoilMIMQFMGPRAAVGLFAVGLVLFTASSAWAFSRETVSPDGGNYSFGDPDKPPTTSNDNSSSQGAKPFGSSGPVVQFGVQQGSDTFGRSNRYDTPDPYFRSLKGN
Ga0207826_101258113300027680Tropical Forest SoilMIMRLVGPRLALGLFAAGVVLFPPASAWAFTRENVSPDGGNYSFGDPDKQPTNSDNNSSSQSTRPFGSSGPTVQFQGPTSTFGQSNRYNTTPDPYFRSLQNGN
Ga0207826_105443733300027680Tropical Forest SoilMTMRFMGPRLAVGAFAAGLVLFTAASAWAFSRENVLPDGGNYSFGDPDKQPTTSDNKSSSPTTRPFGSSGPVVQFGVQQGPMTTFGPSNRYNTPDPYFRSLQNGN
Ga0207862_125146513300027703Tropical Forest SoilMTMRFMGPRLAVGAFAAGLVLFTAASAWAFSRENVLPDGGNYSFGDPDKQPTTSDNKSSSPSTRPFGSSGPVVQFGVQQGPMTTFGPSNRYNTPDPYFRSLQNGN
Ga0209067_1015818723300027898WatershedsMIVRFMGPRLAVGLFAAGLFLLTAASAWAFSRETVLPDGGNYSFGDPDKQPTTSDNHSSSQGTRPFGSSGPVVQFGVQQGPTFGQSNRYNTPDPYYRSLKGN
Ga0209583_1011643523300027910WatershedsMIVRFKGPRLAAGLFAASLVLLTAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDGKSSSQGTKPFGSSGPVVQFGVQKGGTFGQSNRYTTPDPYFRSLQNGN
Ga0209698_1078369913300027911WatershedsAYNQCFERDGGTMIVRWMELRLAVGLFAAGVFLLTAASAWAFSRENVVPDGGNYSFGDPDKQPTTSDNHSSSQGSRPFGSSGPVVQFGVQQGPTFGQSNRYNTPDPYYRSLKGN
Ga0170834_10912471833300031057Forest SoilMIVRFKGPRLAAGLFAASLVLLTAASAWAFSRENGSPDGGNYSFGDPDKQPTTSDGKSSSQGTKPFGSSGPVVQFGVQQGGTFGQSNRYTTPDPYFRSLQNGN
Ga0170823_1686324813300031128Forest SoilGCVAYNQRLEGDGKTMIVRFKGPRLAVGLFAASLVLLTAASAWAFSRENGSPDGGNYSFGDPDKQPTTSDGKSSSQGTKPFGSSGPVVQFGVQQGGTFGQSNRYTTPDPYFRSLQNGN
Ga0170824_12434134113300031231Forest SoilMILRWMELRLAVGLFATGVFLLTAASAWAFSRENVVPDGGNYSFGDPDKQPTTPDNHTSSQSTRPFGSSGPVVQFGVQQGPLTTFGQGNRYSTPDPYFRPFSNGN
Ga0170824_12457582233300031231Forest SoilMIVRFKGPRLAAGLFAASLVLLTAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDGKSSSQGTKPFGSSGPVVQFGVQQGGTFGQSNRYTTPDPYFRSLQNGN
Ga0170818_10621495513300031474Forest SoilMILRWMELRLAVGLFATGVFLLTAASAWAFSRENVVPDGGNYSFGDPDKQPTTPDNHTSSQSTRPFGSSGPVVQFGVQQGPLTTFGQGNRYSTPDPYFRPFTNGN
Ga0318516_1012310113300031543SoilMLRYRLGFGLFAAGILLSSGASAWAFSQQIVSPNGGNYSFGDPDKQPTTSDNNSSSQGAKPFGSNGPVMQFGIQQGPMSTFGQSNRYNTPDPYYRSLQNGN
Ga0318516_1018026213300031543SoilMTNRIVGRGLALSLFATGLFLLSAASAWAFTRENVSPDGGNYSFGDPDKQPTTSDNHSSSQGTRPFGSSGPVVQFGVQQGPTSTFGQRDRYNTPDPYFRSLQNGN
Ga0318528_1009373643300031561SoilPRGWGFTMLRYRLGFGLFAAGILLSSGASAWAFSQQIVSPNGGNYSFGDPDKQPTTSDNNSSSQGAKPFGSNGPVMQFGIQQGPMSTFGQSNRYNTPDPYYRSLQNGN
Ga0310915_1015817623300031573SoilMLRYRLGFGLFAAGILLSTGASAWAFSQQIVSPNGGNYSFGDPDKQPTTSDNNSSSQGAKPFGSNGPVMQFGIQQGPMSTLGQSNRYNTPDPYYRSLQNGN
Ga0310915_1095829513300031573SoilMMVRGMGHTMRHTLSICFVAAGISLITAASAWAFTRENVSPDGGNYSFDDPNQKSTTTDPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPDPYFRPLNNGN
Ga0318574_1071483613300031680SoilMMVRGMGHTMRHTLSICFVAAGISLITAASAWAFTRENVSPDGGNYSFDDPNQKSTTTDPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPDPYFRPLTNGN
Ga0307476_1042544933300031715Hardwood Forest SoilMIVRFKGPRLAAGLFAASLVLLTAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDGKSSSQGAKPFGSSGPVVQFGVQQGGTFGQSNRYTTPDPYFRSLQNGN
Ga0318492_1057058213300031748SoilMMVRGMGHTMRHTLSICFVAAGISLITAASAWAFTRENVSPDGGNYSFDDPNQKSTTTDPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPDPY
Ga0318494_1086823123300031751SoilYSWEPRGWGFTMLRYRLGFGLFAAGILLSSGASAWAFSQQIVSPNGGNYSFGDPDKQPTTSDNNSSSQGAKPFGSNGPVMQFGIQQGPMSTFGQSNRYNTPDPYYRSLQNGN
Ga0318494_1094656613300031751SoilGGASRGMGMIKLGLFAAGILSLTATSAWAFSQQIVSPDGGNYSFGDPDKQPTTSDNKSSSQGIRPFGSSGPTVQFQGPTSTFGQSNRYNTTPDPYFRSLQNGN
Ga0318537_1005109513300031763SoilMLRYRLGFGLFAAGILLSSGASAWAFSQQIVSPNGGNYSFGDPDKQPTTSDNNSSSQGAKPFGSNGPVMQFGIQQGPMSTFGQSNRYNTPDPYY
Ga0318509_1034455423300031768SoilMMVRGMGHTMRHTLSICFVAAGISLITAASAWAFTRENVSPDGGNYSFDDPNQKSTTTDPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPD
Ga0318498_1010448743300031778SoilDYSWEPRGWGFTMLRYRLGFGLFAAGILLSSGASAWAFSQQIVSPNGGNYSFGDPDKQPTTSDNNSSSQGAKPFGSNGPVMQFGIQQGPMSTFGQSNRYNTPDPYYRSLQNGN
Ga0306925_1141808923300031890SoilAAYNRCFEGDVGAMTNRIVGRRLAFGLFATGLFLLSAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDNHSSSQGTRPFGSSGPVMQFGIQQGPASTFGQRDRYNTPDPYFRSLQNGN
Ga0306925_1150678413300031890SoilVAAGISLITAASAWAFTRENVSPDGGNYSFDDPNQKSTTTDPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPDPYFRPLNNGN
Ga0318551_1015293223300031896SoilMLRYRLGFGLFAAGILLSSGASAWAFSQQIVSPNGGNYSFGDPDKQPTTSDNNSSSQGAKPFGSNGPVMQFGIQQGPISTFGQSNRYNTPDPYYRSLQNGN
Ga0306923_1138414523300031910SoilMRLGLFAVGILSLTVSSAWAFSQQIVSPDGGNYSFGDPDKQPTTSNNQSSSQATRPFGSSGPVVQFGIQQGPMSTFGRSNGYNSTPDPYFRPLTNGN
Ga0310916_1017129113300031942SoilLLSAASAGAFTRENVSPDGGNYSFGDPDKQPTTSDNHSSSQGTRPFGSSGPVVQFGVQQGPTSTFGQRDRYNTPDPYFRSLQNGN
Ga0306926_10016126183300031954SoilMMVRGMGHTMRHTLSICFVAAGISLITAASASAFTRENVSPDGGNYSFDDPNQKSTTTDPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPDPYFRPLNNGN
Ga0307479_1029305243300031962Hardwood Forest SoilGLFAAGLVLFTASSAWAFSRETVSPDGGNYSFGDPDKPPTTSNNNSSSQGARPLGSSGPVVQFGVQQGSSTFGQSNRYDTPDPYYRSLKGN
Ga0306922_1025284113300032001SoilMMVRGMGHTMRHTLSICFVAAGISLITAASAWAFTRENVSPDGGNYSFDDPNQKSTTTDPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRDTPDPYFR
Ga0318558_1032702433300032044SoilMLRYRLGFGLFAAGILLSSGASAWAFSQQIVSPNGGNYSFGDPDKQPTTSDNNSSSQGAKPFGSNGPVMQFGIQQGPMSTFGQSNRYNTPADPYYRSLQNGN
Ga0318533_1095188813300032059SoilMTNRIVGRRLAFGLFATGLFLLSAASAWAFSRENVSPDGGNYSFGDPDKQPTTSDNHSSSQGTRPFGSSGPVMQFGIQQGPASTFGQRDRYNTPDPYFRSLQNGN
Ga0306924_1018483913300032076SoilMIVRGMGHTMRHTLSICFVAAGISLITAASAWAFTRENVSPDGGNYSFDDPNQKSTTTDPHNSSQGTRPFGSSGPVVQFGVQQGPLTTFGQGNRYNTPDPYFRPLTNGN
Ga0335081_1003550143300032892SoilMTIRSIGPRLAVGLFAVGLFLLTAASAWAFSRENVLPDGGNYSFSDPDKQPTTSDNQTPSQGARPFGSSGPVAQFGIQQGSGFGQSNRHSTPDPYFRPLNGN
Ga0310914_1000054613300033289SoilRGWGFTMLRYRLGFGLFAAGILLSSGASAWAFSQQIVSPNGGNYSFGDPDKQPTTSDNNSSSQGAKPFGSNGPVMQFGIQQGPMSTFGQSNRYNTPDPYYRSLQNGN
Ga0310914_1128448323300033289SoilMRLGLFAVGILSLTVSSAWAFSQQIVSPDGGNYSFGDPDKQPTTSNNQSSSQATRPFGSSGPVVQFGIQRGPMSTFGRSNSYNSTPDPYFRPLTNGN
Ga0318519_1000474823300033290SoilMLRYRLGFGLFAAGILLSSGASAWAFSQQIVSPNGGNYSFGDPDKQPTTSDNNSSSQGAKPFGSNGPVMQFGIQQGPMSTFGQSNLYNTPDPYYRSLQNGN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.