Metagenome / Metatranscriptome Family F095890

Basic Information
Family ID	F095890
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	41 residues
Representative Sequence	MRRVLAATAAEFLEFQPLGRRFAVLGRRIIPLFAVTAL
Number of Associated Samples	92
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.95 %
% of genes near scaffold ends (potentially truncated)	48.57 %
% of genes from short scaffolds (< 2000 bps)	92.38 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Most Common Taxonomy
Group	Bacteria (62.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (18.095 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.143 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.03% β-sheet: 0.00% Coil/Unstructured: 46.97%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF03143	GTP_EFTU_D3	38.10
PF03144	GTP_EFTU_D2	19.05
PF00584	SecE	12.38
PF02357	NusG	1.90
PF03946	Ribosomal_L11_N	0.95
PF16320	Ribosomal_L12_N	0.95
PF03631	Virul_fac_BrkB	0.95
PF00687	Ribosomal_L1	0.95
PF02583	Trns_repr_metal	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0690	Preprotein translocase subunit SecE	Intracellular trafficking, secretion, and vesicular transport [U]	12.38
COG2443	Preprotein translocase subunit Sss1	Intracellular trafficking, secretion, and vesicular transport [U]	12.38
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	1.90
COG0080	Ribosomal protein L11	Translation, ribosomal structure and biogenesis [J]	0.95
COG0081	Ribosomal protein L1	Translation, ribosomal structure and biogenesis [J]	0.95
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.95
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	19.05 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.57 %
Tissierellia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia	0.95 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.57 %
Tissierellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales	0.95 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.81 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.95 %
Peptoniphilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae	0.95 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.86 %
unclassified Roseomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas	0.95 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.95 %
Finegoldia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae → Finegoldia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.86 %
Roseomonas sp. TAS13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	0.95 %
Finegoldia magna	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae → Finegoldia → Finegoldia magna	0.95 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001180\|JGI12695J13573_1001290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1861	Open in IMG/M
3300001471\|JGI12712J15308_10181364	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300001593\|JGI12635J15846_10905252	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300003577\|Ga0007416J51690_1083493	Not Available	560	Open in IMG/M
3300005186\|Ga0066676_11033899	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300006174\|Ga0075014_100790851	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300009088\|Ga0099830_11457609	Not Available	570	Open in IMG/M
3300009143\|Ga0099792_10526709	Not Available	744	Open in IMG/M
3300009522\|Ga0116218_1117409	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300009524\|Ga0116225_1020495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3402	Open in IMG/M
3300009698\|Ga0116216_10000011	All Organisms → cellular organisms → Bacteria	221994	Open in IMG/M
3300009824\|Ga0116219_10372139	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300009826\|Ga0123355_10117586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4133	Open in IMG/M
3300009839\|Ga0116223_10155696	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300010046\|Ga0126384_11417197	Not Available	648	Open in IMG/M
3300010046\|Ga0126384_11706372	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300010343\|Ga0074044_11028148	Not Available	540	Open in IMG/M
3300010358\|Ga0126370_10300806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1272	Open in IMG/M
3300010358\|Ga0126370_11452842	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300010361\|Ga0126378_11144480	Not Available	878	Open in IMG/M
3300010361\|Ga0126378_13052879	Not Available	533	Open in IMG/M
3300010376\|Ga0126381_103163396	Not Available	651	Open in IMG/M
3300010398\|Ga0126383_12124670	Not Available	648	Open in IMG/M
3300010398\|Ga0126383_13378116	Not Available	521	Open in IMG/M
3300011038\|Ga0138547_104195	Not Available	590	Open in IMG/M
3300011043\|Ga0138528_106490	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300011063\|Ga0138537_1085987	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300011066\|Ga0138524_1146031	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300011070\|Ga0138567_1032940	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300011071\|Ga0138595_1073034	Not Available	969	Open in IMG/M
3300011072\|Ga0138563_1049272	Not Available	681	Open in IMG/M
3300011073\|Ga0138584_1172545	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300011073\|Ga0138584_1173900	Not Available	820	Open in IMG/M
3300011078\|Ga0138565_1097744	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300011084\|Ga0138562_1034402	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300011088\|Ga0138576_1210737	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300011120\|Ga0150983_10850800	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300011120\|Ga0150983_11891180	Not Available	682	Open in IMG/M
3300011120\|Ga0150983_15292840	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012206\|Ga0137380_10965185	Not Available	730	Open in IMG/M
3300012211\|Ga0137377_11385974	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300012212\|Ga0150985_118292212	Not Available	609	Open in IMG/M
3300012354\|Ga0137366_10513668	Not Available	864	Open in IMG/M
3300012361\|Ga0137360_11580625	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300012971\|Ga0126369_10570118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae → Finegoldia → Finegoldia magna	1199	Open in IMG/M
3300014201\|Ga0181537_10685858	Not Available	697	Open in IMG/M
3300017822\|Ga0187802_10103958	All Organisms → cellular organisms → Bacteria → Acidobacteria	1070	Open in IMG/M
3300017937\|Ga0187809_10166526	Not Available	769	Open in IMG/M
3300017942\|Ga0187808_10616805	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300017955\|Ga0187817_10805306	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300017975\|Ga0187782_10075225	Not Available	2468	Open in IMG/M
3300018013\|Ga0187873_1224791	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300018040\|Ga0187862_10745871	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300018062\|Ga0187784_11249374	Not Available	589	Open in IMG/M
3300018433\|Ga0066667_11461802	Not Available	603	Open in IMG/M
3300019256\|Ga0181508_1288318	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300019786\|Ga0182025_1195098	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	902	Open in IMG/M
3300020078\|Ga0206352_10377794	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300020078\|Ga0206352_10655830	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300021560\|Ga0126371_10125251	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2600	Open in IMG/M
3300021560\|Ga0126371_10437930	All Organisms → cellular organisms → Bacteria → Acidobacteria	1452	Open in IMG/M
3300021860\|Ga0213851_1285730	Not Available	600	Open in IMG/M
3300021860\|Ga0213851_1718421	Not Available	645	Open in IMG/M
3300021861\|Ga0213853_11621112	Not Available	658	Open in IMG/M
3300022502\|Ga0242646_1034800	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300022522\|Ga0242659_1035600	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300023046\|Ga0233356_1052981	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300024331\|Ga0247668_1081213	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	655	Open in IMG/M
3300025898\|Ga0207692_10794773	Not Available	618	Open in IMG/M
3300025915\|Ga0207693_10288889	All Organisms → cellular organisms → Bacteria → Acidobacteria	1285	Open in IMG/M
3300026335\|Ga0209804_1223756	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300026335\|Ga0209804_1340457	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300026868\|Ga0207818_1025876	Not Available	508	Open in IMG/M
3300027168\|Ga0208239_1026550	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300027313\|Ga0207780_1034566	Not Available	890	Open in IMG/M
3300027667\|Ga0209009_1067073	Not Available	901	Open in IMG/M
3300027765\|Ga0209073_10291525	Not Available	644	Open in IMG/M
3300027879\|Ga0209169_10305318	Not Available	836	Open in IMG/M
3300027884\|Ga0209275_10381085	Not Available	793	Open in IMG/M
3300027895\|Ga0209624_11131048	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300028450\|Ga0189898_1012203	Not Available	850	Open in IMG/M
3300028678\|Ga0302165_10246448	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300028906\|Ga0308309_10436699	Not Available	1126	Open in IMG/M
3300029882\|Ga0311368_10458808	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300030058\|Ga0302179_10389591	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300030730\|Ga0307482_1137054	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300030743\|Ga0265461_11673430	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300030776\|Ga0075396_1959044	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300030815\|Ga0265746_1037262	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300030862\|Ga0265753_1119314	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300030873\|Ga0265751_114828	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300031198\|Ga0307500_10049531	All Organisms → cellular organisms → Bacteria → Acidobacteria	1010	Open in IMG/M
3300031753\|Ga0307477_11091635	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300032160\|Ga0311301_11828350	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300032805\|Ga0335078_12469974	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300032828\|Ga0335080_10557374	Not Available	1210	Open in IMG/M
3300032828\|Ga0335080_11086419	Not Available	810	Open in IMG/M
3300032898\|Ga0335072_10283757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1871	Open in IMG/M
3300032898\|Ga0335072_11741725	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300033807\|Ga0314866_010565	Not Available	1223	Open in IMG/M
3300033824\|Ga0334840_126949	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300033828\|Ga0334850_000593	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	19209	Open in IMG/M
3300033887\|Ga0334790_001654	All Organisms → cellular organisms → Bacteria	18405	Open in IMG/M
3300034124\|Ga0370483_0037978	Not Available	1486	Open in IMG/M
3300034199\|Ga0370514_003619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3432	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.14%
Host-Associated	Host-Associated	2.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.71%
Aquatic	Environmental → Aquatic	11.43%
Plants	Host-Associated → Plants	1.90%
Arthropoda	Host-Associated → Arthropoda	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Freshwater	Environmental → Aquatic → Freshwater	10.48%
Peat	Environmental → Terrestrial → Peat	5.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.90%
Sediment	Environmental → Aquatic → Sediment	0.95%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.33%
Loam	Environmental → Terrestrial → Soil → Loam	15.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.71%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.81%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.95%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	18.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.81%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	2.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.86%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.95%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.95%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.95%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001180	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003577	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011038	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 28 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011043	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 6 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011063	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 15 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011066	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 3 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011070	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 52 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011071	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011072	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 48 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011073	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 74 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011078	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011084	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 47 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011088	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022502	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023046	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026868	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 32 (SPAdes)	Environmental	Open in IMG/M
3300027168	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF037 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028450	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300028678	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030776	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030873	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300033828	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12695J13573_10012904	3300001180	Forest Soil	MRRMLAATVAEFLKFQPFRRRLPVLGRRIIAFFAITAL*
JGI12712J15308_101813643	3300001471	Forest Soil	MRRVLAAPVTELLQFQTIRRRFAVLSLRVIPLFAITALQ
JGI12635J15846_109052523	3300001593	Forest Soil	MLAATAAEFLELQPLRRRLPVLGRRIIPLFAITALQRN
Ga0007416J51690_10834932	3300003577	Avena Fatua Rhizosphere	RSSRLFHFFMGGVLTATAAELLEFQPLGRRLTVLRRRIIPLFAVTAL*
Ga0066676_110338993	3300005186	Soil	MRRVLTATVAEFLEFQPLRRRLTVLRRRIIPLFAVTALNVTISRG
Ga0075014_1007908512	3300006174	Watersheds	MAQLFHFFVRRVLAATVAELLEFQPFGRRLPILGRRVVPLFAITAL*
Ga0099830_114576091	3300009088	Vadose Zone Soil	HFFVRRVLAAAATEFFELQPFGRRLPILGGRIIPLFAITAL*
Ga0099792_105267092	3300009143	Vadose Zone Soil	VRRVLAATVTELFEFQPFRRRLPVLGGRIIPLFAITAL*
Ga0116218_11174091	3300009522	Peatlands Soil	FFMRRVLAATAAEFLEFQPLGRRLPILGRRVVPLFAVTAL*
Ga0116225_10204951	3300009524	Peatlands Soil	MRRVLAATAAELFEFQPFGRRFAVLGRRIVPLFAVTAL*
Ga0116216_100000112	3300009698	Peatlands Soil	MLAAAAAEFLELQPLCGRFPVLGGRIIPLFAITAL*
Ga0116219_103721392	3300009824	Peatlands Soil	HFFVRRMLAAAAAEFLELQPLCGRFPVLGGRIIPLFAITAL*
Ga0123355_101175868	3300009826	Termite Gut	MTAGIDSRLGDSNDPTGLFHFFMDSVLAATAAEFLELQPLGRRLAVLRGRIIPLFAITAL
Ga0116223_101556961	3300009839	Peatlands Soil	LLNFFMRRVLAATAAEFLEFQPLGRRLPILGRRIVPLFAVTAL*
Ga0126384_114171972	3300010046	Tropical Forest Soil	FWVRGTGYWLLHFFMRRMLPALAAEFLEFQPFGRRLPIFRRRIIPVFAITAL*
Ga0126384_117063721	3300010046	Tropical Forest Soil	MLAAEAAIFLEFQPLCRFLLILGRNVIAVFAITTLQNN
Ga0074044_110281482	3300010343	Bog Forest Soil	VRRVLAATAAEFLELQPLRGRLPVLGGRVVPLFAITAL*
Ga0126370_103008062	3300010358	Tropical Forest Soil	RLFHFFMGGVLTATAAELFEFQPLGRRFAILRCRIVPLFAVTAL*
Ga0126370_114528421	3300010358	Tropical Forest Soil	MWGVLAATAAEFLEFQPLRGRLPVFRGRVVPLFALTTL*
Ga0126378_111444802	3300010361	Tropical Forest Soil	MGGVLTATAAEFLEFQPLGRRFAVLRRRIVPLFAVTAL*
Ga0126378_130528791	3300010361	Tropical Forest Soil	MGGVLTATAAEFLEFQPLGRRLAVLRRRIVPLFAITAL*
Ga0126381_1031633962	3300010376	Tropical Forest Soil	MGGVLTATPAEFLEFQPLGRRFAVLRRRIIPLFAVTAL*
Ga0126383_121246701	3300010398	Tropical Forest Soil	NLLHFFVRRVLAATAAEFLEFQPLGRRLPVLGRRVIALFAITAL*
Ga0126383_133781161	3300010398	Tropical Forest Soil	MGGVLTATATEFLKFQPLGRRFAVLRCRVVPLFAVTAL*
Ga0138547_1041951	3300011038	Peatlands Soil	LAATAAELLEFQPLGRRFAVLGRRIVPLFAITAL*
Ga0138528_1064902	3300011043	Peatlands Soil	MARWPDLFHFFVRRVLAATVAELLELQPFGRRLPIFGGRVVPLFAVTAL*
Ga0138537_10859872	3300011063	Peatlands Soil	LHFFMRRVLAATAAELLEFQPLGRRLPILGRRVVPLFAVAAL*
Ga0138524_11460312	3300011066	Peatlands Soil	MLAATAAELLEFQPLGRRLPILGRRVVPLFAVTAL*
Ga0138567_10329401	3300011070	Peatlands Soil	MAQLFHFFVRRVLAATVAEFLEFQPFRRRFAVLGRRIVPLFAITAL*
Ga0138595_10730341	3300011071	Peatlands Soil	FFMRRVLAATAAEFLEFQPLGRRLPILGRRIVPLFAVTAL*
Ga0138563_10492722	3300011072	Peatlands Soil	FHFFMRRVLAATAAELFEFQPFGRRFAVLGRRIVPLFAVTAL*
Ga0138584_11725452	3300011073	Peatlands Soil	LNFFMRRVLAATAAEFLEFQPLGRRLPILGRRIVPLFAVTAL*
Ga0138584_11739002	3300011073	Peatlands Soil	RVLAATAAEFLEFQPFRCRLAVLGCRVIAFFAITAL*
Ga0138565_10977441	3300011078	Peatlands Soil	FFVRRVLAATAAEFLELQPLRGRFTVLGGRVVPLFAVTAL*
Ga0138562_10344022	3300011084	Peatlands Soil	VLAATAAEFLEFQPLGRRLPILGRRIVPLFAVTAL*
Ga0138576_12107372	3300011088	Peatlands Soil	MAQLFHFFVRRVLAATVAEFLEFQPFRRRFAVLGRRIVPLFAITTL*
Ga0150983_108508001	3300011120	Forest Soil	MRRVLAATVAEFLEFQPFRRRFAVLGSRIVPLFAITAL*
Ga0150983_118911801	3300011120	Forest Soil	IAQLFHFLVRRVLAATVAEFLELQPFRRRFAVLGRRIIPLFAVTAL*
Ga0150983_152928401	3300011120	Forest Soil	RMLAAAAAEFLELQPFRRRLTVLGRRIIPLFAITAL*
Ga0137380_109651851	3300012206	Vadose Zone Soil	PGTGYCLFHFFVRRVLAATVAKLLEFQPFRRRLPVLGRRIVPLFAVTAL*
Ga0137377_113859741	3300012211	Vadose Zone Soil	FHFFVRRVLAATAAEFLEFEPLGRRFAVLRRRIVTLFAVTAL*
Ga0150985_1182922121	3300012212	Avena Fatua Rhizosphere	GIQPSFHFFVRGVLTATAAEFLELQPLGRRLPVLRRRIIPLFAITAL*
Ga0137366_105136682	3300012354	Vadose Zone Soil	FHFFMRRMLAATAAEFLEFQPLRRRLPILGRRVVPLFAVTAL*
Ga0137360_115806251	3300012361	Vadose Zone Soil	VRGMLTATPAEFLEFQPLGRRFAVLRRRIVPLFAVTAL*
Ga0126369_105701182	3300012971	Tropical Forest Soil	MGGVLPATAAEFLEFQPLGRRFAVLRRRIVPLFAVTAL*
Ga0181537_106858583	3300014201	Bog	RRVLAATAAELLELQPFRRRLAVLGRRIIPLFAITAL*
Ga0187802_101039584	3300017822	Freshwater Sediment	MLAATAAEFLEFQPLGRRFAVLGRRVVPLFAITAL
Ga0187809_101665262	3300017937	Freshwater Sediment	MSGVLTATAAEFFEFQPLGRGLAVLGRRIIPLFAVTAL
Ga0187808_106168051	3300017942	Freshwater Sediment	MARSQISRFSFHFFMRRMLAATAAEFLEFQPLGRRFAVLGRRVVPLFAITAL
Ga0187817_108053061	3300017955	Freshwater Sediment	MAQLFHFLMRRVLAATGAEFLEFQPLGRRLPVLGRRVIPLFAVTAL
Ga0187782_100752255	3300017975	Tropical Peatland	MRRVLAAAAAEFLELQPLGRRLPVLGRRIVPLFAITAL
Ga0187873_12247911	3300018013	Peatland	MRRMLAATAAEFLELQPFRRRLPVLGRRIIPLFAITALQRNN
Ga0187862_107458712	3300018040	Peatland	MRRMLAATVAELFELQPLRRSLPVLGGRIIPLFAITAL
Ga0187784_112493741	3300018062	Tropical Peatland	KLFDLFVRRVLAATTAEFLEFQPLSRRLLVLGGRVVPLFALTTL
Ga0066667_114618022	3300018433	Grasslands Soil	GPDLFHFFVRRVLAALATELVEFQTLGRGLLVLGRRIVPVFAITAL
Ga0181508_12883181	3300019256	Peatland	MRRMLAATSAEFLEFQPLGRRLPILGRRIIPLFAVTAL
Ga0182025_11950981	3300019786	Permafrost	LQNSIQIYFHFFVRRVLAATAAEFFELQPLGRRFPILGRRIIPLFAVTAL
Ga0206352_103777942	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	NCQLLFAVLFHFFMRRMLPATLAELLKFQTPRRGFLVLGRRIVPLFAVAAL
Ga0206352_106558301	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	FWLIANCQLLFAVLLHFFMRRMLPATLAELLKFQTSRRGLLVLGRRIVPLFAVAAL
Ga0126371_101252512	3300021560	Tropical Forest Soil	MGGVLTATAAEFLEFQPLGRRFAVLRRRIVPLFAVTAL
Ga0126371_104379304	3300021560	Tropical Forest Soil	MQLFHFFVGGVLAATAAEFLELQPLSRRLAVLRGRVVPLFAITAL
Ga0213851_12857302	3300021860	Watersheds	MLAATAAELFEFQPLGRRFAVLGRRVVPLFAVTAL
Ga0213851_17184212	3300021860	Watersheds	MGGVLAATAAEFLEFQPLGRRFAVLRCRIVPLFAVTAL
Ga0213853_116211122	3300021861	Watersheds	MLAATAAELLEFQPLGRRFAVLGRRVVPLFAITAL
Ga0242646_10348002	3300022502	Soil	MRRVLAATAAELLELQPLGRRLPIFGRRIVPLFAVTAL
Ga0242659_10356002	3300022522	Soil	AITQLFHFLMRRVLTATVAEFLELQPFRRRFAVLGRRIVPLFAVTAL
Ga0233356_10529812	3300023046	Soil	MLAATATELLKLQPLRRRLPVLGRRIIPLFAITAL
Ga0247668_10812133	3300024331	Soil	MGGVLAATAAELLEFQPLGRRFAVLRRRIVPLFAITAL
Ga0207692_107947731	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	KLQNLFHFFVRGVLTATAAEFFEFQPLGRRLPVLRGRIVPFFAITAL
Ga0207693_102888892	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VGGVLAATAAEFLEFQPLGRRFAVLRRRIIPLFAVTAL
Ga0209804_12237561	3300026335	Soil	VRRVLAATAAEFLEFEPLGRRFAVLRRRIVPLFAVTAL
Ga0209804_13404571	3300026335	Soil	MRRVLTATAAELLELQPLGRRLTVLRCRIVPFFAVTAL
Ga0207818_10258763	3300026868	Tropical Forest Soil	VRGVLAATAAEFLEFQPLGRRLPVFGRRVIAFFAITAL
Ga0208239_10265503	3300027168	Forest Soil	MRRVLPATVAEFLEFQPFRRRFAVLGRRVIPLFAVTAL
Ga0207780_10345662	3300027313	Tropical Forest Soil	PTATTRASVLFNLFVRGVLAATAAEFLEFQPLGRRLPVFGRRVIAFFAITAL
Ga0209009_10670732	3300027667	Forest Soil	MRRVLAATVAELFELQPFRRRLPVLSRRIIPLFAITAL
Ga0209073_102915251	3300027765	Agricultural Soil	MGGVLAATAAEFLEFQPLGRRFAVLRRRIIPLFAVTAL
Ga0209169_103053181	3300027879	Soil	LFDLFVRRMLAATIAELLKLQPFRRRLTVLGRRIIPLFAITAL
Ga0209275_103810852	3300027884	Soil	FPLTQLFHFFVRRVLPATAAEFLELQPLGRRLAVLGRRIVPLFAITAL
Ga0209624_111310481	3300027895	Forest Soil	MAESPDFPDLFHFFMRRVLAAAVAELLELQPLRRRLPVLSRRIIPLFAITAL
Ga0189898_10122031	3300028450	Peatlands Soil	ITQLFHFFVRRVLAATAAEFLEFQPFRCRLAVLGCRVIAFFAITAL
Ga0302165_102464481	3300028678	Fen	VRRVLAAPATELLLLNPVRCRLTILHRRIVPLFAITAL
Ga0308309_104366992	3300028906	Soil	AQDSRLFHFFMRRVLAATAAEFLEFQPLGRRFAVLGRRIVPLFAITAL
Ga0311368_104588082	3300029882	Palsa	MTECFNESMALFHFFVRRVLAATAAELLELQPLGGRLPVLGSRVIPLFAITAL
Ga0302179_103895911	3300030058	Palsa	MALFHFFVRRVLAATAAELLELQPLGGRLPVLGSRVIPLFAITAL
Ga0307482_11370543	3300030730	Hardwood Forest Soil	VRRVLAAAAAEFFEFQPLGRRLAVLRCRIVPLFAVTAL
Ga0265461_116734303	3300030743	Soil	MRRVLAATVAEFLEFQPFRGRFAVLGRRIVPLFAIAAL
Ga0075396_19590441	3300030776	Soil	VLAATAAEFLEFQSLGRRFAVLRRRIVPLFAVTAL
Ga0265746_10372622	3300030815	Soil	MRRVLAATVAELFELQPFGGRFTVLGGRIIALFAITAL
Ga0265753_11193142	3300030862	Soil	MALFHFFVRRVLAATAAELFELQPLRGRLPVLGGRIIPLFAITAL
Ga0265751_1148281	3300030873	Soil	MAQLFHFFVRRVLAATVAEFLEFQALRCRFAVLGRRVVPLFAITAL
Ga0307500_100495311	3300031198	Soil	MRRVLAATAAELFEFQPLGRRFAVLRGRIVPLFAVTAL
Ga0307477_110916352	3300031753	Hardwood Forest Soil	QLFHFFMRRVLAAAAAEFLEFQPLGRRLPILGRRIVPLFAITAL
Ga0311301_118283501	3300032160	Peatlands Soil	MRRVLPAAPAKLFQLQPVRFGFPVLGGRVIPLFAITA
Ga0335078_124699742	3300032805	Soil	VRRMLPATGAELLKLQSLRCRFTVLRRRIIPLFAITAL
Ga0335080_105573742	3300032828	Soil	NWLLNFFVRRVLPATPAEFLEFQPVRRRLAVLGRRVIALFAITAL
Ga0335080_110864192	3300032828	Soil	RGLFNLFMGGVLTATAAEFLEFQPLSRRFAVLRCRIVPLFAITAL
Ga0335072_102837571	3300032898	Soil	LLFNFFVRRVLAATAAEFLELQPLSCRFAVLGRRIIPLFAITAL
Ga0335072_117417251	3300032898	Soil	MRRVLAATAAEFLEFQPLGRRFAVLGRRIIPLFAVTAL
Ga0314866_010565_1060_1176	3300033807	Peatland	MGGVLAATAAEFLEFQPLGRRLAVLRGRIVPLFAITAL
Ga0334840_126949_572_685	3300033824	Soil	MRRMLAATAAEFLELQPFRRRLPVLGRRIIPLFAITAL
Ga0334850_000593_18779_18886	3300033828	Soil	MLAATVAEFFELQPFRRRLTVLGGRIIPLFAITAL
Ga0334790_001654_660_767	3300033887	Soil	MLTAAAAEFLELQPLGRRLPILGGRIVSFFAVTAL
Ga0370483_0037978_99_206	3300034124	Untreated Peat Soil	MLAAAATEFFEFQPFRSRLPVLGGRIIPLFAITAL
Ga0370514_003619_235_351	3300034199	Untreated Peat Soil	MRRVLAAAATELFKFKAFGRRLPVLGGRIIPLFAITAL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095890

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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