Metagenome Family F095889

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F095889
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	82 residues
Representative Sequence	GGEVPRRVERWLLEQKAGDSLKLRVRREDKEITLEFRLGEIQETLYQVVEDSHAGEKARHIREGMLRGETSAVAVR
Number of Associated Samples	80
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.95 %
% of genes near scaffold ends (potentially truncated)	99.05 %
% of genes from short scaffolds (< 2000 bps)	83.81 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (49.524 % of family members)
Environment Ontology (ENVO)	Unclassified (49.524 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.524 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.31% β-sheet: 15.38% Coil/Unstructured: 67.31%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01553	Acyltransferase	53.33
PF04613	LpxD	5.71
PF00132	Hexapep	4.76
PF03023	MurJ	1.90
PF13180	PDZ_2	0.95
PF00672	HAMP	0.95
PF01784	NIF3	0.95
PF02899	Phage_int_SAM_1	0.95
PF02875	Mur_ligase_C	0.95
PF14579	HHH_6	0.95
PF14329	DUF4386	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	Cell wall/membrane/envelope biogenesis [M]	5.71
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	1.90
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	1.90
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	1.90
COG0327	Putative GTP cyclohydrolase 1 type 2, NIF3 family	Coenzyme transport and metabolism [H]	0.95
COG3323	PII-like insert in the uncharacterized protein YqfO, YbgI/NIF3 family	Function unknown [S]	0.95
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.95
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	90.48 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	44.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18.10 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	18.10 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.10 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.76 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.76 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.95 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_108455404	All Organisms → cellular organisms → Bacteria → Acidobacteria	2635	Open in IMG/M
3300001661\|JGI12053J15887_10345237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300001661\|JGI12053J15887_10529508	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005174\|Ga0066680_10348454	All Organisms → cellular organisms → Bacteria → Acidobacteria	944	Open in IMG/M
3300005174\|Ga0066680_10681171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300005186\|Ga0066676_10725987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300005454\|Ga0066687_10950283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300005554\|Ga0066661_10523495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300005555\|Ga0066692_10420351	All Organisms → cellular organisms → Bacteria → Acidobacteria	849	Open in IMG/M
3300005555\|Ga0066692_10855843	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300005557\|Ga0066704_10012973	All Organisms → cellular organisms → Bacteria	4694	Open in IMG/M
3300005574\|Ga0066694_10303877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300005586\|Ga0066691_10505250	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300006086\|Ga0075019_10248763	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300006162\|Ga0075030_100375537	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300006174\|Ga0075014_100798969	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300007255\|Ga0099791_10019623	All Organisms → cellular organisms → Bacteria	2897	Open in IMG/M
3300009012\|Ga0066710_100049791	All Organisms → cellular organisms → Bacteria	5167	Open in IMG/M
3300009038\|Ga0099829_10307011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1302	Open in IMG/M
3300009038\|Ga0099829_10452522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1064	Open in IMG/M
3300009089\|Ga0099828_10995947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300010320\|Ga0134109_10292956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300010321\|Ga0134067_10192202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300010358\|Ga0126370_12352610	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300010360\|Ga0126372_11999190	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300010361\|Ga0126378_11897809	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300010366\|Ga0126379_12563464	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300011269\|Ga0137392_11031805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300011269\|Ga0137392_11369812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300011270\|Ga0137391_10482369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300011270\|Ga0137391_10522272	All Organisms → cellular organisms → Bacteria → Acidobacteria	1003	Open in IMG/M
3300011270\|Ga0137391_10778527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300012096\|Ga0137389_10525454	All Organisms → cellular organisms → Bacteria → Acidobacteria	1016	Open in IMG/M
3300012096\|Ga0137389_10829593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300012096\|Ga0137389_11616376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300012189\|Ga0137388_10944042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300012199\|Ga0137383_11204365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300012202\|Ga0137363_10054830	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2874	Open in IMG/M
3300012202\|Ga0137363_10434953	All Organisms → cellular organisms → Bacteria → Acidobacteria	1096	Open in IMG/M
3300012203\|Ga0137399_10303769	All Organisms → cellular organisms → Bacteria → Acidobacteria	1319	Open in IMG/M
3300012203\|Ga0137399_10475399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
3300012205\|Ga0137362_10567335	All Organisms → cellular organisms → Bacteria → Acidobacteria	980	Open in IMG/M
3300012205\|Ga0137362_11340076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300012207\|Ga0137381_10177965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1839	Open in IMG/M
3300012349\|Ga0137387_10092424	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2097	Open in IMG/M
3300012361\|Ga0137360_11823044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012362\|Ga0137361_11562460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300012363\|Ga0137390_10748773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300012582\|Ga0137358_10090808	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2064	Open in IMG/M
3300012582\|Ga0137358_10416180	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300012582\|Ga0137358_10977950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300012683\|Ga0137398_10301343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300012683\|Ga0137398_10375778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300012683\|Ga0137398_10895669	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300012922\|Ga0137394_10041991	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3752	Open in IMG/M
3300012923\|Ga0137359_10998636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300012924\|Ga0137413_10097578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1824	Open in IMG/M
3300012924\|Ga0137413_10247869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1221	Open in IMG/M
3300012925\|Ga0137419_11270829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300012925\|Ga0137419_11367107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300012927\|Ga0137416_10330594	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1272	Open in IMG/M
3300012927\|Ga0137416_10699573	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300012927\|Ga0137416_11439612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300012927\|Ga0137416_12165635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300012930\|Ga0137407_10234246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1659	Open in IMG/M
3300012975\|Ga0134110_10579623	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300014154\|Ga0134075_10325528	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300014166\|Ga0134079_10028445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1854	Open in IMG/M
3300015241\|Ga0137418_10320218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1290	Open in IMG/M
3300015241\|Ga0137418_10448263	All Organisms → cellular organisms → Bacteria → Acidobacteria	1043	Open in IMG/M
3300015242\|Ga0137412_10383610	All Organisms → cellular organisms → Bacteria → Acidobacteria	1090	Open in IMG/M
3300015357\|Ga0134072_10093869	All Organisms → cellular organisms → Bacteria → Acidobacteria	912	Open in IMG/M
3300018088\|Ga0187771_11451868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300020004\|Ga0193755_1003802	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4804	Open in IMG/M
3300020199\|Ga0179592_10069827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1607	Open in IMG/M
3300020580\|Ga0210403_10115067	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2186	Open in IMG/M
3300021086\|Ga0179596_10417788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300021479\|Ga0210410_10609132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300021560\|Ga0126371_11698161	All Organisms → cellular organisms → Bacteria → Acidobacteria	755	Open in IMG/M
3300021560\|Ga0126371_12356382	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300024227\|Ga0228598_1074944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300026296\|Ga0209235_1265134	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300026297\|Ga0209237_1260856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300026306\|Ga0209468_1154381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300026314\|Ga0209268_1035752	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1668	Open in IMG/M
3300026377\|Ga0257171_1004506	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2147	Open in IMG/M
3300026482\|Ga0257172_1027575	All Organisms → cellular organisms → Bacteria → Acidobacteria	1019	Open in IMG/M
3300026530\|Ga0209807_1089240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1351	Open in IMG/M
3300026532\|Ga0209160_1031569	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3327	Open in IMG/M
3300026532\|Ga0209160_1062335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2074	Open in IMG/M
3300026536\|Ga0209058_1003355	All Organisms → cellular organisms → Bacteria	12973	Open in IMG/M
3300026551\|Ga0209648_10217665	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1442	Open in IMG/M
3300026557\|Ga0179587_10028055	All Organisms → cellular organisms → Bacteria → Acidobacteria	3100	Open in IMG/M
3300026999\|Ga0207949_1030341	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300027643\|Ga0209076_1001036	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5422	Open in IMG/M
3300027846\|Ga0209180_10768901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300027862\|Ga0209701_10658642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300027911\|Ga0209698_10112434	All Organisms → cellular organisms → Bacteria	2266	Open in IMG/M
3300028047\|Ga0209526_10668652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300028536\|Ga0137415_10247989	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300031754\|Ga0307475_10721480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300031823\|Ga0307478_11544935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300031962\|Ga0307479_10799657	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300031962\|Ga0307479_12149177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300032174\|Ga0307470_10093466	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	1700	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.24%
Aquatic	Environmental → Aquatic	3.81%
Plants	Host-Associated → Plants	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.24%
Sediment	Environmental → Aquatic → Sediment	3.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.81%
Loam	Environmental → Terrestrial → Soil → Loam	3.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	61.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	49.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.95%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1084554041	3300000955	Soil	GGEAPRRTDRWLREQKPGDLLKLWVGRDGKKVSLEFRLGEIKETFYGVTEDGRASEKARRIREGLLR
JGI12053J15887_103452371	3300001661	Forest Soil	RIDRWLQEQKVGDSLKLRVHREDKEITLEFRLGEIKEILYQVIEDSHAAEKARHIREGMLRGETSAVAVR*
JGI12053J15887_105295082	3300001661	Forest Soil	VADSPAQLADLRVGDTILIWNGGELPRRTDRWLREQKAGDFLKLWVGREGKKLSLEFRLGETKETFYGVTEDRRASEKARHIREGLLHGSTRGAFH*
Ga0066680_103484542	3300005174	Soil	NGGEVPKRADRWLQEQKAGDLLKLRVRREDKEIAIEFRLGEIKETLYLVGEDAHAGEKARHIREGILRGETSAVTVR*
Ga0066680_106811712	3300005174	Soil	LRAGDIILAWNGGEVPRRTDRWLREQKPGDLLKLSVGREGKKMSLEFRLGETKEIFYGVTEDGRASEKARHIREGLLHGVTRGGVH*
Ga0066676_107259871	3300005186	Soil	RTGDIILTWNGGEVPRRVDRWLQEQKPGDVLKLRIRREDTEIALEFQLGEIKETLYQVVEDSRAGEKARHIREGMLRGETSAITVRR*
Ga0066687_109502832	3300005454	Soil	RVERWLQEQKAGDQLKLRVRREDKEFSLEFRLGENKEIVYEVVEVSHAGEKARHIREGMLGGETRAIPVR*
Ga0066661_105234952	3300005554	Soil	GDVIVNWNGGEVPRRVDRWLQEQKPGDLLRLRIRREDKEIAIEFRLGEIKETLYVVGEDPHANEKARHIREGMLRGETSAVGVR*
Ga0066692_104203511	3300005555	Soil	LTWNGGEVPRRVDRWLQEQKPGDVLKLRIRREDKEMALEFRLGEINETLYVVTEDSHAGEKARHIREGMLRGETSAVTARR*
Ga0066692_108558431	3300005555	Soil	RRVERWLQEQRAGDLLKLRVRREGKEISLEFRLGENKETVYEVMEISHAGEKARHIRQGMLRGETSAIPVR*
Ga0066704_100129731	3300005557	Soil	IISWNGGEVPRRVERWLQEQRAGDLLKLRVRREGKEISLEFRLGENKETVYEVMEISHAGEKARHIRQGMLRGETSAIPVR*
Ga0066694_103038771	3300005574	Soil	EHWLQEQKTGDLLKLRVRREDKEISLEFRLGENNETLYEVMEVSHAGEKARHIREGMLRGETSAIPIR*
Ga0066691_105052502	3300005586	Soil	AGRAGLRTGDIILTWNGGEVPRRVDRWLQEQKPGDVLKLRIRREDKEIALEFQLGEIKETLYQVVEDSRAGEKARHIREGMLRGETSAITVRR*
Ga0075019_102487632	3300006086	Watersheds	EADSTAAQAGLREGDSIVNSNGAEAPRRLVRWVREQKPGDMVKLRVRREDREVALEFRLGESKETLYQVSENGHATEKARRIREGMLHGLSVASTAQ*
Ga0075030_1003755372	3300006162	Watersheds	MAAQAGLREGDSIVNWNGAEAPRRLVRWVREQKPGDMVKLRVRREDREVALEFRLGESKETLYQVSEDGHATEKARRIREGMLHGLSVASTAQ*
Ga0075014_1007989691	3300006174	Watersheds	GEAPRRVERWLQGQRTGDLLKLRIRREDKEMTLEFRLGEIQETAYQVVEDSHANEKARHIREGILRGETSAGAVH*
Ga0099791_100196231	3300007255	Vadose Zone Soil	EGQAARAGLRTGDIVLTWNGGEVPRRVDRWLQEQKPGDVLKLRIRREDKEMALEFRLGEINETLYVVTEDSHAGEKARHIREGILRRETSAVTARR*
Ga0066710_1000497911	3300009012	Grasslands Soil	STVDCEGSAAQAGLRAADVILSWKGGEVPRPLERWHQEQKAGDLLPLRLRRDDKEISLEFRLTENKETVYQVIEISHAGEKARHIREGMLRGETSAVAIR
Ga0099829_103070111	3300009038	Vadose Zone Soil	AQAGLRAGDIIVNWNGGEVPRLLERWLQEQKPGDLLKLRVRREDKEISLEFRLGEIKEILYEVSENPHASEPARHIREGMLRGETSAVLAH*
Ga0099829_104525221	3300009038	Vadose Zone Soil	AQAGLRAGDIIVNWNGGEVPRLLERWLQEQKPGDLLKLRVRREDKEISLEFRLGEIKEILYEVSENPHASEPVRHIREGMLRGETSAVSAH*
Ga0099828_109959471	3300009089	Vadose Zone Soil	DVILNWNGGEVPRRVDRWLQEQRAGDSLKLRVRREDKEIALEFRLGEIKETLYQVVEDSHANEKARRIREGLLRGETNAITVH*
Ga0134109_102929562	3300010320	Grasslands Soil	AGLRAGDVILSWNGGEVPRRVEHWLQEQKTGDLLKLRVRREDKEISLEFRLGENNETLYEVMEVSHAGEKARHIREGMLRGETSTIPIR*
Ga0134067_101922022	3300010321	Grasslands Soil	DRWLQEQKPGDLLRLRIRREDKEIAIDFRLGEIKETLYVVGEDPHANEKARHIREGMLRGETIAVGVR*
Ga0126370_123526102	3300010358	Tropical Forest Soil	SQAGLRVGDAILTWNGGEVPRRPSRWVLEQNPGGTLALRIRREDKELSVEFKLGEMKETAYEVSEDSHATEKARRIREGLLRGETSAAAHH*
Ga0126372_119991902	3300010360	Tropical Forest Soil	GVFIVRAVDAADGFAVQAGLRVGDAILTWNGGEVPRRPSRWVLEQNPGGTLALRVRREDKELSVEFKLGEMKETAYEVSEDSHATEKARRIREGLLRGETSAAAHH*
Ga0126378_118978092	3300010361	Tropical Forest Soil	FAAQAGLRVGDAILTWHGAEPPRRLGRWVTEQNPGDILKLRVRRDDKEISLEFRLGEIKETTYEVFENSQAGEKARRIREGMLRGETSALAYR*
Ga0126379_125634642	3300010366	Tropical Forest Soil	WNGGEVPRRPSRRVMDQNPGDSLTLRVRREDKELSVQFHLGEIKETAYEVMEDSHATEKARRIREGLLRGETSAAAAHR*
Ga0137392_110318051	3300011269	Vadose Zone Soil	AQAGLRAGDVILNWNGGEVPRRVEHWLQEQKTGDPLKLRVRREDKEISLEFRLGENKETLYEVMEISHAGEKPRHIREGMLRGETSAIPIR*
Ga0137392_113698122	3300011269	Vadose Zone Soil	GEVPRRVDRWLQEQKVGDVLKLRVRREDKEFTLEFRLGEMKETLYQVIEDPHAGEKARHIREGMLRGETSAVGVR*
Ga0137391_104823692	3300011270	Vadose Zone Soil	LRAGDIIVNWNGGEVPRLLERWLQEQKPGDLLKLRVRREDKEISLEFRLGEIKEILYEVSENPHASESVRHIREGMLRGETSAVSAH*
Ga0137391_105222722	3300011270	Vadose Zone Soil	GGEVPRRVERWLLEQKAGDSLKLRVRREDKEITLEFRLGEIQETLYQVVEDSHAGEKARHIREGMLRGETSAVAVR*
Ga0137391_107785271	3300011270	Vadose Zone Soil	MEHEPNGPFVVSRADSESQPARAGLRTGDIVLNWNGGEVPRRVDSWLQEQKPGDVLKLRIRREEKEMALEFRLGEINETLYVVAEDAHAGEKARHIREGMLRGETSAVTAHR*
Ga0137389_105254542	3300012096	Vadose Zone Soil	GWNGAEVPRRLERWVSGQKPGDLLKLRIRREEKEISLEFRLREIKETVYVVSEDAHATEKARNIREGLLRGETAAVLHH*
Ga0137389_108295931	3300012096	Vadose Zone Soil	AARAGLRTGDIIQTWNGGEVPRRTDRWLQEQRPGDVLKLRIRREDKEIAMEFRLGETKETLYQVVEDSRAGEKARHIREGMLRGETSAITVRR*
Ga0137389_116163762	3300012096	Vadose Zone Soil	ITWNGGEVPRRVECWLQEQKAGDALKLRVRREEKELSVEFRLGEIKEIRSQVLEDAHAGEKARHIREGILHGETSASPVH*
Ga0137388_109440422	3300012189	Vadose Zone Soil	EVPKRLEHWLQEQKAGDLLKLRVRREDKDISLEFRLGEIKETLYQVIEDSHAGEKARHVRVGMLRGETSGVAIR*
Ga0137383_112043652	3300012199	Vadose Zone Soil	RDIVLTWNGGEVPRRVDHWLQEQKPGDMLKLRIRREDKEMAIELRLGEIKETLYVVAEDSHASEKARRIREGMLRGETNAVTAHR*
Ga0137363_100548301	3300012202	Vadose Zone Soil	QAGLRAGDVILNWNGGEVPKRVEHWLQDQKAGDLLKLLVRRDDNEISIEFRLGEINETLYEVMEVSHAAEKARHIREGMLRGETSAVAVR*
Ga0137363_104349531	3300012202	Vadose Zone Soil	EVPRRIDRWLQEQKPSDVLKLRIRREDKEMALEFRLGEIKETLYVVGEDSHAGEKARHIREGILRGETSAVTARR*
Ga0137399_103037693	3300012203	Vadose Zone Soil	ILVWNGGEVPRRTDRWLREQKPGDLLKLWVGREGKKVSLEFRLGETKETFYGVTEDGRASEKARHIREGLLHGVTRGGVH*
Ga0137399_104753992	3300012203	Vadose Zone Soil	QAGLRAGDVIVNWNGAEAPRRVERWLQEQKAGELLKLRVRREDKEMTIEFRLGEIKETFYQVVEDSHAGEKARHIREGMLRGETSAVLVH*
Ga0137362_105673351	3300012205	Vadose Zone Soil	LAWNGGEVPRRTDRWLREQKPGDILKLWVSREGKRVSLEFRLGEIKETFYGVKEDGHAGEKARRIREGLLHGVTRGAAVH*
Ga0137362_113400762	3300012205	Vadose Zone Soil	RPGDAIITWNGGEVPRRVERWLQEQKAGDALKLRVRREEKELSVEFRLGEIKEIRHQVLEDAHAGEKARLIREGILHGETSAGPVH*
Ga0137381_101779651	3300012207	Vadose Zone Soil	GDIIVTWNGAEAPRRVDRWLQEQKPGDMLKLRIRREDKEIALEFQLGEIKETLYQVVEDSRAGEKARHIREGMLRGETSAITVRR*
Ga0137387_100924243	3300012349	Vadose Zone Soil	RVEHWLQEQKAGDLLKLRVRRGDKEISLEFQLGENKETLYQVMEISHAGEKPRHIREGMLRGETSTIPIR*
Ga0137360_118230442	3300012361	Vadose Zone Soil	GGEVPRRTDRWLREQKPGDILKLWVSREGKRVSLEFRLGEIKETFYGVTEDGHAGEKARHIREGLLHGVTRGGAVH*
Ga0137361_115624602	3300012362	Vadose Zone Soil	SAAQAGLRPGDAIITWNGGEVPRRVERWLQEQKAGDALKLRVRREEKELSVEFRLGEIKEIRHQVLEDAHAGEKARLIREGILHGETSAGPVH*
Ga0137390_107487732	3300012363	Vadose Zone Soil	GEVPRLLERWLQEQKPGDLLKLRVRREDKEISLEFRLGEIKEIVYEVSENPHASEQARHIREGMLWGVTSAVPVH*
Ga0137358_100908083	3300012582	Vadose Zone Soil	MEHWLQEQKAGDLLKLRVRREDKEISLEFRLGEINETLYEVMEVPHAGEKARRIREGLLRGETSAIPIR*
Ga0137358_104161802	3300012582	Vadose Zone Soil	MEHWLQEQKAGDLLKLRVRREDKEISLEFRLGEINETLYEVMEVSHAGEKARRIREGILRGETSAIPIR*
Ga0137358_109779502	3300012582	Vadose Zone Soil	EAPRRTDRWLREQKPGDLLKLWVVREGKKVSLEFLLGEIKETFYGVTEDGHAGEKARHIREGLLHGVTRGGAVP*
Ga0137398_103013432	3300012683	Vadose Zone Soil	GDIVLTWNGGEVPRRVDRWLQEQKPGDVLKLRIRREDKEMAFEFRLGEINETLYVVTEDSHAGEKARHIREGILRGETSAVTARR*
Ga0137398_103757782	3300012683	Vadose Zone Soil	GDIVLTWNGGEVPRRVDRWLQEQKPGDVLKLRIRREDKEMALEFRLGEINETLYVVTEDSHAGEKARHIREGMLRGETSAVTARR*
Ga0137398_108956691	3300012683	Vadose Zone Soil	WLQEQKPSDVLKLRIRREDKEMALEFRLGEIKETLYVVGEDSHAGEKARHIREGILRGETSAVTARR*
Ga0137394_100419915	3300012922	Vadose Zone Soil	GDTILVWNGGEVPRRTDRWLREQKPRDLLKLWIGREGKKVSLEFRLGEIKETFYGVMEDGHAGEKARHIREGLLHGVTRGGAVH*
Ga0137359_109986361	3300012923	Vadose Zone Soil	DSPAQLADLRVGDTILVWNGGEAPRRTDRWLREQKPGDLLKLWVGREGKKVSLEFRLGEIKETFHGVTEDGRASEKARHIREGLLHGVTRGGAVP*
Ga0137413_100975781	3300012924	Vadose Zone Soil	LTWNGGEVPRRVDRWLQEQKPGDVLKLRIRREDKEMALEFRLGEINETLYVVAEDAHASEKARHIREGMLRGETSAVTAHR*
Ga0137413_102478691	3300012924	Vadose Zone Soil	EGQVARAGLRTGDIVLTWNGGEVPRRVDRWLQEQKPGDVLKLRIRREDKEMAFEFRLGEINETLYVVTEDSHAGEKARHIREGMLRGETSAVTARR*
Ga0137419_112708292	3300012925	Vadose Zone Soil	EVPRRVDRWLQEQKAGDLLKLRVRRNDKDIAVEFRLGEIKETLYVVGEDAHAGEKARGIREGMLRGETSAVAIR*
Ga0137419_113671072	3300012925	Vadose Zone Soil	LPGDVILNWNGDEVPKRVEHWLQEQKAGDLLKLRVRRDDKDISFEFRLGEMKETLYQVIEDSHAGEKARHVRVGMLRGETSAVAIR*
Ga0137416_103305941	3300012927	Vadose Zone Soil	ADRWLQEQKPGDLLKLRVRREDKEMALEFRLGETKETLYQVIEDSGAGEKARHIRDGMLRGETSAVAVR*
Ga0137416_106995731	3300012927	Vadose Zone Soil	NWAGGEAPRRVDRWLQEQKAGDSLKLRVRREDKELTIEFRLGEIKETLYQVVEDPRASEKARHIREGILRGETSVAVVH*
Ga0137416_114396121	3300012927	Vadose Zone Soil	GGEVPRRPDRWLHEQRPGDLLKLWVNREEKRMSLEFRLGGIKETFYGIAEDPRAGEKARRIRDGLLRGVTRSAAVH*
Ga0137416_121656352	3300012927	Vadose Zone Soil	NGGEAPKRVEHWLQEERPGDLLKLRVRREDKEISLEFRLGEIKETLYEINEISQAGEKARHIREGMLRGETSAIPVH*
Ga0137407_102342463	3300012930	Vadose Zone Soil	GEVPRRTDRWLREQKPGDLLKLWVGREEKKVSLEFRLGQIKETFYGVTENGRANEKARHIREGLLHGVTRGGVH*
Ga0134110_105796232	3300012975	Grasslands Soil	VPRRVERWLQEQRAGDLLKLRVRREGKEISLEFRLGENKETVYEVMEISHAGEKARHIRQGMLRGETSAIPVR*
Ga0134075_103255282	3300014154	Grasslands Soil	DIIIGWNGGEVPRRLERWLSGQKPGDLLKLRIRREEKEISLELRLGEIKETVDVVAEDAHASEKARHIREGLLRGETAAVLHH*
Ga0134079_100284453	3300014166	Grasslands Soil	NGGEVPRRVDRWLQEQKPGDLLRLRIRREDKEIAIEFRLGEIKETLYVVGEDPHANEKARHIREGMLRGETIAVGVR*
Ga0137418_103202182	3300015241	Vadose Zone Soil	AALADLRAGDVLLNWNGGEVPRRVERWLQEQKAGDLLKLRVRREDKEISLEFRLGENKENVYEVIEISHAGEKARHIREGMLRGVTSAVGIR*
Ga0137418_104482633	3300015241	Vadose Zone Soil	WNGGEVPRRVDRWLQEQKAGDLLKLRVRRNDKDIAVEFRLGEIKETLYVVGEDAHAGEKARGIREGMLRGETSAVAIR*
Ga0137412_103836101	3300015242	Vadose Zone Soil	NSGEVPRRPERWAQEQGPGDLLKLRLRREDNEITLEFRLGEVKETIYQVAEDAHSSEKGRHIREGVLRGENSAAAVH*
Ga0134072_100938692	3300015357	Grasslands Soil	VGDAVLTWNGGEVPRRPSRWVAEQNPGDLLTLRVRREDKELSVEFRLGEIKEAAYEVLEDSHAADKARRIREGLLRGETAAAHR*
Ga0187771_114518682	3300018088	Tropical Peatland	VPRRPQRWVVDQNPGDVLKLRIRRDEKETALEFRLGEVKETFYQVAENSHASEKARHIREGMLRGETARAAAN
Ga0193755_10038021	3300020004	Soil	DLRVGDTILVWNGGEAPRRTDRWLREQKPGDLLKLWVGRDEKKVSLEFRLGEIKETFYGVTEDGRASEKARRIREGLLRGTTRGGATR
Ga0179592_100698273	3300020199	Vadose Zone Soil	GGEVPRRVDRWLQEQKPGDVLKLRIRREEKEIALEFRLGEINETLYVVAEDAHASEKARHIREGMLRGETSAVTAHR
Ga0210403_101150671	3300020580	Soil	VIISWNGGEVPKRVERWLQEQKAGDKLKLRVRREDKEISLEFRLGEIKETLYEVIEDSHAGEKARHIREGMLRGETSAISAIPVR
Ga0179596_104177882	3300021086	Vadose Zone Soil	NWNGGEVPGRVEHWLQEQKAGDLLKLRVRREDKEISLEFRLGEINETLYEVMEISHAGEKPRHIREGMLRGETSAIPIR
Ga0210410_106091321	3300021479	Soil	VGDVIVNWDGGEAPRRVERWLQEQKAGELLKLRVRREEKEMTIEFRLGENKEILYQVIEDSHASEKARHIRDGMLRGETSAIAVH
Ga0126371_116981612	3300021560	Tropical Forest Soil	GRWVTEQNPGDVLKLRVRRDDKEISLEFRLGEVKETIYEVLEDSQATEKARRLREGMLRGDTTGSRQK
Ga0126371_123563822	3300021560	Tropical Forest Soil	WNGGEVPRRPSRRVMDQNPGDSLTLRVRREDKELSVQFHLAEIKETAYEVMEDSHATEKARRIREGLLRGETSAAAAGHH
Ga0228598_10749441	3300024227	Rhizosphere	EAGLRLGDVILGWNGGEVPRRPERWLREQKAGDLLKLRIRRDEKEVSLEFRLGETKETVYGVTEDSQTGEKAREIRDGLLHGVTRSVAVH
Ga0209235_12651342	3300026296	Grasslands Soil	RAGDIILAWNGGEVPRRTDRWLREQKPGDLLKLSVGREGKKMSLEFRLGETKEIFYGVTEDGRASEKARHIREGLLHGVTRGGVH
Ga0209237_12608562	3300026297	Grasslands Soil	GDIILTWNGGEVPRRVDRWLQEQKPGDVLKLRIRREDKEIALEFQLGEIKETLYQVVEDSRAGEKARHIREGMLRGETSAITVRR
Ga0209468_11543811	3300026306	Soil	DVIVNWNGGEVPRRVDRWLQEQKPGDLLRLRIRREDKEIAIEFRLGEIKETLYVVGEDPHANEKARHIREGMLRGETIAVGVR
Ga0209268_10357523	3300026314	Soil	VNRWLQEQKAGDLLKLRIRREEKEITIEFRLGEIKETLYVVGEDAHAGEKARHIREGILRGETSASAVR
Ga0257171_10045061	3300026377	Soil	ALADLRVGDTILAWNGGEVPRRTDRWLREQKPGDLLKLWVGREGKKVSLEFRLGEIKETFYVVTEDGRANEKARHIREGLLHGVTLGGAVY
Ga0257172_10275752	3300026482	Soil	VVVNWAGGEAPRRVDRWLQEQKAGDSLKLRVRREDKELTIEFRLGEIKETLYQVIEDSHAGEKARHVRVGMLRGETSAVAIR
Ga0209807_10892401	3300026530	Soil	GDVIVNWNGGEVPRRVDRWLQEQKPGDLLRLRIRREDKEIAIEFRLGEIKETLYVVGEDPHANEKARHIREGILRGETIAVGVR
Ga0209160_10315691	3300026532	Soil	IISWNGGEVPRRVERWLQEQRAGDLLKLRVRREGKEISLEFRLGENKETVYEVMEISHAGEKARHIRQGMLRGETSAIPVR
Ga0209160_10623351	3300026532	Soil	GWNGGEVPRRLERWLSGQKPGDLLKLRIRREEKEISLELRLGEIKETVDVVAEDAHASEKARHIREGLLRGETAAVLHH
Ga0209058_100335511	3300026536	Soil	ESSAAQAGLRAGDAIVNWNGGEVPRRVNRWLQEQKAGDLLKLRIRREEKEITIEFRLGEIKETLYVVGEDAHAGEKARHIREGILRGETSASAVR
Ga0209648_102176651	3300026551	Grasslands Soil	VQTWNGGEVPRRADRWLQEQKPGDVLKLRIRREDKEMALEFRLGETKETLYQVVEDSGAGEKARHIREGMLRGETSAVAVR
Ga0179587_100280555	3300026557	Vadose Zone Soil	HAGLRPGDVVLNWNGDEVPKRVEHWLQEQKAGDLLKLRVRRDDKDISFEFRLGEIKETLYQVIEDSHADEKARGVRKGMLRGETSAVAIR
Ga0207949_10303412	3300026999	Forest Soil	RVDRWLQEQRAGDSLKLRVRREDKELTIEFRLGEIKETLYQVVEDPRAGEKARHIREGMLRGETTLAVAH
Ga0209076_10010361	3300027643	Vadose Zone Soil	ADRWLQEQRPGDVLKLRIRREDKEMALEFRLGETKETFYQVVEDSAAGEKARHIREGILRGETSAVAVP
Ga0209180_107689011	3300027846	Vadose Zone Soil	SDGAASQAGLRAGDVILNWNGGEVPRRVDRWVQEQKAGDALKLRARREDKEFTLEFRLGEMKETLYQVTEDPHAGEKARHIREGILRGETSAVAVR
Ga0209701_106586422	3300027862	Vadose Zone Soil	RIDRWLQEQKAGNSLKLRVRREDKELSLEFRLGEIKEILHQVVEDSHAGEIARHIREGLLRGETSAVAVH
Ga0209698_101124341	3300027911	Watersheds	RLERWLQEQRPGDWLKLRIRREEKETTLEFRLGEITETAYQVVEDSHAGEKARHIREGILHGETSAIVVR
Ga0209526_106686521	3300028047	Forest Soil	AAQAGLRVGDVLLGWNGGELPRQPERWLRDQKPGDLLKLRVRREEKDVSIDFRLGQSRETFYGVTEDPHAGEKARRIREGLLRGVTSPVAVH
Ga0137415_102479893	3300028536	Vadose Zone Soil	PRRVDRWLQEQKAGDSLKLRVRREDKELTIEFRLGEIKETLYQVVEDPRASEKARHIREGILRGETSVAVVH
Ga0307475_107214801	3300031754	Hardwood Forest Soil	AEVPKRVDRWLQEQKAGDPLKLRVRREDEEITLEFRLGETKETLYQVIEDSHAGEKARRIREGMLRGESTAVAAR
Ga0307478_115449351	3300031823	Hardwood Forest Soil	LRAGDIILNWNGGEVPRSVDRWVHEQDAGDPLKLRLRREEKEITLGFRLGEIKETLYQVVEDSRAGEKARHIREGLLHGETSAIAVQ
Ga0307479_107996572	3300031962	Hardwood Forest Soil	WLQEQKPGDRLKLLVRREEKEIAIEFRLGEIKEILYQVVEDSRAGEKARHIREGMLRGETSALTAR
Ga0307479_121491772	3300031962	Hardwood Forest Soil	GILNWNGGEVPRRLERWVREQKSGDVVKVRVRREEKEVAVEFRLGEAKEMQYEVSEDAHASDKARHIREGLLHGQTMPSPVH
Ga0307470_100934661	3300032174	Hardwood Forest Soil	RVGDTILVWNGGEVPRRTDRWLREQKPGDLLKLWVVREGKKMSLEFRLGEIKETFYGVTEDGRASEKARHIREGLLHGTTRGGAIH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095889

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences