Metagenome / Metatranscriptome Family F095869

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095869
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	49 residues
Representative Sequence	ASDFPHEGIVDMKKAVDEFLSREDIPEAAKRKISYDNPKRLYGL
Number of Associated Samples	94
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.86 %
% of genes near scaffold ends (potentially truncated)	93.33 %
% of genes from short scaffolds (< 2000 bps)	89.52 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.286 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.476 % of family members)
Environment Ontology (ENVO)	Unclassified (32.381 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.11% β-sheet: 0.00% Coil/Unstructured: 63.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF07883	Cupin_2	34.29
PF01042	Ribonuc_L-PSP	26.67
PF04909	Amidohydro_2	6.67
PF13482	RNase_H_2	3.81
PF01565	FAD_binding_4	2.86
PF02146	SIR2	1.90
PF04972	BON	1.90
PF01315	Ald_Xan_dh_C	1.90
PF01797	Y1_Tnp	1.90
PF00881	Nitroreductase	0.95
PF04255	DUF433	0.95
PF08915	tRNA-Thr_ED	0.95
PF00515	TPR_1	0.95
PF02069	Metallothio_Pro	0.95
PF08031	BBE	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	26.67
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	1.90
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.90
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.95
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.95
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	77.14 %
Unclassified	root	N/A	5.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.90 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	40.95 %
Unclassified	root	N/A	5.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.95 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.95 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	40.95 %
Unclassified	root	N/A	5.71 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.95 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	39.05 %
Unclassified	root	N/A	5.71 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.95 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.95 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	39.05 %
Unclassified	root	N/A	5.71 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.95 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.95 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	39.05 %
Unclassified	root	N/A	5.71 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	0.95 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.95 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	39.05 %
Unclassified	root	N/A	5.71 %
unclassified Nostoc	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc	0.95 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.95 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	39.05 %
Unclassified	root	N/A	5.71 %
Nostoc sp. CHAB 5844	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. CHAB 5844	0.95 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17045356	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1081	Open in IMG/M
2162886012\|MBSR1b_contig_13401870	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	970	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0753455	Not Available	2985	Open in IMG/M
3300000890\|JGI11643J12802_12268423	All Organisms → cellular organisms → Bacteria	1914	Open in IMG/M
3300002128\|JGI24036J26619_10108825	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300005169\|Ga0066810_10184483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	516	Open in IMG/M
3300005183\|Ga0068993_10341504	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300005289\|Ga0065704_10243029	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300005356\|Ga0070674_100101594	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300005518\|Ga0070699_100553883	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1047	Open in IMG/M
3300005518\|Ga0070699_101487361	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	621	Open in IMG/M
3300005536\|Ga0070697_100255879	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300005575\|Ga0066702_10737779	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300005844\|Ga0068862_101305767	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	727	Open in IMG/M
3300006049\|Ga0075417_10250689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	849	Open in IMG/M
3300006175\|Ga0070712_100213241	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300006844\|Ga0075428_100633639	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300006845\|Ga0075421_100529998	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1395	Open in IMG/M
3300006852\|Ga0075433_10853450	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300006881\|Ga0068865_101033082	All Organisms → cellular organisms → Bacteria → Proteobacteria	721	Open in IMG/M
3300006904\|Ga0075424_102341462	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300007004\|Ga0079218_10240037	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300007076\|Ga0075435_101819222	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300009012\|Ga0066710_101655996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	977	Open in IMG/M
3300009078\|Ga0105106_10743051	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300009078\|Ga0105106_11243856	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300009094\|Ga0111539_13257634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300009098\|Ga0105245_11069081	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	853	Open in IMG/M
3300009156\|Ga0111538_10667928	Not Available	1317	Open in IMG/M
3300009162\|Ga0075423_10012630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8196	Open in IMG/M
3300009168\|Ga0105104_10643633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300009609\|Ga0105347_1007376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3859	Open in IMG/M
3300009678\|Ga0105252_10242365	All Organisms → cellular organisms → Bacteria → Proteobacteria	787	Open in IMG/M
3300009814\|Ga0105082_1122074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M
3300010043\|Ga0126380_11128042	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300010043\|Ga0126380_12042470	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300010047\|Ga0126382_10786891	Not Available	809	Open in IMG/M
3300010047\|Ga0126382_11297757	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300010362\|Ga0126377_10390793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1399	Open in IMG/M
3300010397\|Ga0134124_10774902	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	956	Open in IMG/M
3300010397\|Ga0134124_11395996	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300011332\|Ga0126317_11081854	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300011397\|Ga0137444_1053290	All Organisms → cellular organisms → Bacteria → Proteobacteria	626	Open in IMG/M
3300011437\|Ga0137429_1012055	All Organisms → cellular organisms → Bacteria → Proteobacteria	2463	Open in IMG/M
3300012039\|Ga0137421_1095354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	853	Open in IMG/M
3300012469\|Ga0150984_120883195	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300012924\|Ga0137413_10970033	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300012929\|Ga0137404_10932516	All Organisms → cellular organisms → Bacteria → Proteobacteria	793	Open in IMG/M
3300012930\|Ga0137407_12238739	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300012931\|Ga0153915_10469360	All Organisms → cellular organisms → Bacteria → Proteobacteria	1435	Open in IMG/M
3300012976\|Ga0134076_10174490	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	891	Open in IMG/M
3300013096\|Ga0157307_1029989	All Organisms → cellular organisms → Bacteria → Proteobacteria	941	Open in IMG/M
3300014265\|Ga0075314_1000187	All Organisms → cellular organisms → Bacteria → Proteobacteria	9865	Open in IMG/M
3300014883\|Ga0180086_1025188	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1350	Open in IMG/M
3300014884\|Ga0180104_1003730	All Organisms → cellular organisms → Bacteria → Proteobacteria	3240	Open in IMG/M
3300015254\|Ga0180089_1041252	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	894	Open in IMG/M
3300015374\|Ga0132255_105198948	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300015374\|Ga0132255_105663537	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300017966\|Ga0187776_10182309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1311	Open in IMG/M
3300018063\|Ga0184637_10307599	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300018063\|Ga0184637_10324200	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300018063\|Ga0184637_10763378	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300018082\|Ga0184639_10228684	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300018082\|Ga0184639_10250560	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300018422\|Ga0190265_11914969	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300018422\|Ga0190265_13016095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. CHAB 5844	562	Open in IMG/M
3300019208\|Ga0180110_1174948	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300020003\|Ga0193739_1042256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1179	Open in IMG/M
3300020018\|Ga0193721_1006222	All Organisms → cellular organisms → Bacteria	3125	Open in IMG/M
3300020065\|Ga0180113_1290544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1099	Open in IMG/M
3300021051\|Ga0206224_1022653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	754	Open in IMG/M
3300022534\|Ga0224452_1047205	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1274	Open in IMG/M
3300025569\|Ga0210073_1059375	All Organisms → cellular organisms → Bacteria → Proteobacteria	804	Open in IMG/M
3300025925\|Ga0207650_10763974	All Organisms → cellular organisms → Bacteria → Proteobacteria	818	Open in IMG/M
3300025936\|Ga0207670_10163363	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1664	Open in IMG/M
3300026121\|Ga0207683_12077638	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300026535\|Ga0256867_10344309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300027395\|Ga0209996_1033811	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300027722\|Ga0209819_10126534	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300027840\|Ga0209683_10598304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300027862\|Ga0209701_10452428	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	706	Open in IMG/M
3300027873\|Ga0209814_10016034	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3005	Open in IMG/M
3300027909\|Ga0209382_10762784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1034	Open in IMG/M
3300027952\|Ga0209889_1004826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3668	Open in IMG/M
3300028380\|Ga0268265_10499803	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300030006\|Ga0299907_10368277	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1160	Open in IMG/M
3300030570\|Ga0247647_1162863	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	612	Open in IMG/M
3300031226\|Ga0307497_10545789	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300031469\|Ga0170819_14627909	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300031538\|Ga0310888_10976843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300031548\|Ga0307408_100164404	Not Available	1766	Open in IMG/M
3300031720\|Ga0307469_11681293	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300031852\|Ga0307410_10211381	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1487	Open in IMG/M
3300031858\|Ga0310892_10156760	Not Available	1327	Open in IMG/M
3300031962\|Ga0307479_11552108	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	618	Open in IMG/M
3300031965\|Ga0326597_10258422	All Organisms → cellular organisms → Bacteria → Proteobacteria	2005	Open in IMG/M
3300032001\|Ga0306922_10685331	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1080	Open in IMG/M
3300032003\|Ga0310897_10664672	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300032005\|Ga0307411_10129687	All Organisms → cellular organisms → Bacteria → Proteobacteria	1841	Open in IMG/M
3300032005\|Ga0307411_10748118	Not Available	856	Open in IMG/M
3300032075\|Ga0310890_10217790	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1322	Open in IMG/M
3300032163\|Ga0315281_11778785	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300032174\|Ga0307470_10609893	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	817	Open in IMG/M
3300033433\|Ga0326726_10651705	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1014	Open in IMG/M
3300033486\|Ga0316624_12268487	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.33%
Host-Associated	Host-Associated	26.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.57%
Plants	Host-Associated → Plants	26.67%
Aquatic	Environmental → Aquatic	24.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.10%
Sediment	Environmental → Aquatic → Sediment	13.33%
Freshwater	Environmental → Aquatic → Freshwater	9.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.57%
Marine	Environmental → Aquatic → Marine	1.90%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.95%
Peat	Environmental → Terrestrial → Peat	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.71%
Loam	Environmental → Terrestrial → Soil → Loam	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.90%
Sand	Environmental → Terrestrial → Soil → Sand	1.90%
Lake	Environmental → Aquatic → Freshwater → Lake	0.95%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.95%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.95%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.95%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.57%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.86%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.90%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.90%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.95%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.95%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.95%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.95%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.95%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.95%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.95%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.95%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011397	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT319_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019208	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT231_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021051	Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos A1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030570	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01350130	2088090014	Soil	MTTSRDLELLGDDCLFWASDFPHEGIVDMAKAVKEFLDREDIPDAAKRKISYXNPKRLYA
MBSR1b_0772.00003400	2162886012	Miscanthus Rhizosphere	FQCGEEMTTGRDLELLGDECLFWASDFPHEGIVSMSKAVKEFLDREDIPEGSKRKISYDNPKRLYRI
ICChiseqgaiiDRAFT_07534554	3300000033	Soil	CLFWASDFPHEGIVDMSKAVEEFLSRDDIPASAKKKISYDNAKKLYGL*
JGI11643J12802_122684235	3300000890	Soil	FQCGEEMTTSRDLELLGTECLFWASDFPHEGIVDMSKAVKEFLSREDIPESAKRKISHDNPKRLYGL*
JGI24036J26619_101088252	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	IVDMKKAVDEFLSREDIPEAAKRKISYDNPKRLYGL*
Ga0066810_101844832	3300005169	Soil	FWASDFPHEGIVDMAKAVKEFLDREDIPDAAKRKISYDNPKRLYAL*
Ga0068993_103415042	3300005183	Natural And Restored Wetlands	LGDECLFWASDFPHEGIVSMKKAVQEFLDRDDIPMASKRKISYDNPKKLYAL*
Ga0065704_102430293	3300005289	Switchgrass Rhizosphere	SDFPHEGIVDMAKAVTEFLERKDISKASKRKISYDNSKKLYGL*
Ga0070674_1001015941	3300005356	Miscanthus Rhizosphere	LFWASDFPHEGIVDMSKAVEEFLSRGDIPASSKRKISYDNAKKLYGL*
Ga0070699_1005538831	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DFPHEGIVSMKKAVDEFLERDDIPAASKRKIGRENPKKLYRL*
Ga0070699_1014873612	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DFPHEGIVSMSKAVKEFLDREDIPEGSKRKISYDNPKRLYRI*
Ga0070697_1002558794	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ASDFPHEGIVDMKKAVDEFLSREDIPEAAKRKISYDNPKRLYGL*
Ga0066702_107377791	3300005575	Soil	CGEEMTTSRDLELLGDACLFWASDFPHEGIVDMSKAVNEFLSREDIPEAAKRKISYDNPKRLYRL*
Ga0068862_1013057671	3300005844	Switchgrass Rhizosphere	EGIVSMSKAVKEFLDREDIPEGAKRKISYENPKRLYRI*
Ga0075417_102506893	3300006049	Populus Rhizosphere	DMSKAVNEFLSRGDIPEASKRKISYANPKRLYAL*
Ga0070712_1002132414	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ECLFWASDFPHEGIVDMSKAVNEFLSREDIPEAAKRKISYDNPKRLYRI*
Ga0075428_1006336391	3300006844	Populus Rhizosphere	FPHEGIVDMSKAVNEFLSRGDIPEASKRKISYANPKRLYAL*
Ga0075421_1005299981	3300006845	Populus Rhizosphere	CLFWASDFPHEGIVSMKKAVDEFLDRHDIPEASKRKIGRENPKMLYRL*
Ga0075433_108534501	3300006852	Populus Rhizosphere	FPHEGIVDMKKAVDEFLSREDIPEAAKRKISYDNPKRLYGL*
Ga0068865_1010330822	3300006881	Miscanthus Rhizosphere	FWASDFPHEGIVSMSKAVKEFLDREDIPEGSKRKISYDNPKRLYRL*
Ga0075424_1023414622	3300006904	Populus Rhizosphere	PHEGIVNMRKAVDEFLDREDISATAKKKISYDNPKKLYRL*
Ga0079218_102400374	3300007004	Agricultural Soil	DECLFWASDFPHEGIVDMSKAVNEFLSREDIPTGAKRKISYDNPKRLYRL*
Ga0075435_1018192222	3300007076	Populus Rhizosphere	ASDFPHEGILDMATAVKEFLTREDIPAEAKYKIGNENPRRLYGLG*
Ga0066710_1016559961	3300009012	Grasslands Soil	HEGIVDMSKAVNEFLSREDIPETSKRKISYDNPKRLYGL
Ga0105106_107430512	3300009078	Freshwater Sediment	GEEMTTSRDLELLGDECLFWASDFPHEGIVSMKKAVDEFLDREDIPEASKRKISYDNPKKLYGL*
Ga0105106_112438562	3300009078	Freshwater Sediment	SMKKAVDEFVEREDIPEAAKRKISYDNPKRLYAL*
Ga0111539_132576341	3300009094	Populus Rhizosphere	QVYFQCGEEMTTGRDLELLGDQCLFWASDFPHEGIVDMSKAVEEFLSRGDIPASSKRKISYDNAKKLYGL*
Ga0105245_110690811	3300009098	Miscanthus Rhizosphere	FQCGEESTTRRDLEILGDGCLVWASDFPHEGIVNMAKAAGAFITRPDIPESSKRKIAEENPQRLYNLS*
Ga0111538_106679281	3300009156	Populus Rhizosphere	QCLFWASDFPHEGIVDMSKAVEEFLSRGDIPASSKRKISYDNAKKLYGL*
Ga0075423_1001263013	3300009162	Populus Rhizosphere	ELLGDECLFWASEFPHEGIVDMSKAVNEFLSREDIPEAAKRKISYDNPKRLYRI*
Ga0105104_106436331	3300009168	Freshwater Sediment	WPNRKWASDFPHEGIVDMAKAVREFLEREDIPDAAKRKITYDNAKRLYGL*
Ga0105347_10073765	3300009609	Soil	CLFWASDFPHEGIVSMKKAVDEFVEREDIPEAAKRKISYDNPKRLYGL*
Ga0105252_102423651	3300009678	Soil	DECLFWASDFPHEGIVSMKKAVQEFLDREDIPETSKRKISYDNPKKLYAL*
Ga0105082_11220741	3300009814	Groundwater Sand	GDECLFWASDFPHEGIVSMKKAVQEFLDRDDIPEPAKRKISYDNPKKLYGL*
Ga0126380_111280421	3300010043	Tropical Forest Soil	MTTSRDLELLGDECLFWASDFPHEGIVSMGNAVKEFLDRDDISDASKQKISYDNPKRLYAL*
Ga0126380_120424701	3300010043	Tropical Forest Soil	MAAAVKEFLTREDIPLEAKRKIAGDNPKRLYGIRN*
Ga0126382_107868912	3300010047	Tropical Forest Soil	YFQCGEELTTQRDLELLGDHCMLWATNFPHEGIVDMAAAVKEFLTREDIPLEAKRKIAGDNPKRLYGIRN*
Ga0126382_112977572	3300010047	Tropical Forest Soil	MITRRDLELLGDECPFWPSDFTHEGIVDIAKAVNELLDRKDILEPAKRKISYDNPKNLYKI*
Ga0126377_103907933	3300010362	Tropical Forest Soil	MTTRRDLELLGDECPFWPSDFTHEGIVDIAKAVNELLDRKDILEPAKRKISYDNPKNLYKI*
Ga0134124_107749023	3300010397	Terrestrial Soil	CLFWASDFPHEGIVSMGKAVEEFLEREDIPEPAKRKISYDNPKRLYGL*
Ga0134124_113959962	3300010397	Terrestrial Soil	GEEMTTSRDLELLGDECLFWASDFPHEGIVDMSKAVKEFLGRDDIPERAKHKISYENPKRLYRL*
Ga0126317_110818541	3300011332	Soil	TDMRKAVQEFTTREDIPESAKRKISYDNPKKLYRL*
Ga0137444_10532902	3300011397	Soil	CLFWASDFPHEGIVSMKKAVQEFLDRNDIPEASKRKISYDNPKKLYGL*
Ga0137429_10120551	3300011437	Soil	SRDLELLGDECLFWASDFPHEGIVSMKKAVQEFLDREDIPETSKRKISYDNPKKLYAL*
Ga0137421_10953543	3300012039	Soil	EGIADMTKAVREFLDRRDISEASKRKISYDNPKRLYAL*
Ga0150984_1208831951	3300012469	Avena Fatua Rhizosphere	FWASDFPHEGITDMRKAVQEFTGREDIPEPAKRKISYDNPKKLYRL*
Ga0137413_109700331	3300012924	Vadose Zone Soil	ASDFPHEGIVDMSKAVNEFLSREDIPEAAKRKISYDNPKNLYRL*
Ga0137404_109325161	3300012929	Vadose Zone Soil	SRDLELLGDDCLFWASDFPHEGIVDMAKAVKEFLDREDIPDAAKRNISYDNPKRLYVL*
Ga0137407_122387392	3300012930	Vadose Zone Soil	EGIVDMSKAVNEFLSREDIPEASKGKISYDNPKRLYGL*
Ga0153915_104693604	3300012931	Freshwater Wetlands	ASDFPHEGIVDMRKAVNEFLERDDIPPAAKRKISYDNPKRLYRL*
Ga0134076_101744901	3300012976	Grasslands Soil	IYFQCGEELTTRRDLELLGDHCLLWASDFPHEGITDMATAVKQFLMREDIPPESKRKIASENPKSLYATAR*
Ga0157307_10299893	3300013096	Soil	VDMKKAVDEFLSREDIPEAAKRKISYDNPKRLYGL*
Ga0075314_10001871	3300014265	Natural And Restored Wetlands	EECLFWASDFPHEGIVDMGKAVKEFLSREDISEAAKQKISYENPKRLYRL*
Ga0180086_10251883	3300014883	Soil	EEMTTGRDLELLGDECLFWASDFPHEGIVSMKKAVDEFLDRDDIPTAAKRKISYDNPKRLYGL*
Ga0180104_10037306	3300014884	Soil	LFWASDFPHEGIVDMSKAVNEFLGREDLSAASKRKISYDNPKKLYGL*
Ga0180089_10412521	3300015254	Soil	DMSKAVNEFLGREDLSAASKRKISYDNPKKLYGL*
Ga0132255_1051989482	3300015374	Arabidopsis Rhizosphere	IVDMSKAVNEFLSREDIPEAAKRKISYDNPKRLYRI*
Ga0132255_1056635372	3300015374	Arabidopsis Rhizosphere	DMSKAVNEFLSREDIPEAAKRKISYDNPKRLYGL*
Ga0187776_101823091	3300017966	Tropical Peatland	LFWASDFPHEGIVSMKKAVQEFLDREDIPQAAKRKISYDNPKRLYGL
Ga0184637_103075993	3300018063	Groundwater Sediment	SDFPHEGIVDMSRAVKEFLDRDDIPEPAKRKISYENPKRLYGL
Ga0184637_103242003	3300018063	Groundwater Sediment	PHEGIVDMGKAVKDFLQRQDIPNGSKRKISYDNPKRLYAL
Ga0184637_107633781	3300018063	Groundwater Sediment	SDFPHEGIVDMSRAVKEFLDRDDIPEPAKRKISYENPKRLYRL
Ga0184639_102286843	3300018082	Groundwater Sediment	DFPHEGIVDMSRAVKEFLDRDDIPEPAKRKISYENPKRLYGL
Ga0184639_102505603	3300018082	Groundwater Sediment	FWASDFPHEGIVDMGKAVKDFLQRQDIPNGSKRKISYDNPKRLYAL
Ga0190265_119149691	3300018422	Soil	SDFPHEGIVDMSKAVHEFLSRADIPAGAKRKISYDNPKRLYRI
Ga0190265_130160951	3300018422	Soil	DHCLFWASDFPHEGIVDMTKAVKEFLSRDDIPASSKKKISYDNAKRLYGL
Ga0180110_11749482	3300019208	Groundwater Sediment	VSMKKAVQEFLDRNDIPEASKRKIGRENPKKLYRL
Ga0193739_10422563	3300020003	Soil	LLGDECLFWASDFPHEGIVDMSRAVREFLDRDDIPEPAKRKISYENPKRLYRL
Ga0193721_10062221	3300020018	Soil	ELLGDECLFWASDFPHEGIVDMSKAVNEFLSREDIPEAAKRKISYDNPKRLYRI
Ga0180113_12905443	3300020065	Groundwater Sediment	LGDECLFWASDFPHEGIVDMSKAVNEFLGREDLSAASKRKISYDNPKKLYGL
Ga0206224_10226531	3300021051	Deep Subsurface Sediment	TGRDLELLGDECLFWASDFPHEGIVSMKKAVQEFLDREDIPQVSKRKISYDNPKKLYGL
Ga0224452_10472051	3300022534	Groundwater Sediment	IVDMAKAVKEFLDREDIPDAAKRKISYENPKRLYAL
Ga0210073_10593752	3300025569	Natural And Restored Wetlands	LELLGDGCLFWASDFPHEGIVSMKKAVQEFLDRDDIPAASKRKISYDNPKKLYAL
Ga0207650_107639742	3300025925	Switchgrass Rhizosphere	PHEGIVDMKKAVDEFLSREDIPEAAKRKISYDNPKRLYGL
Ga0207670_101633634	3300025936	Switchgrass Rhizosphere	FGIVDMSKAVNEFLSREDIPEAAKRKISYDNPKRLYGL
Ga0207683_120776381	3300026121	Miscanthus Rhizosphere	LLGDQCLFWASDFPHEGIVDMSKAVNEFLSREDIPEAAKRKISYDNPKRLYRI
Ga0256867_103443093	3300026535	Soil	PRASKLIERGQLYFQCGEEMTTSRDLDLLGDECLFWASDFPHEGIVDMAKAVSEFLERKDIPAASKLKIGYDNPKKLYAL
Ga0209996_10338113	3300027395	Arabidopsis Thaliana Rhizosphere	WASDFPHEGIVDMSKAVKEFLSREDIPESAKRKISHDNPKRLYGL
Ga0209819_101265342	3300027722	Freshwater Sediment	MTTSRDLELLGDDCLFWAADLPHEGIVDMAKAVREFLEREDIPDAAKRKISDDNAKDFYG
Ga0209683_105983041	3300027840	Wetland Sediment	FWASDFPHEGIVSMGKVVQEFVERDDIPEASKRKISYDNPKRLYGL
Ga0209701_104524283	3300027862	Vadose Zone Soil	MTTSRDLELLGDHCLFWASDFPHEGIVDMAKAVKEFMNREDIPEASKRKISYDNPKRLYG
Ga0209814_100160341	3300027873	Populus Rhizosphere	ELLGDECLFWASDFPHEGIVDMSKAVNEFLSRGDIPEASKRKISYANPKRLYAL
Ga0209382_107627841	3300027909	Populus Rhizosphere	MTTSRDLELLGDECLFWASDFPHEGIVSMKKAVDEFLDRHDIPEASKRKIGRENPKMLYR
Ga0209889_10048265	3300027952	Groundwater Sand	DFPHEGIVDMAKAVQEFLDRKDIPDAAKRKISYDNPKRLYAL
Ga0268265_104998033	3300028380	Switchgrass Rhizosphere	CGEEMTTGRDLELLGDECLFWASDFPHEGIVSMSKAVKEFLDREDIPEGAKRKISYENPKRLYRI
Ga0299907_103682771	3300030006	Soil	DECLFWASDFPHEGIVDMARAVNEFLERNDIPPSSKLKIGYDNPKRLYAL
Ga0247647_11628631	3300030570	Soil	QCGEEMTTSRDLDLLGDDCLFWASDFPHEGIVDMAKAVTEFLERKDISKASKRKISYDNSKKLYGL
Ga0307497_105457891	3300031226	Soil	FWASDFPHEGIVSMKKAVDEFVEREDIPEAAKRKISYDNPKRLYAL
Ga0170819_146279091	3300031469	Forest Soil	EEMTTSRDLELLGDGCLFWASDFPHEGIVDMAKAVKEFLDRKDILEPAKRKISYDNAKKLYRL
Ga0310888_109768431	3300031538	Soil	WASDFPHEGIVDMSKAVEEFLSRGDIPASSKRKISYDNAKKLYGL
Ga0307408_1001644042	3300031548	Rhizosphere	GIVDMSKAVQEFLSRDDIPASSKKKIGYDNAKKLYGL
Ga0307469_116812931	3300031720	Hardwood Forest Soil	LELLGDDCLFWASDFPHEGIVDMAKAVTEFLERKDISKASKRKISYDNSKKLYGL
Ga0307410_102113811	3300031852	Rhizosphere	TGRDLELLGDECLFWASDFPHEGIVSMKKAVDEFLEREDIPDVAKRKISYDNPKRLYSL
Ga0310892_101567601	3300031858	Soil	DLELLGDQCLFWASDFPHEGIVDMSKAVEEFLSRGDIPASSKRKISYDNAKKLYGL
Ga0307479_115521082	3300031962	Hardwood Forest Soil	SDFPHEGILDMAAAVKEFLTREDIPVASKHKIGNENPRRLYGLG
Ga0326597_102584221	3300031965	Soil	SDFPHEGIVDMSKAVNEFLGREDISAASKRKISYDNPKKLYGL
Ga0306922_106853311	3300032001	Soil	QCLFWASDFPHEGIVDMRKAVNEFLSREDIPEAAKRKISYDNPKRLYRL
Ga0310897_106646722	3300032003	Soil	PHEGIVSMSKAVKEFLDREDIPEGSKRKISYDNPKRLYRL
Ga0307411_101296871	3300032005	Rhizosphere	ELLGDECLFWASDFPHEGIVSMKKAVDEFLEREDIPDVAKRKISYDNPKKLYSL
Ga0307411_107481182	3300032005	Rhizosphere	LLGDQCLFWASDFPHEGIVDMSKAVQEFLSRDDIPALSKKKIGYDNAKKLYGL
Ga0310890_102177901	3300032075	Soil	DFPHEGIVSMKKAVDEFLEREDIPDAAKRKISYDNPKRLYSL
Ga0315281_117787852	3300032163	Sediment	VVSMKKAVQEFLDRDDIPAASKRKISYDNPKKLYGL
Ga0307470_106098931	3300032174	Hardwood Forest Soil	MTTSRDLELLGDECLFWASDFPHEGIVNMSKAVNEFLSREDIPEAAKRKISYDNPKKLYR
Ga0326726_106517053	3300033433	Peat Soil	GRDLELLGDECLFWASDFPHEGIVSMKKAVDEFLERDDIPEAAKRKISYDNPKRLYAL
Ga0316624_122684872	3300033486	Soil	DECLFWASDFPHEGIVDMSKAVNEFLERDDIPPAAKRKISYDNPKRLYRL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095869

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences