Metagenome / Metatranscriptome Family F095867

Basic Information
Family ID	F095867
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	49 residues
Representative Sequence	QDFDARHERAILKRRHRNGVNVPEIVRLYRPDVISKATGDREAKDCRK
Number of Associated Samples	96
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	96.19 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (29.524 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.905 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.32% β-sheet: 0.00% Coil/Unstructured: 48.68%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13525	YfiO	56.19
PF01904	DUF72	2.86

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	2.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	98.10 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	98.10 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	93.33 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	4.76 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	93.33 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	4.76 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	93.33 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	4.76 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	93.33 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.95 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	93.33 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.95 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118873093	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300003911\|JGI25405J52794_10084735	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	699	Open in IMG/M
3300004114\|Ga0062593_102772396	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300005186\|Ga0066676_11022202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300005332\|Ga0066388_107195324	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300005345\|Ga0070692_10071594	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1848	Open in IMG/M
3300005367\|Ga0070667_100088107	All Organisms → cellular organisms → Bacteria	2665	Open in IMG/M
3300005440\|Ga0070705_101425150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300005454\|Ga0066687_10695553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300005455\|Ga0070663_101703500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300005466\|Ga0070685_10210059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1270	Open in IMG/M
3300005548\|Ga0070665_101160192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	784	Open in IMG/M
3300005618\|Ga0068864_101438131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300005764\|Ga0066903_101342128	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1339	Open in IMG/M
3300005764\|Ga0066903_106495278	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	609	Open in IMG/M
3300005764\|Ga0066903_108608199	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300006175\|Ga0070712_100405040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1127	Open in IMG/M
3300006574\|Ga0074056_11816951	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300006581\|Ga0074048_13406488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300006797\|Ga0066659_11184596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300006844\|Ga0075428_100706488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1074	Open in IMG/M
3300007265\|Ga0099794_10398256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300009143\|Ga0099792_11044791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300009156\|Ga0111538_10364619	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300009553\|Ga0105249_10869650	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	967	Open in IMG/M
3300010043\|Ga0126380_11671918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300010396\|Ga0134126_10323888	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1803	Open in IMG/M
3300010398\|Ga0126383_11853267	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300010400\|Ga0134122_11728839	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300012198\|Ga0137364_10289678	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1214	Open in IMG/M
3300012207\|Ga0137381_10706606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	876	Open in IMG/M
3300012210\|Ga0137378_10632552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	980	Open in IMG/M
3300012359\|Ga0137385_10443742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1103	Open in IMG/M
3300012683\|Ga0137398_10974438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300012685\|Ga0137397_10843722	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	680	Open in IMG/M
3300012925\|Ga0137419_10769892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	785	Open in IMG/M
3300012929\|Ga0137404_10197463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1702	Open in IMG/M
3300012944\|Ga0137410_11685962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300012948\|Ga0126375_10442966	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	952	Open in IMG/M
3300012951\|Ga0164300_10867167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300012971\|Ga0126369_12430979	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300014969\|Ga0157376_10238633	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1693	Open in IMG/M
3300015053\|Ga0137405_1138742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4542	Open in IMG/M
3300015077\|Ga0173483_10354604	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300015201\|Ga0173478_10313077	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300015262\|Ga0182007_10033057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1754	Open in IMG/M
3300015371\|Ga0132258_10760098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2442	Open in IMG/M
3300015374\|Ga0132255_100374347	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2068	Open in IMG/M
3300015374\|Ga0132255_101955739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	892	Open in IMG/M
3300015374\|Ga0132255_102143748	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	852	Open in IMG/M
3300016319\|Ga0182033_11791332	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300016341\|Ga0182035_11870017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300016357\|Ga0182032_10125152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1861	Open in IMG/M
3300016387\|Ga0182040_10106697	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1913	Open in IMG/M
3300018054\|Ga0184621_10194118	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300018071\|Ga0184618_10236542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	771	Open in IMG/M
3300018074\|Ga0184640_10176854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	959	Open in IMG/M
3300018433\|Ga0066667_11539873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300018468\|Ga0066662_12967907	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300018482\|Ga0066669_11611842	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300019361\|Ga0173482_10081175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1135	Open in IMG/M
3300019867\|Ga0193704_1013051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1680	Open in IMG/M
3300019875\|Ga0193701_1091364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300019876\|Ga0193703_1007847	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1579	Open in IMG/M
3300019877\|Ga0193722_1136777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300019882\|Ga0193713_1031652	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1549	Open in IMG/M
3300020016\|Ga0193696_1084621	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	821	Open in IMG/M
3300021560\|Ga0126371_11066129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	948	Open in IMG/M
3300022534\|Ga0224452_1113124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	832	Open in IMG/M
3300022756\|Ga0222622_11164041	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300023077\|Ga0247802_1031062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300024055\|Ga0247794_10066187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1020	Open in IMG/M
3300025915\|Ga0207693_11027769	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300025926\|Ga0207659_10150968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1814	Open in IMG/M
3300025926\|Ga0207659_11098267	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300025939\|Ga0207665_10515700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	925	Open in IMG/M
3300025944\|Ga0207661_10973697	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	781	Open in IMG/M
3300025986\|Ga0207658_11601819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	595	Open in IMG/M
3300026301\|Ga0209238_1195098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300026314\|Ga0209268_1147939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300026374\|Ga0257146_1053627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	653	Open in IMG/M
3300026374\|Ga0257146_1068444	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300028379\|Ga0268266_10190666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1871	Open in IMG/M
3300028708\|Ga0307295_10097217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	792	Open in IMG/M
3300028708\|Ga0307295_10102768	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	771	Open in IMG/M
3300028755\|Ga0307316_10223052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M
3300028810\|Ga0307294_10304652	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300028811\|Ga0307292_10058801	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1451	Open in IMG/M
3300028819\|Ga0307296_10652793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300028880\|Ga0307300_10078186	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	973	Open in IMG/M
3300031099\|Ga0308181_1069943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	707	Open in IMG/M
3300031128\|Ga0170823_16820060	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300031231\|Ga0170824_105509288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1615	Open in IMG/M
3300031421\|Ga0308194_10145023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	727	Open in IMG/M
3300031446\|Ga0170820_12073248	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	970	Open in IMG/M
3300031446\|Ga0170820_13254200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	622	Open in IMG/M
3300031562\|Ga0310886_11089210	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300031716\|Ga0310813_10669707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	924	Open in IMG/M
3300031719\|Ga0306917_11005025	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300031719\|Ga0306917_11158358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300031720\|Ga0307469_10685234	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	927	Open in IMG/M
3300031941\|Ga0310912_10849404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300031942\|Ga0310916_10145472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1951	Open in IMG/M
3300032205\|Ga0307472_100849968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	839	Open in IMG/M
3300033412\|Ga0310810_10501245	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1207	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.86%
Host-Associated	Host-Associated	17.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.10%
Plants	Host-Associated → Plants	17.14%
Aquatic	Environmental → Aquatic	4.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.71%
Sediment	Environmental → Aquatic → Sediment	4.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Loam	Environmental → Terrestrial → Soil → Loam	11.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.95%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095867

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1188730932	3300002568	Soil	RYKRTIPKRRHRNGVNVAQIVRLYRTDVIAKATGDREAKDCRE*
JGI25405J52794_100847351	3300003911	Tabebuia Heterophylla Rhizosphere	RAILKRRHGNRVNVPQVVRLYRPDLIAKAPGDREAKNCRK*
Ga0062593_1027723962	3300004114	Soil	FDARHQRPIFKRRHRNAVNVSQIVRLYRPEVIPKATGEREAKDCRE*
Ga0066676_110222021	3300005186	Soil	RAILKRRHRNGVNVPEIVRLYRPDVIPKATGDREAKDCRE*
Ga0066388_1071953241	3300005332	Tropical Forest Soil	LDQRIGHQNFDARHECAILKSRHRYGVNVPEIVRLYRSDMIAKTTGDREAKDCRK*
Ga0070692_100715943	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LLELFDHRIGHQDFDARHKRAILKRGHRNTVNILEIVRLDRSDVISKATGDREAKDCR*
Ga0070667_1000881074	3300005367	Switchgrass Rhizosphere	IGHQDFDAWHERVILKRGHRNSVNVPEIVRLYRPNVIPKATGDREAKDCRK*
Ga0070705_1014251502	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LLELLDHGIGDQDLDARHQRAILERGHRNAVNVPKIVRLYRPDVISKATGDREAKDCRE*
Ga0066687_106955531	3300005454	Soil	KLFDQCIRHQNFDARYKRSIPKRRHGNGVNVAQIVRLYRTDVIAKATGDCEAKDCRE*
Ga0070663_1017035002	3300005455	Corn Rhizosphere	FDHRIGHQDFDAWHERVILKRGHRNSVNVPEIVRLYRPNVIPKATGDREAKDCRK*
Ga0070685_102100592	3300005466	Switchgrass Rhizosphere	NQRIGHQDFDARHQRVILKRGDRDAVNIAEIIRLYRPDVISKATGDRKAKDCR*
Ga0070665_1011601921	3300005548	Switchgrass Rhizosphere	ERAILKRRHRNGVNVPEIVRLYRPDVISKATGDRQAKDCRK*
Ga0068864_1014381312	3300005618	Switchgrass Rhizosphere	DARHQRAILERGHRNAVNVPKIVRLYRPDVISKATGDREAKDCR*
Ga0066903_1013421282	3300005764	Tropical Forest Soil	LFNHRVSDQNFDTWHERAILKRRHRDGVDVSEIVRLYRPDVIAKATREREAEDCRK*
Ga0066903_1064952782	3300005764	Tropical Forest Soil	RIGHQNFDARHECAILKSRHRYGVNVPEIVRLYRSDVISKTTGDREAKDCRK*
Ga0066903_1086081991	3300005764	Tropical Forest Soil	QRIGHQNFDARHECAILKSRHRYGVNVPEIVRLYRSDMIAKTTGDREAKDCRK*
Ga0070712_1004050402	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ERAILKRRHRNGVNVPEIVRLYRPDVIPKATGDREAKDCRE*
Ga0074056_118169511	3300006574	Soil	GDARHQRAILKRGHRNGVNVPEIVRLYRPDVISKATGDREAKDCRE*
Ga0074048_134064881	3300006581	Soil	AILKRRHRNGVNVPEIVRLYRPDVISKATGDREAKDCRE*
Ga0066659_111845961	3300006797	Soil	IGHQDFDARHERAILKRRHRNGVNVLEIVRLYRPDVISKATGDREAKDCRK*
Ga0075428_1007064881	3300006844	Populus Rhizosphere	RHERAILKRGHRNSVNILEIVGLDRSDVISKATGDREAKDCR*
Ga0099794_103982561	3300007265	Vadose Zone Soil	RHERAILKRRHRNGVNVPQIVRLYRPDVISKATGDREAKDCRK*
Ga0099792_110447911	3300009143	Vadose Zone Soil	DFDARHERAILKRRHRNGVNVPQIVRLYRPDVISKATGDR*
Ga0111538_103646193	3300009156	Populus Rhizosphere	DQRIGHQNFDARHECAILKSRHRYGVNVPEIVRLYRSDVISKTTGDREAKDCRK*
Ga0105249_108696502	3300009553	Switchgrass Rhizosphere	ILERGHRNAVNVPKIVRLYRPDVISKATGDREAKDCR*
Ga0126380_116719182	3300010043	Tropical Forest Soil	LELFDHRVSDQNFDTRHERAILKRRHRYGVDVSEIVRFYRPDVIAKATRSREAEDCRK*
Ga0134126_103238883	3300010396	Terrestrial Soil	LKRGHRNAVNVPEIVGLYRADVISKATGDREAKDCR*
Ga0126383_118532672	3300010398	Tropical Forest Soil	ELLDQRIGHQNFDARHECAILKSRHRYAVNVPQIVRLYRSDVVSKATGEREAKDCRK*
Ga0134122_117288391	3300010400	Terrestrial Soil	FDARHQRPILKRGHRNAVNVPEIVRLYRPDVISKATGDREAKDCRE*
Ga0137364_102896781	3300012198	Vadose Zone Soil	FDARYKRTIPKRRHRNGVNVAQIVRLYRTDVIAKATGDREAKDCRE*
Ga0137381_107066061	3300012207	Vadose Zone Soil	GHQDFDARHERAILKRRHRNGVNVPEIVRLYRPDVIPKATGDREAKDCRE*
Ga0137378_106325522	3300012210	Vadose Zone Soil	IRHQNFDARYKRTIPKRRHRNGVNVAQIVRLYRTDVIAKATGDREAKDCRE*
Ga0137385_104437422	3300012359	Vadose Zone Soil	FDARHERAILERRHRNAVDVPEIVRLYRPDVIPKATGDREAKDCRE*
Ga0137398_109744382	3300012683	Vadose Zone Soil	AILLELFDHRIGHQDFDARHERAILKRRHRNGVNVPEIVRLYRPDVISKATGDR*
Ga0137397_108437222	3300012685	Vadose Zone Soil	KRAILLELFDHRIGHQDFDARHERAILKRRHRNGVNVPEIVRLYRPDVISKATGDR*
Ga0137419_107698922	3300012925	Vadose Zone Soil	AILLELFDHRIGHQDFDARHERAILKRRHRNGVNVPEIVRLYRPDVIPKATGDREAKNCRE*
Ga0137404_101974633	3300012929	Vadose Zone Soil	RQCDGVNVAEIVRLYRPDVIAKATGDRKAKDCRK*
Ga0137410_116859621	3300012944	Vadose Zone Soil	HQDFDARHERAILKRRHRNGVNVLEIVRLYRPDVIPKATGDREAKDCRE*
Ga0126375_104429662	3300012948	Tropical Forest Soil	RISHQNFDAWHERAILKRGHRNSVNIPEVVRLYRPNVISKAAGDR*
Ga0164300_108671671	3300012951	Soil	ILKRRHRNGVNVPEIVRLYRPDVISKATGDREAKDCRE*
Ga0126369_124309792	3300012971	Tropical Forest Soil	NFDARQERAIPKIRHCYSVNVPQIVRLYRSDVVAKATGER*
Ga0157376_102386332	3300014969	Miscanthus Rhizosphere	RYQRSILKRGHRNTVNVLEIVRLYRSDVISKATGDREAKDCRK*
Ga0137405_11387427	3300015053	Vadose Zone Soil	QNFDARHERAILKRRQCDGVNVAEIVRLYRPDVIAKATGDRKAKDCRK*
Ga0173483_103546042	3300015077	Soil	ILKSRHRYAVNVSQIVRLYRSDVVSKATGEREAKDGRK*
Ga0173478_103130772	3300015201	Soil	GIGDQDFDARHQRAILERGHRNAVNVPEIVRLYRPDVISKATGDREAKDCR*
Ga0182007_100330573	3300015262	Rhizosphere	IRHQDFDPRHQRAILERGHRNAVNVAEVIRLYRPNVISKATGDREAKDGR*
Ga0132258_107600981	3300015371	Arabidopsis Rhizosphere	ILLKLFDHRISHQDFDTRYQRAILERGHRNTVNVPEIVRLYRPNVISKATGDREANDCRK
Ga0132255_1003743473	3300015374	Arabidopsis Rhizosphere	ILLKLFDHRISHQDFDTRYQRAILERGHRNTVNVPEIVRLYRPNMISKATGDREANDCRK
Ga0132255_1019557392	3300015374	Arabidopsis Rhizosphere	ELFNERIGHQDFDARHQRPILKRGHRNAVNVPEIVRLYRADVISKAPRDREAKDCRE*
Ga0132255_1021437481	3300015374	Arabidopsis Rhizosphere	ERAILKRWHRNGVNVPEIVRLYRPDVIPKATGDREAKDCRE*
Ga0182033_117913321	3300016319	Soil	ILLELLDQRIGHQNFDARHESAILKRRHRNAVNISQIVRLYRPDVITKATGNREAKDCRK
Ga0182035_118700172	3300016341	Soil	KSRHRYGVNVPEIVRFYRSDVISKTTGDREAKDCRK
Ga0182032_101251522	3300016357	Soil	HEGAILKRRHRNAVNISQIVRLYRPDVITKATGNREAKDCRK
Ga0182040_101066972	3300016387	Soil	AILLELLDQRIGHQNFDARHESAILKRRHRNAVNISQIVRLYRPDVITKATGNREAKDCR
Ga0184621_101941182	3300018054	Groundwater Sediment	FDHRIGHQDFDARHERAILKRRHRNGVNVPEIVRLYRPDVISKATGDREAKDCRE
Ga0184618_102365422	3300018071	Groundwater Sediment	RHERAILKRRHRNGVNVPEIVRLYRPDVIPKATGHREAKDCRE
Ga0184640_101768542	3300018074	Groundwater Sediment	HQDFDARHERAILKRRHRNGVNVPEIVRLYRPDVIPKATGNREAKDCRK
Ga0066667_115398732	3300018433	Grasslands Soil	AVLLELFDHCIGHQDFDARHERAILKRRHRNGVNVPQIVRLYRPDVISKATGDREAKDCR
Ga0066662_129679071	3300018468	Grasslands Soil	NFDARYKRSIPKRRHGNGVNVAQIVRLYRTDVIAKATGDCEAKDCRE
Ga0066669_116118422	3300018482	Grasslands Soil	ELFDHCIGHQDFDARHERAILERRHRNAVNVPEIVRLYRPDVIPKATGDREAKDCRE
Ga0173482_100811752	3300019361	Soil	DARHQRAILERGHRNAVNVPKIVRLYRPDVISKATGDREAKDCR
Ga0193704_10130511	3300019867	Soil	SAILLELFNHCIGHQDFDARHQRAILKRGHRNGVNVPEIVRLYRPDVISKAPGDREAKDCRE
Ga0193701_10913642	3300019875	Soil	LFDHRIGHQDFDARHERAILKRRHRNGVNVPEIVRLYRPDVIPKATGDREAKDCRE
Ga0193703_10078471	3300019876	Soil	ILLELFNHCIGHQDFDARHQRAILKRGHRNGVNVPEIVRLYRPDVISKAPGDREAKDCRE
Ga0193722_11367772	3300019877	Soil	FDHRIGHQDFHARHERAILKRRHRNGVNVPEIVRLYRPDVIPKATGDREAKDCRE
Ga0193713_10316521	3300019882	Soil	FDHRIGHQDFDARHQRAILKRWHRDGVNVPEIVRLYRPDVIAKATGDCEAKDSRK
Ga0193696_10846212	3300020016	Soil	NYRIGHQDFDARHQRPILKRGHRNAVNVPEIVRLYRPDVISKATGDREAKDCRE
Ga0126371_110661292	3300021560	Tropical Forest Soil	DHRISHQNFDAWHERAILKRGHRNSVNIPEVVRLYRPNVISKAAGDR
Ga0224452_11131242	3300022534	Groundwater Sediment	DFDARHKRAILKRRHRNGVNVPEIVRLYRPDVIPKATGDREAKDCRE
Ga0222622_111640411	3300022756	Groundwater Sediment	IGHQNFDARHERAILKRGHRNGVNVPEIVRLYRPDVIPKATGDREAKDCRK
Ga0247802_10310621	3300023077	Soil	IGDQDLDARHQRAILERGHRNAVNVPKIVRLYRPDVISKATGDREAKDCR
Ga0247794_100661871	3300024055	Soil	AILLELLDHGIGDQDFDARHQRAILERGHRNAVNVPEIVRLYRPDVISKATGDREAKDCR
Ga0207693_110277692	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ERAILKRRHRNGVNVPEIVRLYRPDVIPKATGDREAKDCRE
Ga0207659_101509681	3300025926	Miscanthus Rhizosphere	HGIGDQDLDARHQRAILERGHRNAVNVPKIVRLYRPDVISKATGDREAKDCR
Ga0207659_110982672	3300025926	Miscanthus Rhizosphere	FDTRHQRAILKRRHRNAVNVSQIVRLYRPDVIPKATGEREAKDCRE
Ga0207665_105157002	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RAILKRRHRNGVNVPEIVRLYRPDMISKATGDREAKDCRE
Ga0207661_109736972	3300025944	Corn Rhizosphere	SAILLELLDHGIGDQDFDARHQRAILERGHRNAVNVPKIVRLYRPDVISKATGDREAKDC
Ga0207658_116018191	3300025986	Switchgrass Rhizosphere	FDARHERPILKRGHRNGVNVPEIVRLYRPDVVAKATGDCEAKDCRK
Ga0209238_11950981	3300026301	Grasslands Soil	ILKRGHRNRVDVAQIVWLYRPYVVAKATRNREAADCRK
Ga0209268_11479391	3300026314	Soil	HQDFDARHERAILKRRHRNGVNVPQIVRLYRPDVISKATGDREAKDCRK
Ga0257146_10536272	3300026374	Soil	LELFDHRIGHQDFDARYERAILERRHRNGVNVPEIVRLYRPDVIPKATGDREAKDCRE
Ga0257146_10684442	3300026374	Soil	FDARHEGAILKRWHRNRVNIPEIVRLYRPDVISKATGDREAKDCRE
Ga0268266_101906661	3300028379	Switchgrass Rhizosphere	NFDARHQRAILKRRHRNAVNVSQIVRLYRPDVIPKATGEREAKDCRE
Ga0307295_100972172	3300028708	Soil	LFDHRIGHQDFDARHERAILKRRHRNGVNVPEIVRLYRPDVISKATGDREAKDCRE
Ga0307295_101027682	3300028708	Soil	LFNYRIGHQDFDARNQRAILKRGHRDGVNVPEIVRLYRPDVISKATGDREAKDCRE
Ga0307316_102230521	3300028755	Soil	LLELFDHRIGHQDFDARHERAILKRGHRNGVNVPQIVRLYRPDVVAKATGDCKANDCRK
Ga0307294_103046522	3300028810	Soil	KLFNYRIGHQDFDARNQRAILKRGHRDGVNVPEIVRLYRPDVISKATGDREAKDCRE
Ga0307292_100588011	3300028811	Soil	DFDARNQRAIFKRGHRDGVNVPEIVRLYRPHVISKATGDREAKDCRE
Ga0307296_106527932	3300028819	Soil	AILKRGHRNGVNVPEIVRLYRPDVISKAPGDREAKDCRE
Ga0307300_100781861	3300028880	Soil	QDFDARHERAILKRRHRNGVNVPEIVRLYRPDVIPKATGDREAKDCRE
Ga0308181_10699432	3300031099	Soil	AILLELFDHRIGHQDFDARHERAILKRGHRNAVNVPEIVRLYRPDVISKAPGDREAKDCR
Ga0170823_168200601	3300031128	Forest Soil	DFDVRHQRAIGERRHRNTVNVPEIVRLYRPDVISKATGDREAKDCR
Ga0170824_1055092881	3300031231	Forest Soil	QDFDARHERAILKRRHRNGVNVPEIVRLYRPDVISKATGDREAKDCRK
Ga0308194_101450232	3300031421	Soil	RHERAILKRRHRNGVNVPEIVRLYRPDVIPKATGNREAKDCRE
Ga0170820_120732481	3300031446	Forest Soil	QDFDARHERAILKRRHRNGVNVPEIVRLYRPDVISKATGDR
Ga0170820_132542002	3300031446	Forest Soil	AILKRRHRNGVNVPEIVRLYRPDVIAKAPGDREAKDCRE
Ga0310886_110892101	3300031562	Soil	RIGHQDFDARHERAILKRRHRNVVNVPEIVRLYRPDVIPKATGDCEAKDCRK
Ga0310813_106697071	3300031716	Soil	QNFDARHECAILKSRHRYGVNVPEIVRLYRSDVISKTTGDRETEDCRK
Ga0306917_110050252	3300031719	Soil	YEGTIFERRHRNGVDVAEIVRLYRTDVIPKTPRDREAKNCRK
Ga0306917_111583582	3300031719	Soil	DQRIGHQNFDARHECAIFKSRHRYGVNVPEIVRFYRSDVISKTTGDREAKDCRK
Ga0307469_106852341	3300031720	Hardwood Forest Soil	HQDFDARHERAILKRRHRNSVNVPEIVRLYRPDVISKATGDREAKDCRE
Ga0310912_108494042	3300031941	Soil	NFDARHECAIFKSRHRYGVNVPEIVRFYRSDVISKTTGDREAKDCCK
Ga0310916_101454721	3300031942	Soil	QRIGHQNFDARHECAIFKSRHRYGVNVPEIVRFYRSDVISKTTGDREAKDCRK
Ga0307472_1008499682	3300032205	Hardwood Forest Soil	HRISHQDFDAWHEGAILKRGHRNSVNVPEVVRFYRPNVISKATGDREAKDCRK
Ga0310810_105012451	3300033412	Soil	ELIDHRIGHQDFDARHERAILKRRHRNGVNVPEIVRLYRPDVIPKATGDREAKDCRE

Hidden Markov Model


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