Metagenome / Metatranscriptome Family F095821

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095821
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	54 residues
Representative Sequence	MANESKIETPSTQEEFHTSKTGEDKKLDRIAERAAEKAGKTEKRYDQDHDIFTK
Number of Associated Samples	68
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.38 %
% of genes near scaffold ends (potentially truncated)	32.38 %
% of genes from short scaffolds (< 2000 bps)	80.95 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.524 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (31.429 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.048 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.37% β-sheet: 0.00% Coil/Unstructured: 64.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01523	PmbA_TldD	47.62
PF07690	MFS_1	1.90
PF13855	LRR_8	0.95
PF00704	Glyco_hydro_18	0.95
PF01381	HTH_3	0.95
PF00857	Isochorismatase	0.95
PF12802	MarR_2	0.95
PF01797	Y1_Tnp	0.95
PF09285	Elong-fact-P_C	0.95
PF05977	MFS_3	0.95
PF13472	Lipase_GDSL_2	0.95
PF13567	DUF4131	0.95
PF00834	Ribul_P_3_epim	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	47.62
COG0036	Pentose-5-phosphate-3-epimerase	Carbohydrate transport and metabolism [G]	0.95
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.95
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.95
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.95
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.48 %
Unclassified	root	N/A	29.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.48 %
Unclassified	root	N/A	29.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.52 %
Unclassified	root	N/A	29.52 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	19.05 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.62 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	19.05 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.67 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.95 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	19.05 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.67 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.95 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	19.05 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.67 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.95 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	19.05 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.95 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.95 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	19.05 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	0.95 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.95 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	19.05 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	0.95 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.95 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Chthoniobacter flavus Ellin428	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	19.05 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	0.95 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.95 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10327347	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	889	Open in IMG/M
3300004082\|Ga0062384_100875403	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005537\|Ga0070730_10004769	All Organisms → cellular organisms → Bacteria	11802	Open in IMG/M
3300005591\|Ga0070761_11079578	Not Available	511	Open in IMG/M
3300005602\|Ga0070762_10588286	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005602\|Ga0070762_10760902	Not Available	653	Open in IMG/M
3300005602\|Ga0070762_10762363	Not Available	653	Open in IMG/M
3300005994\|Ga0066789_10043937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	1965	Open in IMG/M
3300006176\|Ga0070765_100021862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4806	Open in IMG/M
3300006176\|Ga0070765_100667091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	982	Open in IMG/M
3300009088\|Ga0099830_11080952	Not Available	665	Open in IMG/M
3300009633\|Ga0116129_1099092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	846	Open in IMG/M
3300010159\|Ga0099796_10040345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	1576	Open in IMG/M
3300010864\|Ga0126357_1022025	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300010865\|Ga0126346_1119809	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300010865\|Ga0126346_1348678	Not Available	510	Open in IMG/M
3300010865\|Ga0126346_1396135	Not Available	541	Open in IMG/M
3300010869\|Ga0126359_1414349	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300010876\|Ga0126361_10215620	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300011270\|Ga0137391_10139510	All Organisms → cellular organisms → Bacteria	2109	Open in IMG/M
3300012205\|Ga0137362_11142406	Not Available	661	Open in IMG/M
3300012925\|Ga0137419_10191587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	1508	Open in IMG/M
3300014489\|Ga0182018_10020522	All Organisms → cellular organisms → Bacteria	4370	Open in IMG/M
3300014489\|Ga0182018_10045819	All Organisms → cellular organisms → Bacteria	2699	Open in IMG/M
3300014489\|Ga0182018_10053008	All Organisms → cellular organisms → Bacteria	2475	Open in IMG/M
3300014489\|Ga0182018_10441351	Not Available	693	Open in IMG/M
3300014495\|Ga0182015_10002391	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22745	Open in IMG/M
3300014495\|Ga0182015_10030428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4180	Open in IMG/M
3300014495\|Ga0182015_10113828	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300014495\|Ga0182015_10237932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	1205	Open in IMG/M
3300014495\|Ga0182015_10680274	Not Available	650	Open in IMG/M
3300014501\|Ga0182024_10020685	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12008	Open in IMG/M
3300014501\|Ga0182024_10046114	All Organisms → cellular organisms → Bacteria	7020	Open in IMG/M
3300014501\|Ga0182024_10114610	All Organisms → cellular organisms → Bacteria	3877	Open in IMG/M
3300014501\|Ga0182024_12750750	Not Available	525	Open in IMG/M
3300014655\|Ga0181516_10766108	Not Available	501	Open in IMG/M
3300018034\|Ga0187863_10130307	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300019786\|Ga0182025_1242295	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	1106	Open in IMG/M
3300019887\|Ga0193729_1111706	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300019887\|Ga0193729_1179393	Not Available	741	Open in IMG/M
3300021180\|Ga0210396_10896192	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300021401\|Ga0210393_11261766	Not Available	593	Open in IMG/M
3300021404\|Ga0210389_11188560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	587	Open in IMG/M
3300021433\|Ga0210391_10450094	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300022529\|Ga0242668_1118117	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300026291\|Ga0209890_10095285	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300026557\|Ga0179587_10275654	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	1080	Open in IMG/M
3300027575\|Ga0209525_1101934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	678	Open in IMG/M
3300027857\|Ga0209166_10028766	All Organisms → cellular organisms → Bacteria	3391	Open in IMG/M
3300027895\|Ga0209624_10035605	All Organisms → cellular organisms → Bacteria	3170	Open in IMG/M
3300027895\|Ga0209624_10517828	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300027908\|Ga0209006_10058681	All Organisms → cellular organisms → Bacteria	3446	Open in IMG/M
3300028747\|Ga0302219_10399301	Not Available	538	Open in IMG/M
3300028773\|Ga0302234_10181188	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	913	Open in IMG/M
3300028773\|Ga0302234_10294357	Not Available	696	Open in IMG/M
3300028775\|Ga0302231_10108009	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300028780\|Ga0302225_10569540	Not Available	526	Open in IMG/M
3300028906\|Ga0308309_10034825	All Organisms → cellular organisms → Bacteria	3497	Open in IMG/M
3300028906\|Ga0308309_10491096	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300028906\|Ga0308309_11086732	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300029882\|Ga0311368_10438497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	953	Open in IMG/M
3300029910\|Ga0311369_11067533	Not Available	633	Open in IMG/M
3300029910\|Ga0311369_11152951	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300029943\|Ga0311340_10353967	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300029943\|Ga0311340_10489497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	1103	Open in IMG/M
3300029999\|Ga0311339_10551701	Not Available	1159	Open in IMG/M
3300029999\|Ga0311339_11027438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	770	Open in IMG/M
3300030007\|Ga0311338_10605891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1126	Open in IMG/M
3300030007\|Ga0311338_11439541	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300030058\|Ga0302179_10248772	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300030399\|Ga0311353_11363858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	579	Open in IMG/M
3300030509\|Ga0302183_10083704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	1259	Open in IMG/M
3300030509\|Ga0302183_10299907	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300030524\|Ga0311357_11391750	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300030568\|Ga0257206_1132755	Not Available	536	Open in IMG/M
3300030580\|Ga0311355_10523018	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300030617\|Ga0311356_11826501	Not Available	541	Open in IMG/M
3300030617\|Ga0311356_11889137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	530	Open in IMG/M
3300030737\|Ga0302310_10185836	All Organisms → cellular organisms → Bacteria → Proteobacteria	1224	Open in IMG/M
3300030739\|Ga0302311_10251188	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	1309	Open in IMG/M
3300031053\|Ga0074018_1026371	Not Available	728	Open in IMG/M
3300031057\|Ga0170834_100929154	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	631	Open in IMG/M
3300031057\|Ga0170834_113813306	Not Available	709	Open in IMG/M
3300031231\|Ga0170824_102160719	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300031231\|Ga0170824_119854621	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	1503	Open in IMG/M
3300031234\|Ga0302325_10601284	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300031234\|Ga0302325_13012744	Not Available	544	Open in IMG/M
3300031236\|Ga0302324_100731570	Not Available	1390	Open in IMG/M
3300031236\|Ga0302324_101864296	Not Available	761	Open in IMG/M
3300031236\|Ga0302324_102011243	Not Available	725	Open in IMG/M
3300031236\|Ga0302324_103346555	Not Available	524	Open in IMG/M
3300031525\|Ga0302326_11320356	Not Available	981	Open in IMG/M
3300031525\|Ga0302326_12214638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	701	Open in IMG/M
3300031708\|Ga0310686_101972085	All Organisms → cellular organisms → Bacteria	2799	Open in IMG/M
3300031708\|Ga0310686_107964926	Not Available	672	Open in IMG/M
3300031708\|Ga0310686_110250613	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300031823\|Ga0307478_10924671	Not Available	730	Open in IMG/M
3300031837\|Ga0302315_10562005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	613	Open in IMG/M
3300032515\|Ga0348332_12530331	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300032515\|Ga0348332_14404784	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300032739\|Ga0315741_10951577	Not Available	761	Open in IMG/M
3300032895\|Ga0335074_10126499	All Organisms → cellular organisms → Bacteria	3296	Open in IMG/M
3300034124\|Ga0370483_0011405	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300034163\|Ga0370515_0005294	All Organisms → cellular organisms → Bacteria	6354	Open in IMG/M
3300034163\|Ga0370515_0005779	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	6050	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.29%
Aquatic	Environmental → Aquatic	4.76%
Human	Host-Associated → Human	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.95%
Peat	Environmental → Terrestrial → Peat	31.43%
Freshwater	Environmental → Aquatic → Freshwater	4.76%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.90%
Digestive System	Host-Associated → Human → Digestive System	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	31.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	19.05%
Loam	Environmental → Terrestrial → Soil → Loam	12.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.90%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	31.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.10%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	15.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.95%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.95%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	31.43%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	8.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.71%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.81%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.86%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.90%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.95%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.95%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030568	Metatranscriptome of decayed wood fungal communities from Pinus contorta in Tenderfoot Creek Experimental Forest, Montana, United States - TCEF3-1 (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031053	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - LB 6 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032739	Forest Soil Metatranscriptomics Site 2 LB Combined Assembly	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_103273472	3300004080	Bog Forest Soil	MADLGNTEKSSTMEEFHTSKTGDDNKLDRAAQEAAEKSGKTQERYDKDHDIFTK*
Ga0062384_1008754031	3300004082	Bog Forest Soil	RRRLKTMGNEAEIKTPKLEEFHTSKTGEDKLIDRTADEAAEKATRTEKRYDQDHDIFTK*
Ga0070730_100047698	3300005537	Surface Soil	MANQPRTEKPPSLEEFHTAKTGQDKKIDRTAEQAAEKAGKTEKHYDQDHDIFTK*
Ga0070761_110795782	3300005591	Soil	MANESKTETPSTQEEFHTSKTGEDKKIDRIAERAAERAGNTEKRYDQDHD
Ga0070762_105882861	3300005602	Soil	NTEKQPSTEEFHTSKTGEDKKLDRTAEQAAEKAGKTEKRYDQDHDIFTK*
Ga0070762_107609022	3300005602	Soil	MANESKIETPQQESHTSKTGEDKKIDRIAERAAEKAGNTEKRYDQNNDIFTK*
Ga0070762_107623632	3300005602	Soil	MPEEPKIETPSTQEELHASKTGQEERIDRLAEQAAEGASKSEKRYDQGHDIFTK*
Ga0066789_100439372	3300005994	Soil	MPNETHVEKPSSTEELHTAKTGQDKKIDRIAEQAAEKASKTEKHYDQNHDIFTK*
Ga0070765_1000218625	3300006176	Soil	EKQPSTEEFHTSKTGEDKKLDRTAEQAAEKAGKTEKRYDQDHDIFTK*
Ga0070765_1006670912	3300006176	Soil	MGNEAEIKTPKLEEFHTSKTGDDELVDRTAEEAAEKAGRTEKRYDQDHDIFTK*
Ga0099830_110809522	3300009088	Vadose Zone Soil	MPNQTRTEKPPSTEEFHTAKTGQDKKIDRTAEQAAEKAGKTEKHYDQDHDIFTK*
Ga0116129_10990922	3300009633	Peatland	MPEESKIETPSTQEEVRTSKTGQEKRIDRIAEQAAEGAGKAEKRYDQNHDIFTK*
Ga0099796_100403451	3300010159	Vadose Zone Soil	MPNQTRTEKPPSTEEFHTAKTGQDKKVDRTAEQAAEKAGKTEKHYDQDHDIFTK*
Ga0126357_10220253	3300010864	Boreal Forest Soil	DQSRIEKPPSIEEFHTSKTGQDKKIDRTAEQAAEKAGKTEKRYDQDHDIFTK*
Ga0126346_11198091	3300010865	Boreal Forest Soil	QTMPNQSRTEKPPSTEEFHTAKTGQDKKIDRTAEQAAEKAGQTEKHYDQDHDIFTK*
Ga0126346_13486781	3300010865	Boreal Forest Soil	QTMADQSRIEKPPSIEEFHTSKTGQDKKIDRTAEQAAEKAGKTEKRYDQDHDIFTK*
Ga0126346_13961352	3300010865	Boreal Forest Soil	MPNQTRIEKPPSTEELNTAKTGQDEKIDRIAEQVAEKASKTEKRYDQDHDIFTK*
Ga0126359_14143491	3300010869	Boreal Forest Soil	MADQSRIEKPPSIEEFHTSKTGQDKKIDRTAEQAAEKAGKTEKRYDQDHDIFTK*
Ga0126361_102156202	3300010876	Boreal Forest Soil	IYGYVHGDQIMPNETHVEKPSSTDEFHTSKTGEDKRLDRTAEEAAEKAGKTEKRYDQDHDIFTK*
Ga0137391_101395104	3300011270	Vadose Zone Soil	MPNQTRTEKPPSTEEFHTAKTGQDKKIDRTAQQAAEKAGKTEKHYDQDHDIFTK*
Ga0137362_111424061	3300012205	Vadose Zone Soil	STEEFHTAKTGQDKKIDRTAEQAAEKAGKTEKHYDQDHDIFTK*
Ga0137419_101915872	3300012925	Vadose Zone Soil	MPNQTRTEKPPSTEEFHTAKTGQDKKIDRTAEQAAEKAGKTEKHYDQDHDIFSK*
Ga0182018_100205222	3300014489	Palsa	MPNQASPNEANIEKPSSLDEFHTSKTGEDKKIDRAAEQAAEKAGKTEKRYDQNHDIFTK*
Ga0182018_100458192	3300014489	Palsa	MPNQASPNLSNVEKPSSLDEFNTSKTGEDKKIDRAADQAAEKAGKTEKRYDQNHDIFTK*
Ga0182018_100530082	3300014489	Palsa	MPSLDNTERSSTTKEFHPSETGEDTKMDRAAEEAAERASKTEKRYDKDHDIFTK*
Ga0182018_104413511	3300014489	Palsa	MPNETHVEKPSTDEFHTSKTGEDKRLDRTAEEAAEKAGKTEKRYDQDHDIFTK*
Ga0182015_100023919	3300014495	Palsa	MADLSNTEKPSTMDNFHTSKTGEDNKLDRAAEEAAEKSSKTQKRYDKDHDIFTK*
Ga0182015_100304284	3300014495	Palsa	MPNETHVEKPSSTEELHTAKTGQDEKIDRIAEQAAEKASKTEKHYDQNHDIFTK*
Ga0182015_101138283	3300014495	Palsa	MGNEAEIKTPKPEEFHTSKTGEDKLIDRTAEEAAEKAERTEKRYDQDHGIFTK*
Ga0182015_102379321	3300014495	Palsa	MPNETHVEKPSTDEFHTSKTGEDKRLDRTAEEAAEKAGKAEKRYDQDHDIFTK*
Ga0182015_106802741	3300014495	Palsa	MPSLDNTERSSTTKEFHPSETGEDTKMDRAAEEAAEKAGKTEKRYDKDHDIFTK*
Ga0182024_1002068511	3300014501	Permafrost	MGNEAEIKTPKPEEFHTSKTGEDKLIDRTAEEAAEKAERTEKRYDQNHDIFTK*
Ga0182024_100461148	3300014501	Permafrost	MPNQASPNLSKVEKPSGLEEFSTSKTGEDKKIDRAAEKAAEEAGKTEKRYDQDHNIFTK*
Ga0182024_101146102	3300014501	Permafrost	MPNETHVEKPSSTDEFHTSKTGEDERLDRTAEEAAEKAGKTEKRYDQGHDIFTK*
Ga0182024_127507501	3300014501	Permafrost	MADESKIETPSTQEEFHTSKTGEDKKIDRIAERAAERAGNTEKRYDQDHDIFTK*
Ga0181516_107661081	3300014655	Bog	MANESKIETPSTQEEFHTSKTGEDKKLDRIAERAAEKAGKTEKRYDQDHDIFTK*
Ga0187863_101303072	3300018034	Peatland	MPEESKIETPSTQEEVRTSKTGQEKRIDRIAEQAAEGAGKAEKRYDQNHDIFTK
Ga0182025_12422952	3300019786	Permafrost	MPNETHVEKPSSTDEFQTSKTGEDERLDRTAEEAAEKAGKTEKRYDQGHDIFTK
Ga0193729_11117062	3300019887	Soil	MPNQSRTEKPPSTEEFHTAKTGQDKKIDRTAEQAAEKAGKTEKHYDQDHDIFTK
Ga0193729_11793932	3300019887	Soil	MPKTVIEKPSSTDEFHTSKTGQDNRIDRTAEEAAEKAGKTEKRFDQEHDIFTK
Ga0210396_108961922	3300021180	Soil	MPDQSRIEKPPSTEEFHTAKTGQDKKIDRTAEQAAEKASKTEKRYDQDHDIFTK
Ga0210393_112617662	3300021401	Soil	MPNQSRIEKPPSIEEFHTSKTGQDKKIDRTAEQAAEKASKTEKRYDQDHDIFTK
Ga0210389_111885601	3300021404	Soil	MCIYLDSEVKTMPEEPRIETPSTQDELHASKTRQEERIDRLAEQAAEGASKAEKRYDQGHDIFTK
Ga0210391_104500942	3300021433	Soil	IETPSTQEELHASKTGQEERIDRLAEQAAEGASKSEKRYDQGHDIFTK
Ga0242668_11181172	3300022529	Soil	LSVHGEQTMANESKIETPQQEFHTSKTGEDKKIDRIAERAAEKAGNTEKRYDQNNDIFTK
Ga0209890_100952852	3300026291	Soil	MPNETHVEKPSSTEELHTAKTGQDKKIDRIAEQAAEKASKTEKHYDQNHDIFTK
Ga0179587_102756542	3300026557	Vadose Zone Soil	MPNQTRTEKPPSTEEFHTAKTGQDKKIDRTAEQAAEKAGKTEKHYDQDHDIFTK
Ga0209525_11019342	3300027575	Forest Soil	MPEESKIETPPTQEESLTSKTVQEKRIDRLAEQVAEGASKSEKRYDQGHDIFTK
Ga0209166_100287661	3300027857	Surface Soil	MANQPRTEKPPSLEEFHTAKTGQDKKIDRTAEQAAEKAGKTEKHYDQDHDIFTK
Ga0209624_100356053	3300027895	Forest Soil	MPEEPKIETPSTQEELHASKTGQEERIDRLAEQAAEGASKSEKRYDQGHDIFTK
Ga0209624_105178282	3300027895	Forest Soil	QTMPNQSNTEKQPSTEEFHTSKTGEDKKIDRTAEQAAEKAGKTEKRYDQDHDIFTK
Ga0209006_100586813	3300027908	Forest Soil	MNTMPEESKIETPPTQEESLTSKTVQEKRIDRLAEQVAEGASKSEKRYDQGHDIFTK
Ga0302219_103993011	3300028747	Palsa	IMPNETHVETPSSTDEFPTSKTGEDKRLDRTAEEAAEKAGKAEKRYDQGHDIFTK
Ga0302234_101811881	3300028773	Palsa	MANESKIETPEQEFHTSETGEDKKIDRIAERAAEKAGNTEKRYDQQNDI
Ga0302234_102943572	3300028773	Palsa	MPEESKIETPSTQEEVHTSKTGQEKRIDRIAEQAAEGAGKAEKRYDQNHDIFTK
Ga0302231_101080091	3300028775	Palsa	MPDQTRIEKTPSTEELNTAKTGQDEKIDRIAEQAAEKASKTEKHYDQNHDIFTK
Ga0302225_105695401	3300028780	Palsa	MADLSNTEKSSTMEEFHTSKTGEDNKLDRAAEEAAEKSSKTQKRYDKDYDIFTK
Ga0308309_100348252	3300028906	Soil	MPNQSNTEKQPSTEEFHTSKTGEDKKLDRTAEQAAEKAGKTEKRYDQDHDIFTK
Ga0308309_104910962	3300028906	Soil	MGNEAEIKTPKLEEFHTSKTGDDELVDRTAEEAAEKAGRTEKRYDQDHDIFTK
Ga0308309_110867321	3300028906	Soil	MANESKIETPQQEFHTSKTGEDKKIDRIAERAAEKAGNTEKRYDQNNDIFTK
Ga0311368_104384972	3300029882	Palsa	MANESKIETPEQEFHTSETGEDKKIDRIAERAAEKAGNTEKRYDQQNDIFTK
Ga0311369_110675332	3300029910	Palsa	MPNETHVETPSSTDEFPTSKTGEDKRLDRTAEEAAEKAGKAEKRYDQGHDIFTK
Ga0311369_111529512	3300029910	Palsa	PSTQEEVHTSKTGQEKRIDRIAEQAAEGAGKAEKRYDQNHDIFTK
Ga0311340_103539672	3300029943	Palsa	THVHGDQIMPNETHVETPSSTDEFPTSKTGEDKRLDRTAEEAAEKAGKAEKRYDQGHDIFTK
Ga0311340_104894971	3300029943	Palsa	MANESKIETPEQEFHTSKTGEDKKIDRIAERAAEKAGNTEKRYDQNNDIFTK
Ga0311339_105517012	3300029999	Palsa	MPNQASPNLSNVEKPSSLDEFNTSKTGEDKKIDRAADQAAEKAGKTEKRYDQNHDIFTK
Ga0311339_110274381	3300029999	Palsa	MPEESKIETPSTQEEVHASQTGQEKRIDRIAEQVAEGAGNAEKRYDQNHDTFTK
Ga0311338_106058911	3300030007	Palsa	MTNQAAPNLGNTEKPSSLDEFHTSKTGEDKELDRVADKAAEKAGKTEKHYDQGHDIFTK
Ga0311338_114395412	3300030007	Palsa	TNMEKSPTMQEFHTSKTGEDNQLDRAAEELAEKSSKTQKRYDKDHDIFTK
Ga0302179_102487721	3300030058	Palsa	MADLSNTEKSSTMEEFHTSKTGEDNKLDRAAEEAAEKSSKTQKRYDKDHDIFTK
Ga0311353_113638582	3300030399	Palsa	MPEESKIETPSTQEEVHASQTGQEKRIDRIAEQVAEGAGNAEKRYDQNHDIFTK
Ga0302183_100837041	3300030509	Palsa	MANESKIETPEQEFHTSETGEDKKIDRIAERAAEKAGNTEKRYD
Ga0302183_102999071	3300030509	Palsa	SKIETPPTQEESPTSKTGQEKRIDRIAEQLAEGAGKAEKRYDQNHDIFTK
Ga0311357_113917501	3300030524	Palsa	ANESKIETPEKEFHTSETAEDKKIDRIAERAAERAGNTEKRYDQNNDIFTK
Ga0257206_11327551	3300030568	Host-Associated	KPPSIEEFHTSKTGQDKKIDRTAEQAAEKAGKTEKRYDQDHDIFTK
Ga0311355_105230182	3300030580	Palsa	ADLSNTEKSSTMEEFHTSKTGEDNKLDRAAEEAAEKSSKTQKRYDKDHDIFTK
Ga0311356_118265012	3300030617	Palsa	MANESKIETPQEEFHTSKTDEDKKIDRIAERAAERAGNTEKRYDQNNDIFTK
Ga0311356_118891371	3300030617	Palsa	IYPGEITMPNQASPNLSNVEKPSSLEDFSTSKTGEDKKIDRAAEQAAEKAGKTEKRYDQNNDIFTK
Ga0302310_101858361	3300030737	Palsa	MADLSNTEKSSTMEEFHTSKTGEDNKLDRAAEEAAEKSSKTQKRYDKDHDI
Ga0302311_102511882	3300030739	Palsa	MANESKIETPEQEFHTSETGEDKKIDRIAERAAEKAGNTEKRYDQNNDIFTK
Ga0074018_10263711	3300031053	Soil	PNEATPNTGNTEKPSSLDEFHTSKTGEDKELDRVAERAAERAGNTEKKYDRDHDIFTK
Ga0170834_1009291541	3300031057	Forest Soil	MPEEPRIETPSTQDELHASKTRQEERIDRLAEQAAEGASKAEKRYDQGHDIFTK
Ga0170834_1138133062	3300031057	Forest Soil	MPNQSRIEKPPSVEEFHTTKTGQDKKIDRTAEQAAEKASKTEKRYDQDHDIFTK
Ga0170824_1021607192	3300031231	Forest Soil	MPEEPRIETPSTQDELHASKTRQEERIDRLAEQAAEGASEAEKRYDQGHDIFTK
Ga0170824_1198546212	3300031231	Forest Soil	MPNQTRVEKPPSLEEFHTAKTGQDKKIDRTAEQAAEKAGKTEKHYDQDHDIFTK
Ga0302325_106012842	3300031234	Palsa	MADESKIETPQEELHTSKTREDKEIDRIAERAAERAGNTEKRYDQGHDIFTK
Ga0302325_130127441	3300031234	Palsa	MADLSNIEKSSATEEFHTSKTGEDKKLDRVAEEAAQKASKTEKRYDKGHDIFTK
Ga0302324_1007315703	3300031236	Palsa	MPNQASPNLSNVEKPSSLEEFNTSKTGEDKKIDRAADQAAEKAGKTEKRYDQNHDIFTK
Ga0302324_1018642962	3300031236	Palsa	MADESKTETPLTPEEVHTSETGEDKRIDRIAEQAAEKAGKTEKRYDQDHDIFTK
Ga0302324_1020112433	3300031236	Palsa	MPSLDNTERSSTTKEFHPSETGEDTKMDRAAEEAAERASKTEKRYDKDHDIFTK
Ga0302324_1033465552	3300031236	Palsa	MANESKIETPEKEFHTSETAEDKKIDRIAERAAERAGNTEKRYDQNNDIFTK
Ga0302326_113203561	3300031525	Palsa	MPNQASPNLSNVEKPSSLEEFNTSKTGEDKKIDRAADQAAEKAGKTEKRYDQNHD
Ga0302326_122146382	3300031525	Palsa	MPEESKIETPSTQEEVHASQTGQEKRIDRIAEQVAEGAGNAEKRYDQNHD
Ga0310686_1019720853	3300031708	Soil	MGNEAEIKTPKLEEFHTSKTGDDNLVDRTADEAAEKATRTEKRYDQDHDIFTK
Ga0310686_1079649262	3300031708	Soil	MANESKIETPEQEFHTSETDEDKKIDRIAERAAEKAGNTEKRYDQNNDIFTK
Ga0310686_1102506132	3300031708	Soil	MANESKTETPSNKEEFHTSKTGEDKKIDRIAERAAEKAGKTENLYDQDHDIFTK
Ga0307478_109246711	3300031823	Hardwood Forest Soil	MPNQTRTEKPPSLEEFHTAKTGQDKKIDRTAEQAAEKAGKTEKHYDRDHDIFTK
Ga0302315_105620051	3300031837	Palsa	MANESKIETPEQEFHTSETGEDKKIDRIAERAAEKAGNTEKR
Ga0348332_125303311	3300032515	Plant Litter	MADLSKTETPTTEEEFHTAKTGEDSRLDRTAERAAEKAGKTERRYDQEHDIFTK
Ga0348332_144047841	3300032515	Plant Litter	ANESKTETPSTQEEFHTSKTGEDKKIDRIAERAAEKAGKTENRYDQDHDIFTK
Ga0315741_109515771	3300032739	Forest Soil	MPNEATPNTGNTEKPSSLDEFHTSKTGEDKELDRVAERAAERAGNTEKKYDRDHDIFTK
Ga0335074_101264992	3300032895	Soil	MADETTIKRPSNLEEFHTSETGEDKKIDRIAEKAAERAGERQKKYDESHDIFTK
Ga0370483_0011405_1464_1661	3300034124	Untreated Peat Soil	MCIYLTSEVKTMPEETKIETPSTQEEVHASKTSQEKRIDRIAEQAAEGAGKAEKRYDQNHDIFTK
Ga0370515_0005294_3333_3494	3300034163	Untreated Peat Soil	MPNETHVEKPSTDEFHTSKTGEDKRLDRTAEEAAEKAGKTEKRYDQDHDIFTK
Ga0370515_0005779_3883_4047	3300034163	Untreated Peat Soil	MPSLDNTERSSTTKEFHPSETGEDTKMDRAAEEAAEKAGKTEKRYDKDHDIFTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095821

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences