NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F095815

Metagenome / Metatranscriptome Family F095815

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095815
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 40 residues
Representative Sequence GPQGSTFVSPSTLPASTASAPLGTSAAGNYYAGSANLG
Number of Associated Samples 87
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.96 %
% of genes near scaffold ends (potentially truncated) 97.14 %
% of genes from short scaffolds (< 2000 bps) 87.62 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (58.095 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(27.619 % of family members)
Environment Ontology (ENVO) Unclassified
(18.095 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.762 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 4.55%    β-sheet: 0.00%    Coil/Unstructured: 95.45%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF02803Thiolase_C 19.05
PF04185Phosphoesterase 6.67
PF00083Sugar_tr 2.86
PF01545Cation_efflux 1.90
PF13365Trypsin_2 1.90
PF02687FtsX 0.95
PF13701DDE_Tnp_1_4 0.95
PF05598DUF772 0.95
PF00210Ferritin 0.95
PF00146NADHdh 0.95
PF02659Mntp 0.95
PF03734YkuD 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0183Acetyl-CoA acetyltransferaseLipid transport and metabolism [I] 19.05
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 6.67
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 1.90
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 1.90
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 1.90
COG0650Formate hydrogenlyase subunit HyfCEnergy production and conversion [C] 0.95
COG1005NADH:ubiquinone oxidoreductase subunit 1 (chain H)Energy production and conversion [C] 0.95
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.95
COG1971Putative Mn2+ efflux pump MntPInorganic ion transport and metabolism [P] 0.95
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.10 %
All OrganismsrootAll Organisms41.90 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005434|Ga0070709_10205018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1398Open in IMG/M
3300005436|Ga0070713_100953424All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300005436|Ga0070713_102084036All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300005436|Ga0070713_102430205Not Available506Open in IMG/M
3300005439|Ga0070711_101545775Not Available579Open in IMG/M
3300005440|Ga0070705_100022691All Organisms → cellular organisms → Bacteria3357Open in IMG/M
3300005578|Ga0068854_102115550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia520Open in IMG/M
3300005602|Ga0070762_10699818Not Available680Open in IMG/M
3300006176|Ga0070765_100083515Not Available2717Open in IMG/M
3300006176|Ga0070765_100458558All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1195Open in IMG/M
3300006804|Ga0079221_10553937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia762Open in IMG/M
3300006804|Ga0079221_11746041All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300006806|Ga0079220_10138576All Organisms → cellular organisms → Bacteria → Terrabacteria group1325Open in IMG/M
3300006806|Ga0079220_11077582Not Available648Open in IMG/M
3300006904|Ga0075424_101675455Not Available674Open in IMG/M
3300007076|Ga0075435_100667752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia902Open in IMG/M
3300007076|Ga0075435_101423660Not Available607Open in IMG/M
3300009523|Ga0116221_1130039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1102Open in IMG/M
3300009623|Ga0116133_1188919Not Available551Open in IMG/M
3300009672|Ga0116215_1162453Not Available990Open in IMG/M
3300009672|Ga0116215_1520219Not Available514Open in IMG/M
3300009698|Ga0116216_10521357Not Available718Open in IMG/M
3300010375|Ga0105239_11215173Not Available869Open in IMG/M
3300010379|Ga0136449_102061392Not Available839Open in IMG/M
3300010401|Ga0134121_11185660Not Available762Open in IMG/M
3300010880|Ga0126350_10113069All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300012189|Ga0137388_10730199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia919Open in IMG/M
3300012205|Ga0137362_10370929All Organisms → cellular organisms → Bacteria → Terrabacteria group1240Open in IMG/M
3300012357|Ga0137384_10109578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2306Open in IMG/M
3300012359|Ga0137385_11628205Not Available509Open in IMG/M
3300012925|Ga0137419_11542463Not Available564Open in IMG/M
3300012961|Ga0164302_10086158Not Available1691Open in IMG/M
3300013296|Ga0157374_10642465Not Available1073Open in IMG/M
3300013308|Ga0157375_10548873All Organisms → cellular organisms → Bacteria → Terrabacteria group1317Open in IMG/M
3300014487|Ga0182000_10057365Not Available1187Open in IMG/M
3300016270|Ga0182036_11626669Not Available544Open in IMG/M
3300016341|Ga0182035_10934224Not Available766Open in IMG/M
3300017928|Ga0187806_1208799Not Available664Open in IMG/M
3300017934|Ga0187803_10387907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium565Open in IMG/M
3300017959|Ga0187779_10138540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1493Open in IMG/M
3300017995|Ga0187816_10162523All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia967Open in IMG/M
3300018037|Ga0187883_10369912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia733Open in IMG/M
3300018046|Ga0187851_10140956Not Available1466Open in IMG/M
3300018046|Ga0187851_10339381Not Available866Open in IMG/M
3300018058|Ga0187766_10035416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae2906Open in IMG/M
3300018058|Ga0187766_10727521Not Available687Open in IMG/M
3300018085|Ga0187772_11003690All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia610Open in IMG/M
3300018085|Ga0187772_11417434Not Available516Open in IMG/M
3300020580|Ga0210403_10937237Not Available681Open in IMG/M
3300021180|Ga0210396_10256408All Organisms → cellular organisms → Bacteria1554Open in IMG/M
3300021403|Ga0210397_10249673All Organisms → cellular organisms → Bacteria → Terrabacteria group1287Open in IMG/M
3300021404|Ga0210389_10687980Not Available801Open in IMG/M
3300021404|Ga0210389_11191435Not Available586Open in IMG/M
3300021405|Ga0210387_10194853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1755Open in IMG/M
3300021405|Ga0210387_11815409Not Available513Open in IMG/M
3300021433|Ga0210391_10639754Not Available834Open in IMG/M
3300021474|Ga0210390_10334488Not Available1282Open in IMG/M
3300021474|Ga0210390_11127260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium636Open in IMG/M
3300024286|Ga0247687_1076870Not Available515Open in IMG/M
3300024288|Ga0179589_10015710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2394Open in IMG/M
3300024288|Ga0179589_10434650Not Available604Open in IMG/M
3300024290|Ga0247667_1064583Not Available675Open in IMG/M
3300025927|Ga0207687_10161588Not Available1720Open in IMG/M
3300025945|Ga0207679_11669703Not Available583Open in IMG/M
3300026322|Ga0209687_1096939Not Available958Open in IMG/M
3300027725|Ga0209178_1201491Not Available705Open in IMG/M
3300027775|Ga0209177_10002173All Organisms → cellular organisms → Bacteria3646Open in IMG/M
3300027895|Ga0209624_10042734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2895Open in IMG/M
3300028747|Ga0302219_10320493Not Available604Open in IMG/M
3300028775|Ga0302231_10419785Not Available564Open in IMG/M
3300028806|Ga0302221_10147306Not Available1037Open in IMG/M
3300028906|Ga0308309_11167027Not Available665Open in IMG/M
3300030618|Ga0311354_11302528Not Available652Open in IMG/M
3300030618|Ga0311354_11735460Not Available544Open in IMG/M
3300030739|Ga0302311_10191384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1558Open in IMG/M
3300030741|Ga0265459_10818742Not Available931Open in IMG/M
3300031027|Ga0302308_10740136Not Available553Open in IMG/M
3300031234|Ga0302325_10360419Not Available2301Open in IMG/M
3300031234|Ga0302325_10770372Not Available1366Open in IMG/M
3300031236|Ga0302324_101467889All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria888Open in IMG/M
3300031525|Ga0302326_13047551Not Available570Open in IMG/M
3300031546|Ga0318538_10245644All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia961Open in IMG/M
3300031713|Ga0318496_10638516Not Available588Open in IMG/M
3300031751|Ga0318494_10722753All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia583Open in IMG/M
3300031765|Ga0318554_10619372Not Available609Open in IMG/M
3300031768|Ga0318509_10005093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5211Open in IMG/M
3300031770|Ga0318521_10194356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1170Open in IMG/M
3300031778|Ga0318498_10264021Not Available775Open in IMG/M
3300031778|Ga0318498_10374750Not Available634Open in IMG/M
3300031798|Ga0318523_10285063Not Available824Open in IMG/M
3300031821|Ga0318567_10258187Not Available979Open in IMG/M
3300031823|Ga0307478_10051443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3057Open in IMG/M
3300031893|Ga0318536_10549791Not Available579Open in IMG/M
3300031962|Ga0307479_10022267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5995Open in IMG/M
3300032010|Ga0318569_10223902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium873Open in IMG/M
3300032064|Ga0318510_10416682Not Available574Open in IMG/M
3300032091|Ga0318577_10399254Not Available657Open in IMG/M
3300032261|Ga0306920_102083035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia792Open in IMG/M
3300032261|Ga0306920_103971554Not Available537Open in IMG/M
3300032782|Ga0335082_11281016All Organisms → cellular organisms → Bacteria → Terrabacteria group602Open in IMG/M
3300032828|Ga0335080_10675930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Gandjariella → Gandjariella thermophila1078Open in IMG/M
3300032898|Ga0335072_10441698All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1376Open in IMG/M
3300033134|Ga0335073_10128315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3243Open in IMG/M
3300033290|Ga0318519_10442207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia778Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil27.62%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa10.48%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.67%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil5.71%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.71%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.76%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.81%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.86%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.86%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.86%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.90%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.95%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.95%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.95%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.95%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300022522Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024286Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300028747Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028775Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2EnvironmentalOpen in IMG/M
3300028806Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300031027Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070709_1020501813300005434Corn, Switchgrass And Miscanthus RhizosphereTGMAVQADASGSKFVAPATLPADTASAPLGTSAVGNYNAA*
Ga0070713_10095342413300005436Corn, Switchgrass And Miscanthus RhizosphereAVQAGPQGSTFVPPDSLPADTATAPLETSAHGNYYAGTANIG*
Ga0070713_10208403613300005436Corn, Switchgrass And Miscanthus RhizosphereTGQAVQAGPQGSTFVDPDSLPADTASAPLETSAPGNYYAHTANIG*
Ga0070713_10243020523300005436Corn, Switchgrass And Miscanthus RhizosphereEAVQAGPQGSTFVDPSSLPASTASAPLGTSATGNYFAGAANIR*
Ga0070711_10154577523300005439Corn, Switchgrass And Miscanthus RhizosphereTGEAVQAGPQGSTFVDPSSLPASTASAPLGTSATGNYFAGAANIR*
Ga0070705_10002269113300005440Corn, Switchgrass And Miscanthus RhizosphereSATGEAVQAGPQGSTFVSPDTLPASTASAPLGTSAHGNYYAGTANLG*
Ga0068854_10211555023300005578Corn RhizosphereVQAGPQGSTFVDPSSLPASTASAPLGTSATGNYFAGAANIR*
Ga0070762_1069981813300005602SoilVQAGPQGSTFVSPSSLPTSSASAPLGTSAAGNYYAGSANLG*
Ga0070765_10008351533300006176SoilGSQFVAPSSLPADTASSPLDTSAAGNYYAGSANIATAG*
Ga0070765_10045855813300006176SoilGSALGEAVEAGPQGSQFVSPSALPADTAAAPLGTSAAGNYFAGSANIG*
Ga0079221_1055393723300006804Agricultural SoilVQAGPQGSTFVSPDTLPVSTASAPLGTSAHGNYYARTANLG*
Ga0079221_1174604123300006804Agricultural SoilVQAGPQGSTFVDPSSLPASTASAPLGTSVAGNYFAGSANIG*
Ga0079220_1013857613300006806Agricultural SoilPQGSTFVAPDTLPASTASAPLGTSASGNYYAGTANLG*
Ga0079220_1107758223300006806Agricultural SoilGSTFVPPDSLPADTATAPLETSAHGNYYAGTANIG*
Ga0075424_10167545513300006904Populus RhizosphereGPQGSTFVAPDSLPADTANSPLETSAHGNYYANTANIR*
Ga0075435_10066775223300007076Populus RhizosphereVQAGPQGSTFVSPDTLPASTASAPLGTSASGNYYAGTANLG*
Ga0075435_10142366023300007076Populus RhizosphereAVQAGPQGSTFVSPDTLPASTASAPLGTSASGNYYAGTANLG*
Ga0116221_113003913300009523Peatlands SoilQGSEFVSPSLLPADTASAPLGTSAAGNYYAGSANLG*
Ga0116133_118891923300009623PeatlandSALGEAVAAGPQGSTFVSRSSLPADTATAPLQTSAGGNYFAGAPSLG*
Ga0116215_116245313300009672Peatlands SoilAGPQGSTFVSPSSLPADTATAPLQTSATGNYYAGAANLLG*
Ga0116215_152021923300009672Peatlands SoilGPQGSTFVSPSSLPADTATAPLQTSATGNYYAGAANLLG*
Ga0116216_1052135723300009698Peatlands SoilPQGSTFVSPSSLPADTATAPLGTSASGNYYAGAANLG*
Ga0105239_1121517323300010375Corn RhizosphereVQAGPQGSTFVDPSSLPASTASAPLSTSATGNYFAGAANIR*
Ga0136449_10206139223300010379Peatlands SoilPQGSTFVSPSSLPPDTATAPLETSESGNWYANTSNIATIGSIG*
Ga0134121_1118566023300010401Terrestrial SoilEAVQAGPQGSTFVDPSSLPASTASAPLGTSVTGNYFAGAANIG*
Ga0126350_1011306913300010880Boreal Forest SoilQGSTFVSPSSLPADTATAPLETSASGNYYAGAANILG*
Ga0137388_1073019923300012189Vadose Zone SoilAGPQGSTFVSPSSLPADTASAPVETSAAGNYYAGSANLG*
Ga0137362_1037092913300012205Vadose Zone SoilGSTFVSPSSLPASTASAPLGTSAAGNYYASSANLG*
Ga0137384_1010957813300012357Vadose Zone SoilGSTFVSPTSLPASTATAPLGTSASGNYFAGAANLR*
Ga0137385_1162820513300012359Vadose Zone SoilSTFVDPSSLPASTASAPLGTSAAGNYFAGSANLG*
Ga0137419_1154246323300012925Vadose Zone SoilGPQGSTFVSPSTLPASTASAPLGTSAAGNYYAGSANLG*
Ga0164302_1008615813300012961SoilQGSTFVSPDTLPASTASAPVGTSAHGNYYAGTANLG*
Ga0157374_1064246513300013296Miscanthus RhizosphereEAVQAGPQGSTFVSPSTLPDSTASAPVGTSAHGNYFAGSANLG*
Ga0157375_1054887313300013308Miscanthus RhizosphereSTFVSPSTLPDSTASAPVGTSAHGNYFAGSANLG*
Ga0182000_1005736513300014487SoilGPQGSTFVDPSSLPASTATAPLGTSASGNYFARTANIR*
Ga0182036_1162666913300016270SoilAGPQGSTFVSPSSLTADTVSAPLQTSVAGNYYAGSANIG
Ga0182035_1093422423300016341SoilPQGSKFVSPSSLPASTAAAPLGNSVAGNYYAGSANLGVIQG
Ga0187806_120879913300017928Freshwater SedimentMQAGPQGSQFVSPSSLPADTAASPLATSAAGNYYAGSANIG
Ga0187803_1038790723300017934Freshwater SedimentVQAGPQGSTFVSPSSLPADTASAPLGTSAPGNYYAGTANIG
Ga0187779_1013854023300017959Tropical PeatlandGPQGSEFVSPSSLPADTASAPLETAAAGNYYAGSANLG
Ga0187816_1016252323300017995Freshwater SedimentPQGSEFVSPSALPADTASAPLGTSAAGNYFAGSADLG
Ga0187883_1036991213300018037PeatlandMAVQAGPQGSTFVDPSSLPADTATAPLETSATGNYFAGSANIG
Ga0187851_1014095613300018046PeatlandAGPQGSTFVSPSSLPADTATAPVQTSAAGNYYIGAPSLG
Ga0187851_1033938123300018046PeatlandGEAVEAGPQGSTFVSPSSLPADTASAPLQTSAAGNYFAGAPSLG
Ga0187766_1003541613300018058Tropical PeatlandGSALGEAVVAGPRGSKFVSPSSLPGDPTTAPLGTSAAGNYYAGTANMG
Ga0187766_1072752123300018058Tropical PeatlandSALGQAVQAGPQGSQFVSPSSLPPDTATAPLGTSEAGNYDAYSGNIG
Ga0187772_1100369023300018085Tropical PeatlandGEAVEAGPQGSQFVSPSSLPPDTATAPLGTSAAGNYYVGTANIG
Ga0187772_1141743413300018085Tropical PeatlandSALGLAVEAGPQGSRFVPPSSLPADTATAPLGTAAAGNYFAGSPNIG
Ga0210403_1093723723300020580SoilEAVQAGPQGSTFVSPSSLAASTASAPLGTSAAGNYFAGSANLR
Ga0210396_1025640813300021180SoilQGSQFVSPSSLPADTASSPLETSATGNYYAGSANIG
Ga0210397_1024967313300021403SoilQAGPQGSHFVSPSSLSADTASSPLETSATGNYDAGSANIG
Ga0210389_1068798023300021404SoilSATGEVVQAGPQGSTFVDPSSLPASTASAPLGTSATGNYFAGSANVG
Ga0210389_1119143513300021404SoilTGDAVQAGPQGSTFVSPSTLPDSTASAPLGTSAHGNYYAGTANLG
Ga0210387_1019485323300021405SoilTAGPQGSTFVAPSSLPADTATAPLGTSAIGNYYAGSANLG
Ga0210387_1181540923300021405SoilQGSQFVSPSSLSADTASSPLSTSATGNYYAGSANVASVG
Ga0210391_1063975413300021433SoilGSQFVSPASLPADTASAPLGTSVAGNYYAGTSNLS
Ga0210390_1033448813300021474SoilSALGEAVEAGPQGSQFVSPASLPADTASAPLGTSVAGNYYAGTSNLE
Ga0210390_1112726013300021474SoilGSQFVSPSSLPADTASSPLETSAAGNYYAGSANIG
Ga0242659_112339023300022522SoilVKGSALGMAGQAGPQGSHFVSPWLLPADTASSPLETSATGNCDA
Ga0247687_107687013300024286SoilGPQGSTFVSPDTLPASTASAPVGTSAHGNYYAGTANLG
Ga0179589_1001571023300024288Vadose Zone SoilEAVQAGPQGSTFVSPSSLPASAASAPLGTSAAGNYFAGSANLR
Ga0179589_1043465013300024288Vadose Zone SoilQGSTFVSPDTLPASTVSAPLGTSAHGNYYAGTANLG
Ga0247667_106458323300024290SoilQGSTFVSPDTLPASTASAPVGTSAHGNYYAGTANLG
Ga0207687_1016158813300025927Miscanthus RhizosphereAVQAGPQGSTFVSPDTLPASTASAPLGTSAHGNYYAGTANLG
Ga0207679_1166970313300025945Corn RhizosphereGSTFVSPDTLPVSTASAPLGTSAHGNYYAGTANLG
Ga0209687_109693913300026322SoilGSTFVSPSSLPASTASAPLGTSASGNYFAGSANIR
Ga0209178_120149113300027725Agricultural SoilGPQGSTFVSPSTLPASTASAPLGTSAHGNYYARTANLG
Ga0209177_1000217313300027775Agricultural SoilGQAVQAGPQGSTFVAPDTLPASTASAPLGTSASGNYYAGTANLG
Ga0209624_1004273473300027895Forest SoilDGSQFVSPSSLPADTAAAPLERSATGNYYAGSANIATVS
Ga0302219_1032049313300028747PalsaSALDEAVEAGPQGSTFVSPSSLPADTAAAPLQTSAAGNYYAGAAALG
Ga0302231_1041978513300028775PalsaSALDEAVEAGPQGSKFVSPSSLPADTGTTPLQTSAAGNYYAGTPALG
Ga0302221_1014730613300028806PalsaGPQGSQFVSPSSLPADIASSPLETSATGNYYAGTANIANVG
Ga0308309_1116702723300028906SoilGPQGSQFVAPSSLPADTASSPLDTSAAGNYYAGSANIATAG
Ga0311354_1130252813300030618PalsaGSTFVSPSSLPADNATAPLATSASGNYYAGAANLLG
Ga0311354_1173546013300030618PalsaQFVSPSSLPADTASSPLETSATGNYYAGTANIANVG
Ga0302311_1019138413300030739PalsaGPQGSQFVSPSSLPADTASSPLETSATGNYYAGTANIANVG
Ga0265459_1081874223300030741SoilVEAGPQGSKFVSPSSLPADTGTAPLQNSAAGNYYAGTPALG
Ga0302308_1074013613300031027PalsaGSTFVSRSSLPADTATAPLQTSAGGNYFAGAPSLG
Ga0302325_1036041913300031234PalsaGSTFVSPASLPADTAAAPLSTSAAGNYYAGAAWPT
Ga0302325_1077037223300031234PalsaVQAGPQGSTFVSPSSLPADTATAPGQTSAAGNYYAGAAALG
Ga0302324_10146788913300031236PalsaPQGSTFVSPSSLPADTATAPRQTSAAGNYFAGAAALG
Ga0302326_1304755123300031525PalsaQGSTFVSPSSLPADTATAPRQTSAAGNYFAGAAALG
Ga0318538_1024564413300031546SoilSQYLRGSALGKAVEAGPRGSRFVSPASLPPDAATAPLGTSEAGNFGAGAANIG
Ga0318496_1063851613300031713SoilVQAGPQGSTFVSPSSLASSTASAPLGTSATGNFYAGSANLG
Ga0318494_1072275313300031751SoilVQAGPQGSEFVSPSSLPADTASAPLETSAAGNYYAGSANIG
Ga0318554_1061937213300031765SoilVQAGPQGSTFVSPSSLPASTASVPLGTSATGNFYAGSANLG
Ga0318509_1000509313300031768SoilFVSPSSLPADTASAPLETSAAGNYYAGSANIGSLTG
Ga0318521_1019435613300031770SoilTFSQYLRGSALGKAVEAGPRGSRFVSPASLPPDTATAPLGTSEAGNFGAGAANIG
Ga0318498_1026402123300031778SoilQAGPQGSTFVSPSSLAPSTASAPLGTSATGNFYAGSANLG
Ga0318498_1037475013300031778SoilGPQGSTFVSPSSLPASTASVPLGTSASGNYYAGSANLG
Ga0318523_1028506313300031798SoilGMAVQAGPQGSEFVSPSSLPADTASAPLETSVAGNYYAGSANIGSLTG
Ga0318567_1025818713300031821SoilVRAGPQGSTFVSPSSLPASIAAAPLGTSAAGNYYAGSANLGVVQG
Ga0307478_1005144313300031823Hardwood Forest SoilVEAGPSGSKFVSPSSLPADTATAPVGTSAAGNYFAG
Ga0318536_1054979113300031893SoilGSTFVDPSSLPASTASAPLGTSARGNYFAGTANLG
Ga0307479_1002226753300031962Hardwood Forest SoilGRAVVAGPQGSEFVSPSAAPPSTATAPQGTSAPGNYNAGAA
Ga0318569_1022390213300032010SoilGPQGSTFVSPSSLPASTASVPLGTSATGNFYAGSANLG
Ga0318510_1041668223300032064SoilVSPSSLPADTASAPLETSAAGNYYAGSANIGSLTG
Ga0318577_1039925413300032091SoilGQAVQAGPQGSTFVSPSSLPASTASVPLGTSATGNFYAGSANLG
Ga0306920_10208303523300032261SoilVQAGPQGNTFVSPSSLPASTASVPLGTSATGNFYAGTANLG
Ga0306920_10397155413300032261SoilGSIFVSPSSLPVDTASAPLGTSASGNYYAGSANLG
Ga0335082_1128101613300032782SoilSATGEAVQAGPQGSTFVSPSSLPASTASVPLGTSATGNFYAGSANLG
Ga0335080_1067593013300032828SoilGSTFVSPSSLPASTASAPLGTSASGNYYADSGNLG
Ga0335072_1044169813300032898SoilVEAGPSGSTFVSPASLPADTASSPLETSAYGNYDAGTANISG
Ga0335073_1012831513300033134SoilGPQGSTFVSPSSLPADTATVPLGTSAPGNYYAGSANLGVIG
Ga0318519_1044220713300033290SoilAGPQGSEFVSPSSLPADTASAPLETSAAGNYYAGSANLG


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