Metagenome / Metatranscriptome Family F095807

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F095807
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	153 residues
Representative Sequence	VLVDIVVVVVALAAAAGLGFWIRRAASCGRTIDVPAGEFGGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGDAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVEELYRTSGQG
Number of Associated Samples	76
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.24 %
% of genes near scaffold ends (potentially truncated)	28.57 %
% of genes from short scaffolds (< 2000 bps)	69.52 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (77.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (20.952 % of family members)
Environment Ontology (ENVO)	Unclassified (46.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.70% β-sheet: 29.73% Coil/Unstructured: 47.57%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF06283	ThuA	8.57
PF13472	Lipase_GDSL_2	5.71
PF13302	Acetyltransf_3	4.76
PF00144	Beta-lactamase	3.81
PF01757	Acyl_transf_3	3.81
PF07883	Cupin_2	1.90
PF00657	Lipase_GDSL	1.90
PF04185	Phosphoesterase	1.90
PF09995	MPAB_Lcp_cat	0.95
PF14310	Fn3-like	0.95
PF02897	Peptidase_S9_N	0.95
PF12681	Glyoxalase_2	0.95
PF03704	BTAD	0.95
PF04198	Sugar-bind	0.95
PF11716	MDMPI_N	0.95
PF07336	ABATE	0.95
PF12850	Metallophos_2	0.95
PF07690	MFS_1	0.95
PF04115	Ureidogly_lyase	0.95
PF00005	ABC_tran	0.95
PF02826	2-Hacid_dh_C	0.95
PF02311	AraC_binding	0.95
PF00255	GSHPx	0.95
PF04542	Sigma70_r2	0.95
PF16124	RecQ_Zn_bind	0.95
PF01042	Ribonuc_L-PSP	0.95
PF05593	RHS_repeat	0.95
PF02852	Pyr_redox_dim	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	8.57
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	3.81
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	3.81
COG2367	Beta-lactamase class A	Defense mechanisms [V]	3.81
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.90
COG5516	Uncharacterized conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding	General function prediction only [R]	0.95
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.95
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.95
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.95
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.95
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.95
COG3194	Ureidoglycolate hydrolase (allantoin degradation)	Nucleotide transport and metabolism [F]	0.95
COG2390	DNA-binding transcriptional regulator LsrR, DeoR family	Transcription [K]	0.95
COG1770	Protease II	Amino acid transport and metabolism [E]	0.95
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.95
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.95
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.95
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.95
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.14 %
Unclassified	root	N/A	22.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.14 %
Unclassified	root	N/A	22.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.14 %
Unclassified	root	N/A	22.86 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.24 %
Unclassified	root	N/A	22.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54.29 %
Unclassified	root	N/A	22.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.95 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.38 %
Unclassified	root	N/A	22.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.81 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.95 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.86 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	14.29 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.81 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.90 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.95 %
Actinobacteria bacterium 13_2_20CM_2_71_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_71_6	0.95 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.29 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.81 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.90 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.95 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.95 %
Actinobacteria bacterium 13_2_20CM_2_71_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_71_6	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.29 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.81 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.90 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	0.95 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.95 %
Actinobacteria bacterium 13_2_20CM_2_71_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_71_6	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.29 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.81 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	1.90 %
Paenibacillus rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus rhizosphaerae	0.95 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.95 %
Actinobacteria bacterium 13_2_20CM_2_71_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_71_6	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.29 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.81 %
Frankia sp. EUN1f	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f	1.90 %
Paenibacillus rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus rhizosphaerae	0.95 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.95 %
Actinobacteria bacterium 13_2_20CM_2_71_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_71_6	0.95 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001175\|JGI12649J13570_1002600	All Organisms → cellular organisms → Bacteria	2680	Open in IMG/M
3300001546\|JGI12659J15293_10152906	Not Available	504	Open in IMG/M
3300001661\|JGI12053J15887_10169873	Not Available	1130	Open in IMG/M
3300002245\|JGIcombinedJ26739_100232102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1735	Open in IMG/M
3300002245\|JGIcombinedJ26739_101263991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300002245\|JGIcombinedJ26739_101331570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f	610	Open in IMG/M
3300002917\|JGI25616J43925_10078997	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300003505\|JGIcombinedJ51221_10022168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2240	Open in IMG/M
3300004092\|Ga0062389_102210410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	723	Open in IMG/M
3300005445\|Ga0070708_100018679	All Organisms → cellular organisms → Bacteria	5803	Open in IMG/M
3300005445\|Ga0070708_100031322	All Organisms → cellular organisms → Bacteria	4603	Open in IMG/M
3300005445\|Ga0070708_100329296	Not Available	1439	Open in IMG/M
3300005467\|Ga0070706_100017404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6632	Open in IMG/M
3300005467\|Ga0070706_100243559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_71_6	1679	Open in IMG/M
3300005467\|Ga0070706_100373861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1328	Open in IMG/M
3300005471\|Ga0070698_100751775	Not Available	918	Open in IMG/M
3300005518\|Ga0070699_100004342	All Organisms → cellular organisms → Bacteria	12541	Open in IMG/M
3300005536\|Ga0070697_100788067	Not Available	841	Open in IMG/M
3300005591\|Ga0070761_10090096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1757	Open in IMG/M
3300005602\|Ga0070762_10262471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1077	Open in IMG/M
3300005712\|Ga0070764_10014597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3879	Open in IMG/M
3300005764\|Ga0066903_100225526	All Organisms → cellular organisms → Bacteria	2848	Open in IMG/M
3300006028\|Ga0070717_10181490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1835	Open in IMG/M
3300006176\|Ga0070765_100269191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1567	Open in IMG/M
3300010046\|Ga0126384_10623084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus rhizosphaerae	947	Open in IMG/M
3300010048\|Ga0126373_10196119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1954	Open in IMG/M
3300010048\|Ga0126373_10228454	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300010048\|Ga0126373_11218303	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300010048\|Ga0126373_12664188	Not Available	558	Open in IMG/M
3300010048\|Ga0126373_13262661	Not Available	505	Open in IMG/M
3300010343\|Ga0074044_10283578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1091	Open in IMG/M
3300010358\|Ga0126370_10017914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4000	Open in IMG/M
3300010358\|Ga0126370_10764726	Not Available	857	Open in IMG/M
3300010359\|Ga0126376_11744093	Not Available	659	Open in IMG/M
3300010359\|Ga0126376_12293732	Not Available	586	Open in IMG/M
3300010361\|Ga0126378_10016786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6203	Open in IMG/M
3300010361\|Ga0126378_10054743	All Organisms → cellular organisms → Bacteria	3740	Open in IMG/M
3300010361\|Ga0126378_11081597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300010376\|Ga0126381_100186426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2761	Open in IMG/M
3300010379\|Ga0136449_100295346	All Organisms → cellular organisms → Bacteria	2960	Open in IMG/M
3300010398\|Ga0126383_11746354	Not Available	711	Open in IMG/M
3300011120\|Ga0150983_10445588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300011404\|Ga0153951_1030686	Not Available	923	Open in IMG/M
3300017821\|Ga0187812_1015209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2657	Open in IMG/M
3300017943\|Ga0187819_10148357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1397	Open in IMG/M
3300017972\|Ga0187781_10158543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1591	Open in IMG/M
3300017975\|Ga0187782_11642733	Not Available	508	Open in IMG/M
3300018007\|Ga0187805_10368401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300020199\|Ga0179592_10016033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3294	Open in IMG/M
3300020582\|Ga0210395_10016610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5417	Open in IMG/M
3300021181\|Ga0210388_10871461	Not Available	777	Open in IMG/M
3300021374\|Ga0213881_10441799	Not Available	588	Open in IMG/M
3300021401\|Ga0210393_10215913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1553	Open in IMG/M
3300021404\|Ga0210389_10541090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	916	Open in IMG/M
3300021406\|Ga0210386_10950880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300021477\|Ga0210398_10106388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2278	Open in IMG/M
3300021560\|Ga0126371_10052773	All Organisms → cellular organisms → Bacteria	3896	Open in IMG/M
3300021560\|Ga0126371_10868818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1047	Open in IMG/M
3300022715\|Ga0242678_1036295	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300022716\|Ga0242673_1095431	Not Available	568	Open in IMG/M
3300022733\|Ga0224562_1017824	Not Available	579	Open in IMG/M
3300025910\|Ga0207684_10045618	All Organisms → cellular organisms → Bacteria	3717	Open in IMG/M
3300025910\|Ga0207684_10134437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2123	Open in IMG/M
3300025910\|Ga0207684_10373552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1227	Open in IMG/M
3300026304\|Ga0209240_1126012	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300027080\|Ga0208237_1006042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1723	Open in IMG/M
3300027089\|Ga0207943_100078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6049	Open in IMG/M
3300027096\|Ga0208099_1010786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1211	Open in IMG/M
3300027110\|Ga0208488_1033138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	945	Open in IMG/M
3300027370\|Ga0209010_1002160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4689	Open in IMG/M
3300027505\|Ga0209218_1103848	Not Available	595	Open in IMG/M
3300027619\|Ga0209330_1102509	Not Available	650	Open in IMG/M
3300027648\|Ga0209420_1005148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5291	Open in IMG/M
3300027652\|Ga0209007_1001291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7606	Open in IMG/M
3300027652\|Ga0209007_1043231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1149	Open in IMG/M
3300027738\|Ga0208989_10043206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1564	Open in IMG/M
3300027853\|Ga0209274_10080042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1589	Open in IMG/M
3300027874\|Ga0209465_10094023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1467	Open in IMG/M
3300027879\|Ga0209169_10001811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12953	Open in IMG/M
3300027895\|Ga0209624_10259268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1156	Open in IMG/M
3300027895\|Ga0209624_10895276	Not Available	579	Open in IMG/M
3300027905\|Ga0209415_10441213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1029	Open in IMG/M
3300028047\|Ga0209526_10824813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f	572	Open in IMG/M
3300028906\|Ga0308309_10194912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1665	Open in IMG/M
3300028906\|Ga0308309_10200926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1642	Open in IMG/M
3300030730\|Ga0307482_1079342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300030741\|Ga0265459_11712296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300031823\|Ga0307478_10611198	Not Available	912	Open in IMG/M
3300031962\|Ga0307479_10405556	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300032065\|Ga0318513_10369129	Not Available	700	Open in IMG/M
3300032089\|Ga0318525_10228364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	957	Open in IMG/M
3300032089\|Ga0318525_10313402	Not Available	806	Open in IMG/M
3300032805\|Ga0335078_10027530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8434	Open in IMG/M
3300032805\|Ga0335078_10725637	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300032892\|Ga0335081_11160344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	884	Open in IMG/M
3300032895\|Ga0335074_10169526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2723	Open in IMG/M
3300032895\|Ga0335074_10169815	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300032895\|Ga0335074_10573341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1138	Open in IMG/M
3300032895\|Ga0335074_10750895	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300032895\|Ga0335074_11538624	Not Available	526	Open in IMG/M
3300032896\|Ga0335075_10002095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32353	Open in IMG/M
3300032896\|Ga0335075_10219156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2242	Open in IMG/M
3300032896\|Ga0335075_10362860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1567	Open in IMG/M
3300032898\|Ga0335072_10119862	All Organisms → cellular organisms → Bacteria	3309	Open in IMG/M
3300032898\|Ga0335072_10171831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2619	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.24%
Aquatic	Environmental → Aquatic	3.81%
Fungi	Host-Associated → Fungi	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.29%
Freshwater	Environmental → Aquatic → Freshwater	3.81%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.95%
Mycelium	Host-Associated → Fungi → Mycelium	0.95%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	42.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.81%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.95%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	30.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.38%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.95%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	20.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.19%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	12.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.43%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.95%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.95%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.95%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027089	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF015 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12649J13570_10026002	3300001175	Forest Soil	VLVDIVVVVVLALAAAGGLGFWIRRAASCGRTIDVPAGEFHQVFWGGVMCRNLITSGTLARLEFFDWGVRIRGIAVSRWIVPTWEARYEELAIAELVSLRYSRIAVWFRLRGDAGGMAFLSYHSNEILPLLEQRGVPVNRSVAQIRRAEELYRASGQG*
JGI12659J15293_101529061	3300001546	Forest Soil	AASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGNAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVEELYRTSGQG*
JGI12053J15887_101698732	3300001661	Forest Soil	ASCGRTIDAPATEPVDIFYGGVMCRYLITSGSLARLEFYDWGVRLRGNVLSRWIVPTWEARYEEIAIAELVALRSSRVAVWMRLRGKADGIAFLTNGSAPVLRQLEQHDLPVNRSVAQIRRVEELYRLPE*
JGIcombinedJ26739_1002321022	3300002245	Forest Soil	VLVDIVVVVVLALAAAGVGFWIRRAASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGNAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVEELYRTSGQG*
JGIcombinedJ26739_1012639912	3300002245	Forest Soil	VAAGLGFWIRRAASCGRTIDVPAGEFRQVFWGGVMCRXLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRIGVWFRLQRDAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVDELYDASGQG*
JGIcombinedJ26739_1013315701	3300002245	Forest Soil	GLFLWIRRAASCGRTIDAPAAEPEALFYGGVMCRYLITSGSLARLEFYDWGVRLRGNMLSRWIVPTWEARYEELAIAELVSLRWSRVAVWIRLRGKPDGIAFLTNGSAPVLRQLELHDLPVNRSVAQIRRVEELYRLPE*
JGI25616J43925_100789971	3300002917	Grasslands Soil	VLAILIVVLLALAGGAGLFFWIRRAASCGRTIDVPVAEPAAVFYGGVMCRHLITSGSLARLEFYDWGVRVRGIVLSRWIVPTWEARYEELAIAELVALHSSRVAVWLRLRGKSDGMAFLTNGSAEILRLLEQHDLPVNRSVAQIRRVEELYRPPG*
JGIcombinedJ51221_100221682	3300003505	Forest Soil	VLVDIVVVVVLALAVAAGLGIWIRRAASCGRTIDVDAAEIDRVFWGGVMCRNLITSGTLARLEFFDWGVRIRGTVISRWIVPTWEARYEELAIAELVSLRASRIAVWFRLRGDAGGMAFLSDHSTEILPLLERRGVPVNRSLAQIRRAAELYRAPGQG*
Ga0062389_1022104101	3300004092	Bog Forest Soil	VLIIAIVAVLAVAAGLYLWRRGAASCARTIDAPEGEFERVIWGGVMCRYLITSGTLVRLEFFDWGVRLRGIVVSRWIVPTWEARYDELAIAELVAMRWSRIGVWFRLRGESGGIVFLSDRSSEILPLLEQRGVPVNRALAQIRRVQELYEAPRRG*
Ga0070708_1000186794	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VQPAILVVVLLALVAGAGLFFWIRRAKSCGRTIDAPAGDLVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVLSRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGEQDGIAFLANGSADVLRQLERHDVPVNRALAQIKRVEELYRPPG*
Ga0070708_1000313222	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VLPAILVVVLAALVAGAGLFFWIRRAKSCGRTIDAPAGDPVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVVSRWVVPTWEARYHELAIAELVAMRWSRVAVWIRLRGAQDGIAFLANGSADVLRQFEQHDVPVNRSVAQIKRVEELYRPPG*
Ga0070708_1003292963	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VLLAILLVLVLALGVGASLFFWIRRAASCGRTIDVPVAEPAAVFYGGVMCRYLITSGSLARLEFYDWGVRLRGIVLSRWIVPTWEARYEELAIAELVAMRWSRVAVWLRLRGTPDGIGFLANGSAEILRLLERHDLPVNRSVAQIRRVEELYRPPR*
Ga0070706_1000174042	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VLPAILVVVLAALVAGAGLFFWIRRAKSCGRTIDAPAGDPVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVVSRWVVPTWEARYHELAIAELVAMRWSRVAVWMRLRGAQDGIAFLANGSADVLRQFEQHDVPVNRSVAQIKRVEELYRPPG*
Ga0070706_1002435593	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VLLAILLVLVLALGVGASLFFWIRRAASCGRTIDVPVAEPAAVFYGGVMCRYLITSGSLARLEFYDWGVRLRGIALSRWIVPTWEARYEELAIAELVAMRWSRVAVWLRLRGTPDGIGFLANGSAEILRLLERHDLPVNRSVAQIRRVEELYRPPR*
Ga0070706_1003738612	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ALVAGAGLFFWIRRAKSCGRTIDAPAGDLVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVLSRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGEQDGIAFLANGSADVLRQLERHDVPVNRALAQIKRVEELYRPPG*
Ga0070698_1007517751	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AISEGISAGNATGGLVLLAILLVLVLALGVGASLFFWIRRAASCGRTIDVPVAEPAAVFYGGVMCRYLITSGSLARLEFYDWGVRLRGIALSRWIVPTWEARYEELAIAELVAMRWSRVAVWLRLRGTPDGIGFLANGSAEILRLLERHDLPVNRSVAQIRRVEELYRPPR*
Ga0070699_10000434213	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VLPAILVVVLAALVAGAGLFFWIRRAKSCGRTIDAPAGDPVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVVSRWVVPTWEARYDELAIAELVAMRWSRVAVWIRLRGAQDGIAFLANGSADVLRQFEQHDVPVNRSVAQIKRVEELYRPPG*
Ga0070697_1007880671	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VQPAILVVVLLALVAGAGLFFWIRRAKSCGRTIDAPTGDLVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVLSRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGEQDGIAFLANGSADVLRQLERHDVPVNRALAQIKRVEELYRPPG*
Ga0070761_100900962	3300005591	Soil	VLVDIVVVVVLALAAAGLGFWIRRAASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGDAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVEELYRTSGQG*
Ga0070762_102624712	3300005602	Soil	VLVDIVVVVVLALAAAGLGFWIRRAASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGNAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVEELYRTSGQG*
Ga0070764_100145972	3300005712	Soil	VLVDIVVVVVLALAAAGLGFWIRRAASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGNAGGMAFLSYHSNEILPLLERRGVPVNRSLAQVRRVEELYRTSGQG*
Ga0066903_1002255262	3300005764	Tropical Forest Soil	VPPAIVVVVLLALVAGAGLFFWIRRAKSCGRTIDAPPGDLVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVVSRWVVPTWEARYEELAIAELVALRWSRVAVWMRLRGRQDGIAFLANGSKDVLSQLERHDVPINRSLAQIKRVEELYGPPG*
Ga0070717_101814902	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VLPAILLVVLLALAGCAGLFFWIRRAASCGRTIDVPASEPAMVFYGGVMCRYLITSGSLARLEFYDWGVRLRGTAVSRWIVPTWEARYSELAIAELVAMRWSRVAVWLRLQGKPDGIAFLANGSADILRLLEQHDVPVNRSVAQIRRVEELYRPPG*
Ga0070765_1002691912	3300006176	Soil	VLVDIVVVVVALAAAAGLGFWIRRAASCGRTIDVPAGEFGGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGDAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVEELYRTSGQG*
Ga0126384_106230842	3300010046	Tropical Forest Soil	MLVVVLLAIVAGAGLIVWIRRAKSCGRTIDAPVGDPDALFYGGVMCRHLITSGSLTRLEFYDWGVRLRGSVLSRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGTQDGIAFLANGSADVLRQLERHDVLVNRSVAQIK
Ga0126373_101961191	3300010048	Tropical Forest Soil	WIRRAKSCGRTIDAPPGDLVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVVSRWVVPTWEARYEELAIAELVALRWSRVAVWMRLRGRQDGIAFLANGSKDVLSQLERHDVPINRSLAQIKRVEELYGPPG*
Ga0126373_102284543	3300010048	Tropical Forest Soil	VAVVLLAVVASLFFWIRRAKSCGRTIDAPPGDLVALFYGGVMCRHLLTSGSLARLEFYDWGVRLRGSVLSRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGRQDGIAFLANGSAAVLRQLERHDVLVNRSVAQIKRVEELYRPPG*
Ga0126373_112183031	3300010048	Tropical Forest Soil	VLPEILVVVLLAVVAGAGLLFWIRRAKSCGRTIDAPAGDLVALFYGGVMCKGLVTSGSLTRLEFYDWGVRLCGSVVSRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGTQDGIAFLANGSADVLRQLEQHDVPVNRSVAQIKRVDELYRPSG*
Ga0126373_126641881	3300010048	Tropical Forest Soil	VPPAILVVVLLAVVAGAGLFFWIRRAKSCGRTIDTPAGDDPAALFYGGVMCRHLITSGSLARLEFYDWGVRLRGSIVSRWLVPTWEARYDELAIAELVALRWSRVGIWMRLRGTQDGIAFLANGSADVLRQLEQHDVLVNRSVAQIKRV
Ga0126373_132626612	3300010048	Tropical Forest Soil	WIRRAKSCGRTIDAPPGDLVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVASRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGRQDGIAFLANGSRDILSQLERHDVPVNRSLAQIKRVEELYSPPG*
Ga0074044_102835782	3300010343	Bog Forest Soil	VLVDIVVVVVLALVAAGLGIWIRRAASCGRTIDAPAAEFDRVFWGGVMCRALITSGNLARLEFFDWGVRIRGTMISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRRDAGGMAFLSYHSNEILPLLEERGVPVNRSLAQVRRVDELYRTSGQG*
Ga0126370_100179142	3300010358	Tropical Forest Soil	VPPAILVVVLLALVAGAGLFFWIRRAKSCGRTIDAPPGDLVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVVSRWVVPTWEARYEELAIAELVALRWSRVAVWMRLRGRQDGIAFLANGSKDVLSQLERHDVPINRSLAQIKRVEELYGPPG*
Ga0126370_107647262	3300010358	Tropical Forest Soil	VLPAILIVVLAALVAGAGLFLWIRRAKSCGRAVDAPGGDPVALFYGGVMCRHLVTSGSLARLEFYDWGVRLCGSVVSRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRDRQDGIAFLANGSADVLRQLEQHEVPVNRSVAQIKRVEELYRPPG*
Ga0126376_117440931	3300010359	Tropical Forest Soil	VPPAILVVVLLAVVAGAGLSFWIRRAKSCGRTIEAPPGDLVALFYGGVMCRRLVTSGSLARLEFYDWGVRLRGSVVSRWVVPTWEARYEELAIAELVALRWSRVAVWMRLRGTQDGIAFLANGSADVLRQLEEHDVLVNRSVAQIKRVDELYRPPG*
Ga0126376_122937321	3300010359	Tropical Forest Soil	VQPAILVVVLLALVAGAGLFFWIRRAKSCGRTIDAPPGDLVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVASRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGRQDGIAFLANGSRDILSQLERHDVPVNRSLAQIKRVEELYSPPG*
Ga0126378_100167866	3300010361	Tropical Forest Soil	VPPAILVVVLLAVVAGAGLFFWIRRAKSCGRTIDTPAGDDPAALFYGGVMCRHLITSGSLARLEFYDWGVRLRGSIVSRWLVPTWEARYDELAIAELVALRWSRVGIWMRLRGTQDGIAFLANGSADVLRQLEQHDVLVNRSVAQIKRVDELYRPPG*
Ga0126378_100547435	3300010361	Tropical Forest Soil	VPPAILVVVLLALVAGAGLFFWIRRAKSCGRTIDAPPGDLVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVVSRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGRQDGIAFLANGSKDVLSQLERHDVPINRSLAQIKRVEELYGPPG*
Ga0126378_110815971	3300010361	Tropical Forest Soil	FWIRRAKSCGRTIEAPAGDLVALFYGGVMCRRLVTSGSLARLEFYDWGVRLRGSVVSRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGTQDGIAFLANGSADVLRQLEEHDVLVNRSVAQIKRVDELYRPPG*
Ga0126381_1001864263	3300010376	Tropical Forest Soil	VLLAVVAGAGLFFWIRRAKSCGRTIDAAAGDLVALFYGGVMCRGLVTSGSLARLEFYDWGVRLCGSVVSRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGTQDGIAFLANGSADVLRELERHDVLVNRSVAQIKRVEELYRPPG*
Ga0136449_1002953466	3300010379	Peatlands Soil	VLLVILIVVLVALGAGLSFWIRRAASCGRTIDVAAAEPATVFYGGVMCKHLITSGSLARLEFYDWGVRIRGNILSRWIVPTWEARYEELAIAELVGMRWSRIAVWLKLRDKPDGMAFLSMHSSEILRLLEQHDLPVNRSLTQIRRVEELYRP*
Ga0126383_117463541	3300010398	Tropical Forest Soil	VPPAILVVVLLAVAAGAGLFFWVRRAKSCGRTIDAPVGDPDALFYGGVMCRHLLTSGSLARLEFYDWGVRLRGSVLSRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGTQDGIAFLANGSADVLRQLERHDVPVNRSLAQIKRVEELYRPPG*
Ga0150983_104455881	3300011120	Forest Soil	GRTIDVPAGEPSRIYWGGVMCRYLITSGNLARLEFFDWGVRIRGIAISRWIVPTWEARYEDLAIAELVSLHWSRIAVWFRLRGDAGGMAFLSYNSNEILPLLEDRGVPVNRSLAQVKRVEELYRASGKAEPGR*
Ga0153951_10306861	3300011404	Attine Ant Fungus Gardens	VLVDIVVVVVAALAAAAGLGFWIRRAASCGRTIDVPAGEFRQVFWGGVMCRTLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRIGVWFRLRRDAGGMAFLSYHSNEILPLLEQHGVPVNRSLAQVRRVDELYRAPGQG*
Ga0187812_10152092	3300017821	Freshwater Sediment	VLLEILLVAALVLVAIAGLLTSIRRAASCARTIDVPAGEPERYFSGGVMCRHLITSGSLARLEFHDWGVRVRGIAVSRWIVPTWEARYEELAIAELVATNWSRIGVWFRLRAQPDGMAFLTDRSRDILRQLELHDVPVNRSLTKIRRVEELYRPHS
Ga0187819_101483571	3300017943	Freshwater Sediment	IWIRRAASCARTIDVPAAERDRYFSGGVMCRHLITSGSLARLEFFDWGIRVRGIIISRWIVPTWEARYEELALAELVTLPWSRVAVWLRVRGDPGGMGFLSEWSGEILRTLEQHDVPVNRSVVKIRRVEELYGLPQ
Ga0187781_101585433	3300017972	Tropical Peatland	MVLHIVVVVVVAVAVAGGLGFWIRRAASCGRTIDVPAAEFDRVYWGGVMCRALITSGNLARLEFFDWGVRIRGTVISRWIVPTWEARYEELAIAELVSLRWSRLGVWFRLREDAGGMAFLSFHSNEILPLLERHGVPVNRSLAQIKRVDELYRAPGG
Ga0187782_116427331	3300017975	Tropical Peatland	GGLGFWIRRAASCGRTIDVPAADFDRVYWGGVMCRALITSGNLARLECFDWGVRIRGTLVSRWIVPTWEARYEELAIAELVHLHWSRIAVWFRLRGDAGGMGFLSYHSNEILPLLERRGVPVNRSLAQVRRAEELYRAPGQG
Ga0187805_103684012	3300018007	Freshwater Sediment	VVAILVIVLLVLAASAGMFFWIRRAASCGRTIGADTSGTPEAVFYGGVMCRGRVTSGSMVRLEFYDWGVRLRGLAVIRWIVPTWEARYEELAIGELVSLKWSRVAVWLKLRDKPDGIAFLANGSADILRQLEKHDVPVNRSVAQIKRVEE
Ga0179592_100160333	3300020199	Vadose Zone Soil	VLIVVLIVALLALAGGAGLFLWVRRAASCGRTIDAPATEPVDIFYGGVMCRYLITSGSLARLEFYDWGVRLRGNVLSRWIVPTWEARYEEIAIAELVALRSSRVAVWMRLRGKADGIAFLTNGSAPVLRQLEQHDLPVNRSVAQIRRVEELYRLPE
Ga0210395_100166104	3300020582	Soil	VLVDIVVVVVALAVAAGLGFWIRRAASCGRTIDVPAGEFRQVFWGGVMCRTLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRLGVWFRLRRDAGGMAFLSYHSNEILPLLESHGVPVNRSLAQVKRVEELYRTSGQG
Ga0210388_108714611	3300021181	Soil	LAAAGLGFWIRRAASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRLGVWFRLRRDAGGMAFLSYHSNEILPLLESHGVPVNRSLAQVKRVEELYRTSGQG
Ga0213881_104417991	3300021374	Exposed Rock	GVSAGLFFWIRRAASCGRTIGADTSGTPQAVFYGGVMCRYLVTSGSMVRLEFYDWGVRLRGMAVSRWIVPTWEARYEELAIAELVGLRWSRIAVWFKLRGKPDGIAFLANGSADILRRLEKHDVPVNRSVAQIKRVEELYRT
Ga0210393_102159131	3300021401	Soil	VDIVVVVVALAVAAGLGFWIRRAASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGNAGGMAFLSYHSNEILPLLERRGVPVNRSLAQVRRVEELYRTSGQG
Ga0210389_105410902	3300021404	Soil	LGDPGSRLVDIVVVVVALAVAAGLGFWIRRAASCGRTIDVPAGEFRQVFWGGVMCRTLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRIGVWFRLRREAGGMAFLSYHSNEILPLLEQHGVPVNRSLAQVRRVAELYDASG
Ga0210386_109508801	3300021406	Soil	VLVDIVVVVVALAVAAGLGFWIRRAASCGRTIDVPAGEFRQVFWGGVMCRTLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRLGVWFRLRRDAGGMAFLSYHSNEILPLLERRGVPVNRSLAQ
Ga0210398_101063882	3300021477	Soil	VLVDIVVVVVLALAAAGLGFWIRRAASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGNAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVEELYRTSGQG
Ga0126371_100527732	3300021560	Tropical Forest Soil	VPPAILVVVLLALVAGAGLFFWIRRAKSCGRTIDAPPGDLVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVVSRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGRQDGIAFLANGSKDVLSQLERHDVPINRSLAQIKRVEELYGPPG
Ga0126371_108688182	3300021560	Tropical Forest Soil	VPPAILVVVLLAVVAGAGLFFWIRRAKSCGRTIDTPAGDDPAALFYGGVMCRHLITSGSLARLEFYDWGVRLRGSIVSRWLVPTWEARYDELAIAELVALRWSRVGIWMRLRGTQDGIAFLANGSADVLRQLEQHDVLVNRSVAQIKRVDELYRPPG
Ga0242678_10362952	3300022715	Soil	VLVDIVVVVVALAVAAGLGFWIRRAASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRLGVWFRLRRDAGGMAFLSYHSNEILPLLESHGVPVNRSLAQVKRVEELYRTSGQG
Ga0242673_10954311	3300022716	Soil	RSPGGRVLVDIVVVVVALAVAAGLGFWIRRAASCGRTIDVPAGEYNGFFWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRLGVWFRLRRDAGGMAFLSYHSNEILPLLESHGVPVNRSLAQVRRVDELYRASGQG
Ga0224562_10178241	3300022733	Soil	VLVDIVVVVVALAVAAGLGFWIRRAASCGRTIDVPAGEHNGFFWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRRDAGGMAFLSYHSSEILPLLEQRGVPVNRSLAQVKRVEELYRASGQS
Ga0207684_100456182	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VLPAILVVVLAALVAGAGLFFWIRRAKSCGRTIDAPAGDPVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVVSRWVVPTWEARYHELAIAELVAMRWSRVAVWMRLRGAQDGIAFLANGSADVLRQFEQHDVPVNRSVAQIKRVEELYRPPG
Ga0207684_101344371	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VQPAILVVVLLALVAGAGLFFWIRRAKSCGRTIDAPAGDLVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVLSRWVVPTWEARYDELAIAELVALRWSRVAVWMRLRGEQDGIAFLANGSADVLRQLERHDVPVNRALAQIKRVEELYRPPG
Ga0207684_103735522	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VLLAILLVLVLALGVGASLFFWIRRAASCGRTIDVPVAEPAAVFYGGVMCRYLITSGSLARLEFYDWGVRLRGIALSRWIVPTWEARYEELAIAELVAMRWSRVAVWLRLRGKPDGIAFLANGSADILRLLEQHDVPVNRSVAQIRRVEELYRPPG
Ga0209240_11260121	3300026304	Grasslands Soil	VLPAILLVVLLALAGCAGLFFWIRRAASCGRTIDVAASEPAMVFYGGVMCRYLITSGSLARLEFYDWGVRLRGTAVSRWIVPTWEARYSELAIAELVAMRWSRIAVWLRLQGKPDGIAFLANGSADILRLLEQHDVPVNRSVAQIRRVEELYR
Ga0208237_10060422	3300027080	Forest Soil	VLVDIVVVVVALAAAAGLGFWIRRAASCGRTIDVDAAEIDRVFWGGVMCRNLITSGTLARLEFFDWGVRIRGTVISRWIVPTWEARYEELAIAELVSLRASRIAVWFRLRGDAGGMAFLSDHSTEILPLLERRGVPVNRSLAQIRRAAELYRAPGQG
Ga0207943_1000782	3300027089	Forest Soil	VLVDIVVVVVLALAVAAGLGIWIRRAASCGRTIDVDAAEIDRVFWGGVMCRNLITSGTLARLEFFDWGVRIRGTVISRWIVPTWEARYEELAIAELVSLRASRIAVWFRLRGDAGGMAFLSDHSTEILPLLERRGVPVNRSLAQIRRAAELYRAPGQG
Ga0208099_10107861	3300027096	Forest Soil	VLVDIVVVVVALAAAAGLGFWIRRAASCGRTIDVPAGELGGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGDAGGMAFLSYNSNEILPLLEDRGVPVNRSLAQVKRVEELYRASGEG
Ga0208488_10331381	3300027110	Forest Soil	GRVLVDIVVVVVALAAAAGLGFWIRRAASCGRTIDVPAGELGGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGDAGGMAFLSYNSNEILPLLEDRGVPVNRSLAQVKRVEELYRASGEG
Ga0209010_10021602	3300027370	Forest Soil	VLVDIVVVVVLALAAAGGLGFWIRRAASCGRTIDVPAGEFHQVFWGGVMCRNLITSGTLARLEFFDWGVRIRGIAVSRWIVPTWEARYEELAIAELVSLRYSRIAVWFRLRGDAGGMAFLSYHSNEILPLLEQRGVPVNRSVAQIRRAEELYRASGQG
Ga0209218_11038481	3300027505	Forest Soil	GFWIRRAASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGNAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVEELYRTSGQG
Ga0209330_11025091	3300027619	Forest Soil	RPHYPHWGYLGDPGSRLIAPGHSGRGTDPLRSPGGRVLVDIVVVVVLALAAAGVGFWIRRAASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRIGVWFRLQRDAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVDELYDASGQG
Ga0209420_10051482	3300027648	Forest Soil	VLVDIVVVVVALAAAAGLGFWIRRAASCGRTIDVPAGEPAGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGDAGGMAFLSYHSNEILPLLEQRGVPVNRSLAQVKRVEELYRASGQG
Ga0209007_10012915	3300027652	Forest Soil	VLVDIVVVVVALAVAAGLGFWIRRAASCGRTIDVPAGEFRQVFWGGVMCRTLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRIGVWFRLQRDAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVDELYDASGQG
Ga0209007_10432312	3300027652	Forest Soil	VLVDIVVVVVLALAAAGGLGFWIRRAASCGRTIDVPAGEFRQVFWGGVMCRNLITSGTLARLEFFDWGVRIRGIAVSRWIVPTWEARYEELAIAELVSLRYSRIAVWFRLRGDAGGMAFLSYHSNEILPLLEQRGVPVNRSVAQIRRAEELYRASGQG
Ga0208989_100432061	3300027738	Forest Soil	VLIVVLIVALLALAGGAGLFLWIRRAASCGRTIDAPATEPVDIFYGGVMCRYLITSGSLARLEFYDWGVRLRGNVLSRWIVPTWEARYEEIAIAELVALRSSRVAVWMRLRGKADGIAFLTNGSAPVLRQLEQHDLPVNRSVAQIRRVEELYRLP
Ga0209274_100800422	3300027853	Soil	VLVDIVVVVVLALAAAGLGFWIRRAASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGDAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVEELYRTSGQG
Ga0209465_100940232	3300027874	Tropical Forest Soil	VPPAILVVVLLALVAGAGLFFWIRRAKSCGRTIDAPPGDLVALFYGGVMCRHLVTSGSLARLEFYDWGVRLRGSVVSRWVVPTWEARYEELAIAELVALRWSRVAVWMRLRGRQDGIAFLANGSKDVLSQLERHDVPINRSLAQIKRVEELYGPPG
Ga0209169_100018115	3300027879	Soil	VLVDIVVVVVLALAAAGLGFWIRRAASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGNAGGMAFLSYHSNEILPLLERRGVPVNRSLAQVRRVEELYRTSGQG
Ga0209624_102592682	3300027895	Forest Soil	VLVDIVVVVVLALAAAGVGFWIRRAASCGRTIDVPAGEPDGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGNAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVEELYRTSGQG
Ga0209624_108952762	3300027895	Forest Soil	VLVDIVVVVVLALAAAGGLGFWIRRAASCGRTIDVPAGEFHQVFWGGVMCRNLITSGTLARLEFFDWGVRIRGIAVSRWIVPTWEARYEELAIAELVSLRYSRIAVWFRLRGDAGGMAFLSYHSNEILPLLEQRGVPVNRSLAQVKRVEELYRASGQG
Ga0209415_104412132	3300027905	Peatlands Soil	VLLVILIVVLVALGAGLSFWIRRAASCGRTIDVAAAEPATVFYGGVMCKHLITSGSLARLEFYDWGVRIRGNILSRWIVPTWEARYEELAIAELVGMRWSRIAVWLKLRDKPDGMAFLSMHSSEILRLLEQHDLPVNRSLTQIRRVEELYRP
Ga0209526_108248131	3300028047	Forest Soil	AGLFLWIRRAASCGRTIDAPAAEPEALFYGGVMCRYLITSGSLARLEFYDWGVRLRGNMLSRWIVPTWEARYEELAIAELVSLRWSRVAVWIRLRGKPDGIAFLTNGSAPVLRQLELHDLPVNRSVAQIRRVEELYRLPE
Ga0308309_101949122	3300028906	Soil	VLVDIVVVVVALAVAAGLGFWIRRAASCGRTIDVPAGEYNGFFWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRIGVWFRLRLDAGGMAFLSYHSNEILPLLEQHGVPVNRSLAQVRRVDELYRASGQG
Ga0308309_102009262	3300028906	Soil	VLVDIVVVVVALAAAAGLGFWIRRAASCGRTIDVPAGEFGGFYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGDAGGMAFLSYHSNEILPLLERHGVPVNRSLAQVRRVEELYRTSGQG
Ga0307482_10793422	3300030730	Hardwood Forest Soil	VVAILVIVLLVLAASGGLFFWIRRAASCGRTIGADTSGTPQAVFYGGVMCRYLVTSGSMVRLEFYDWGVRLRGMAVSRWIVPTWEARYEELAIGELVGLRWSRIAVWLKLRGKPDGIAFLANGSGDILRLLEKHDVPVNRSIAQIKRVEELYRP
Ga0265459_117122961	3300030741	Soil	LAVAAGLGFWIRRAASCGRTIDVPAGEYNGFFWGGVMCRNLITSGHLARLEFFDWGVRIRGIAVSRWIVPTWEARYEELAIAELVSLRHSRIAVWFRLRGDAGGMAFLSDHSNEILPLLEQHGVPVNRSLAQVRRVDELYRASGQG
Ga0307478_106111981	3300031823	Hardwood Forest Soil	VVAILVIVLLVLAASAGLFFWTRRAASCGRTIGADTSGTPQAVFYGGVMCRYLVTSGSMVRLEFYDWGVRLRGMAVSRWIVPTWEARYEELAIGELVGLRWSRIAVWLKLRGKPDGIAFLANGSGDILRLLEKHDVPVNRSIAQIKRVEELYRP
Ga0307479_104055561	3300031962	Hardwood Forest Soil	VLPAILLVVLLALAGCAGLYFWIRRAASCGRTIDVPASEPAMVFYGGVMCRYLITSGSLARLEFYDWGVRLRGIAVSRWIVPTWEARYSELAIAELVAMRWSRVAVWLKLQGKPDGIAFLANGSAQILRLLEQHDVPVNRSVAQIRRVEELYRPPG
Ga0318513_103691292	3300032065	Soil	VPPAILVVVLLAVVAGAGLFFWIRRAKSCGRTIDTPAGDPVALFYGGVMCRHLITSGSLARLEFYDWGVRLRGSIVSRWLVPTWEARYDELAIAELVALRWSRVGIWMRLRDTQDGIAFLANGSAEVLRQLEQHDVLVNRSVAQIKRVDELYRPPG
Ga0318525_102283642	3300032089	Soil	VVAILVVVLLVLAVSAGLFFWIRRAASCGRTIGADTSGTPETVFYGGVMCRALVTSGSMVRLEFYDWGVRLRGLAVSRWIVPTWEARYDELAIGELVSLKWSRVAVWLKLRGKPDGIAFLANGSADILRQLEKHDVPVNRSVAQIKRVEELYRA
Ga0318525_103134022	3300032089	Soil	MVAILVIVLLALGVSAGLVFWIRRAASCGRTIGADTSGTPQAVFYGGVMCRYLVTSGSMVRLEFYDWGVRLRGMAVSRWIVPTWEARYEELAIGELVGLKWSRIAVWLKLRGKADGIAFLANGSGDILRLLEKHDVPVNRSIAQIKRVEELYRP
Ga0335078_100275304	3300032805	Soil	VRDSGVVAILIVVLLALAAAAGLTFWIRRAASCGRTIDAPAGEPRRVFWGGVMCRYLITSGTLARLEFYDWGVRLRGTAVSRWIVPTWEARYEDLAIAELVSLKWSRIAVWMRLRGEANGIAFLSDRSSEIMPLLEQHDVPVNRALARVSRVQELYRLPGPG
Ga0335078_107256371	3300032805	Soil	VLADIVVVVVLALAAVGGLGFWIRRAASCGRTIDVPAGEPGRIYWGGVMCRNLITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYAELAIAELVSLRWSRLGVWFRLRGDAGGMAFLSYHSNEILPLLERHDVPVNRSLAQVRRVEELYRTSGQG
Ga0335081_111603442	3300032892	Soil	VRDSGVVAILIVVLLALAAAAGLTFWIRRAASCGRTIDAPAGEPRRVFWGGVMCRYLITSGTLARLEFYDWGVRLRGTAVSRWIVPTWEARYEDLAIAELVSLKWSRIAVWMRLRGEANGIAFLSDRSSEIMPLLEQHDVPVNRALAR
Ga0335074_101695262	3300032895	Soil	MLVHIVVVVVLAVAVAGGLGFWIRRAASCGRTIDVPAVEFDRVFWGGVMCRALITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRIGVWFRLRGDAGGMAFLSYHSNEILVLLEGHGVPVNRSLAQIKRAEELYRAPGQG
Ga0335074_101698152	3300032895	Soil	MLVHIVVVVVLAVAVAGGLGFWIRRAASCGRTIDVPAADFDRVFWGGVMCRALITSGNLARLEFFDWGVRIRGIAVSRWIVPTWEARYEELAIAELVSLRWSRIGVWFRLRGDAGGMAFLSYHSNEILPLLEGHGVPVNRSMAQIKRAEELYRAPGQG
Ga0335074_105733411	3300032895	Soil	VLVDIVVVVVLAVAVAGGLGFWIRRAASCGRTIDVPAVDFDRVFWGGVMCRALITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRIGVWFRLRGDAGGMAFLSYHSNEILPLLEGHGVPVNRSLAQIRRAEELYRAPGQG
Ga0335074_107508951	3300032895	Soil	MLVHIVVGVVLAVAVAGGLGFWIRRAASCGRTIDVPAAEFDRVFWGGVMCRALITSGNLARLEFFDWGVRIRGIAVSRWIVPTWEARYEELAIAELVSLRWSRIGVWFRLREDAGGMAFLSYHSNEILPLLEGHGVPVNRSLAQIRRAEELYRASGQG
Ga0335074_115386241	3300032895	Soil	VLVDIVVVVVAALAAAGGLGFWVRRAASCGRTIEVPAGEPSRIYWGGVMCRYLITSGSLARLEFFDWGVRIRGIAISRWIVPTWEARYEDLAIAELVSLHWSRIAVWFRLRENAGGMAFLSYNSNEILPLLEDHGVPVNRS
Ga0335075_100020952	3300032896	Soil	VAIVVLVLAVGAGLGFWIRRAASCGRTIDAPAGEPGRVFWGGVMCRYLITSGTLARLEFFDWGVRLRGIAVSRWIVPTWEARYEELAIAELVSLRWSRIAVWLKLRGEAGGIAFLSDRSSEILPLLERNGVPVNRALATIRRVEDLYRPAGPA
Ga0335075_102191562	3300032896	Soil	MLVHIVVVVVLAVAVAGGLGFWIRRAASCGRTIDVPAAEFDRVFWGGVMCRALITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRIGVWFRLREDAGGMAFLSYHSNEILPLVEGHGVPVNRSLAQIKRAEELYRAPGQS
Ga0335075_103628602	3300032896	Soil	VLVDIVVVVVAALAAAAGLGFWIRRAASCGRSIDVPAGEPSRIYWGGVMCRYLITSGSLARLEFFDWGVRIRGIAISRWIVPTWEARYEELAIAELVSLHWSRIAVWFRLRENAGGMAFLSYNSSEILPLLESRGVPVNRSLAQVK
Ga0335072_101198624	3300032898	Soil	MLVHIVVVVVLAVAVAGGLGFWIRRAASCGRTIDVPAAEFDRVFWGGVMCRALITSGNLARLEFFDWGVRIRGTAISRWIVPTWEARYEELAIAELVSLRWSRIGVWFRLRGDAGGMAFLSYHSNEILVLLEGHGVPVNRSLAQIKRAEELYRAPGQG
Ga0335072_101718312	3300032898	Soil	VLVDIVVVVVAALAAAAGLGFWIRRAASCGRTIDVPAGEPSRIYWGGVMCRNLITSGNLARLEFFDWGVRIRGIAISRWIVPTWEARYEELAIAELVSLHWSRIAVWFRLRGNAGGMAFLSYNSNEILPLLEDHGVPVNRSLAQVKRVEELYRTSGQG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095807

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences