NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F095792

Metagenome / Metatranscriptome Family F095792

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095792
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 49 residues
Representative Sequence EGGVSDIINHVPWDNLFLIVIAMPLVATLIGWVLAGRDPTGIATRPME
Number of Associated Samples 86
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 3.81 %
% of genes near scaffold ends (potentially truncated) 96.19 %
% of genes from short scaffolds (< 2000 bps) 90.48 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (67.619 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(30.476 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(49.524 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 44.74%    β-sheet: 0.00%    Coil/Unstructured: 55.26%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF13469Sulfotransfer_3 26.67
PF06742DUF1214 3.81
PF00005ABC_tran 3.81
PF02687FtsX 1.90
PF07885Ion_trans_2 0.95
PF02515CoA_transf_3 0.95
PF13365Trypsin_2 0.95
PF04909Amidohydro_2 0.95
PF02784Orn_Arg_deC_N 0.95
PF02776TPP_enzyme_N 0.95
PF00248Aldo_ket_red 0.95
PF08450SGL 0.95
PF04191PEMT 0.95
PF01243Putative_PNPOx 0.95
PF13011LZ_Tnp_IS481 0.95
PF14019DUF4235 0.95
PF04055Radical_SAM 0.95
PF08281Sigma70_r4_2 0.95
PF12802MarR_2 0.95
PF03551PadR 0.95
PF00196GerE 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG5361Uncharacterized conserved proteinMobilome: prophages, transposons [X] 3.81
COG5402Uncharacterized protein, contains DUF1214 domainFunction unknown [S] 3.81
COG0019Diaminopimelate decarboxylaseAmino acid transport and metabolism [E] 0.95
COG1166Arginine decarboxylase (spermidine biosynthesis)Amino acid transport and metabolism [E] 0.95
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.95
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.95
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 0.95
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.95
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 0.95
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A67.62 %
All OrganismsrootAll Organisms32.38 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004092|Ga0062389_101946923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales765Open in IMG/M
3300004092|Ga0062389_102189172All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia727Open in IMG/M
3300004092|Ga0062389_102373669Not Available701Open in IMG/M
3300004635|Ga0062388_101349082All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia714Open in IMG/M
3300006059|Ga0075017_100180760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1517Open in IMG/M
3300006162|Ga0075030_100052026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3420Open in IMG/M
3300006162|Ga0075030_100236459All Organisms → cellular organisms → Bacteria1466Open in IMG/M
3300006176|Ga0070765_100719183All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia943Open in IMG/M
3300009523|Ga0116221_1035682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2418Open in IMG/M
3300009698|Ga0116216_10541943Not Available702Open in IMG/M
3300009824|Ga0116219_10836353Not Available501Open in IMG/M
3300010049|Ga0123356_11262999Not Available903Open in IMG/M
3300010371|Ga0134125_12849426Not Available525Open in IMG/M
3300010379|Ga0136449_100066038All Organisms → cellular organisms → Bacteria7837Open in IMG/M
3300010379|Ga0136449_102540497Not Available733Open in IMG/M
3300010379|Ga0136449_103629706Not Available585Open in IMG/M
3300014155|Ga0181524_10313554Not Available710Open in IMG/M
3300014159|Ga0181530_10124799All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1501Open in IMG/M
3300014164|Ga0181532_10287952Not Available933Open in IMG/M
3300014165|Ga0181523_10219239Not Available1095Open in IMG/M
3300014200|Ga0181526_10595463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria699Open in IMG/M
3300014200|Ga0181526_10676013Not Available651Open in IMG/M
3300014201|Ga0181537_10648612Not Available719Open in IMG/M
3300014489|Ga0182018_10408749Not Available725Open in IMG/M
3300014489|Ga0182018_10646040Not Available553Open in IMG/M
3300014501|Ga0182024_12682126Not Available533Open in IMG/M
3300014638|Ga0181536_10258264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium830Open in IMG/M
3300014838|Ga0182030_10242124Not Available2077Open in IMG/M
3300016294|Ga0182041_10034540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3280Open in IMG/M
3300017946|Ga0187879_10836382Not Available514Open in IMG/M
3300018016|Ga0187880_1306585All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria683Open in IMG/M
3300018033|Ga0187867_10411660Not Available748Open in IMG/M
3300018042|Ga0187871_10678857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia573Open in IMG/M
3300018057|Ga0187858_10118553Not Available1789Open in IMG/M
3300021180|Ga0210396_10401538Not Available1205Open in IMG/M
3300021181|Ga0210388_10977057Not Available727Open in IMG/M
3300025633|Ga0208480_1087796All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia750Open in IMG/M
3300027652|Ga0209007_1095907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium745Open in IMG/M
3300027684|Ga0209626_1095271Not Available769Open in IMG/M
3300027889|Ga0209380_10114354All Organisms → cellular organisms → Bacteria1567Open in IMG/M
3300027908|Ga0209006_10760156Not Available789Open in IMG/M
3300028906|Ga0308309_10844432All Organisms → cellular organisms → Bacteria → Terrabacteria group795Open in IMG/M
3300029922|Ga0311363_11328237Not Available593Open in IMG/M
3300029954|Ga0311331_10738534All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris900Open in IMG/M
3300029999|Ga0311339_11100179Not Available736Open in IMG/M
3300030013|Ga0302178_10182614Not Available1020Open in IMG/M
3300030580|Ga0311355_10853824Not Available831Open in IMG/M
3300030618|Ga0311354_10112842All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Sterolibacterium → Sterolibacterium denitrificans3019Open in IMG/M
3300030707|Ga0310038_10120625Not Available1341Open in IMG/M
3300030739|Ga0302311_10284088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae1209Open in IMG/M
3300030746|Ga0302312_10393361Not Available517Open in IMG/M
3300030764|Ga0265720_1026419Not Available507Open in IMG/M
3300030862|Ga0265753_1114855Not Available559Open in IMG/M
3300031028|Ga0302180_10513126Not Available586Open in IMG/M
3300031090|Ga0265760_10039262Not Available1409Open in IMG/M
3300031233|Ga0302307_10022085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3551Open in IMG/M
3300031234|Ga0302325_11038597Not Available1114Open in IMG/M
3300031234|Ga0302325_12201432Not Available671Open in IMG/M
3300031234|Ga0302325_12554481Not Available607Open in IMG/M
3300031234|Ga0302325_13150502Not Available528Open in IMG/M
3300031525|Ga0302326_10003527All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria36743Open in IMG/M
3300031525|Ga0302326_10662054Not Available1536Open in IMG/M
3300031525|Ga0302326_12540611All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → Tetrasphaera japonica641Open in IMG/M
3300031543|Ga0318516_10749128Not Available553Open in IMG/M
3300031544|Ga0318534_10227096All Organisms → cellular organisms → Bacteria → Terrabacteria group1077Open in IMG/M
3300031679|Ga0318561_10414085Not Available741Open in IMG/M
3300031681|Ga0318572_10246676Not Available1050Open in IMG/M
3300031708|Ga0310686_101811657Not Available1235Open in IMG/M
3300031736|Ga0318501_10853002All Organisms → cellular organisms → Bacteria → Terrabacteria group506Open in IMG/M
3300031748|Ga0318492_10414895Not Available709Open in IMG/M
3300031751|Ga0318494_10399555Not Available797Open in IMG/M
3300031751|Ga0318494_10776848Not Available561Open in IMG/M
3300031763|Ga0318537_10340929Not Available554Open in IMG/M
3300031764|Ga0318535_10061518Not Available1591Open in IMG/M
3300031765|Ga0318554_10368254Not Available816Open in IMG/M
3300031771|Ga0318546_10441498Not Available911Open in IMG/M
3300031777|Ga0318543_10102265All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1232Open in IMG/M
3300031779|Ga0318566_10669797Not Available503Open in IMG/M
3300031781|Ga0318547_10645836Not Available657Open in IMG/M
3300031845|Ga0318511_10415437Not Available617Open in IMG/M
3300031846|Ga0318512_10146792Not Available1136Open in IMG/M
3300031860|Ga0318495_10347462Not Available657Open in IMG/M
3300031860|Ga0318495_10485165Not Available540Open in IMG/M
3300031890|Ga0306925_11321164Not Available715Open in IMG/M
3300031893|Ga0318536_10580717Not Available561Open in IMG/M
3300031910|Ga0306923_12281776Not Available540Open in IMG/M
3300031941|Ga0310912_10711949Not Available778Open in IMG/M
3300032001|Ga0306922_10112855All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Sterolibacterium → Sterolibacterium denitrificans2885Open in IMG/M
3300032041|Ga0318549_10357682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria658Open in IMG/M
3300032041|Ga0318549_10568804Not Available509Open in IMG/M
3300032043|Ga0318556_10392831All Organisms → cellular organisms → Bacteria → Terrabacteria group726Open in IMG/M
3300032055|Ga0318575_10053109Not Available1865Open in IMG/M
3300032055|Ga0318575_10190908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1027Open in IMG/M
3300032055|Ga0318575_10251648Not Available891Open in IMG/M
3300032063|Ga0318504_10599814All Organisms → cellular organisms → Bacteria → Terrabacteria group529Open in IMG/M
3300032065|Ga0318513_10113341Not Available1276Open in IMG/M
3300032067|Ga0318524_10735281Not Available521Open in IMG/M
3300032160|Ga0311301_12348977Not Available604Open in IMG/M
3300032160|Ga0311301_12519891Not Available574Open in IMG/M
3300032261|Ga0306920_103342922Not Available597Open in IMG/M
3300032895|Ga0335074_11579018Not Available515Open in IMG/M
3300032896|Ga0335075_10563243Not Available1141Open in IMG/M
3300032896|Ga0335075_11245471Not Available641Open in IMG/M
3300032898|Ga0335072_10029231All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia7671Open in IMG/M
3300034124|Ga0370483_0157470Not Available765Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil30.48%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa14.29%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil8.57%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog7.62%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.76%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.81%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.86%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.86%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.86%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa1.90%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.95%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.95%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.95%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.95%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.95%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.95%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.95%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010049Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3Host-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014638Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaGEnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300025633Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300027652Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029922III_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029954I_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030013Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3EnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300030746Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1EnvironmentalOpen in IMG/M
3300030764Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031233Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062389_10194692313300004092Bog Forest SoilLSDIIDHVPWSNLILIVIAMPALAMIVGWVLAGRDPAAISARPME*
Ga0062389_10218917213300004092Bog Forest SoilTVAAYIGLFGWFRSNALEGGVSDIIDHVPWDNLFLILIAMPVVAVLIGWVLAGREPTGIGSRPME*
Ga0062389_10237366913300004092Bog Forest SoilLEGGVSDIINHVPWDNLFLIVIAMPLVATLIGWVLAGRDPTGIATRPME*
Ga0062388_10134908223300004635Bog Forest SoilYIGLIGWFRANALEGGVSDIINHAPWHNLFFILIAMPVVAVLIGWVLAGREPTGIGSRPME*
Ga0075017_10018076023300006059WatershedsLLGAVLGTVAAYIGLFGWFRANSLEGGLSDIIDHVPWDNLFFILIAMPLVATLVGWVLAGRDPSGIATRPME*
Ga0075030_10005202613300006162WatershedsHVPWDNLFLILIAMPAAAMLIGWVLAGREPRGIAVRPME*
Ga0075030_10023645943300006162WatershedsAAYVGLVGWFRSNSLEGGLSDVIDHVPWNNLFLIVIAMPIVAMAVGWVLAGRDPTGIATRPME*
Ga0070765_10071918323300006176SoilAYIGLFGWFRSNALEGGVSDIIDHVPWSNLFLIVIAMPLVATLVGWVLAGRDPTGISTRPME*
Ga0116221_103568233300009523Peatlands SoilGVSDIINHVPWDNLLLTLIAMPVAAMLIGWLLAGRDPNGIATRPME*
Ga0116216_1054194313300009698Peatlands SoilHIPWSNLFLIVIAMPAVAAIGGWVLAGRDPTGLSTRPLE*
Ga0116219_1083635323300009824Peatlands SoilVASLEGGLSDIIDHIPWSNLFLIVIAMPVVATIVGWVLAGRDPTGISTRPME*
Ga0123356_1126299933300010049Termite GutGLFGWFNSNSLEGGLSDLTNNVPWSHLFLILIVMPAVAVLIGWVLAGREPSGISTRPME*
Ga0134125_1284942613300010371Terrestrial SoilLSDIIDHVPWSNLFLIVVAMPAVAMLVGWLLAGREPTGIANRPLE*
Ga0136449_100066038113300010379Peatlands SoilNNLFLIVIAMPVVAMIVGYVLAGRDPTGISTRPME*
Ga0136449_10254049723300010379Peatlands SoilWNNLFLIVIAMPVVAILVGWVLAGRDPTGISTRPME*
Ga0136449_10362970623300010379Peatlands SoilEGGVSDIINHVPWDNLFFIVIAMPVAAMLIGWLLAGRDPKGIATRPLE*
Ga0181524_1031355423300014155BogALLGTVAAYVGLFGWFRTNALEGGVSDIIDHIPWGNLFLIVIAMPAVAMVVGYVLAGRDPTGISTRPME*
Ga0181530_1012479923300014159BogLFGLRLGAHVPWSNLFLIVIAMPIVAAAVGWVLAGRDPRGISTRPME*
Ga0181532_1028795213300014164BogIPWGNLFLIVIAMPAVAMVVGYVLAGRDPTGISTRPME*
Ga0181523_1021923933300014165BogDIINHVPWDNLFLILLAMPAVAMLIGWLLAGRDPKGIAARPME*
Ga0181526_1059546323300014200BogVPWGNLFLIVIAMPLVAAAVGWVLAGRDPTGISTRPME*
Ga0181526_1067601323300014200BogGGVSDIIDHIPWGNLFLIVIAMPAVAMVVGWALAGRDPTGIATRPME*
Ga0181537_1064861233300014201BogALEGGLSDIIGHIPWTNLLLIVIAMPIVATIVGWMLAGRDPSRISTRPME*
Ga0182018_1040874913300014489PalsaTVAAYVGLAGFFRSSALEGGLSDIIDHVPWNNLFLIVIAMPVLATIVGWVLAGRDPTGLATRPME*
Ga0182018_1064604013300014489PalsaLAGWFYSNSLEGGLSNIIDHVPWINLSLIVIAMPVVAMIVGWVLAGRDPTGLSTRPME*
Ga0182024_1268212613300014501PermafrostNLFLIVIAMPVAAALIGWVLAGREPRGMATRPME*
Ga0181536_1025826423300014638BogGLRLGAHVPWSNLFLIVIAMPIVAAAVGWVLAGRDPRGISTGPME*
Ga0182030_1024212433300014838BogGALLGTVAAYIGLIGWFRSNALEGGVSDIIDHVPWNNLFFILIAMPLVATVIGWVLAGRNPKGISSRPVE*
Ga0182041_1003454013300016294SoilEGGVSDIIDHVPWTNLFLIVVAMPLAAAVIGWVLAGREPSGIGSRPME
Ga0187879_1083638213300017946PeatlandVGLAGWFHTNALEGGVSDIIDHIPWNNLFLIVIAMPVVAALVGWVLAGRDPTGISTRPME
Ga0187880_130658523300018016PeatlandRLGAHVPWSNLFLIVIAMPIVAAAVGWVLAGRDPRGISTRPME
Ga0187867_1041166013300018033PeatlandALEGGLSDIIEHIPGSNLFLIVIAMPVVAAMVGWVLAGRDPTGIATRPME
Ga0187871_1067885713300018042PeatlandNALEGGVSDIIHHIPWNNLFLIVIAMPIAAGIVGWALAGREPTGLSTRPME
Ga0187858_1011855333300018057PeatlandLLGTVAAYVGLAGWFHTNALEGGLSNIIDHIPWSNLFLIVIAMPVAAAVVGWVLAGREPTGLSTRPLE
Ga0210396_1040153813300021180SoilLFGFFRANSLEGGVSDLINNVPWNNLFFILIAMPAAAVLIGWVLAGREPRAIATRPME
Ga0210388_1097705713300021181SoilANSLEGGVSDLINNVPWNNLFFILIAMPAAAVLIGWVLAGREPRAISSRPME
Ga0208480_108779613300025633Arctic Peat SoilIDHVPWNNLFLIVIAMPVLASLVGWLLAGRQPEGIARRPTE
Ga0209007_109590723300027652Forest SoilFRSNSLEGGVSDIIDHVPWNNLFLILVALPIAAALIGWVLAGREPTGIGTRPME
Ga0209626_109527113300027684Forest SoilIPWSNLILIVIAMPVAATLIGWVLAGRDPRGIATRPME
Ga0209380_1011435413300027889SoilRTNALEGGVSDIIDHIPWSNLFLIVIAMPIVAMLVGWVLAGRDPTGISTRPME
Ga0209006_1076015633300027908Forest SoilEGGVSDIINHVPWDNLFLIVIAMPLVATLIGWVLAGREPSGIATRPME
Ga0308309_1084443223300028906SoilLEGGLSDIIDHIPWSNLFLIVVAMPIVATLVGWVLAGRDPTGISARPME
Ga0311363_1132823723300029922FenLLGTVAAYIGLFGWFRANSLEGGVSDIIDHVPWDNLFFILIAMPLVATLVGWVLAGRDPSAIASRPME
Ga0311331_1073853433300029954BogWINLLLIVIAMPVIATIVGWMLAGRDPSRISTRPME
Ga0311339_1110017923300029999PalsaNIVDHVPWNNLFFIVVAMPAVAMIVGWLLAGREPTGIASRPME
Ga0302178_1018261413300030013PalsaGLFGWFRSNALEGGVSDIIHHVPWDNLFFILIAMPVVAVLIGWMLAGREPTGIGTRPME
Ga0311355_1085382413300030580PalsaWSNLFLIVIAMPVLAAIVAFVLAGRDPTGLSTRPME
Ga0311354_1011284213300030618PalsaAYLGLFGWFRSNALEGGVSDIIDHVPWDSLFFIVIAMPLVATLVGWVLAGREPSSIATRPLE
Ga0310038_1012062523300030707Peatlands SoilLGTVAAYVGLFGWFRSNQLEGGVSDIIDHVPWNNLFLILIAMPVVAALIGWVLAGRDPKGIATRPME
Ga0302311_1028408813300030739PalsaALLGTVAAYVGLAGWFHSNALEGGLSDIIDHIPWSNLFLIVIAMPVAAAVVGWVLAGRDPTGISSRPME
Ga0302312_1039336123300030746PalsaNALEGGVSDIIDHVPWDNLFFILIAMPVVAILIGWVLAGREPRGISTRPME
Ga0265720_102641923300030764SoilSDVIDHVPWDNLFFIVIAMPVVATLVGWVLAGREPSGIASRPLE
Ga0265753_111485523300030862SoilEGGVSDIINHVPWDNLFLIVIAMPLVATLIGWVLAGRDPTGIATRPME
Ga0302180_1051312623300031028PalsaIHHVPWDNLFFILIAMPVVAVLIGWMLAGREPTGIGTRPME
Ga0265760_1003926213300031090SoilLEGGLSTVINHIPWTNLSLIVIAMPVVATIVGWVLAGRDPTGISTRPME
Ga0302307_1002208513300031233PalsaHAPWENLFFILIAMPVVAVLIGWVLAGREPTGIGSRPME
Ga0302325_1103859713300031234PalsaDIIDHIPWNNLFLVVIAMPIVAMIIGWALAGRDPTGISTRPME
Ga0302325_1220143213300031234PalsaGVSDIIDHVPWDNLFFILIAMPIVATLIGWVLAGREPTRIGTRPIE
Ga0302325_1255448123300031234PalsaAHIPWTNLFLIVIAMPVVAAVVGWVLAGRDPTGLSTRPME
Ga0302325_1315050223300031234PalsaNALEGGLSDIIDHIPWSNLFLIVIAMPVVAAAVGWVLAGRDPTGISSRPME
Ga0302326_10003527353300031525PalsaTVAAYVGLAGWFHSNALEGGLSDIIDHIPWSNLFLIVIAMPVAAAVVGWVLAGRDPTGISSRPME
Ga0302326_1066205413300031525PalsaPWDNLFFILIAMPVAAVLIGWVLAGREPAGIGTRPME
Ga0302326_1254061113300031525PalsaPWDNLFLIVIAMPVVALIVGWVLAGRDPTGLSTRPIE
Ga0318516_1074912813300031543SoilSDIIHHVPWNNLFLILIAMPVAATLIGWLLAGREPRGIATRPME
Ga0318534_1022709613300031544SoilLADLYGHIPWANLFLIVIAMPIAATLIGWVLAGREPTGIATRWSS
Ga0318561_1041408523300031679SoilYNHVPWGNLFLIVIAMPIAAMAIGWVLAGREPKGIATRPME
Ga0318572_1024667613300031681SoilVGLFGWFRSNTTEGGVSDIIYHVPWTNLFLIVIAMPIAAAVIGWVLAGREPSGIGTRPME
Ga0310686_10181165733300031708SoilGYIGLFGFFRSNPLEGGVSDIINHVPWDNLFFILIAMPVVATLIGWVLAGREPTGIGSRPME
Ga0318501_1085300213300031736SoilGHIPWANLFLIVIAMPIAATLIGWVLAGREPKGIATRPME
Ga0318492_1041489523300031748SoilPWTNLFLIVIAMPIAAAVIGWVLAGREPSGIGTRPME
Ga0318494_1039955513300031751SoilWNHLFLILIVMPAAAVVIGWVLAGREPRGISTRPME
Ga0318494_1077684823300031751SoilQLEGGLSDIVNHVPWSNLFLLVIAMPIAAALIGWVLAGREPADIATRPME
Ga0318537_1034092923300031763SoilHVPWGNLFLIVIAMPIAAMAIGWVLAGREPKGIATRPME
Ga0318535_1006151813300031764SoilFGWFQTNSLEGGLSDLTNNVPWNHLFLILIVMPAAAVVIGWVLAGREPRGISTRPME
Ga0318554_1036825433300031765SoilLSDLTNNVPWNHLFLILIVMPAAAVVIGWVLAGREPRGISTRPME
Ga0318546_1044149833300031771SoilGGLPDLYGHIPWTNLFLIVIAMPIAATLIGWVLAGREPTGIATRPLE
Ga0318543_1010226513300031777SoilSDLTNNVPWNHLFLILIVMPAAAVVIGWVLAGREPRGISTRPME
Ga0318566_1066979713300031779SoilLGTVAAYVGLAGFFRSNQLEGGLSDIVNHVPWSNLFLLVIAMPIAAALIGWVLAGREPADIATRPME
Ga0318547_1064583623300031781SoilFNTNQQEGGVSDIINHVPWNNLFLILIVMPVAAALIGWVLAGREPRGIATRPME
Ga0318511_1041543713300031845SoilALLGTVAAYVGLAGFFRANSLEGGLSDLYGHIPWTNLFLIVIAMPIAATLIGWVLAGREPTGIATRPLE
Ga0318512_1014679213300031846SoilLFGWFRSNTTEGGVSDIIYHVPWTNLFLIVIAMPIAAAVIGWVLAGREPSGIGTRPME
Ga0318495_1034746223300031860SoilQLEGGLSDIYNHVPWGNLFLIVIAMPIAAMAIGWVLAGREPKGIATRPME
Ga0318495_1048516523300031860SoilLSDLTNNVPWSHLFFILIAMPAAAVLIGWVLAGREPQGIATRPME
Ga0306925_1132116413300031890SoilLFGWFRSNTLEGGVSDIIDHVPWTNLFLIVVAMPLAAAVIGWVLAGREPSGIGSRPME
Ga0318536_1058071713300031893SoilEGGLSDIVNHVPWSNLFLLVIAMPIAAALIGWVLAGREPADIATRPME
Ga0306923_1228177613300031910SoilSDIVNHVPWSNLFLLVIAMPIAAALIGWVLAGREPADIATRPME
Ga0310912_1071194913300031941SoilLYGHIPWTNLFLIVIAMPIAATLIGWVLAGREPTGIATRPLE
Ga0306922_1011285543300032001SoilVSDIIDHVPWTNLFLIVIAMPLAAAVIGWVLAGREPSGIGSRPME
Ga0318549_1035768223300032041SoilVPWNHLFLILIVMPAAAVVIGWVLAGREPRGISTRPME
Ga0318549_1056880423300032041SoilHVPWSNLFLLVIAMPIAAALIGWVLAGREPADIATRPME
Ga0318556_1039283123300032043SoilTGWFRSNSLEGGLADLYGHIPWANLFLIVIAMPIAATLIGWVLAGREPTGIATRWSS
Ga0318575_1005310933300032055SoilHVPWTNLFLIVIAMPIAAAVIGWVLAGREPSGIGTRPME
Ga0318575_1019090813300032055SoilLEGGVSDIIDHVPWTNLFLIVVAMPLAAAVIGWVLAGREPSGIGSRPME
Ga0318575_1025164833300032055SoilLEGGLPDLYGHIPWTNLFLIVIAMPIAATLIGWVLAGREPTGIATRPLE
Ga0318504_1059981423300032063SoilSNSLEGGLADLYGHIPWANLFLIVIAMPIAATLIGWVLAGREPTGIATRWSS
Ga0318513_1011334113300032065SoilIDHVPWTNLFLIVVAMPLAAAVIGWVLAGREPSGIGSRPME
Ga0318524_1073528123300032067SoilIYNHVPWGNLFLIVIAMPIAAMAIGWVLAGREPKGIATRPME
Ga0311301_1234897723300032160Peatlands SoilVARRTVVASLEGGLSDIIDHIPWSNLFLIVIAMPVVATIVGWVLAGRDPTGISTRPME
Ga0311301_1251989123300032160Peatlands SoilALEGGVSDIIDHVPWDNLFLILIAMPVAAMLIGYVLAGREPKGIATRPME
Ga0306920_10334292213300032261SoilEGGVSDIVNHVPWNNLFLILIVMPVAATLIGWVLAGREPQGIATRPME
Ga0335074_1157901823300032895SoilFRTNALEGGLSDVIDHVPWTNLFLIVIAMPVVAALIGWALAGREPTGIATRPLE
Ga0335075_1056324323300032896SoilGVSDIIDHVPWNNLFFILIAMPAVAVVIGWVLAGREPRGIGTRPIE
Ga0335075_1124547113300032896SoilGLFGWFRSNALEGGISDIINHVPWNNLFFILIAMPAFAVVIGWALAGREPTGIGTRPIE
Ga0335072_1002923113300032898SoilGGVSDVIDHIPWDNLFLILIAMPAAAVLIGWVLAGREPSGIASRPSE
Ga0370483_0157470_594_7643300034124Untreated Peat SoilGWFRSNNLEGGLSDIIDHIPWSNLFLIVVAMPAVAMIVGWALAGRDPAAIAARPME


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