Metagenome / Metatranscriptome Family F095785

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095785
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	74 residues
Representative Sequence	MRESYWKLRARMTAAGLWPEGWIARGACYSLGLAIGLFVLEMLLKLIAPAASDSLGGWVKFLVFDAALL
Number of Associated Samples	88
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.05 %
% of genes near scaffold ends (potentially truncated)	99.05 %
% of genes from short scaffolds (< 2000 bps)	82.86 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.143 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.82% β-sheet: 0.00% Coil/Unstructured: 39.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF07992	Pyr_redox_2	13.33
PF03544	TonB_C	2.86
PF14321	DUF4382	0.95
PF04909	Amidohydro_2	0.95
PF07228	SpoIIE	0.95
PF01019	G_glu_transpept	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	2.86
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.43 %
Unclassified	root	N/A	48.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.43 %
Unclassified	root	N/A	48.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.43 %
Unclassified	root	N/A	48.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.57 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	28.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.57 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	28.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.57 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	28.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.14 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.14 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10018175	Not Available	1859	Open in IMG/M
3300002245\|JGIcombinedJ26739_100718158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	878	Open in IMG/M
3300002245\|JGIcombinedJ26739_100930853	Not Available	752	Open in IMG/M
3300002917\|JGI25616J43925_10312244	Not Available	584	Open in IMG/M
3300004091\|Ga0062387_100346300	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	978	Open in IMG/M
3300004092\|Ga0062389_101667278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	819	Open in IMG/M
3300005167\|Ga0066672_10993684	Not Available	513	Open in IMG/M
3300005541\|Ga0070733_10036744	Not Available	3057	Open in IMG/M
3300005591\|Ga0070761_10347638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	898	Open in IMG/M
3300005610\|Ga0070763_10124029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1326	Open in IMG/M
3300005712\|Ga0070764_10458814	Not Available	761	Open in IMG/M
3300005921\|Ga0070766_11231897	Not Available	518	Open in IMG/M
3300006176\|Ga0070765_101018006	Not Available	783	Open in IMG/M
3300006176\|Ga0070765_101149272	Not Available	733	Open in IMG/M
3300009089\|Ga0099828_10148332	Not Available	2070	Open in IMG/M
3300009521\|Ga0116222_1415859	Not Available	585	Open in IMG/M
3300009522\|Ga0116218_1381187	Not Available	630	Open in IMG/M
3300009524\|Ga0116225_1214331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300009624\|Ga0116105_1116360	Not Available	683	Open in IMG/M
3300009644\|Ga0116121_1221975	Not Available	603	Open in IMG/M
3300009645\|Ga0116106_1178228	Not Available	677	Open in IMG/M
3300009698\|Ga0116216_10857289	Not Available	544	Open in IMG/M
3300009759\|Ga0116101_1022102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1254	Open in IMG/M
3300011120\|Ga0150983_10819581	Not Available	566	Open in IMG/M
3300011269\|Ga0137392_10296165	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1337	Open in IMG/M
3300012189\|Ga0137388_11517892	Not Available	607	Open in IMG/M
3300012683\|Ga0137398_10385264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300012924\|Ga0137413_10479674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300014160\|Ga0181517_10236270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300014161\|Ga0181529_10456172	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300014169\|Ga0181531_10006124	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7114	Open in IMG/M
3300014169\|Ga0181531_10323311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300014201\|Ga0181537_10939372	Not Available	586	Open in IMG/M
3300014489\|Ga0182018_10061063	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2276	Open in IMG/M
3300014495\|Ga0182015_10006088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	12236	Open in IMG/M
3300014501\|Ga0182024_10152777	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3240	Open in IMG/M
3300016698\|Ga0181503_1254597	Not Available	549	Open in IMG/M
3300017938\|Ga0187854_10303411	Not Available	682	Open in IMG/M
3300018006\|Ga0187804_10491594	Not Available	551	Open in IMG/M
3300018008\|Ga0187888_1154889	Not Available	935	Open in IMG/M
3300018020\|Ga0187861_10413744	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300018090\|Ga0187770_11287554	Not Available	592	Open in IMG/M
3300020580\|Ga0210403_10493456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300020581\|Ga0210399_10649794	Not Available	870	Open in IMG/M
3300020583\|Ga0210401_10111305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2569	Open in IMG/M
3300021171\|Ga0210405_10052545	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3223	Open in IMG/M
3300021180\|Ga0210396_10111160	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2475	Open in IMG/M
3300021180\|Ga0210396_11475300	Not Available	560	Open in IMG/M
3300021402\|Ga0210385_10185500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1506	Open in IMG/M
3300021405\|Ga0210387_10014021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6193	Open in IMG/M
3300021405\|Ga0210387_10046201	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3490	Open in IMG/M
3300021407\|Ga0210383_10493950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1057	Open in IMG/M
3300021407\|Ga0210383_11040151	Not Available	693	Open in IMG/M
3300021407\|Ga0210383_11758960	Not Available	506	Open in IMG/M
3300021420\|Ga0210394_10899759	Not Available	770	Open in IMG/M
3300021420\|Ga0210394_11022457	Not Available	715	Open in IMG/M
3300021420\|Ga0210394_11113635	Not Available	680	Open in IMG/M
3300021433\|Ga0210391_10261945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1357	Open in IMG/M
3300021474\|Ga0210390_10208878	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1651	Open in IMG/M
3300021475\|Ga0210392_10938933	Not Available	647	Open in IMG/M
3300022557\|Ga0212123_10036107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4901	Open in IMG/M
3300022734\|Ga0224571_110557	Not Available	640	Open in IMG/M
3300023250\|Ga0224544_1060827	Not Available	546	Open in IMG/M
3300024227\|Ga0228598_1023702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M
3300024271\|Ga0224564_1033553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300026548\|Ga0209161_10022247	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4521	Open in IMG/M
3300027297\|Ga0208241_1052667	Not Available	646	Open in IMG/M
3300027505\|Ga0209218_1094640	Not Available	623	Open in IMG/M
3300027545\|Ga0209008_1045003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300027562\|Ga0209735_1000203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10075	Open in IMG/M
3300027698\|Ga0209446_1078229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300027879\|Ga0209169_10320361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300028016\|Ga0265354_1008709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300028017\|Ga0265356_1007579	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1249	Open in IMG/M
3300028775\|Ga0302231_10373350	Not Available	600	Open in IMG/M
3300028789\|Ga0302232_10314917	Not Available	772	Open in IMG/M
3300028795\|Ga0302227_10366478	Not Available	547	Open in IMG/M
3300028798\|Ga0302222_10148275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300028808\|Ga0302228_10336305	Not Available	674	Open in IMG/M
3300028873\|Ga0302197_10140865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1170	Open in IMG/M
3300028882\|Ga0302154_10410607	Not Available	651	Open in IMG/M
3300028906\|Ga0308309_10166165	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1789	Open in IMG/M
3300028906\|Ga0308309_10745574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300028906\|Ga0308309_11798577	Not Available	518	Open in IMG/M
3300029943\|Ga0311340_10146549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2480	Open in IMG/M
3300029943\|Ga0311340_10351605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1376	Open in IMG/M
3300029943\|Ga0311340_10817162	Not Available	784	Open in IMG/M
3300029943\|Ga0311340_10888716	Not Available	742	Open in IMG/M
3300029945\|Ga0311330_11120639	Not Available	574	Open in IMG/M
3300029952\|Ga0311346_11268849	Not Available	568	Open in IMG/M
3300029993\|Ga0302304_10097328	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1129	Open in IMG/M
3300030056\|Ga0302181_10124182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1255	Open in IMG/M
3300030490\|Ga0302184_10279305	Not Available	676	Open in IMG/M
3300030520\|Ga0311372_10277412	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2679	Open in IMG/M
3300030739\|Ga0302311_10994009	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300031234\|Ga0302325_13223632	Not Available	520	Open in IMG/M
3300031708\|Ga0310686_100277391	All Organisms → cellular organisms → Bacteria	3258	Open in IMG/M
3300031708\|Ga0310686_107998909	Not Available	704	Open in IMG/M
3300031708\|Ga0310686_111910314	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300031708\|Ga0310686_119660879	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031720\|Ga0307469_10052134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2579	Open in IMG/M
3300031754\|Ga0307475_10420703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1074	Open in IMG/M
3300032896\|Ga0335075_11716355	Not Available	509	Open in IMG/M
3300033134\|Ga0335073_10757608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300033547\|Ga0316212_1057537	Not Available	558	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.24%
Host-Associated	Host-Associated	4.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.10%
Aquatic	Environmental → Aquatic	17.14%
Plants	Host-Associated → Plants	4.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.05%
Peat	Environmental → Terrestrial → Peat	19.05%
Freshwater	Environmental → Aquatic → Freshwater	16.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.81%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.95%
Roots	Host-Associated → Plants → Roots	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	19.05%
Loam	Environmental → Terrestrial → Soil → Loam	17.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.90%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.05%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	19.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.43%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.14%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.29%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.81%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.90%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.95%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.95%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.95%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.95%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016698	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_100181754	3300001471	Forest Soil	MRESYWKLRARIVAAGLWPHGWIARGGCYSLGLAIGLFVLQMLLRLVAPAASESLGGWVKFLLFDAALLF
JGIcombinedJ26739_1007181581	3300002245	Forest Soil	MREFYWKNRARLLTAGLWPQGWIARGACYSLGLAIGLFVLEMLLTLFAPAAGDSLGGWVKFLVFDASLLFAILAFRVLKRR
JGIcombinedJ26739_1009308531	3300002245	Forest Soil	MRETYWKWRERMVAAGLWPRGWVARGAWYSLGLAVALFALQMVLLLVVPKWADGLGGWVRFLLFDAA
JGI25616J43925_103122442	3300002917	Grasslands Soil	MKKSYWKSRARLQAAGLWPQGWVARGACYSLGLALALFALEMLLKLIAPKWSDSLGGWVKFLVFD
Ga0062387_1003463003	3300004091	Bog Forest Soil	MRDFYWKLRARMQAADLWPQGWIARGACYSLGLAAGLFALEMLLKVFAPRWGDSLGG
Ga0062389_1016672781	3300004092	Bog Forest Soil	MLAADLWPQGWVARGACYSLAFALGLFVLQAVLNLFAPAAAASIGGWIKFLVFDAALLF
Ga0066672_109936842	3300005167	Soil	MRKFYQQLRARIIAAGFWPGGWIARGACYSLLFAIGLFALQEILELIVPRWADTLGGWVKFLLFDAALLGCILAYR
Ga0070733_100367441	3300005541	Surface Soil	MLAAGLWPQGWIARGACYSLGLAVGLFVLQMVLNLFVPAWAGSIGGWVKFLVFDAALLFSIVAFRWLRW
Ga0070761_103476383	3300005591	Soil	MRDFYWKLRTRMLAAGLWPQGWIARGACYSLGFAAGLFALQMLLRLIAPAWGNSISGWVKFLVFDAALLFSIVAFRWLRRKLLWRLRNRLI
Ga0070763_101240293	3300005610	Soil	MKQFYSRLRGRMLAAGLWPQGWVARGACYSLAFALGLLLLQMLLKLFAPAAAASIGGWVKFLVFDAALLFSIVAFRWLKRK
Ga0070764_104588141	3300005712	Soil	MKQLYWNLRARMLTAGLWPQGWVARGACYSLGLAVGLFMLQMLLILPAPKASDSLAGWVKFLIF
Ga0070766_112318971	3300005921	Soil	MREAYWQLRTKMQAAGVWPQGWVARGACYSLILAVALFALEMVLKLFAPKWSDGLDGWVK
Ga0070765_1010180061	3300006176	Soil	MRDAYWKLRARMTAAGLWPQGWIARGAWYSLGLAAGLFILEMVLKVFASAASSSLGGWVR
Ga0070765_1011492723	3300006176	Soil	MKQFYSNLRARMLAADLWPQGWVARGACYSLGFALGLLVLQMVLNLCAPAAAASIGGWVKFLIFDAALLFSIVAFRWLKRK
Ga0099828_101483321	3300009089	Vadose Zone Soil	MKKSYWKLRARLQAAGHWPQGWVARGACYSLGLALALFALEMLLKLIAPKWSDSLGGWVKFLVFDAALLFSVVAFRV
Ga0116222_14158591	3300009521	Peatlands Soil	MRQSFSKLRERMLTAGFWPQGWVARGACYSLGLAIGFFSLQMLLKLFAPAAAASIGGWDKFLIFVAALL
Ga0116218_13811872	3300009522	Peatlands Soil	MLAAGLWPQGWIARGACYSLGFAIGLFVLEMLLKLFAPRAADNIGFWVKFLLFDAALLFSIV
Ga0116225_12143311	3300009524	Peatlands Soil	MREFYWNLRARMLAAGLWPQGWIARGACYSLGLAIGLFALQLLLKLVAPASSNSLGGWVKFLV
Ga0116105_11163603	3300009624	Peatland	MKQFYWNLRARMTTAGLWPHGWVARGACYSLGSAIGLFILAMLLKLVAPKASDSLGGWVKFLLFDAAVLFSIL
Ga0116121_12219751	3300009644	Peatland	MREFYWKSRARMMAAGLWPKGWIARGACYSLGLAIGLLVLELLLKRLAPVASDSLGGWVKFLL
Ga0116106_11782282	3300009645	Peatland	MREAYWKLRARMTAAGLWPQGWIARGAWYSLGLAVGLFVLQMLLRLFLPKASDSLGGWVKFLLFDAALLFSILAFRGMKRKLLW
Ga0116216_108572892	3300009698	Peatlands Soil	MRQSFSKLRERMLAAGFWPQGWVARGACYSLGLAIGFFALQMLLKLFAPAAAASIGGWVKFLIFVAALLFSILAFRWLKRKLLWRL
Ga0116101_10221021	3300009759	Peatland	MLWGLPSADIMREFYAHFRARLTAAELWPQGWVARGACYSLGLAIGLFVLELLLKMIAPAASESLEGWVKFLLFDAALLGCIVAFRFLRRRILWRLRNRL
Ga0150983_108195811	3300011120	Forest Soil	MREFYWKNRARLLTAGLWPQGWIARGACYSLGLAIGLFVLEMLLTLFAPAASDSLAGWVKFLIFDASLLFAILAFRALKRRVLWRLRNR
Ga0137392_102961653	3300011269	Vadose Zone Soil	MRESYWKMRARIQAAGFWPQGWVARGACYSLGLALALFALEMLLKLLAPKWSDSLGGWVKFLVF
Ga0137388_115178922	3300012189	Vadose Zone Soil	MKKSYWKSRARLQAAGLWPQGWVARGACYSLGLALALFALEMLLKLIAPKWSDSLGGWVKFLVF
Ga0137398_103852641	3300012683	Vadose Zone Soil	MRSSYWEVRERLLTAGLWPQGWISRGACYSLGLAVALFALEMLLKLVAPKWSDSLGGWVKFLLFDAALLFSIVAFRGLK
Ga0137413_104796741	3300012924	Vadose Zone Soil	MLTAGIWPQGWIARGACYSLGLAIALFALEMLLKLVAPKWSDSLGGWVNFLLFDAALLFCIVAFRGLKRKVLWRLRN
Ga0181517_102362701	3300014160	Bog	MREAYWKLRARMTAAGLWPQGWIARGAWYSLGLAVGLFVLQMLLRLFLPKASDSLGGW
Ga0181529_104561722	3300014161	Bog	MREAYWKLRARMTAAGLWPQGWIARGAWYSLGLAVGLFVLQMLLRLFLPKASDSLGGWVKFLLFDAALLFSILAFRGMKRKLLWRLRNRL
Ga0181531_100061241	3300014169	Bog	MRKSYLELRGRLLAAGIWPRGWVARGACYSLALAIVFFALQMLLKLLAPKWSDSLGGWVKFLLFDAAL
Ga0181531_103233113	3300014169	Bog	MLAAGWWPQGWIARGAWYSLGFAIGLFVLRMLMKPVAPAAAQSVEGWVKFLLIDAALLFSIIAFRWLRRRILWRLRNR
Ga0181537_109393721	3300014201	Bog	MRELYWKLRARLSSAGLWPQGWIARGACYSLGLAIFLFALEVILNMFAPAASSSLGGWVKFLLFDAAMLFSILAFRALKGKILWRLRN
Ga0182018_100610635	3300014489	Palsa	MRELYSKLRARMRMAGLWPQGWIAHGAWYSLGLAAGLFVLEMLLKLFAPKWGDSLGGWVKFLLFDAASLFFIVAFRALRRKILWRLRNR
Ga0182015_100060881	3300014495	Palsa	MKQFYSRLRGKMLAADLWPQGWVARGACYSLGFALALLVLQMLLKLFAPVAADSIGGWVKFLVF
Ga0182024_101527771	3300014501	Permafrost	MREFYWKNRARLLTAGLWPQGWIARGACYSLGLAIGLFVLEMLLSLFAPAAGDSLGGWVKFLVFDASLLFAILAFRVLKR
Ga0181503_12545971	3300016698	Peatland	MREAYWKLRARMTVAGLWPQGWIARGAWYSLGLAVGLFVLQMLLRLFLPKASDSLGGWVKFLLFDAALLFSILAF
Ga0187854_103034111	3300017938	Peatland	MRESYWKLRARMTAAGLWPEGWIARGACYSLGLAIGLFVLEMLLKLIAPAASDSLGGWVKFLVFDAALL
Ga0187804_104915942	3300018006	Freshwater Sediment	MKQFYWKLRARMLAAGLWPQGWVARGACYALVLAAGLFVLQMLLKLVAPAASNSLGGWVKFLAFDAALLFSILAFRWLK
Ga0187888_11548891	3300018008	Peatland	MLWGLPSADIMREFYAHFRARLTAAELWPQGWVARGACYSLGLAIGLFVLELLLKMIAPAASESLEGWVKFLLFDAALLGCIVAFRFLRRRILWRLRNR
Ga0187861_104137441	3300018020	Peatland	MRESYWKLRARMTAAGLWPEGWIARGACYSLGLAIGLFVLEMLLKLIAPAASDSLGGWVKFLVFDAALLFFILAFRWLKRRILWR
Ga0187770_112875542	3300018090	Tropical Peatland	MPTSYANWRARMIAAGVWPQGWVARGAWYCLGLAIVLFVLEMLLRLVAPVWSGSLAGWVEFLLYDAAILFVILGFRWLKRK
Ga0210403_104934563	3300020580	Soil	MKQFYSRLRARMLAADLWPQGWVARGALYSMGLAIGLFALEMVLKPFAPAAADSLGGWVKFLVFDTALLFSV
Ga0210399_106497943	3300020581	Soil	MRKFYLQLRARIIAAGFWPRGWVARGACYSLLFAIALFALQMILQLFAPAWADSLSGWVKFLLFDASLLFCILAFRWLKRK
Ga0210401_101113051	3300020583	Soil	MQAAGLWPQGWVARGACYSLILAVGLFILEMLLKLVAPTASDSLGGWVTFLAFDAAVLFSILAFRALKRKILWRLR
Ga0210405_100525456	3300021171	Soil	MRKSFLELRGRMLAAGLWPQGWVARGACYSLGLAVVLFALEMLLKLLAPKLSDSLGGWVKFLVIDAALLFSVVAFRWLKR
Ga0210396_101111604	3300021180	Soil	MLVAGWWPRGWIARGACYSLALAIALFALEMLLRLFAPKWSDSLGGWVKFLLFDATLLFSIVAFRGLKRKVL
Ga0210396_114753002	3300021180	Soil	MREAYWQLRTKMQAAGVWPQGWVARGACYSLILAVALFALEMVLKLFAPKWSDGLDGWVKFLLFDAALLFFIVAFRTLRRRVLWR
Ga0210385_101855001	3300021402	Soil	MRDAYLKLRGRLLAEGLWPRGWIARGACYSLVFAVGLFALEMLLKLFAPAWSDSLGGWVKFLLIDAALL
Ga0210387_100140218	3300021405	Soil	MQAAGLWPQGWVARGACYSLILAVGLFILEMLLKLVAPTASDSLGGWVTFLAFDAAVLFSILAFRALKRKI
Ga0210387_100462015	3300021405	Soil	MREAYWQLRTKMQAAGVWPQGWVARGACYSLILAVALFALEMVLKLFAPKWSDGLDGWVKFLLFD
Ga0210383_104939503	3300021407	Soil	MKQFYSNLRARMLAADLWPQGWVARGACYSLGFALGLLVLQMVLNLFAPAAAASIGGWVKFLIFDAALLFSI
Ga0210383_110401511	3300021407	Soil	MRESYWKLRARILAAGLWPQGWIARGACYSLGFAAGLFALQMLLRLIAPAWGNNISGWVKFLVFDAALLFSIVAFRW
Ga0210383_117589602	3300021407	Soil	MKQFYSKLRARMLAADLWPQGWIARGALYSLGFAIGLFALEMVLKLFAPAAADSLAGWVKFLVFDAALLFSVVAFRWL
Ga0210394_108997591	3300021420	Soil	MRKSYWKLRARMLAAGLWPQGWIARGACYSLGLAVGFFALQMLLKLLAPGWSDSLGGWVRFLLFDAALLFSILAFRWLKRK
Ga0210394_110224573	3300021420	Soil	MKQFYSRFRARMLAADLWPQGWVARGACYSLAFALGLLGLQTVLKLFAPAAAASIGGWIKFLVFDAALLFS
Ga0210394_111136351	3300021420	Soil	MKQIYWTLRERMLTAGMWPQGWVARGACYSLGLAIVLFVLEMLLKLVAPAASDSLG
Ga0210391_102619451	3300021433	Soil	MREVYWKLRAQMTAAGWWPQGWIARGACYSLALALLLLVLEMVLSLVAPAATRGLGGWIKFLIFDAALLFSIVAFRVLKRKILWRLRN
Ga0210390_102088784	3300021474	Soil	MKQFYSRLRGRMLAADLWPQGWIARGACYSLGFALGLLVLQMLLKLLAPAAADSIGGWVK
Ga0210392_109389333	3300021475	Soil	MRKSYLKLRARMLAAGLWPQGWVARGACYSFGFAIGLFALQLALKLFAPASAESIGGWVKFLLFDAALLFSI
Ga0212123_100361077	3300022557	Iron-Sulfur Acid Spring	MREAYWKLRARMTAAGLWPQGWIARGAWYSLGLAVGLFVLQMLLRLFLPKASDSLGGWVKFLLFDAALLFSI
Ga0224571_1105571	3300022734	Rhizosphere	MRESYWKVRERMLAAGLWPQGWIARGAWYSLSFAIGLFALQLSLKLLAPAAADSIGVWVKFLVFDTALLFCIVAFRLLKRKI
Ga0224544_10608272	3300023250	Soil	MKQFYWKLRERMLTAGMWPQGWIARGACYSLGLAVGLFVLEMLLKLVAPAASDSLGGWVKFLAFD
Ga0228598_10237023	3300024227	Rhizosphere	MRESYSKLRARMLAAGLWPQGWVARGACYSLCFAIGLFALQLLLKLFAPGSADSIGGWVKFLVFDA
Ga0224564_10335533	3300024271	Soil	MRESYWKLRARLLEAGLWPQGWVARGAWYSLVSAIGLLFLELLLDLFAPAIGQSLGGWIKFLIFDAA
Ga0209161_100222477	3300026548	Soil	MALSYPFVRRSLRQAGLWPEGGIARAAWYSLGLAGVLFVVALLLRWVAPAWGSSIGWWVKFLVFDAAMLFAIVAFRWLKKKLLWRLRNRLIVT
Ga0208241_10526671	3300027297	Forest Soil	MREVYWKLRAQMTAAGWWPQGWIARGACYSLALALLLLVLEMVLSLVAPAATRGLGGWIKFLIFDA
Ga0209218_10946403	3300027505	Forest Soil	MREFYWKNRARLFTAGLWPQGWIARGACYSLGLAIGLFVLEMLLTLFAPAAGDSLAGWVK
Ga0209008_10450033	3300027545	Forest Soil	MREFYWKNRARLFTAGLWPQGWVARGACYSLGLAIGLFVLEMLLTLFAPAAGDSLAGWVKFLIFDASLLFAILAF
Ga0209735_10002031	3300027562	Forest Soil	MQAAGLWPRGWVARGACYSLGLSAALFALQMLLTPFAPKWADSLGGWVKFLLFDAALLFSIVAF
Ga0209446_10782293	3300027698	Bog Forest Soil	MLAAGFWPQGWIARGACYSLAFALGLLILQAVLRLFAPAAAASISGWIKFLVFDAALLFSIVAFRWLKRKLLWRLRNRL
Ga0209169_103203611	3300027879	Soil	MKQFYSRLRARMLAADLWPQGWIARGALYSLGFAIGLFALEMLLKLFAPAAAASLGGWVKFLVFDAAALYS
Ga0265354_10087093	3300028016	Rhizosphere	MRESYWKLRARILAAGLWPQGWIARGACYSLGFAAGLFALQMLLRLIAPAWGNSISGWVKFLVFDAALLFSIVAFRWLRRKLLWRLRNRLI
Ga0265356_10075793	3300028017	Rhizosphere	VETRNDAEARGGIANTLHSEFMKRIYWKYRERMLAAGLWPQGWIARGACYSLGLAVILLLLEVVLQVFSPKWGDSLSGWVKFLLFDAALLFSIVAFRSLRRKVLWRLRN
Ga0302231_103733501	3300028775	Palsa	MRESYWKLRASLVTAGLWPQGWIARGACYSLGFAIGLFALQLLLQMFAPAAARSMGGWVKFLVFDAALLFS
Ga0302232_103149171	3300028789	Palsa	MREFYWKLRASMTAAGMWPQGWIAHGACYSLGLAVGLFILQMLLKLVAPKASDSLGG
Ga0302227_103664782	3300028795	Palsa	MERTEIMRELYSKLRARMRMAGLWPQGWIAHGAWYSLGLAAGLFVLEMLLKLFAPKWGDSLGGWVKF
Ga0302222_101482753	3300028798	Palsa	MRESYWKLRASLVTAGLWPQGWIARGACYSLGFAIGLFALQLLLQMFAPAAARSMGGWVKFLVFDAALLFSIVAFRWLK
Ga0302228_103363051	3300028808	Palsa	MKQFYWNLRARITTAGLWPHGWVARGAAYSLGSAIGLFILAMLLKLVAPKASDSLGGWVKFLLFDAAVLFSI
Ga0302197_101408651	3300028873	Bog	MLAAGWWPQGWIARGACYSLAFAIGLFALQLLLKMFAPAAAESIGGWVKFLVFDAALLFS
Ga0302154_104106071	3300028882	Bog	MLAAGWWPRGWVARGACYSLALAIVFFALQMLLKLLAPRWSDSLAGWVKFLLFDAALLFCIV
Ga0308309_101661654	3300028906	Soil	MREFYWKNRARLLTAGLWPQGWIARGACYSLGLALGLFVLEMLLTLFAPAAGDSLGGWVKFLVFDASLLFAIL
Ga0308309_107455741	3300028906	Soil	MRDAYWKLRARMTAAGLWPQGWIARGAWYSLGLAAGLFILEMVLKVFASAASSSLGGWVRFLLFDAALLFSILAF
Ga0308309_117985771	3300028906	Soil	MRESYWKLRARILAAGLWPQGWIARGACYSLGFAAGLFALQMLLRLIAPAWGNSISGWVKFLVFDAALLFSIVAFR
Ga0311340_101465491	3300029943	Palsa	MRMAGLWPLGWIAHGAWYSLGLAAGLFVLEMLLKLFAPKWGDSLGGWVKFLLFDAASLFSIVA
Ga0311340_103516051	3300029943	Palsa	MERTEIMRELYSKLRARMRMAGLWPQGWIAHGAWYSLGLAAGLFVLEMLLKLFAPKWGDSLGGWVKFLLFDAASLFFIVVFRALRRKILWRL
Ga0311340_108171623	3300029943	Palsa	MRDSYLKLRGRLLAAGWWPRGWIARGACYSLGFAIGLFVLQMLPLPFAPAWADSLRGWVKFLLYDAALLFFIVAFRTLR
Ga0311340_108887161	3300029943	Palsa	MLTAGWWPQGWIARGACYSLGLAIGLFVLEMLLKLVSHAASDSLEGWVKFLVFDAALLFS
Ga0311330_111206392	3300029945	Bog	MLAAGWWPQGWIARGACYSLAFAIGLFALQLLLKMFAPAAAASIGGWVKFLVFDAALLFSILAFR
Ga0311346_112688491	3300029952	Bog	MRQRYLTFRARMVAAGFWPQGWVARGACYSLAFAILLFVIQMLLTLMAPSWADSLGGWIKFLLFDAALLFCIVAFRTLRKKILWRLRNRL
Ga0302304_100973281	3300029993	Palsa	MKQFYWNLRARITTAGLWPHGWVARGAAYSLGSAIGLFILAMLLKLVAPKASDSLGGWVKFLLFDAA
Ga0302181_101241821	3300030056	Palsa	MREFYWKLRASMTAAGMWPQGWIAHGACYSLGLAVGLFILQMLLKLVAPKASDSLGGWVKFLV
Ga0302184_102793053	3300030490	Palsa	MKQFYWNLRARITTAGLWPHGWVARGAAYSLGSAIGLFILAMLLKLVAPKASDSLGGWVKFLLFDA
Ga0311372_102774122	3300030520	Palsa	MRESYWKLRASLVTAGLWPQGWIARGACYSLGFAIGLFALQLLLQMFAPAAARSMGGWVKFLVFDAALLFSIVAFRWLKRKILGACATG
Ga0302311_109940092	3300030739	Palsa	MREFYWKLRASMTAAGMWPQGWIAHGACYSLGLAVGLFILQMLLKLVAPKASDSLGGWVKFLVFDAAVLFSILAFRWLKRRLL
Ga0302325_132236322	3300031234	Palsa	MLAAGWWPRGWVARGACYSLALAIVFFALQMLLKLLAPRWSDSLAGWVKFLLFDAALLFCIVAFRHLRRKVLWRLRNR
Ga0310686_1002773911	3300031708	Soil	MREFYWKWRTQLVEAGLWPQGWIARGAWYSLILAIGLLILELLLKLFAPAASASLQGWVKFLLFDATLLFFIVAFRWLRRRILWRL
Ga0310686_1079989091	3300031708	Soil	MKKFYWKLRERMLTAGMWPQGWVARGACYSLAFAIGLFVLEMMLKPFASSASNSLGGWVKFLVFDAALLFSILAFRT
Ga0310686_1119103143	3300031708	Soil	MKQFYSRLRGKMLAADLWPQGWVARGACYSLGFALGLLVLQMLLKLFAPAAADSIEGWVKFLIFDAALLFSILAFRWLKRK
Ga0310686_1196608791	3300031708	Soil	MLVAGLWPQGWIARGACYSLGLAVGLFVLQMVLNLFAPAWAGSIGGWVKFLVFDAALLFSIVAFRWLKRKLLWRLRNRL
Ga0307469_100521344	3300031720	Hardwood Forest Soil	MKKSYWKLRARLQAAGLWPEGWITRGACYSLGLALALFALEMLLKLLAPKWSDSLGGWV
Ga0307475_104207031	3300031754	Hardwood Forest Soil	MRKSFLELRGRMLAAGLWPQGWVARGACYSLGFALGLLALQMVLKLFAPAAAASIGGWVKFLVFDAAL
Ga0335075_117163551	3300032896	Soil	MRELYWKCRARIVAAGLWPQGWVGRGAYYSAALAVGLFILQILLKLFSPAWGDSLTGWIQFLVFDAALLFSISFFRV
Ga0335073_107576081	3300033134	Soil	MRDFYWKWRAWMLEKGLWPHGWVARGACYSLVLAIALYALELLLGLFAPAASSGLTGWVKFLLFDAALLFAILAFRWSRRRVLWRLRNR
Ga0316212_10575372	3300033547	Roots	MKQFYSLRARMLAADLWPQGWVARGALYSLAFATALFALQMGLKPFAPAAADSLAGWVKFLAFDAALLFSIVAFRWLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095785

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences