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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F095757 |
| Family Type | Metagenome |
| Number of Sequences | 105 |
| Average Sequence Length | 75 residues |
| Representative Sequence | MPSVDFARWTTTLTASYLAITAALIAILGNTVPGRTWLVAVHLTLSALLLILNRARPSAGILRVIRDWHPL |
| Number of Associated Samples | 90 |
| Number of Associated Scaffolds | 105 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 80.95 % |
| % of genes near scaffold ends (potentially truncated) | 99.05 % |
| % of genes from short scaffolds (< 2000 bps) | 94.29 % |
| Associated GOLD sequencing projects | 87 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.40 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (76.190 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (21.905 % of family members) |
| Environment Ontology (ENVO) | Unclassified (28.571 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (32.381 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 60.61% β-sheet: 0.00% Coil/Unstructured: 39.39% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.40 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 105 Family Scaffolds |
|---|---|---|
| PF04055 | Radical_SAM | 66.67 |
| PF00075 | RNase_H | 1.90 |
| PF04366 | Ysc84 | 0.95 |
| PF07978 | NIPSNAP | 0.95 |
| PF13360 | PQQ_2 | 0.95 |
| PF00111 | Fer2 | 0.95 |
| PF13424 | TPR_12 | 0.95 |
| PF00069 | Pkinase | 0.95 |
| PF12704 | MacB_PCD | 0.95 |
| COG ID | Name | Functional Category | % Frequency in 105 Family Scaffolds |
|---|---|---|---|
| COG0515 | Serine/threonine protein kinase | Signal transduction mechanisms [T] | 3.81 |
| COG2930 | Lipid-binding SYLF domain, Ysc84/FYVE family | Lipid transport and metabolism [I] | 0.95 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 76.19 % |
| All Organisms | root | All Organisms | 23.81 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 21.90% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 21.90% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 11.43% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 6.67% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 4.76% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 3.81% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 3.81% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 2.86% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.90% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.90% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.90% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 1.90% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 1.90% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.90% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.95% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.95% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.95% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.95% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.95% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.95% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.95% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.95% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.95% |
| Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 0.95% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.95% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.95% |
| Visualization |
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
| 3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
| 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
| 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
| 3300006178 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Host-Associated | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
| 3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
| 3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
| 3300006894 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control | Environmental | Open in IMG/M |
| 3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
| 3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009610 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 | Environmental | Open in IMG/M |
| 3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
| 3300011403 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2 | Environmental | Open in IMG/M |
| 3300011432 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2 | Environmental | Open in IMG/M |
| 3300011445 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2 | Environmental | Open in IMG/M |
| 3300012163 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT800_2 | Environmental | Open in IMG/M |
| 3300012166 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2 | Environmental | Open in IMG/M |
| 3300012228 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2 | Environmental | Open in IMG/M |
| 3300012891 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2 | Environmental | Open in IMG/M |
| 3300012897 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1 | Environmental | Open in IMG/M |
| 3300012899 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2 | Environmental | Open in IMG/M |
| 3300012900 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1 | Environmental | Open in IMG/M |
| 3300012901 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1 | Environmental | Open in IMG/M |
| 3300012902 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1 | Environmental | Open in IMG/M |
| 3300012903 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1 | Environmental | Open in IMG/M |
| 3300012905 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2 | Environmental | Open in IMG/M |
| 3300012908 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1 | Environmental | Open in IMG/M |
| 3300012912 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2 | Environmental | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014861 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT27_16_10D | Environmental | Open in IMG/M |
| 3300014864 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D | Environmental | Open in IMG/M |
| 3300014875 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D | Environmental | Open in IMG/M |
| 3300015201 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2) | Environmental | Open in IMG/M |
| 3300015257 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_10D | Environmental | Open in IMG/M |
| 3300015258 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
| 3300018429 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T | Environmental | Open in IMG/M |
| 3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
| 3300021082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo | Environmental | Open in IMG/M |
| 3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
| 3300022901 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4 | Environmental | Open in IMG/M |
| 3300023066 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6 | Environmental | Open in IMG/M |
| 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
| 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027886 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes) | Environmental | Open in IMG/M |
| 3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028587 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3 | Environmental | Open in IMG/M |
| 3300028592 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30 | Environmental | Open in IMG/M |
| 3300028803 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120 | Environmental | Open in IMG/M |
| 3300028809 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48 | Environmental | Open in IMG/M |
| 3300031198 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S | Environmental | Open in IMG/M |
| 3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
| 3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
| 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Host-Associated | Open in IMG/M |
| 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Host-Associated | Open in IMG/M |
| 3300031913 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4 | Environmental | Open in IMG/M |
| 3300031938 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1 | Environmental | Open in IMG/M |
| 3300031940 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2 | Environmental | Open in IMG/M |
| 3300031944 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1 | Environmental | Open in IMG/M |
| 3300032000 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3 | Environmental | Open in IMG/M |
| 3300032012 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3 | Environmental | Open in IMG/M |
| 3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
| 3300032122 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4 | Environmental | Open in IMG/M |
| 3300032211 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1 | Environmental | Open in IMG/M |
| 3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
| 3300034149 | Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI1027J12803_1002116192 | 3300000955 | Soil | MRPVDFARWTTTLTVSYLAITAALIAILGSTIPGRAWLVAVHLTLSGLLLILNRGRPSGIRRVILDWHPLMLFPLLYKEVEV |
| Ga0063356_1057513431 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MSSIDFARWTTTLTASYLAITAALIAILGTTVPGRVWLVAVHLTLAGSLLILNRARRPAGILRVV |
| Ga0063356_1064688581 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MPPVDFARRTTTLTASYLAITAALIAIFGNGVPGRYWLVAAHVTCSASLLILDRARPRGILLVVRDWH |
| Ga0062595_1007440912 | 3300004479 | Soil | MPSVDFARPTTRVMASYLLITAALAASFGGSVRGRGWLTALHLVVAGSLLILDRARPPSGILRVIRDWHPL |
| Ga0062592_1003676162 | 3300004480 | Soil | MLEECQMPSVDFPRWTTTLTVSYLATTAALMAFLGTTVPGRVWLVSAHLTLSASLLILNGARPSAGILRVIRDWHPLVLFPFLYKEVELLA |
| Ga0062591_1014498822 | 3300004643 | Soil | MPPGDPARWTTRLTASYLAITAALIAILGDGVPGRGWLVTVHLTLSASLLMLIRANPPVGGLRVIRDWHPLMLFPLLYK |
| Ga0062591_1021516611 | 3300004643 | Soil | MGSVDCARWTTTLMASYLAITAALMAIPGTAVPGRAWLIAVHLSLSGSLLLLNRARPAAGILRVVRDWHPLALFPLLYKE |
| Ga0070676_113708361 | 3300005328 | Miscanthus Rhizosphere | MPVDFARWTTTLTASYLAITAALIAVLGSTIPGRAWLVAVHLTLAVSLLLLNRARPPAGILRVVRDWHPLMLFPLLYKEVERLAP |
| Ga0070677_100452711 | 3300005333 | Miscanthus Rhizosphere | MPPVDFARRTTTLTASYLAITAALIAIFGNGVPGRYGLVVAHVTGGASLLILDRARPKGILLVVRDWHPLMLF |
| Ga0070677_101747742 | 3300005333 | Miscanthus Rhizosphere | MPAVDFARWTTMLTTSYLAITAALIAIFGGAVPGRAWLVTAHLAVSGSLLILDRAKPRAEILRVV |
| Ga0070669_1017211342 | 3300005353 | Switchgrass Rhizosphere | MPPVDFARWTTTLTASYLAITAVLIAILGNAVPGRMWLVAVHLTLAGSLLILDRARPRGILLVVRDWHPLMLFPLLYKEV |
| Ga0070675_1006119561 | 3300005354 | Miscanthus Rhizosphere | MPPVDFARWTTTLTASYLAITAVLIAILGNAVPGRIWLVAVHLTLAGSLLILDRARPRGILLVVRDWHPL |
| Ga0070705_1008735301 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | MPSVDFARWTTTLTASYLAITAALIAILGTTVPGHARLVSVHLALSGALLILNRARPSSGILRVIRDWHPLVL |
| Ga0070678_1011444281 | 3300005456 | Miscanthus Rhizosphere | MPPVDFARRTTTLTASYLAITAALVAVVGNAVPGRAWLVAGHLTLVGALLILNRASPSA |
| Ga0070685_109038141 | 3300005466 | Switchgrass Rhizosphere | MPSVDFARPTTKVTASYLLITAALAASFGSTVRGRGWLIALHVVVAGSLLILDRARPPSGILRVIRD |
| Ga0068861_1010636501 | 3300005719 | Switchgrass Rhizosphere | MPSVDFARPTTRVMASYLLITAALAASFGGSVRGRGWLIALHLVVAGSLLILDRARPPSGILRVIRDWHPLILFPF |
| Ga0068862_1023662551 | 3300005844 | Switchgrass Rhizosphere | MSSVDFARWTTTLTASYLAITAALIAIFGSTMPERFWLIAVHLTLSGSLLILNRARPSAGILRVIRDW |
| Ga0075367_104989391 | 3300006178 | Populus Endosphere | MPPVDCARWTTILMASYLALTATLITTLGHSVPGRAGLVVLHLTLAASLLILDGARPSSGILRVIRDWHPLLLFPFLYKEV |
| Ga0075428_1010278691 | 3300006844 | Populus Rhizosphere | MPPLDSARRTTTLTASYLAITAALIAILGKAVPGRIWLVAVHLTLFAALLLLNRANPSTGILRVIRDWHPLMLFP |
| Ga0075421_1017830201 | 3300006845 | Populus Rhizosphere | MPVDFARWTTTLTASYLAVTAALIAILGTTVPGRAWLVAVHLALSGSLLILNRARPPAGILRVIRDWHPLMLFPLL |
| Ga0075431_1002420823 | 3300006847 | Populus Rhizosphere | MRPVDCARWTTTLTASYLAITAALIAILGHAVPGRAWLVAVHLLLSGLLLIANRARPSAGIVRVILDW |
| Ga0075420_1001993611 | 3300006853 | Populus Rhizosphere | MPPVDSARWTTRLTASYLAITGALIAMLGHGVPGRVWLVAVHLALSASLLTLNRARQSGGVLRAVHDWHPLMLFPLLY |
| Ga0079215_104384742 | 3300006894 | Agricultural Soil | MPPVDFARWTTTLTASYLAITAALIAIFGNGVPGRYWLVAAHVTCSASLLMLDRARPRRILLV |
| Ga0075419_100455552 | 3300006969 | Populus Rhizosphere | MPPVDVARWTTTLTASYLAITAALVVILGNTVPGRVWLVAVHVTLSGSLLILNRARPSAGILRVIRDWHPLMLFPLLYKEVEV |
| Ga0079218_103340581 | 3300007004 | Agricultural Soil | MPPVDFARWTTTLTASYLAITAALIAIFGNGVPGRYWLVAAHVTCSASLLMLDRARPRRILLVVRDWHPLMLFPLLYKEVELL |
| Ga0111539_117344151 | 3300009094 | Populus Rhizosphere | MPPVDFARKTTTLTASYLATTAALIAILGNGVPARYWLIAAHVTCAASLLILDRSRPRAILRVVRDWHPLMLFP |
| Ga0105340_12203192 | 3300009610 | Soil | VPSVDFARWTTTLTASYLAITAALIAIFGSTLPERFWLIAVHLTLSGSLLILNRARPSAGILRVIRDWHPLAL |
| Ga0134123_112706492 | 3300010403 | Terrestrial Soil | MPVDFARWTTTLTASYLAITAALVAILGTAVPGRVWLVAVHLTLSGSLLILNRARPPAGIPRVILDWH |
| Ga0134123_123513221 | 3300010403 | Terrestrial Soil | MSSVDFARWTTTLTASYLAITAALIAIRGATVPGRIWLVAVHLTLSGSLLILNRSRRSAGILRVVCDWHPLMLFPLL |
| Ga0137313_10969651 | 3300011403 | Soil | MPPVDCSRWTTTLTASYLAITAALVAILGTSVPGRVWLIAVHLTLSGALLSLNRARPSAGLLRVINDWHPLMLFPFLYKEVE |
| Ga0137428_11370961 | 3300011432 | Soil | MSSVDFARWTTTLTASYLAITAALIAILGHTVPGRMWLVAAHLTLSGLLLILNRARPPAGILRVI |
| Ga0137427_102255981 | 3300011445 | Soil | MPPVDTARWTTTLTASYLAITAALIAILGTTVPGRVWLVAVHLTLAGALLILNRARRPAG |
| Ga0137355_10599271 | 3300012163 | Soil | MPIVDFARWTTTLTVSYLAITAALMVFGNTVPGRVWLVAVHLTLSAALLSLNRASPPAGILRVIRDWHPLMLFPL |
| Ga0137350_11028061 | 3300012166 | Soil | MPPVDVARWTTTLTASYLAITAALIAILGTGVPGRVWLVAVHLTLSGSLLILNRARRPAGILRVV |
| Ga0137459_11740381 | 3300012228 | Soil | MPSVDFARWTTTLTASYLAITAALIAILGNTVPGRTWLVAVHLTLSALLLILNRARPSAGILRVIRDWHPL |
| Ga0157305_102192991 | 3300012891 | Soil | MSIVRVVDCARWTTTLTASYLAITAALMAILGDGVPGRGWLIAAHLTLGGSLVILNRARPPAAILRVIRDWHPLMLFPLLYKEVE |
| Ga0157285_101172471 | 3300012897 | Soil | LIAILGDGVPGRGWLVAVHLTLAASLLILNRANPPVGVRRVIRDWHPLMLFPLLYKEVELLAAVI |
| Ga0157299_100891602 | 3300012899 | Soil | MSIVRVVDCARWTTTLTASYLAMTAALIAILGTTVPGRVWLVAVHLTLSGLLLILNYARPPAG |
| Ga0157292_101892932 | 3300012900 | Soil | MPAVDFPRWTTTLTASYLAITAALIAIFGTAVPGRGWLMAMHLALSASLLILNRTRPSAGILRVIRDWHPL |
| Ga0157288_100315762 | 3300012901 | Soil | MPPVDCARWTTTLTASYLAITAALIAIRGTAVPGRVWLVAAHLTVAGSLLILNRARPPAGILRVIRDWHPLALFPLLYKEVELLAPA |
| Ga0157291_102872811 | 3300012902 | Soil | MPPGDPARWTTRLTASYLAITAALIAILGDGVPGRGWLVAVHLTLSASLLILNRANPPVGALRVIRDWHPLMLF |
| Ga0157289_102817761 | 3300012903 | Soil | MPPVDFARWTTTLTASYLAITAALIAILGNGVPGRYWLVVAHVTCAASLLILDRSRPRGILRVVHDWHPLMLFPLLYKEV |
| Ga0157296_102582601 | 3300012905 | Soil | MPPVDFARWTTTLTASYLAITAALIAILGNGVPRRCWLVVAHVTCAASLLILDRSRPRGILRVVRDWHPLMLFP |
| Ga0157286_102403472 | 3300012908 | Soil | MPPVDVARWTTTLTASYLAITGALIVTFGDALPDREWLVAAHLILSASLLLLNRARPSTGLLCVIRDWHPL |
| Ga0157306_100481331 | 3300012912 | Soil | MSIVRVVDCARWTTTLTASYLAITAALMAILRNGVPGRGWLIAVHLTLSVSLLILNRARPPAGILCVIRDWHPLV |
| Ga0157306_100628761 | 3300012912 | Soil | MPPVDCARWTTRLTASYLAITAGLIAVLGNSVPGRIWLVALHLTLSASLLILNRAKPPAGILPVIRDWHPL |
| Ga0164300_102513322 | 3300012951 | Soil | MPPVDCARWTTRLTASYLAIAAGLIAILGNAVPGRVWLVAVHLTLSGSLLILNRARPAGILGVVRDWHPLMLFPLLYK |
| Ga0164299_112738512 | 3300012958 | Soil | MPPVDFARWTTTLTASYLAITAALIATVGNAVPGRAWLVAGHLTLAGALLILNRASPSAGILRVIRDWHPLMLFPLLY |
| Ga0164306_110561222 | 3300012988 | Soil | MPPVDFARRTTTLTASYLAITAALVAVVGNAVPGRAWLVAGHLTLAGALLILNRASPSAGIVSVIRDWHPLMLFPLLYKEVE |
| Ga0163163_104701792 | 3300014325 | Switchgrass Rhizosphere | MPPVDFARWTTTLTASYLAITGALIAILGTGIAGRGWLAATHLMLSASLLILNRANPSAGLLRVIRDWHPLLLFPLLYKEVELLAPVI |
| Ga0157380_119290522 | 3300014326 | Switchgrass Rhizosphere | MIRQMPSVDFARWTTTLTASYLATTAALVAILGTTVPGRVWLVAAHLTLSGLLLILNRARPSGI |
| Ga0180061_10454261 | 3300014861 | Soil | MPSVDFARWTTTLTASYLAITAALIAILGNGVPGRYWLVAAHVTCSASLLMLDRARPRGILLVVRDWHPLMLLPLLYKE |
| Ga0180068_10557131 | 3300014864 | Soil | MPSVDFARWTTTLTASYLAITAALIAILGNTVPGRAWLVAVHVTLAGSLLMLNRARPSAGILRVIRDWHPLMLF |
| Ga0180083_10331781 | 3300014875 | Soil | MPPVDVARWTTTLTAAYLAITAALMVFGNTVPGRVWLVAVHLTLSAALLSLNRASPPAGILR |
| Ga0173478_105039091 | 3300015201 | Soil | MPPGDPARWTTRLTASYLAITAALIAILGDDVPGRGWLVAVHLTLSASLLMLIRANPPVGVLRVIRDWHPLMLFPLLYKEVELLAAVIG |
| Ga0180067_11343152 | 3300015257 | Soil | MPPVDCSRWTTTLTASYLAITAALVAILGTSVPGRVWLIAVHLTLSGALLSLNRARPSA |
| Ga0180093_11741832 | 3300015258 | Soil | MPPVDCARWTTTLTASYLAITAALIAILGNTVPGRAWLVAVHLALSGLLLILNRARPPAGILRVILDWHPLMLF |
| Ga0132258_130003491 | 3300015371 | Arabidopsis Rhizosphere | MPPVDFARWTTTLTASYLAITAALIATVGNAVPGRAWLVAVHLTLVGSLLILNRASPSAGILRVIRDWHPLML |
| Ga0132255_1043308032 | 3300015374 | Arabidopsis Rhizosphere | LLAIAGNAVPGRFWLVSVHVTLSASLLILNRANPSAGILRVIRDWHPLMLFPFLYKEVELLA |
| Ga0184625_102231811 | 3300018081 | Groundwater Sediment | MPPVDFARWTTTLTASYLAITAALIAILGNGVPRRYWLVVAHVTCAASLLILDRSRPRGILRVVRDWHPLMLFPLLYKEVELVAAVIGD |
| Ga0190272_101478712 | 3300018429 | Soil | MRAVDCARWTTTLTASYLAITAALIAILGNAVPGRIWLVAVHLTLSGLLLILDRARPSARIL |
| Ga0190268_119209992 | 3300018466 | Soil | MPPVDCARWTTTLTASYLAITAALVAILGNAVPGRVQLVAVHLLLAWSLLILNRARPSAGILRVIRDWHPLMLFPLL |
| Ga0190270_114782782 | 3300018469 | Soil | MPSVDLPRWTTTLTASYLAMTAALIAILATTVPGRFWLVAVHLTLSGSLLILNRARPSAGILRVIRDWHPLLLFPFLYKEVE |
| Ga0190270_125521181 | 3300018469 | Soil | LPARSIDCARWTTTLTASYLAITAGLIVILGKTVPGRIWLVAVHLTLSGLLLILNRARPSAGILRVIRDW |
| Ga0190270_131029161 | 3300018469 | Soil | MSSVDFARWTTTLTASYLAITAALIAILGNTVPGRAWLVAVHLTLAGSLLILNRARPSAGILRVV |
| Ga0173481_106407102 | 3300019356 | Soil | MPSVDFPRWTTTLTVSYLATTAALMAFLGTTVPGRVWLVSAHLTLSASLLILNGARPSAGILCVIRDWHPLVLFPFLYK |
| Ga0210380_102946461 | 3300021082 | Groundwater Sediment | MPSVDFARWTTTLTASYLALTGALITIFGQAVPARAGLVVLHLTLSAALLSLNRARPSQRILRVIRDWHPLMLFPFLYKEVELLAGS |
| Ga0222622_105296272 | 3300022756 | Groundwater Sediment | MLTASYLLITAALVAILGTTVRGRAWLVAVHLALAAALLILDRARPPAGILRVIADWHPLALFPFLYK |
| Ga0247788_10803771 | 3300022901 | Soil | MPSVDFPRWTTTLTVSYLATTAALMAFLGTTVPGRVWLVSAHLTLSASLLILNGARPSAGILRVIRDWHPLV |
| Ga0247793_10799641 | 3300023066 | Soil | MPSVDFPRWTTTQTVSYLATTAALMAFIGTTVPGRVWLVSAHLTLSASLLILNGARPSAGILRVIRDWHPLVLFPFLYKEVELLAP |
| Ga0207650_106772192 | 3300025925 | Switchgrass Rhizosphere | MPPVDFARWTTTLTASYLAITAALIAILGNGVPGRYWLVVAHVTCAASLLILDRSRPRGILRVVRDWHPLMLFPLLYKEVEL |
| Ga0207701_101473901 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | VPSVDFARWTTTLTASYLAITAALIAIFGTTVPERFWLIAVHLTLSGSLLILNRARPSAGILHVIRDWHPLLLF |
| Ga0207703_121676692 | 3300026035 | Switchgrass Rhizosphere | LRPRHIRIIAAMPPVDFARWTTTLTASYLAITAVLIAILGNAVPGRIWLVAVHLTLAGSLLILDRARPRGILLVVRDWHPLMLFPLLYKEVELL |
| Ga0207641_104471583 | 3300026088 | Switchgrass Rhizosphere | MPPVDFARRTTTLTASYLAITAALVAVVGNAVPGRAWLVAGHLTLVGALLILNRASPSAGIVSVIRDWHPLMLFPLLYKEVELLAAV |
| Ga0209486_101760472 | 3300027886 | Agricultural Soil | MPPVDFARWTTTLTASYLAITAALIAIFGNGVPGRYWLVAAHVTCSASLLMLDRARPRRILLVV |
| Ga0209382_102349812 | 3300027909 | Populus Rhizosphere | MPPVDVARWTTTLTASYLAITAALVAILGNTVPGRVWLVAVHVTLSGSLLILNRARPSAGILRVIRD |
| Ga0268264_120779442 | 3300028381 | Switchgrass Rhizosphere | MPPVDFARRTTTLTASYLAITAALIATVGNAVPGRAWLVAVHLTIVGALLILNRVSPSAGILRVVRDWHPLMLFPLLYKEV |
| Ga0247828_111925021 | 3300028587 | Soil | MSIVRVVDCARWTTTLTASYLAITAALMAILRNGVPGRGWLIAVHLTLSVSLLILNRARPPAGILCVIRDWHPLVLFPLLYKEV |
| Ga0247822_116393431 | 3300028592 | Soil | MPPVESARWTTILMASYLALTAGLLATLGQGVPGRASLVMLHLTLAASLLILDRARPSAGILRVIRDWHPLLLFPFLYKEVE |
| Ga0307281_104387681 | 3300028803 | Soil | MPSVDFARWTTTLTASYLALTAALIAILGTSVPGRFWLVAVHLALAGSLLSLDRARPPAGIRRVVRDWHPLMLFPPLYKE |
| Ga0247824_102468692 | 3300028809 | Soil | MPPVDCARWTTRLTASYLAIIAGLIAILGNTVPGRVWLVTVHLTLSGSLLILNRSRPPVGILGVVRDWHPLLLFPLLYKEVDPLAPA |
| Ga0307500_100313602 | 3300031198 | Soil | MPNVPPADLTRWTTTLTASYLAMTAALVAIFGNGVPGRYWLVAAHLTLSGLLLTLDRARPSAGILRVIRDWHPLVLFPLV |
| Ga0310887_100507821 | 3300031547 | Soil | MPPGDPARWTTKLTAAYLAITAALIAILGDGVPGRGWLVAVHLTLSAALLILNRANPPAGVLRVIHDWHPLML |
| Ga0310887_107385242 | 3300031547 | Soil | MPLVDVARWTTTLTASYLAMTAALVAILGTTVPGRVWLVAVHLTLSGSLLILNRARPSAGILRVIRDWHPLMLFP |
| Ga0310886_102241242 | 3300031562 | Soil | MLTAAYLAITAGLIAILGDGVPGRGWLVAVHLTLAASLLILNRANPPVGVLRVIRDWHPLMLFPLLYKEVELLAAV |
| Ga0310886_111535881 | 3300031562 | Soil | MRPVDFARRTTTLTASYLAITAALIAILGNTVPGRAWLVAVHLGLSASLLTLSRARAPAGILRMIRDWHPLILFPLLYKEVELLAPVI |
| Ga0307405_112986881 | 3300031731 | Rhizosphere | MSSVELARWTTTLTASYLAITAALIVFLGTTVPGRVWLVVVHLTLSASLLILNRATKPAGIL |
| Ga0307413_114315651 | 3300031824 | Rhizosphere | MAPADFARWTTSLTASYLAITAALMAVLGTAVPGRVWLIAAHLSLSGVLLILNRARPPAGIGRLVRDWHPLALF |
| Ga0310891_100409002 | 3300031913 | Soil | MLTAAYLAITAGLIAILGDGVPGRGWLVAVHLTLSAALLILNRANPPAGVLRVIHDWHPLMLFPL |
| Ga0310891_101003512 | 3300031913 | Soil | MPPVDFARWTTTLTASYMAITAALIAILGNGVPGRYWLVVAHVTCASSLLILDRSRPRGILRVVRDWHPLM |
| Ga0308175_1001895521 | 3300031938 | Soil | MPSVDFARWTTTLTASYLALTAALIAILGTSVPGRFWLVAVHLALAGSLLTLDRARPPEGILRVVR |
| Ga0310901_100924401 | 3300031940 | Soil | MLTAAYLAITAGLIAILGDGVPGRGWLVAVHLTLSAALLILNRANPPAGVLRVIHDWHPLMLFPLLYKEVEL |
| Ga0310884_107483271 | 3300031944 | Soil | MSIVRVVDCARWTTTLTASYLAITAALMAILRNGVPGRGWLIAAHLTLSVSLLILNRARPPAGILCVIRDWHPLVLFPLLYKEVELLAAVI |
| Ga0310884_108439461 | 3300031944 | Soil | MLTAAYLAITAGLIAILGDGVPGRGWLVAVHLTLSAALLILNRANPPVAVLRVIRDWHPLMLFPLLYKEVELLAAVIGDGRL |
| Ga0310903_100553283 | 3300032000 | Soil | MPPVDCARWTTRLTASYLAITAVLIAAVGNGVPGRIWLIVTHLTLSASLLILNRARPSAGILRVIRDWHPLILFPL |
| Ga0310903_104594901 | 3300032000 | Soil | MPPVDFARRTTTLTASYLAITAALIAIFGNGVPGRYWLVAAHVTCSASLLILDRARPRGILLVVRDWHPLMLFPLLYKEVE |
| Ga0310902_100495333 | 3300032012 | Soil | MPSVDFARWTTMLTASYLAITAALIASSGGAVPGRAWLVTAHLAVSGSLLILDRAKPRAEILRVVRDWHPLLLFPLLY |
| Ga0310902_100890131 | 3300032012 | Soil | MPPVDCARWTTRLTASYLAITAVLIAAVGNGVPGRIWLIVTHLTLSASLLILNRARPSAGILRVIRDWHPLI |
| Ga0310902_111431822 | 3300032012 | Soil | MPPVDCARWTTRLTASYLAIVAGLIAILGNAVPGRVWLVAVHLTLSGSLLILNRARPAGILGVVRDWHPLLLFPLLYKEVELL |
| Ga0310890_108986331 | 3300032075 | Soil | VPSVDFARWTTTLTASYLAITAALIAIFGSTVPERFWLIAVHLTLSGSLLILNRARPSAGILRVIRDWHPLLLFPFLYKEVELLAPVLG |
| Ga0310890_118681242 | 3300032075 | Soil | MPLVDVARWTTTLTASYLAITAALVAILGSSLPGRVWLVAAHLTLSGSLLILNRASPSAG |
| Ga0310895_103705211 | 3300032122 | Soil | MLTAAYLAITAGLIAILGDGVPGRGWLVAVHLTLSAALLILNRANPPAGVLRVIHDWHPLMLFPLLYKEVELLAAAI |
| Ga0310896_106971651 | 3300032211 | Soil | MPPVDFARRTTTLTASYLAITAALIAIFGNGVPGRYWLVAAHVTCSASLLILDRARPRGI |
| Ga0247829_115918541 | 3300033550 | Soil | MPPVDFARWTTTLTASYLAITAALIAILGNTVPGRVWLVAAHLTLSGALLILNRARPSAGILRVIRDWYPLM |
| Ga0364929_0326352_268_528 | 3300034149 | Sediment | MPPVYCARWTTTLTVSYLAITAALVAILGTTVPGRVWLVAVHLTLSGSLLILNRARPSAAIPRVILDWHPLMLFPLLYKEVELLAPV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |