Basic Information | |
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Family ID | F095736 |
Family Type | Metagenome |
Number of Sequences | 105 |
Average Sequence Length | 112 residues |
Representative Sequence | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDAAVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGITRDTCETVCRGRAW |
Number of Associated Samples | 81 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 80.95 % |
% of genes near scaffold ends (potentially truncated) | 46.67 % |
% of genes from short scaffolds (< 2000 bps) | 74.29 % |
Associated GOLD sequencing projects | 73 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.50 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (82.857 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (20.952 % of family members) |
Environment Ontology (ENVO) | Unclassified (37.143 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (49.524 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 12.50% β-sheet: 25.00% Coil/Unstructured: 62.50% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.50 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 105 Family Scaffolds |
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PF00719 | Pyrophosphatase | 25.71 |
PF00441 | Acyl-CoA_dh_1 | 10.48 |
PF00892 | EamA | 9.52 |
PF01799 | Fer2_2 | 8.57 |
PF00300 | His_Phos_1 | 3.81 |
PF02738 | MoCoBD_1 | 2.86 |
PF02770 | Acyl-CoA_dh_M | 1.90 |
PF00563 | EAL | 0.95 |
PF05036 | SPOR | 0.95 |
PF00210 | Ferritin | 0.95 |
PF13492 | GAF_3 | 0.95 |
PF07750 | GcrA | 0.95 |
PF13437 | HlyD_3 | 0.95 |
PF04226 | Transgly_assoc | 0.95 |
PF12276 | DUF3617 | 0.95 |
PF10098 | DUF2336 | 0.95 |
PF03401 | TctC | 0.95 |
COG ID | Name | Functional Category | % Frequency in 105 Family Scaffolds |
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COG0221 | Inorganic pyrophosphatase | Energy production and conversion [C] | 25.71 |
COG1960 | Acyl-CoA dehydrogenase related to the alkylation response protein AidB | Lipid transport and metabolism [I] | 12.38 |
COG2200 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) | Signal transduction mechanisms [T] | 0.95 |
COG2261 | Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family | General function prediction only [R] | 0.95 |
COG3181 | Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC | Energy production and conversion [C] | 0.95 |
COG3434 | c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains | Signal transduction mechanisms [T] | 0.95 |
COG4943 | Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains | Signal transduction mechanisms [T] | 0.95 |
COG5001 | Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain | Signal transduction mechanisms [T] | 0.95 |
COG5352 | Uncharacterized conserved protein | Function unknown [S] | 0.95 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 82.86 % |
Unclassified | root | N/A | 17.14 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2088090015|GPICI_8792550 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 3069 | Open in IMG/M |
2189573005|GZGK9D402GIST9 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 508 | Open in IMG/M |
3300000033|ICChiseqgaiiDRAFT_c0862356 | Not Available | 665 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_101649151 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2743 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_105369804 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 949 | Open in IMG/M |
3300000789|JGI1027J11758_12379225 | Not Available | 543 | Open in IMG/M |
3300003911|JGI25405J52794_10145778 | Not Available | 539 | Open in IMG/M |
3300004633|Ga0066395_10041268 | All Organisms → cellular organisms → Bacteria | 1992 | Open in IMG/M |
3300004633|Ga0066395_10223306 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 998 | Open in IMG/M |
3300005332|Ga0066388_100413960 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1992 | Open in IMG/M |
3300005332|Ga0066388_101318408 | Not Available | 1246 | Open in IMG/M |
3300005332|Ga0066388_103800586 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 770 | Open in IMG/M |
3300005332|Ga0066388_104040261 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 748 | Open in IMG/M |
3300005354|Ga0070675_101289558 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 673 | Open in IMG/M |
3300005367|Ga0070667_101422573 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 650 | Open in IMG/M |
3300005434|Ga0070709_11354413 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter fetus | 575 | Open in IMG/M |
3300005444|Ga0070694_100376869 | Not Available | 1105 | Open in IMG/M |
3300005526|Ga0073909_10266952 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 766 | Open in IMG/M |
3300005713|Ga0066905_100084944 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2094 | Open in IMG/M |
3300005713|Ga0066905_100583580 | Not Available | 943 | Open in IMG/M |
3300005713|Ga0066905_100585063 | Not Available | 942 | Open in IMG/M |
3300005764|Ga0066903_100134526 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 3490 | Open in IMG/M |
3300005764|Ga0066903_101791169 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1173 | Open in IMG/M |
3300005764|Ga0066903_102715809 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 960 | Open in IMG/M |
3300005937|Ga0081455_10008459 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 10699 | Open in IMG/M |
3300005937|Ga0081455_10063186 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 3108 | Open in IMG/M |
3300005937|Ga0081455_10086796 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2548 | Open in IMG/M |
3300005937|Ga0081455_10732671 | Not Available | 627 | Open in IMG/M |
3300006047|Ga0075024_100563905 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 607 | Open in IMG/M |
3300006049|Ga0075417_10154061 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1071 | Open in IMG/M |
3300006057|Ga0075026_100163677 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1149 | Open in IMG/M |
3300006194|Ga0075427_10000156 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 6530 | Open in IMG/M |
3300006237|Ga0097621_100100113 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 2438 | Open in IMG/M |
3300006844|Ga0075428_100536281 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1251 | Open in IMG/M |
3300006844|Ga0075428_100798147 | All Organisms → cellular organisms → Bacteria | 1003 | Open in IMG/M |
3300006845|Ga0075421_100290187 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1992 | Open in IMG/M |
3300006847|Ga0075431_100371326 | Not Available | 1435 | Open in IMG/M |
3300006854|Ga0075425_100097540 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 3338 | Open in IMG/M |
3300009094|Ga0111539_12974632 | All Organisms → cellular organisms → Bacteria | 548 | Open in IMG/M |
3300009147|Ga0114129_10463236 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1661 | Open in IMG/M |
3300009545|Ga0105237_12002422 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 588 | Open in IMG/M |
3300009792|Ga0126374_10267399 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1126 | Open in IMG/M |
3300010043|Ga0126380_11763929 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 558 | Open in IMG/M |
3300010046|Ga0126384_10650111 | All Organisms → cellular organisms → Bacteria | 929 | Open in IMG/M |
3300010047|Ga0126382_10001787 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 8961 | Open in IMG/M |
3300010358|Ga0126370_10072479 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2282 | Open in IMG/M |
3300010359|Ga0126376_10401088 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1236 | Open in IMG/M |
3300010360|Ga0126372_12304207 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 588 | Open in IMG/M |
3300010361|Ga0126378_10248608 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1871 | Open in IMG/M |
3300010361|Ga0126378_10287812 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1744 | Open in IMG/M |
3300010362|Ga0126377_10086074 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 2833 | Open in IMG/M |
3300010362|Ga0126377_10104441 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 2590 | Open in IMG/M |
3300010362|Ga0126377_10660387 | Not Available | 1095 | Open in IMG/M |
3300010362|Ga0126377_10769876 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 1019 | Open in IMG/M |
3300010362|Ga0126377_11338862 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 788 | Open in IMG/M |
3300010366|Ga0126379_10118100 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2402 | Open in IMG/M |
3300010376|Ga0126381_101868927 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 866 | Open in IMG/M |
3300010398|Ga0126383_10241602 | All Organisms → cellular organisms → Bacteria | 1765 | Open in IMG/M |
3300010398|Ga0126383_10250353 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1738 | Open in IMG/M |
3300010400|Ga0134122_10034050 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 3867 | Open in IMG/M |
3300010863|Ga0124850_1004238 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 4414 | Open in IMG/M |
3300010863|Ga0124850_1008679 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3219 | Open in IMG/M |
3300012948|Ga0126375_10650866 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 813 | Open in IMG/M |
3300012948|Ga0126375_11838643 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 530 | Open in IMG/M |
3300012948|Ga0126375_11871849 | Not Available | 526 | Open in IMG/M |
3300012958|Ga0164299_11705768 | All Organisms → cellular organisms → Bacteria | 500 | Open in IMG/M |
3300012971|Ga0126369_12855923 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 566 | Open in IMG/M |
3300012987|Ga0164307_10399413 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1012 | Open in IMG/M |
3300013296|Ga0157374_11113025 | Not Available | 810 | Open in IMG/M |
3300013306|Ga0163162_12256409 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 625 | Open in IMG/M |
3300013306|Ga0163162_13467794 | All Organisms → cellular organisms → Bacteria | 502 | Open in IMG/M |
3300015374|Ga0132255_102210843 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 839 | Open in IMG/M |
3300015374|Ga0132255_105221061 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 550 | Open in IMG/M |
3300016357|Ga0182032_10000385 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 17455 | Open in IMG/M |
3300017947|Ga0187785_10012006 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2961 | Open in IMG/M |
3300018081|Ga0184625_10040302 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2318 | Open in IMG/M |
3300021082|Ga0210380_10426570 | Not Available | 607 | Open in IMG/M |
3300025961|Ga0207712_11076250 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 715 | Open in IMG/M |
3300025972|Ga0207668_10183372 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1653 | Open in IMG/M |
3300027288|Ga0208525_1001950 | All Organisms → cellular organisms → Bacteria | 2047 | Open in IMG/M |
3300027310|Ga0207983_1008844 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512 | 1134 | Open in IMG/M |
3300027873|Ga0209814_10193861 | Not Available | 877 | Open in IMG/M |
3300027909|Ga0209382_10002006 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 30565 | Open in IMG/M |
3300027915|Ga0209069_10173360 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1086 | Open in IMG/M |
3300028791|Ga0307290_10226629 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 685 | Open in IMG/M |
3300028819|Ga0307296_10607829 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 598 | Open in IMG/M |
3300031231|Ga0170824_107868418 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 874 | Open in IMG/M |
3300031543|Ga0318516_10033284 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2732 | Open in IMG/M |
3300031544|Ga0318534_10082469 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1829 | Open in IMG/M |
3300031682|Ga0318560_10540338 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 631 | Open in IMG/M |
3300031720|Ga0307469_11599841 | Not Available | 626 | Open in IMG/M |
3300031736|Ga0318501_10204512 | Not Available | 1034 | Open in IMG/M |
3300031751|Ga0318494_10629017 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 628 | Open in IMG/M |
3300031763|Ga0318537_10301457 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 593 | Open in IMG/M |
3300031796|Ga0318576_10025787 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 2387 | Open in IMG/M |
3300031821|Ga0318567_10904008 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 500 | Open in IMG/M |
3300031831|Ga0318564_10496532 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 530 | Open in IMG/M |
3300031846|Ga0318512_10196809 | Not Available | 985 | Open in IMG/M |
3300031880|Ga0318544_10203592 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 764 | Open in IMG/M |
3300031908|Ga0310900_11355788 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 596 | Open in IMG/M |
3300031945|Ga0310913_10000149 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 28137 | Open in IMG/M |
3300032041|Ga0318549_10146311 | Not Available | 1050 | Open in IMG/M |
3300032180|Ga0307471_102063856 | All Organisms → cellular organisms → Bacteria | 716 | Open in IMG/M |
3300032205|Ga0307472_100498326 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1049 | Open in IMG/M |
3300033290|Ga0318519_10011992 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 3597 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 20.95% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 13.33% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 13.33% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 10.48% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 4.76% |
Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 4.76% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.81% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 2.86% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.86% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.90% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.90% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.90% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.90% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.90% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.95% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.95% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.95% |
Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil | 0.95% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.95% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.95% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.95% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.95% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.95% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.95% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.95% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.95% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.95% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.95% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2088090015 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
2189573005 | Grass soil microbial communities from Rothamsted Park, UK - FG3 (Nitrogen) | Environmental | Open in IMG/M |
3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000789 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300003911 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
3300006047 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 | Environmental | Open in IMG/M |
3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
3300006057 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012 | Environmental | Open in IMG/M |
3300006194 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 | Host-Associated | Open in IMG/M |
3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300010863 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction) | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300016357 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 | Environmental | Open in IMG/M |
3300017947 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG | Environmental | Open in IMG/M |
3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
3300021082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo | Environmental | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300027288 | Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes) | Environmental | Open in IMG/M |
3300027310 | Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes) | Environmental | Open in IMG/M |
3300027873 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300027915 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes) | Environmental | Open in IMG/M |
3300028791 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144 | Environmental | Open in IMG/M |
3300028819 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153 | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031543 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20 | Environmental | Open in IMG/M |
3300031544 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26 | Environmental | Open in IMG/M |
3300031682 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031736 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21 | Environmental | Open in IMG/M |
3300031751 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24 | Environmental | Open in IMG/M |
3300031763 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29 | Environmental | Open in IMG/M |
3300031796 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24 | Environmental | Open in IMG/M |
3300031821 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20 | Environmental | Open in IMG/M |
3300031831 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20 | Environmental | Open in IMG/M |
3300031846 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19 | Environmental | Open in IMG/M |
3300031880 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25 | Environmental | Open in IMG/M |
3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
3300031945 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082 | Environmental | Open in IMG/M |
3300032041 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300033290 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
GPICI_02994720 | 2088090015 | Soil | MTFRLASVTCLTLLLCQPTFADEAGYARHRHRHHLPPSPHVVELVAPPYSGQFVINGFRYDGVTPACLHWVPGQPVRLVSGSWFGDCNSATFYNVSTRNACQTLCRGRAWW |
FG3_09257030 | 2189573005 | Grass Soil | GSFGEASDDPEFFWNWASKTPVFATSPMLPTGPVQVKLRRRAAIYAMGFKMITRAGSVISALLVCQPAFADEPAYTRHRHRHYLPPTRHVVELVAPPFSGQFVINGFRYDGVAPACYRWVPGQPVRLISGSWFGDCASATFYNVSTRDTCQTVCRGRAGWW |
ICChiseqgaiiDRAFT_08623561 | 3300000033 | Soil | MTVRVASVICFALLLCQSAFADEPGYTRHRHRYYSAAPHVVELVAPPFSGRFVINGXRXDGXAPACLRWVPDQPVRLISGSWFGDCDSATFYNVSTRTTCQTLCXGRAXW* |
INPhiseqgaiiFebDRAFT_1016491514 | 3300000364 | Soil | MTVRVASVICFALLLCQSAFADEPGYTRHRHRYYSAAPHVVELVAPPFSGRFVINGYRYDGVAPACLRWVPDQPVRLISGSWFGDCDSATFYNVSTRTTCQTLCGGRAWW* |
INPhiseqgaiiFebDRAFT_1053698042 | 3300000364 | Soil | MIPRVASITFALLLIWQPAFSDEPGNVRHRHRHAAIYPHVVELVAPPFSGQFVINGYRYDGVAPACRSWVPGQPVRLVSGSWYGDCASATFYNSATRTTCETVCRGSASWWW* |
JGI1027J11758_123792251 | 3300000789 | Soil | MTFRLASVTCLTLLLCQPTFADEAGYARHRHRHHLPPSPHVVELVAPPYSGQFVINGFRYDGVTPACLHWVPGQPVRLVSGSWFGDCNSATFYNVSTRNACQTLFEAARGGERRPYRIEKFSDLN* |
JGI25405J52794_101457781 | 3300003911 | Tabebuia Heterophylla Rhizosphere | MIVRVASVTCVALLLCQSAFADEPGSTRHRHRYYSAAPHVVELVAPPYSGRLVINGFRYDGVAPACLRWVPGQPVRLISGSWFGDCDSATFX |
Ga0066395_100412683 | 3300004633 | Tropical Forest Soil | MIARVASITFTLLLFSQSAFSDEPGYTQHRHRHAVVYPHVVELVAPPFSGQFVINGYRYDGIAPACFGWVPGQPVRLVSGSWYGDCASATFYNGATRNACETVCRGSASWWW* |
Ga0066395_102233062 | 3300004633 | Tropical Forest Soil | MIARVASITIALLLLGQSAFSDEPGYSRHRYRDAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETVCRGRAWRGW* |
Ga0066388_1004139602 | 3300005332 | Tropical Forest Soil | MIARVASITFALLLFSQSAFSDESGYTRHRHRHAAIYPHVVELVAPPFSGQFVINGYRYDGVAPACRGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETVCRGSASWWW* |
Ga0066388_1013184081 | 3300005332 | Tropical Forest Soil | EPFIRRLKMIARVASITFALLLFCQSAFSDEPGYTRHRHRHVSVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGATRNTCETVCRGRASWW* |
Ga0066388_1038005861 | 3300005332 | Tropical Forest Soil | MIARVASITFALLLFSQSAFSDEPGYMRHRHRHVAIYPHVVELVAPPFSGQFVINGYRYVGVAPACRGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETVCRGSVSWWW* |
Ga0066388_1040402613 | 3300005332 | Tropical Forest Soil | MIARLALVTCLALLLCQQAFSDEAGYTRHRHRHYLRGHHVVELVAPPFSGRFVINGFHYDGVAPACLGWVPGQRVRLVSGSWFGDCGSATFYNLSQHNTCPTQCGGRAWR* |
Ga0070675_1012895581 | 3300005354 | Miscanthus Rhizosphere | MIARVASITFALLLICQPAFSDEPGNVRHRHRHTAIYPHVVELVAPPFSGQFVINGYRYDGVAPACRGWVPGQPVRLVSGSWYGDCAGATFYNGATRNTCETVCRGSASWWW* |
Ga0070667_1014225732 | 3300005367 | Switchgrass Rhizosphere | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDAAVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGITRDTCETVCRGRAW |
Ga0070709_113544131 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MIPRVASITFALLLISQPAFSDEPGNVRHRHRHTAIYPHVVELVAPPFSGQFVINGYRYDGVAPACRGWVPGQPVRLVSGSWYGDCAGATFYNGATRNTCETVCRGSASWWW |
Ga0070694_1003768691 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDAAVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGI |
Ga0073909_102669522 | 3300005526 | Surface Soil | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDGAVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGITRDT |
Ga0066905_1000849442 | 3300005713 | Tropical Forest Soil | MIVRAASVTCFALLLCQSAFADEPGYTRHRHRYYSAAPHVVELVAPPYSGRFVINGFRYDGVAPACLRWVPGQPVRLISGSWFGDCDSATFYNVSTRTTCQTSCRGRAWW* |
Ga0066905_1005835802 | 3300005713 | Tropical Forest Soil | MIVRVASVTCLSMLLCHPAFADEPGYTRHRHRYYSAAPHVVELVAPPYSGRFVINGFRYDGVAPACLRWVPGQPVRLVSGSWFGDCDSATFYNVSTRTTCQ |
Ga0066905_1005850632 | 3300005713 | Tropical Forest Soil | MIVRVASMICLALLLCQPVFADEPSYSRHRHRHYLVAPHLVELVTPPFSGRFVINGFRYDGVAPACLRWFPGQPVRLVSGSWFGDCDSATFYNVSTRTTCQTLCRGRAWR* |
Ga0066903_1001345263 | 3300005764 | Tropical Forest Soil | MIARLALVTCLVLLLCQQAFSDEAGYTRHRHRHYLRGHHVVELVAPPFSGRFVINGFHYDGVAPACLGWVPGQPVRLVSGSWFGDCGSATFYNVSQHDTCPTQCGGRAWR* |
Ga0066903_1017911692 | 3300005764 | Tropical Forest Soil | MIARVASITFALLLFSQSAFSDEPGYTRHRHRDAAIYPHVVELVAPPFSGLLVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCANATFYNGVTRNTCETVCRGRAWLGW* |
Ga0066903_1027158092 | 3300005764 | Tropical Forest Soil | MIARVASITFALLLFSQSAFSDEPGYTRHRHRHVAIYPHVVELVAPPFSGQFIINGYRYVGVAPACRGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETVCRGSVSWWW* |
Ga0081455_1000845912 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MIVRVASVTCVALLLCQSAFADEPGSTRHRHRYYSAAPHVVELVAPPYSGRLVINGFRYDGVAPACLRWVPGQPVRLISGSWFGDCDSATFYNVSTRTTCQTSCRGRAWW* |
Ga0081455_100631862 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MIVRVASVTCFALLLCQPAFADEPSYTRHRHRSYSAAPHVVELVAPPFSGRFVINGFRYDGVAPACLRWVPGQPVRLVSGSWFGDCDSATFYNVSTRTACQTLCRGRAWW* |
Ga0081455_100867963 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MIVRVASVICVALLLCQSAFADEPAFKRHRHRHYLSAAPHVVELVAPPYSGRFVINGFRYDGVAPACLNWVPGQPVRLVSGSWFGDCDSATFYNASTRTTCQTLCRGRAWW* |
Ga0081455_107326713 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MIVRVASVTCFGLLLCQSAFADEPGYTRHRHRYYSAAPHVVELVAPPYSGQFVINGFRYDGIAPACLRWVPGQPVRLISGSWFGDCDSATFYNVSTRTTCQTSCRGRAWW* |
Ga0075024_1005639051 | 3300006047 | Watersheds | LRTAGDSVKLRNRAELFIRRLKMIARVASIAFVLMLCQPAFSDEPGNMRHRHRHFAVYPHVVELVAPPFSGQFVINGFRYDGVTSACLGWVPGQPVRLVSGSWYGDCANATFYNSSTRNTCETVCRGRAWGW* |
Ga0075417_101540611 | 3300006049 | Populus Rhizosphere | PSGYARMDILRERVNVLSFISLIHRRIKMIVRVASVSCLALLLCQPAFGDESTYTRHRHRHYLAAPHVVELVAPPYSGRFVINGFRYDGVAPACLRWVPGQPVRLVSGSWFGDCDSATFYNVSTRTACQTLCRGRAWR* |
Ga0075026_1001636772 | 3300006057 | Watersheds | LRTAGDSVKLRNRAELFIRRLKMIARVASIAFVLMLCQPAFSDEPGNMRHRHRHFVVYPHVVELVAPPFSGQFVINGFRYDGVTPACLGWVPGQPVRLVSGSWYGDCANATFYNSSTRNTCETVCRGRAWGW* |
Ga0075427_100001569 | 3300006194 | Populus Rhizosphere | MTFRLASVTCLTLLLCQPTFADEAGYARHRHRHHLPPSPHVVELVAPPYSGQFVINGFRYDGVTPACLHWVPGQPVRLVSGSWFGDCNSATFYNVSTRNACQTLCRGRAWW* |
Ga0097621_1001001131 | 3300006237 | Miscanthus Rhizosphere | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDAAVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGITRDTC |
Ga0075428_1005362811 | 3300006844 | Populus Rhizosphere | MDILRERVNVLSFISLIHRRIKMIVRVASVSCLALLLCQPAFGDESTYTRHRHRHYLAAPHVVELVAPPYSGRFVINGFRYDGVAPACLRWVPGQPVRLVSGSWFGDCDSATFYNVSTRTACQTLCRGRAWR* |
Ga0075428_1007981472 | 3300006844 | Populus Rhizosphere | MTFRLASVTCLTLLLCQPTFADEAGYARHRHRHHLPPSPHVVELVAPPYSGQFVINGFRYDGVTPACLHWVPGQPVRLVSGSWFGDCNSATFYNVSTRNACQTLCR |
Ga0075421_1002901873 | 3300006845 | Populus Rhizosphere | MIVRVASVSCLALLLCQPAFGDESTYTRHRHRHYLAAPHVVELVAPPYSGRFVINGFRYDGVAPACLRWVPGQPVRLVSGSWFGDCDSATFYNVSTRTACQTLCRGRAWR* |
Ga0075431_1003713264 | 3300006847 | Populus Rhizosphere | MFGRSLRSMGAGASSLASPSGYARMDILRERVNVLSFISLIHRRIKMIVRVASVSCLALLLCQPAFGDESTYTRHRHRHYLAAPHVVELVAPPYSGRFVINGFRYDGVAPACLRWVPGQPVRLVSGSWFGDCDSATFYNVSTRTACQTLCRGRAWR* |
Ga0075425_1000975403 | 3300006854 | Populus Rhizosphere | MIPRVASITFALLLISQPAFSDEPGNVRHRHRHAAIYPHVVELVAPPFSAQFVINGYRYDGVAPACRSWVPGQPVRLVSGSWYGDCASATFYNSATRTTCETVCRGSASWWW* |
Ga0111539_129746321 | 3300009094 | Populus Rhizosphere | EPFIRRLKMIPRVASITFALLLISQPAFSDEPGNVRHRHRHAAIYPHVVELVAPPFSAQFVINGYRYDGVAPACRSWVPGQPVRLVSGSWYGDCASATFYNSATRTTCETVCRGSASWWW |
Ga0114129_104632365 | 3300009147 | Populus Rhizosphere | MAVRVASVICFALLLCQSAFADEPGYTRHRHRYFSAAPHVVELVAPPFSGRFVINGFRYDGVAPACLRWVPDQPVRLISGSWIADCDSATFYNVPTRTTRQTLCRGRAWW* |
Ga0105237_120024221 | 3300009545 | Corn Rhizosphere | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDGAVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGITRDTCETVCRG |
Ga0126374_102673991 | 3300009792 | Tropical Forest Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETVCRGRAWRGW* |
Ga0126380_117639291 | 3300010043 | Tropical Forest Soil | FADEPGYTRHRHRYYSAAPHVVELVAPPYTGRFVINGFRYDGVAPACLRWVPGQPVRLVSGNWFGDCDSATFYNVSTRTTCQTLCRGRAWW* |
Ga0126384_106501111 | 3300010046 | Tropical Forest Soil | ARASVKRLSFRATRESPQSAIEALRTGADSVTLGKRAKPLIRRPKMIARVASITFALLLFGQSAFSDEPGYTRHRHRHAAIYPHVVELVAPPFSGQFVINGYRYDGVAPACRGWVPGQPVRLVSGSWYGDCASATFYNGATRNTCETLCRGRAALWW* |
Ga0126382_100017873 | 3300010047 | Tropical Forest Soil | MIARVASITFTLLLFSQSAFSDEPGYTQHRHRHAVVYPHVVELVAPPFSGQFVINGYRYDGIAPACFGWVPGQPVRLVSGSWYGDCASAIFYNGATRNTCETVCRGSASWWW* |
Ga0126370_100724795 | 3300010358 | Tropical Forest Soil | MIARVASITFVLLLFSQSAFSDEPGYTRHRHRYAAIYPHVVELVAPPFSGQFVINGYRYVGVAPACRGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETVCRGSVSWWW* |
Ga0126376_104010881 | 3300010359 | Tropical Forest Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYASIYPHVVELVAPPFSGQLVINGFRYDGVAPACLGWVPGQPVRLVSGSFYGDCASATFYNGITRNTCETVCRGRAWSGW* |
Ga0126372_123042071 | 3300010360 | Tropical Forest Soil | MIARVASIAFVLLLCQPAFSDEPGYTRHRHRDGAVYPHVVELVAPPFSGQFVINGFRYDGVAPACMGWVPGQPVRLVSGSWYGDCASATFYNGITRDTCETVCRGRAW |
Ga0126378_102486082 | 3300010361 | Tropical Forest Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGITRNTCETVCRGRAWRGW* |
Ga0126378_102878121 | 3300010361 | Tropical Forest Soil | MTARLALMTCFALLLCQQAFSDEPGYTRHRQRHYPSGHHVVELVAPPFSGRFIINGFHYDGVAPACLGWVPGQPVRLVSGSWFGDCASATFYN |
Ga0126377_100860742 | 3300010362 | Tropical Forest Soil | MIARVASITFTLLLFSQSAFSDEPGYTQHRHRHAAVYPHVVELVAPPFSGQFVINGYRYDGIAPACFGWVPGQPVRLVSGSWYGDCASATFYNGATRNACETVCRGSASWWW* |
Ga0126377_101044414 | 3300010362 | Tropical Forest Soil | MIARVASITIALLLLGQSAFSDEPGYSRHRYRDAAIYPHVVELVAPPFSGQLVINGFRYDGVAPACLGWVPGQPVRLVSGSFYGDCASATFYNGVTRNTCETVCRGRAWSGW |
Ga0126377_106603872 | 3300010362 | Tropical Forest Soil | MIVRVASVICLALLLCQPVFADEPSYTRHRHRHYSVAPHVVELVAPPFSGRFVINGFRYDGVAPACLRWLPGQPVSLVSGSWFGDCDSATFYNVSTRTTCQTLCRGRAWW* |
Ga0126377_107698762 | 3300010362 | Tropical Forest Soil | MKMIVRIASVTVALLLCQTAFADEAGYTRHRHRHYLPPAHHVVEVVVPPYSGRFVINGFRYDGTGPACLAWVPGERVSLISGSWFGDCASATFYNVSRGSTCTTQCLGRAWW* |
Ga0126377_113388622 | 3300010362 | Tropical Forest Soil | MIARVASITFALLLFGQSAFSDEPGYTRHRHRHAAIYPHVVELVAPPFSGQFVINGYRYDGVAPACRGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETVCRGSASWWW* |
Ga0126379_101181002 | 3300010366 | Tropical Forest Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETVCRGRAWRGW* |
Ga0126381_1018689272 | 3300010376 | Tropical Forest Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETVCRGRAWLGW* |
Ga0126383_102416022 | 3300010398 | Tropical Forest Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYASIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETVCRGRAWRGW* |
Ga0126383_102503532 | 3300010398 | Tropical Forest Soil | MIARVASITFTLLLFSQSAFSDEPGYTQHRHRHAVVYPHVVELVAPPFSGQFVINGYRYDGIAPACFGWVPGQPVRLVSGSWYGNCASATFYNGATRNACETVCRGSASWWW* |
Ga0134122_100340502 | 3300010400 | Terrestrial Soil | MIARVASIAFVLLLCQPAFSDEPGNMRHRHRHFAVYPHVVELVAPPFSGQFVINGFRYDGVTPACLGWVPGQPVRLVSGSWYGDCTNATFYNSSTRNTCETVCRGRAWW* |
Ga0124850_10042384 | 3300010863 | Tropical Forest Soil | MIARVASITFVLLLFSQSAFSDEPGYTRHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETVCRGRAWRGW* |
Ga0124850_10086791 | 3300010863 | Tropical Forest Soil | ETENEIARVASITFTLLLFSQSAFSDEPGYTQHRHRHAVVYPHVVELVAPPFSGQFVINGYRYDGIAPACFGWVPGQPVRLVSGSWYGDCASATFYNGATRNACETVCRGSASWWW* |
Ga0126375_106508662 | 3300012948 | Tropical Forest Soil | MIARVASITFALLLFCQSAFSDEPGYTRHRHRHVSVYPHVVELVAPPFSGQFVINGYRYDGVAPACRGWVPGQPVRLVSGSWYGDCASATFYNGVTR |
Ga0126375_118386431 | 3300012948 | Tropical Forest Soil | MKMIVRIASVTVALLLCQTAFADEAGYTRHRHRHYLPPAHHVVEVVVPPYSGRFVINGFRYDGVGPACLAWVPGERVRLISGSWFGDCASATFYNVSRGSTCTTQCLG |
Ga0126375_118718491 | 3300012948 | Tropical Forest Soil | RKFVTRGAIHSAHTRRTQMNVRLAPLVCFALLLCQSAFADEPGYTRHRHRHYSAAPHIVELVAPPYSGRFVINGFRYDGVTPACLSWVPGQPVRLISGSWFGDCDNASFYNVSTRTTCQTLCRGRAWW* |
Ga0164299_117057681 | 3300012958 | Soil | LLLISQPAFSDEPGNVRHRHRHAAIYPHVVELVAPPFSAQFVINGYRYDGVAPACRSWVPGQPVRLVSGSWYGDCASATFYNSATRTTCETVCRGSASWWW* |
Ga0126369_128559231 | 3300012971 | Tropical Forest Soil | MIARVASITFALLLFSQSAFSDEPGYTRHRYRDAAIYPHVVELVTPPFSGQLVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETVCRGRAWR |
Ga0164307_103994132 | 3300012987 | Soil | MIARVASITFALLLICQPAFSDEPGNVRHRHRHAAIYPHVVELVAPPFSGQFVINGYRYDGVAPACRGWVPGQPVRLVSGSWYGDCAGATFYNGATRNTCETVCRGSASWWW* |
Ga0157374_111130251 | 3300013296 | Miscanthus Rhizosphere | ASITFALLLICQPAFSDEPGNVRHRHRHTAIYPHVVELVAPPFSGQFVINGYRYDGVAPACRGWVPGQPVRLVSGSWYGDCAGATFYNGATRNTCETVCRGSASWWW* |
Ga0163162_122564092 | 3300013306 | Switchgrass Rhizosphere | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDAAVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGITRDTCETV |
Ga0163162_134677942 | 3300013306 | Switchgrass Rhizosphere | QPAFSDEPGNVRHRHRHTAIYPHVVELVAPPFSGQFVINGYRYDGVAPACRGWGPGQPVRLVSGSWYGDCAGATFYNGATRNTCETVCRGSASWWW* |
Ga0132255_1022108432 | 3300015374 | Arabidopsis Rhizosphere | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDGAVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGITRDTCETVCRGRAWWRGW* |
Ga0132255_1052210612 | 3300015374 | Arabidopsis Rhizosphere | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDAAVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFY |
Ga0182032_100003857 | 3300016357 | Soil | MIARVASITFALLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETICRGRAWRGW |
Ga0187785_100120063 | 3300017947 | Tropical Peatland | MIARVASITIALLLLTQSAFSDEPGYSRHRYRDAAIYPHVVELVAPPFSGQFVINGFRYDGLAPACLGWVPGQPVRLVSGSFYGDCASATFYNGVTRNTCETVCRGRAWSGW |
Ga0184625_100403023 | 3300018081 | Groundwater Sediment | MIARIASVTCFALVLCQPAFADEAGYTRHRHRHYVSSGHHVVELVAPPYSGRFVINGFRYDGVAPACLRWVPGQPVRLISGSWFGDCVSATFYNASQHSTCETLCRGRAWW |
Ga0210380_104265701 | 3300021082 | Groundwater Sediment | MLRTGPVQVKLRRRAAIYAMGFKMITRAGSVIFALLVCQPAFADEPAYTRHRHRHYLPSTRHVVELVAPPFSGQFVINGFRYDGVAPACYRWVPGQPVRLISGSWFGDCASATFYNVSTRDTCQTLCRGRA |
Ga0207712_110762502 | 3300025961 | Switchgrass Rhizosphere | MIARVASITFALLLICQPAFSDEPGNVRHRHRHTAIYPHVVELVAPPFSGQFVINGYRYDGVAPACRGWVPGQPVRLVSGSWYGDCAGATFYNGA |
Ga0207668_101833723 | 3300025972 | Switchgrass Rhizosphere | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDGAVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGIT |
Ga0208525_10019504 | 3300027288 | Soil | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDAAVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGITR |
Ga0207983_10088441 | 3300027310 | Soil | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDAAVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASAT |
Ga0209814_101938612 | 3300027873 | Populus Rhizosphere | AGASSLASPSGYARMDILRERVNVLSFISLIHRRIKMIVRVASVSCLALLLCQPAFGDESTYTRHRHRHYLAAPHVVELVAPPYSGRFVINGFRYDGVAPACLRWVPGQPVRLVSGSWFGDCDSATFYNVSTRTACQTLCRGRAWR |
Ga0209382_100020063 | 3300027909 | Populus Rhizosphere | MIVRVASVSCLALLLCQPAFGDESTYTRHRHRHYLAAPHVVELVAPPYSGRFVINGFRYDGVAPACLRWVPGQPVRLVSGSWFGDCDSATFYNVSTRTACQTLCRGRAWR |
Ga0209069_101733602 | 3300027915 | Watersheds | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDAAVYPHVVELVAPPFSGQFVINGFRYDGVTPACLGWVPGQPVRLVSGSWHGDCANATFYNSSTRNTCETVCRGRAWGW |
Ga0307290_102266292 | 3300028791 | Soil | SFGEASDDPEFFWNWASKTPVFATSPMLRTGPVQVKLRRRAAIYAMGFKMITRAGSVIFALLVCQPAFADEPAYTRHRHRHYLPPTRHVVELVAPPFSGQFVINGFRYDGVAPACYRWVPGQPVRLISGSWFGDCASATFYNVSTRDTCQTLCRGRAGWW |
Ga0307296_106078291 | 3300028819 | Soil | MLRTGPVQVKLRRRAAIYAMGFKMITRAGSVIFALLVCQPAFADEPAYTRHRHRHYLPPTRHVVELVAPPFSGQFVINGFRYDGVAPACYRWVPGQPVRLISGSWFGDCASATFYNVSTRDQTLCRGRAGWW |
Ga0170824_1078684182 | 3300031231 | Forest Soil | MITRAALVMFGLLVCQPTFADEPAYTRHRHRHHLPPTRHVIELVAPPFSGQFVINGFRYDGVAPACYRWVPGQPVRLISGSWLGDCASATFYNASTRDTCQTVCRGRAGWW |
Ga0318516_100332843 | 3300031543 | Soil | ANEALRTGADSVTLGKRAEPFIRRLKMIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETICRGRAWRGW |
Ga0318534_100824693 | 3300031544 | Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETICRGRAWRGW |
Ga0318560_105403382 | 3300031682 | Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETICRGSAWRGW |
Ga0307469_115998411 | 3300031720 | Hardwood Forest Soil | ASITFALLLISQPAFSDEPGNVRHRHRHAAIYPHVVELVAPPFSAQFVINGYRYDGVAPACRSWVPGQPVRLVSGSWYGDCASATFYNSATRTTCETVCRGSASWWW |
Ga0318501_102045122 | 3300031736 | Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETICRGRAWRG |
Ga0318494_106290171 | 3300031751 | Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCANATFYNGV |
Ga0318537_103014571 | 3300031763 | Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCET |
Ga0318576_100257871 | 3300031796 | Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCE |
Ga0318567_109040082 | 3300031821 | Soil | ITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETICRGRAWRGW |
Ga0318564_104965322 | 3300031831 | Soil | LFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETICRGRAWRGW |
Ga0318512_101968092 | 3300031846 | Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVT |
Ga0318544_102035922 | 3300031880 | Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETICRGR |
Ga0310900_113557882 | 3300031908 | Soil | MIARVASIAFALLLCQPAFSDEPGYTRHRHRDAAVYPHVVELVAPPFSGQFVINGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNG |
Ga0310913_1000014918 | 3300031945 | Soil | MIARVASITFALLLFSQSAFSDEPGYTRHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETICRGRAWRGW |
Ga0318549_101463112 | 3300032041 | Soil | MIARVASITFVLLLFSQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETIC |
Ga0307471_1020638562 | 3300032180 | Hardwood Forest Soil | TFALLLISQPAFSDEPGNVRHRHRHAAIYPHVVELVAPPFSAQFVINGYRYDGVAPACRSWVPGQPVRLVSGSWYGDCAGATFYNGATRNTCETVCRGSASWWW |
Ga0307472_1004983262 | 3300032205 | Hardwood Forest Soil | MIPRVASITFALLLISQPAFSDEPGNVRHRHRHAAIYPHVVELVAPPFSAQFVINGYRYDGVAPACRSWVPGQPVRLVSGSWYGDCASATFYNSATRTTCETVCRGSASWWW |
Ga0318519_100119922 | 3300033290 | Soil | MIARVASITFVLLLFRQSAFSDEPGYARHRHRYAAIYPHVVELVAPPFSGQLVVNGFRYDGVAPACLGWVPGQPVRLVSGSWYGDCASATFYNGVTRNTCETICRGRAWRGW |
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