Metagenome / Metatranscriptome Family F095733

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095733
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	97 residues
Representative Sequence	LADKLFPVVPDTGTLKAARLASEVTGDPGRWVRLDCQHIRHVQQPVEPGQLLECPTCPPSVAGGLPAHRVLGQGPERRRRAWLDAGPQSP
Number of Associated Samples	76
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	40.00 %
% of genes near scaffold ends (potentially truncated)	86.67 %
% of genes from short scaffolds (< 2000 bps)	90.48 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (35.238 % of family members)
Environment Ontology (ENVO)	Unclassified (40.952 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.762 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.56% β-sheet: 14.41% Coil/Unstructured: 72.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00501	AMP-binding	35.24
PF00106	adh_short	10.48
PF00365	PFK	8.57
PF13193	AMP-binding_C	5.71
PF07690	MFS_1	4.76
PF00583	Acetyltransf_1	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	8.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
All Organisms	root	All Organisms	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
cellular organisms	root	All Organisms → cellular organisms	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.19 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.33 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	14.29 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.57 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	1.90 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	14.29 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.76 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	1.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	14.29 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.76 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	14.29 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.76 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	1.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	14.29 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.76 %
Rubrobacter indicoceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter indicoceani	1.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003203\|JGI25406J46586_10257439	Not Available	513	Open in IMG/M
3300003373\|JGI25407J50210_10041775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter indicoceani	1174	Open in IMG/M
3300003373\|JGI25407J50210_10180995	Not Available	520	Open in IMG/M
3300003373\|JGI25407J50210_10183479	Not Available	516	Open in IMG/M
3300005562\|Ga0058697_10057279	Not Available	1511	Open in IMG/M
3300005562\|Ga0058697_10347107	Not Available	721	Open in IMG/M
3300005937\|Ga0081455_10096881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2378	Open in IMG/M
3300005981\|Ga0081538_10021971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4637	Open in IMG/M
3300005981\|Ga0081538_10093980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1537	Open in IMG/M
3300005983\|Ga0081540_1354294	Not Available	502	Open in IMG/M
3300006049\|Ga0075417_10156298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1064	Open in IMG/M
3300006194\|Ga0075427_10024224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	975	Open in IMG/M
3300006844\|Ga0075428_100524046	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300006854\|Ga0075425_100051150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4628	Open in IMG/M
3300007076\|Ga0075435_100208237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1658	Open in IMG/M
3300009147\|Ga0114129_12641802	Not Available	599	Open in IMG/M
3300009789\|Ga0126307_10464786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1021	Open in IMG/M
3300010037\|Ga0126304_10139046	Not Available	1563	Open in IMG/M
3300010037\|Ga0126304_10884798	Not Available	607	Open in IMG/M
3300010038\|Ga0126315_10005636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5596	Open in IMG/M
3300010038\|Ga0126315_10037928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2550	Open in IMG/M
3300010038\|Ga0126315_10196156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1214	Open in IMG/M
3300010040\|Ga0126308_10242423	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300010040\|Ga0126308_10642220	Not Available	726	Open in IMG/M
3300010042\|Ga0126314_10066895	All Organisms → cellular organisms → Bacteria	2378	Open in IMG/M
3300010042\|Ga0126314_10388910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1004	Open in IMG/M
3300010042\|Ga0126314_10474821	Not Available	906	Open in IMG/M
3300010042\|Ga0126314_10731160	Not Available	726	Open in IMG/M
3300010044\|Ga0126310_10585255	Not Available	830	Open in IMG/M
3300010045\|Ga0126311_10279324	Not Available	1249	Open in IMG/M
3300010145\|Ga0126321_1490020	All Organisms → cellular organisms → Bacteria → Terrabacteria group	916	Open in IMG/M
3300010166\|Ga0126306_11677868	Not Available	530	Open in IMG/M
3300010166\|Ga0126306_11869807	Not Available	503	Open in IMG/M
3300010362\|Ga0126377_12656954	Not Available	576	Open in IMG/M
3300010399\|Ga0134127_11893240	Not Available	673	Open in IMG/M
3300010999\|Ga0138505_100045502	Not Available	626	Open in IMG/M
3300012204\|Ga0137374_10113236	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2519	Open in IMG/M
3300012938\|Ga0162651_100008359	Not Available	1217	Open in IMG/M
3300012941\|Ga0162652_100077514	Not Available	574	Open in IMG/M
3300014487\|Ga0182000_10120918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	908	Open in IMG/M
3300014487\|Ga0182000_10409139	Not Available	604	Open in IMG/M
3300014488\|Ga0182001_10513599	Not Available	555	Open in IMG/M
3300014488\|Ga0182001_10648275	Not Available	516	Open in IMG/M
3300017965\|Ga0190266_10240176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	900	Open in IMG/M
3300017965\|Ga0190266_10762491	Not Available	615	Open in IMG/M
3300018465\|Ga0190269_10358432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	881	Open in IMG/M
3300018465\|Ga0190269_11108799	Not Available	611	Open in IMG/M
3300018466\|Ga0190268_10601319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	779	Open in IMG/M
3300018466\|Ga0190268_11723019	Not Available	560	Open in IMG/M
3300018469\|Ga0190270_10567411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1098	Open in IMG/M
3300019279\|Ga0184642_1100498	Not Available	574	Open in IMG/M
3300019377\|Ga0190264_10446506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	860	Open in IMG/M
3300019377\|Ga0190264_10516135	Not Available	823	Open in IMG/M
3300020016\|Ga0193696_1092030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	783	Open in IMG/M
3300021078\|Ga0210381_10019731	Not Available	1776	Open in IMG/M
3300022756\|Ga0222622_10810127	Not Available	684	Open in IMG/M
3300025972\|Ga0207668_10105673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2102	Open in IMG/M
3300026672\|Ga0208214_102708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	718	Open in IMG/M
3300026686\|Ga0208213_103129	Not Available	577	Open in IMG/M
3300027750\|Ga0209461_10027707	Not Available	1063	Open in IMG/M
3300027809\|Ga0209574_10352950	Not Available	514	Open in IMG/M
3300028590\|Ga0247823_11475197	Not Available	510	Open in IMG/M
3300028705\|Ga0307276_10177450	Not Available	553	Open in IMG/M
3300028707\|Ga0307291_1032727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1221	Open in IMG/M
3300028712\|Ga0307285_10043672	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1104	Open in IMG/M
3300028712\|Ga0307285_10246241	Not Available	507	Open in IMG/M
3300028720\|Ga0307317_10269003	Not Available	576	Open in IMG/M
3300028722\|Ga0307319_10042888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1414	Open in IMG/M
3300028755\|Ga0307316_10396959	Not Available	510	Open in IMG/M
3300028771\|Ga0307320_10147918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	907	Open in IMG/M
3300028771\|Ga0307320_10210771	Not Available	761	Open in IMG/M
3300028771\|Ga0307320_10266861	Not Available	676	Open in IMG/M
3300028778\|Ga0307288_10243603	Not Available	703	Open in IMG/M
3300028778\|Ga0307288_10376090	Not Available	575	Open in IMG/M
3300028782\|Ga0307306_10083510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	835	Open in IMG/M
3300028796\|Ga0307287_10015939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2575	Open in IMG/M
3300028799\|Ga0307284_10428424	Not Available	540	Open in IMG/M
3300028807\|Ga0307305_10291418	All Organisms → cellular organisms → Bacteria → Terrabacteria group	743	Open in IMG/M
3300028810\|Ga0307294_10156913	Not Available	762	Open in IMG/M
3300028811\|Ga0307292_10110084	Not Available	1089	Open in IMG/M
3300028811\|Ga0307292_10479596	Not Available	532	Open in IMG/M
3300028814\|Ga0307302_10664364	Not Available	518	Open in IMG/M
3300028828\|Ga0307312_10599466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	729	Open in IMG/M
3300028875\|Ga0307289_10397978	Not Available	566	Open in IMG/M
3300028876\|Ga0307286_10029680	Not Available	1798	Open in IMG/M
3300028880\|Ga0307300_10140886	Not Available	753	Open in IMG/M
3300028881\|Ga0307277_10253193	Not Available	777	Open in IMG/M
3300030513\|Ga0268242_1151937	Not Available	512	Open in IMG/M
3300030514\|Ga0268253_10050266	Not Available	1093	Open in IMG/M
3300030514\|Ga0268253_10072118	Not Available	953	Open in IMG/M
3300031091\|Ga0308201_10010121	Not Available	1712	Open in IMG/M
3300031092\|Ga0308204_10007503	Not Available	1846	Open in IMG/M
3300031548\|Ga0307408_100360235	Not Available	1237	Open in IMG/M
3300031731\|Ga0307405_10609887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	892	Open in IMG/M
3300031731\|Ga0307405_10934293	Not Available	736	Open in IMG/M
3300031824\|Ga0307413_10335674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter indicoceani	1160	Open in IMG/M
3300031824\|Ga0307413_10428831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1043	Open in IMG/M
3300031824\|Ga0307413_10442582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1029	Open in IMG/M
3300031903\|Ga0307407_10044658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2499	Open in IMG/M
3300031903\|Ga0307407_10950308	Not Available	662	Open in IMG/M
3300031995\|Ga0307409_101830401	Not Available	636	Open in IMG/M
3300032002\|Ga0307416_100835481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1018	Open in IMG/M
3300032002\|Ga0307416_101113673	Not Available	894	Open in IMG/M
3300032005\|Ga0307411_10575862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	964	Open in IMG/M
3300032159\|Ga0268251_10228836	Not Available	742	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.62%
Host-Associated	Host-Associated	32.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.81%
Plants	Host-Associated → Plants	32.38%
Aquatic	Environmental → Aquatic	3.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.10%
Phylloplane	Host-Associated → Plants → Phylloplane	5.71%
Roots	Host-Associated → Plants → Roots	4.76%
Freshwater	Environmental → Aquatic → Freshwater	2.86%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.86%
Sediment	Environmental → Aquatic → Sediment	0.95%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.14%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	5.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.86%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.90%
Loam	Environmental → Terrestrial → Soil → Loam	1.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.95%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	58.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.14%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	4.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	35.24%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	15.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	11.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.71%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	4.76%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.86%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.90%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.95%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026672	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1102 (SPAdes)	Environmental	Open in IMG/M
3300026686	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1097 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25406J46586_102574391	3300003203	Tabebuia Heterophylla Rhizosphere	LADKLFPVVPDTGTLKAARLASEVTGDPGRWVRLDCQHIRHVQQPVEPGQLLECPTCPPSVAGGLPAHRVLGQGPERRRRAWLDAGPQSP
JGI25407J50210_100417752	3300003373	Tabebuia Heterophylla Rhizosphere	MADKLFPVVPDTGTMKAARLASEVTGDPGRWVRLDCQHLRHVQQPVEPGQALECPTCPPSPGGVLSSHTVLRRGPERRRRAWLDAGPQAPGKAGAFAAEAVTLAGPFSLVDDAGRMASE
JGI25407J50210_101809951	3300003373	Tabebuia Heterophylla Rhizosphere	VADNLFPVVPDTGTLKAARLASQVTGDPGRWVRLDCQHLRHVQQPVEPGALLECPTCPPSIGGTLPAHRVLGQGPERRRRAWLDAGPQAPGRAGAFAAEAVTQT
JGI25407J50210_101834791	3300003373	Tabebuia Heterophylla Rhizosphere	LADNLFPVVPDTGTLKAARLATQVTGDPGRWVCLDCHHLRHVQHPVEPGELLECPTCPPSVGGGLPAHRVLGQGPGRRRRAWLDAGPQAP
Ga0058697_100572791	3300005562	Agave	LADKLFPVVPDTGTPKAARLATEVTGNPGRWVRLDCQHLRHVQQPVEPGQLLECPTCPPSVSGGLPAHRVLREASGGG*
Ga0058697_103471071	3300005562	Agave	LADNLFPVVPDTGTPKAARLASEVTGNPGRWVRLDCQHLRHVQRPVEPGQPLECPTCAPSVAGGLPVRRVLDQGPERRRRARLDAGPQAPGRAGAFAAEAVTQAGPVSLVDDAGRMASELVASALRHTDAPV
Ga0081455_100968812	3300005937	Tabebuia Heterophylla Rhizosphere	VPDTGTLKAAELASQVTGDPGRWVRLDCQHLRHVQQPVEPGQRLECPTCPPSSGGVLPWHAVLPA*
Ga0081538_100219714	3300005981	Tabebuia Heterophylla Rhizosphere	MADNLFPVVPDTGTPKAARLASEVTGDPGRWVRLDCQHERHVQQPVEPGEVLECPTCPPSPVGALASHRVLPAGQPGPS*
Ga0081538_100939802	3300005981	Tabebuia Heterophylla Rhizosphere	LADSLFPVVPDTGTLKAARLAVQITGNPGRWVRLDCRHLRHVQQPVEPGEELECPTCPPSVGGTLPVHRVLGKTPERRRRAWLDAGPQAPRRAGAFAAEAVTQDGPISLVDDAGRMASELVASALRHTDAPVELT
Ga0081540_13542942	3300005983	Tabebuia Heterophylla Rhizosphere	MGVIALADKLFPVVPDTGTLKAARLASEVTGNPGRWVRLDCGHLRHVQQPVEPGELLECPMCPPSVAGGLPAHRVLRQDPERRHPAWLDARPQA
Ga0075417_101562982	3300006049	Populus Rhizosphere	LADKLFPVVPDTGTLKAARLASEVTGNPGCWVRLDCQHLRHVQQPVEPGRLLECPTCPPSVAGGLPLHRVLSRGPERGRRPCPAPGGRRPARPGG
Ga0075427_100242241	3300006194	Populus Rhizosphere	LADKLFPVVPDTGTQKAARLASEVTGDPGRWVRLDCQHMRHVQRAVEPGQLLECPTCPPSVAGGLPAHRVLGQGPERRRRAWLDAGPQAPGRAGAFAVEAVTQAGPVGLVDDAGRMASELVASAIRHTHAPVEL
Ga0075428_1005240462	3300006844	Populus Rhizosphere	LADNLFPVVPDTGTLKAALLASQVTGDPGRWVRLDCEHLRHVQQPVEPGQRLECPTCPPSSGGVLPWHAVLPA*
Ga0075425_1000511504	3300006854	Populus Rhizosphere	LADKLFPVVPDTGTLKAARLASEVTGNPGCWVRLDCQHLRHVQQPVEPGRLLECPTCPPSVAGGLPLHRVLSRGPERGRRAWLDAGPQAPGRAGAFAAETVAQTGPVGLVDDAVRMASEL
Ga0075435_1002082371	3300007076	Populus Rhizosphere	LADKLFPVVPDTGTLKAARLASEVTGNPGCWVRLDCQHLRHVQQPVEPGRLLECPTCPPSVAGGLPLHRVLSRGPERGRRAWLDAGPQAPGRAGAFAAETVAQTGPVGLVDDAVRMASELVASAIRH
Ga0114129_126418021	3300009147	Populus Rhizosphere	MADKLFPVVPDTGTWKAARLATEITGDPGRWVRLDCQHLRHVQRPVEPGQELECPTCPPSIGGGLPSHRVLRKGPERRRRAWLDAGPQAPGKAGAFAAEAVIQAGPMGLVDDAGRMA
Ga0126307_104647861	3300009789	Serpentine Soil	LAHNLFPVVPDTGTVKAARLATEITGNPGRWVRLDCQHLRHVQQPVEAGQELECPTCPPSAGGALPSHRVLGRGPERRRRAWLDAGPYAPGEAGAFAAEA
Ga0126304_101390462	3300010037	Serpentine Soil	LADNLFPAVPDTGTPKAARLATEITGNPGSWVRLDCQHVRHVQRPVAPGQELECPVCPPSVGGGLPSRRVLGRGPERRRRAWLDAGPQAPGEAGAFAAESVTRAGPMSLVDDAGRMASELVASALRHTDAPVEL
Ga0126304_108847982	3300010037	Serpentine Soil	VATNLFPVVPDTGTLKAARLSTEVTGNPGRWVRLDCQHLRHVQQPVEPGQELECPTCPPSVGGGLPSHRVLGQGPERRRRAWLDAGPYAPGEAGAFAAEAVTQAGPISLVDDAGRMASELVASALRHTDAPVEL
Ga0126315_100056366	3300010038	Serpentine Soil	LADNLFPVVPDTGTPKAARLASEVTGNPGRWVRLDCQHLRHVQRPVEPGQLLECPTCPPSVAGGLPAHRVLGQDPEPGG*
Ga0126315_100379281	3300010038	Serpentine Soil	LADNLFPVVPDTGTLKAARLASQVTGNPGRWVRLDCQHLRHVQQPVEPGELLECPTCPPSIGGALPAHRVLGQGPERRRRAWLDAGPQAPGRAGAFAVEAVTQTGPVGLIDDAGRMASEL
Ga0126315_101961562	3300010038	Serpentine Soil	LADNLFPVVPDTGTLKAAQLATEITGNPGRWVRLDCQHLRHVQQPVEPGELLECPTCPPSIGGGLPAHRVLGRGAGRRRRAWLEAGPQAPRRAGAFAAEAVALAGPVTLVDDAGRMASELVASAIRHTDAPVELT
Ga0126308_102424232	3300010040	Serpentine Soil	LADNVFPVVPDTGTPKAARLASEVTGNPGRWVRLDCQHLRHVQQPVEPGQLLECPTCPPSVAGGLPAHRVLGQDPEPDG*
Ga0126308_106422202	3300010040	Serpentine Soil	LADNLFPAVPDTGTPKAARLATEITGNPGSWVRLDCQHVRHVQRPVAPGQELECPVCPPSVGGGLPSRRVLGRGPERRRRAWLDAGPQAPGE
Ga0126314_100668952	3300010042	Serpentine Soil	LADNVFPVVPDTGTPKAARLASEVTGNPGRWVRLDCQHLRHVQRPVEPGQLLECPTCPPSVAGGLPAHRVLGQDPEPGG*
Ga0126314_103889101	3300010042	Serpentine Soil	VATNLFPVVPDTGTLKAARLSTEVTGNPGRWVRLDCQHLRHVQQPVEPGQELECPTCPPSVGGGLPSHRVLGQGPEL
Ga0126314_104748212	3300010042	Serpentine Soil	LAHNLFPVVPDTGTLKAARLASQVTGDPGRWVRLDCQHLRHVQQPVEPGKLLECPTCPPSVGGGLPAHRV
Ga0126314_107311601	3300010042	Serpentine Soil	LADNLFPVVPDTGTLKAAQLATEITGNPGRWVRLDCQHLRHVQQPVEPGELLECPTCPPSVGGALPAHRVLGHGPERRRRAWLDAGPQAPGRAGAFAAEAVTQAGPSNLVDDAGRMASELVASAI
Ga0126310_105852552	3300010044	Serpentine Soil	LADNLFPVVPDTGTPKAARLASEVTGNPGRWVRLDCQHLRHVQQPVEPGQLLECPTCPPSVAGGLPAHRVLGQDPEPGG*
Ga0126311_102793241	3300010045	Serpentine Soil	LADNLFPAVPDTGTPKAARLATEITGNPGSWVRLDCQHVRHVQRPVAPGQELECPVCPPSVGGGLPSRRVLGRGPERRRRAWLDAGPQAPGEAGAFAAESVTRAGPMSLVDDAGRMASEL
Ga0126321_14900202	3300010145	Soil	LADKLFPVVPDTGTPKAARLATEVTGNPGRWVRLDCQHLRHVQQPVDPGQLLECPTCPPTVAGGLPVHRVL
Ga0126306_116778682	3300010166	Serpentine Soil	VATNLFPVVPDTGTLKAARLSTEVTGNPGRWVRLDCQHLRHVQQPVEPGQELECPTCPPSVAGALPSHRVLGQGPERRR
Ga0126306_118698071	3300010166	Serpentine Soil	LADNLFPVVPDTGTMKAARLASEVTGNPGRWVRLDCQHLRHVQQPVEPGQLLECPTCPPSVAGGLPAHRVLTQGAERRRRAWLDAGPQAPGRAGAFAAEAVTQAGPVGLVDDAGRMASELVASA
Ga0126377_126569542	3300010362	Tropical Forest Soil	MSLADNLFPVVPDTGTLKAALLASQVTGDPGRWVRLDCRHLRHVQQPVEPGQRLECPTCPPSSGGVLPWHAVLPA*
Ga0134127_118932402	3300010399	Terrestrial Soil	LAYNLFPVVPDTGTLKAARLATEITGNPGSWVRLDCQHIRHVQRPVEPGLELECPVCPPSVGGGLSLRRVLGRGPERRRRAWLD
Ga0138505_1000455021	3300010999	Soil	LADNLFPVVPDTGTLKAARLATEITGNPGNWVRLDCQHVRHVQRPVDPGLELECPVCPPSVGGGLALRR
Ga0137374_101132363	3300012204	Vadose Zone Soil	MIAVSDKPIPTVPDTGTEKAALLATEVTGNPGRWVRLDCQHTRHVQQPVRAGQVLECPRCPSSLGGALARRRVLHQS*
Ga0162651_1000083592	3300012938	Soil	LADKLFPVVPDTGTLKAARLATEVTGNPGRWVRLDCRHLRHVQQPVEPGQLLECPTCPPSVAGGLPVRRVLGRSAERRRRAWLGAGPQAPGKAGAFAAEAVTLAGPVSLVDDAG
Ga0162652_1000775141	3300012941	Soil	MADKLFPVVPDTGTWKAARLATEITGDPGRWVRLDCQHLRHVQRPVEPGQELECPTCPPSIGGGLPSHRVLRKGSERRRRAWLDAGPQAPGKAGAFAAEAVTRAGPISLVDDAGRMASELVASALR
Ga0182000_101209182	3300014487	Soil	MGVIAVADKLFPVVPDTGTLKAARLASEVTGNPGRWVRLDCQHLRHVQQPAEPGQLLECPTCPPSIGGGLPAHKVLRQGPERRRRAWLEA
Ga0182000_104091392	3300014487	Soil	LADKLFPVVPDTGTPKAARLATEVTGNPGRWVRLDCQHLRHVQQPAEPGQLLECPTCPPSVSGGLPAHRVLREASGGG*
Ga0182001_105135991	3300014488	Soil	LADKLFPVVPDTGTLKAARLATEITGNPGRWVRLDCQHLRHVQQPVEPGQLLECPACPPSVGGTLPAHRVLPQVELTMDVAEGELRQL*
Ga0182001_106482752	3300014488	Soil	LADSLFPVVPDTGTLKAARLATQITGNPGRWVRLDCQHLRHVQQPVEPGHELECPTCPPSVGGALPVHRVLGKSPERRR
Ga0190266_102401761	3300017965	Soil	VAPNLFPVVPDTGTPKAARLASEITGNPGRWVRLDCQHLRHVQHPVEPGELLECPTCPVSVGGSLSSHRVLGQGPGRRRRAWLDAGPQAPGQAGAFAAEAVTHSGPI
Ga0190266_107624911	3300017965	Soil	LADNLFPVVPDTGTLKAARLATEITGNPGAWVRLDCQHVRHVQRPVEPGQELECPTCPPSVGGALPSHRVLGQGPERRRRAWLDAGPHAPGKAGAFAAEAVTQAGPIS
Ga0190269_103584321	3300018465	Soil	MADKLFPVVPDTGTLKAALLASEVTGDPGRWVRLDCQHLRHVQQPVEPGQELECPTCPPFIGGGLPSHR
Ga0190269_111087992	3300018465	Soil	LADNLFPVVPDTGTLKAARLATEITGNPGAWVRLDCQHIRHVQQPVEPGLELECPVCAPSVGGCLALRRVLGRG
Ga0190268_106013192	3300018466	Soil	VATNLFPVVPDTGTLKAARLATQVTGNPGRWVRLDCRHLRHVQQPVEPGQLLECPTCPPTVAGGLPVRRVLGRSAERR
Ga0190268_117230192	3300018466	Soil	MADKLFPVVPDTGTLKAARLASEVTGDPGRWVRLDCQHLRHVQQPVEPGHELECPTCPPSIGGALPSHRVLRKGPERRRRAWLDAG
Ga0190270_105674112	3300018469	Soil	MADKLFPVVPDTGTWKAARLATEITGDPGRWVRLDCQHLRHVQRPVEPGQELECPTCPPSIAGGLPSHRVLRKGPERRRRAWLDAGPQAPGKAGAFA
Ga0184642_11004982	3300019279	Groundwater Sediment	LADKLFPVVPDTGTLKAAQLATEITGNPGRWVRLDCQHLRHVQQPVEPGVLLECPTCPPSVGGTLSSHRVLGHGLDRHRQAWLDPGPQ
Ga0190264_104465061	3300019377	Soil	LAHNLFPVVPDTGTPKAARLASEVTGDPGRWVRLDCRHLRHVQQPVEPGQVLECPTCPPSSVGALPSRRALDKGTECRRHAWLDASPQAPGKAG
Ga0190264_105161352	3300019377	Soil	MADKLFPVVPDTGTLKAARLASEVTGDPGRWVRLDCQHLRHVQQPVEPGQELECPTCPPSIGGALPSHRVLRKGPERRRRAWLD
Ga0193696_10920301	3300020016	Soil	LADNLFPVVPDTGTLKAARLATEITGNPGNWVRLDCQHVRHVQRPVEPGLELECPACPPSVGGGLPSRRVLGRGPERRRRAWLD
Ga0210381_100197311	3300021078	Groundwater Sediment	VAPNLFPVVPDTGTPQAARLASELTGDPGRWVRLDCQHLRHVQHPVEPGELLECPTCPVSVGGCLSSHRVLDHGPGRRRRAWLDAGPQAPGQPGAFAAEAVTP
Ga0222622_108101272	3300022756	Groundwater Sediment	LADNLFPVVPDTGTLKAARLATEITGNPGNWVRLDCQHVRHVQRPVEPGLELECPACPPSVGGGLPSRRVLGRGPERRRRAWLDAGPQAPGKAGA
Ga0207668_101056733	3300025972	Switchgrass Rhizosphere	LAYNLFPVVPDTGTLKAARLATEITGNPGSWVRLDCQHIRHVQRPVEPGLELECPVCPPSVGGGLSLRRVLGRGPERRRRAWLDAGPQAPGKAGA
Ga0208214_1027081	3300026672	Soil	LADKLFPVVPDTGTLKAARLATEVTGNPGRWVRLDCRHLRHVQQPVEPGQLLECPTCPPTVAGGLPGRRVLGRSAERRRRAWLDAGPQAPGKAGAFAAEAV
Ga0208213_1031291	3300026686	Soil	LADKLFPVVPDTGTLKAARLATEVTGNPGRWVRLDCRHLRHVQQPVEPGQLLECPTCPPTVAGGLPVRRVLLRSAERRRRAWLDAGPQAPGKAGAFAAEAVTLAGPVSLVDDAGRMASELVASALRHTDAP
Ga0209461_100277071	3300027750	Agave	ASEVTGNPGRWVRLDCQHLRHVQQPVEPGRLLECPTCPPSVSGGLPAHRVLREASGGG
Ga0209574_103529501	3300027809	Agave	TPKAARLASEVTGDPGRWVLLDCQHLRHVQQPVEPGELLECPTCPPSVSGGLPAHRVLREASAGA
Ga0247823_114751971	3300028590	Soil	LAYNLFPVVPDTGTLKAARLATEITGNPGSWVRLDCQHIRHVQRPVEPGLELECPVCPPSVGGGLSLRRVLGRGPERRRRAWLDAGPAPDAR
Ga0307276_101774501	3300028705	Soil	LADKLFPVVPDTGTLKAARLATEVTGNPGRWVRLDCRHLRHVQQPVEPGQLLECPTCPPSVAGGLPAHRVLGQGPERRRRAWLDADPLAPGRAGAFAAEAVTQAGPVGLVDDAGRM
Ga0307291_10327271	3300028707	Soil	LAYNLFPVVPDTGTLKAARLATEITGNPGSWVRLDCQHVRHVQRPVEPGLELECPVCPPSVGGGLSLRRVLGRGPERRRRAWLDAGPQAP
Ga0307285_100436722	3300028712	Soil	LADKLFPVVPDTGTLKAARLASEVTGDPGRWVRLDCQHVRHVQQPVEPGQLLECPTCPPSVAGGLPAHRV
Ga0307285_102462411	3300028712	Soil	LADNLFPVVPDTGTLKAARLATEITGNPGNWVRLDCQHVRHVQRPVEPGLELECPACPPSVGGGLPSRRVLGRGPERRRRAWLDAGPQAPGKAGAFAAESVTRAGPMSLVDDAGRMASELVASALRHTD
Ga0307317_102690032	3300028720	Soil	VAPNLFPVVPDTGTPQAARLASELTGDPGRWVRLDCQHLRHVQHPVEPGELLECPTCPVSVGGCLSSHRV
Ga0307319_100428881	3300028722	Soil	VATSLFPVVPDTGTLKAARLASEITGDPGRWVRLDCQHLRHVQHPVEPGELLECPTCPVSVGGGLSSHRVLRHGPGRRRRAWLDAGPQAPGQAGAFAAEAVTHSGPIGLVDDAG
Ga0307316_103969592	3300028755	Soil	LADNLFPVVPDTGTLKAARLATEITGNPGNWVRLDCQHVRHVQRPVEPGLELECPACPPSVGGGLPSRRVLGRGPERRRRAWLDAGPQ
Ga0307320_101479182	3300028771	Soil	MADKLFPVVPDTGTWKAARLATEITGDPGRWVRLDCQHLRHVQRPVEPGQELECPTCPPSTGGGLPSHRVLRKGPERRRRAWLDAGPQAPGKAGAFAAEAVTLSGPMGLVDDAGRMAS
Ga0307320_102107712	3300028771	Soil	VATSLFPVVPDTGTLKAARLASEITGDPGRWVRLDCQHLRHVQHPVEPGELLECPTCPVSVGGGLSSHRVLRHGPGRRRRAWLDAGPQAPGQAGAFAAEAVTHSGPIGLVDDAGRMASELVASALRHTDAPV
Ga0307320_102668612	3300028771	Soil	LAYNLFFPVVPDTGTPKAARLATEITGNPGNWVRLDCQHVRHVQRPVEPGLELECPLCPPSVGGGLALRRVLGRGPERRRR
Ga0307288_102436031	3300028778	Soil	VAPNLFPVVPDTGTPQAARLASELTGDPGRWVRLDCQHLRHVQHPVEPGELLECPTCPVSVGGCLSSHRVLDHGPGRRRRAWLDAGPQAPGQAGAFAAEAV
Ga0307288_103760901	3300028778	Soil	LAYNLFPVVPDTGTLKAARLATEITGNPGSWVRLDCQHVRHVQRPVEPGLELECPVCPPSVGGGLSLRRVLGRGPERRRRAWLDAGPQAPGKAGAFAAE
Ga0307306_100835102	3300028782	Soil	VATSLFPVVPDTGTLKAARLASEITGDPGRWVRLDCQHLRHVQHPVEPGELLECPTCPVSVGGGLSSHRVLGHGPGRRRRAWLDAGPQAPGQAGAFAAEAVTHSGPIGLVDDAG
Ga0307287_100159393	3300028796	Soil	LADNLFPVVPDTGTLKAARLATEITGNPGNWVRLDCQHVRHVQRPVEPGLELECPACPPSVGGGLPSRRVLGRGPERRRRA
Ga0307284_104284241	3300028799	Soil	LADKLFPVVPDTGTLKAARLASEVTGDPGRWVRLDCKHVRHVQQPVEPGQLLECPTCPPSVAGGLPAHRVLGQGPERRRRAWLDADPLAPGRAGAFAAEAVTQAGPVGLVDDAGRMASE
Ga0307305_102914181	3300028807	Soil	LADKLFPVVPDTGTLKAARLASEVTGDPGRWVRLDCKHVRHVQQPVEPGQLLECPTCPPSVAGGLPAHRVLGQGPERRRR
Ga0307294_101569132	3300028810	Soil	LADNLFPVVPDTGTLKAARLATEITGNPGAWVRLDCQHVRHVQRPVEPGLELECPVCPPSVGGGLALRRVLGRGPERRRRAWLDAGPQAP
Ga0307292_101100842	3300028811	Soil	LADNLFPVVPDTGTLKAARLATEITGNPGNWVRLDCQHVRHVQRPVEPGLELECPACPPSVGGGLPSRRVLGRGPERRRRAWLDAGPLAPGKAGAFAAESTAPGTGKVVSFELREAQASA
Ga0307292_104795961	3300028811	Soil	VAPNLFPVVPDTGTPQAARLASELTGDPGRWVRLDCQHLRHVQHPVEPGELLECPTCPVSVGGCLSSHRVLDHGPGRRRRAWLDA
Ga0307302_106643641	3300028814	Soil	VATSLFPVVPDTGTLKAARLASEITGDPGRWVRLDCQHLRHVQHPVEPGELLECPTCPVSVGGGLSSHRVLRHGPGRRRRAWLDAGPQAPGQAGAFAAEAVTHSG
Ga0307312_105994661	3300028828	Soil	LAYNLFPVVPDTGTLKAARLATEITGNPGSWVRLDCQHIRHVQRPVEPGLELECPVCPPSVGGGLSLRRVLGRGP
Ga0307289_103979781	3300028875	Soil	LADNLFPVVPDTGTLKAARLATEITGNPGNWVRLDCQHVRHVQRPVEPGLELECPACPPSVGGGLPSRRVLGRGPERRRRAWLDAGPLAP
Ga0307286_100296801	3300028876	Soil	LADNLFPVVPDTGTLKAARLATEITGNPGNWVRLDCQHVRHVQRPVEPGLELECPACPPSVGGGLPSRRVLGRGPERRRRAWLDAGPQAPGKAGAFAAESVTRAGPMS
Ga0307300_101408862	3300028880	Soil	MADKLFPVVPDTGTWKAARLATEITGDPGRWVRLDCQHLRHVQRPVEPGQELECPTCPPSTGGGLPSHRVLRKGPERRRRAWLDAGPQ
Ga0307277_102531932	3300028881	Soil	MGVIAVADKLFPVVPDTGTPKAARLASEVTGNPGCWVRLDCGHLRHVQQPAEPGQLLECPTCPPSIGGGLPAHKVLRQGPERRRRAWLEAGPQAPRRAGAFAAEAVTLAGPMGLVDDAGRMASELVASA
Ga0268242_11519371	3300030513	Soil	LADSLFPVVPDTGTLKAAKLAIQITGNPGRWVRLDCQHLRHVQRPVEPGQELECPTCPPSVGGVLPWHRVLGQRPGRRRRAWLDAGPQAPGRAGAFADEAVTQAGPISLVDDAG
Ga0268253_100502662	3300030514	Agave	LADKLFPVVPDTGTPKAARLATEVTGNPGRWVRLDCQHLRHVQQPVEPGQLLECPTCPPSVSGGLPAHRVLREASGGG
Ga0268253_100721181	3300030514	Agave	PLGVMPLAPNLFPVVPDTGTPKAARLASEVTGDPGRWVLLDCQHLRHVQQPVEPGELLECPTCPPSVSGGLPAHRVLREASAGA
Ga0308201_100101212	3300031091	Soil	LADKLFPVVPDTGTLKAARLASEVTGDPGRWVRLDCKHVRHVQQPVEPGQLLECPTCPPSVAGGLPAHRVLGQGP
Ga0308204_100075031	3300031092	Soil	LADKLFPVVPDTGTLKAARLASEVTGDPGRWVRLDCQHVRHVQQPVEPGQLLECPTCPPSVAGGLPAHRVLTQGAEQ
Ga0307408_1003602352	3300031548	Rhizosphere	LADNLFPVVPDTGTLKAARLATEITGNPGRWVRLDCQHLRHVQRPVEPGQELECPTCPPSVGGTLPVHRVLGKTQERRRRAWLDAGPQAVRRAGAFAAEAVTQDGPISLVDDAGRMASELVAS
Ga0307405_106098871	3300031731	Rhizosphere	LADKLFPVVPDTGTPKAARLASEVTGNPGRWVRLDCQHLRHVQQPVEPGELLECPTCPPSIGGGLPAHRVLAQGPGRRRR
Ga0307405_109342932	3300031731	Rhizosphere	VATNLFPVVPDTGTLKAARLSTEVTGNPGRWVRLDCQHLRHVQQPVEPGQELECPTCPPSVGGGLPSHRVLGQGPERRRRAWLDAGPYAPGE
Ga0307413_103356742	3300031824	Rhizosphere	LAHNLFPVVPDTGTLKAARLASQVTGDPGRWVRLDCQHLRHVQQPVEPGKLLECPTCPPSVGGGLPAHRVLGQGPGRRRRAWLDAGPQAPGRAGAI
Ga0307413_104288311	3300031824	Rhizosphere	LADNLFPVVPDTGTLKAARLASQVTGNPGRWVRLDCQHLRHVQQPVEPGELLECPTCPPSIGGALPAHRVLGQGPERRRRAWLDAGPQAPGRAGAFA
Ga0307413_104425821	3300031824	Rhizosphere	LADKLFPVVPDTGTPKAARLASEVTGNPGRWVRLDCQHLRHVQQPVEPGELLECPTCPPSVGGALPAHRVLGHGPERRRRAWLDAGPQAPGRAGAFAAEAVTQAGPSNLVDDAGRMASELVASAIRHTD
Ga0307407_100446581	3300031903	Rhizosphere	LADKLFPVVPDTGTLKAARLATEVTGNPGRWVRLDCRHLRHVQQPVEPGQLLECPTCPPTVAGGLPVRRVLGRSAERRRRAWLDAGPQAPGKAGAFAAEAVTLAGPVSLVDDA
Ga0307407_109503081	3300031903	Rhizosphere	LADNLFPVVPDTGTLKAARLATEITGNPGRWVRLDCQHLRHVQRPVEPGQELECPTCPPSVGGTLPVHRVLGKTQERRRRAWLDAGPQAARRAGAFAAEAVTQ
Ga0307409_1018304011	3300031995	Rhizosphere	LADNLFPVVPDTGTMKAARLATEVTGNPGRWVRLDCQHLRHVQQPVEPGQLLECPTCPPSVAGGLPAHRVLTQGAERRRRAWLDAGPQAPGRAGAFAAEAVTQAGPVGLVDDA
Ga0307416_1008354812	3300032002	Rhizosphere	LADNLFPAVPDTGTPKAARLATEITGNPGSWVRLDCQHVRHVQRPVAPGQELECPVCPPSVGGGLPSRRVLGRGPERRRRAWLDAGPQAPGEAGAFAAESVTRAGPMSLVD
Ga0307416_1011136731	3300032002	Rhizosphere	LAHNLFPVVPDTGTLKAARLASQVTGDPGRWVRLDCQHLRHVQQPVEPGKLLECPTCPPSVGGGLPAHRVLGQGPGRRRRAWLDAGPQAPGRAGAIVVEAVTQAGPIGLVDDAGRMASELVASAIRHAQAP
Ga0307411_105758622	3300032005	Rhizosphere	LADNLFPVVPDTGTLKAARLATEITGNPGRWVRLDCQHLRHVQRPVEPGQELECPTCPPSVGGTLPVHRVLGKTQERRRRAWLDAGPQAVRRAGAFAAEAVTQDGPISL
Ga0268251_102288361	3300032159	Agave	TGTPKAARLASEITGEPGRWVRLDCQHLRHVQQPVEPGELLECPTCPPSVSGGLPAHRVLREASAGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095733

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences