Metagenome Family F095728

Basic Information
Family ID	F095728
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	41 residues
Representative Sequence	VATPMLDRAVELYDKFMDMGFGEKDVAAMVDVIGALPRAKA
Number of Associated Samples	91
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.90 %
% of genes near scaffold ends (potentially truncated)	96.19 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.952 % of family members)
Environment Ontology (ENVO)	Unclassified (27.619 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.381 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.23% β-sheet: 0.00% Coil/Unstructured: 63.77%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00903	Glyoxalase	86.67
PF04140	ICMT	3.81
PF14833	NAD_binding_11	2.86
PF12697	Abhydrolase_6	1.90
PF03446	NAD_binding_2	0.95
PF12860	PAS_7	0.95
PF07536	HWE_HK	0.95
PF12681	Glyoxalase_2	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.95
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	95.24 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	94.29 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	36.19 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	20.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	20.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	20.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	20.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	20.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.90 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111022\|2221209445	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
2228664021\|ICCgaii200_c0432593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10101303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10126272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300000650\|AP72_2010_repI_A1DRAFT_1013826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1036608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	516	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1036733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1062073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300005332\|Ga0066388_102756276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300005447\|Ga0066689_10488902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	775	Open in IMG/M
3300005455\|Ga0070663_102147957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300005536\|Ga0070697_101271547	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300005713\|Ga0066905_100557141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	963	Open in IMG/M
3300005764\|Ga0066903_105717599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300005937\|Ga0081455_10001118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	33528	Open in IMG/M
3300006034\|Ga0066656_10976440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300006195\|Ga0075366_10784077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M
3300006800\|Ga0066660_11708194	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300006871\|Ga0075434_101648182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300009012\|Ga0066710_102899729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	673	Open in IMG/M
3300009100\|Ga0075418_12150775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300009101\|Ga0105247_10984542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300009156\|Ga0111538_10254629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2222	Open in IMG/M
3300009792\|Ga0126374_10206792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1247	Open in IMG/M
3300010043\|Ga0126380_11567365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300010046\|Ga0126384_11169289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300010358\|Ga0126370_11364430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300010358\|Ga0126370_12280784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300010360\|Ga0126372_10701337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	988	Open in IMG/M
3300010362\|Ga0126377_10336422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1501	Open in IMG/M
3300010362\|Ga0126377_11571109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300010366\|Ga0126379_13209964	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300010398\|Ga0126383_11951351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300010398\|Ga0126383_13250483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300010868\|Ga0124844_1006516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2474	Open in IMG/M
3300010868\|Ga0124844_1082752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1203	Open in IMG/M
3300010937\|Ga0137776_1883879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300012198\|Ga0137364_10472159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	942	Open in IMG/M
3300012203\|Ga0137399_10811000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	788	Open in IMG/M
3300012205\|Ga0137362_10015620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5719	Open in IMG/M
3300012206\|Ga0137380_10067582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3268	Open in IMG/M
3300012207\|Ga0137381_11110854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300012362\|Ga0137361_11520880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300012957\|Ga0164303_11471289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300012989\|Ga0164305_10441150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1009	Open in IMG/M
3300013308\|Ga0157375_11857639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300014307\|Ga0075304_1032326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1087	Open in IMG/M
3300015200\|Ga0173480_10905698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300016270\|Ga0182036_10506590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	957	Open in IMG/M
3300016294\|Ga0182041_10638991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	938	Open in IMG/M
3300016294\|Ga0182041_11730149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300016341\|Ga0182035_10698022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	884	Open in IMG/M
3300016341\|Ga0182035_10996210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	742	Open in IMG/M
3300016341\|Ga0182035_11863210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	545	Open in IMG/M
3300016357\|Ga0182032_11070997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300018056\|Ga0184623_10508020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300018071\|Ga0184618_10412559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300018073\|Ga0184624_10489665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300018081\|Ga0184625_10241273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	947	Open in IMG/M
3300018081\|Ga0184625_10633217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	520	Open in IMG/M
3300018468\|Ga0066662_10510126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1098	Open in IMG/M
3300018468\|Ga0066662_11035639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	815	Open in IMG/M
3300020580\|Ga0210403_10010694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7461	Open in IMG/M
3300021088\|Ga0210404_10811120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300021178\|Ga0210408_11163668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300021560\|Ga0126371_10207671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2057	Open in IMG/M
3300021560\|Ga0126371_13821624	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300024330\|Ga0137417_1470067	All Organisms → cellular organisms → Bacteria	5839	Open in IMG/M
3300025899\|Ga0207642_10841923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300025910\|Ga0207684_10699992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	861	Open in IMG/M
3300025939\|Ga0207665_10127780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1801	Open in IMG/M
3300026041\|Ga0207639_10687871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	948	Open in IMG/M
3300026490\|Ga0257153_1035891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1023	Open in IMG/M
3300026540\|Ga0209376_1058226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2171	Open in IMG/M
3300027909\|Ga0209382_11357329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300028708\|Ga0307295_10030418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1353	Open in IMG/M
3300028713\|Ga0307303_10162185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	541	Open in IMG/M
3300028787\|Ga0307323_10094348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1072	Open in IMG/M
3300031232\|Ga0302323_101424816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300031572\|Ga0318515_10004513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5713	Open in IMG/M
3300031572\|Ga0318515_10277654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300031679\|Ga0318561_10123628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1376	Open in IMG/M
3300031681\|Ga0318572_10084580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1767	Open in IMG/M
3300031708\|Ga0310686_118058720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300031716\|Ga0310813_10217319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1576	Open in IMG/M
3300031719\|Ga0306917_10244688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1372	Open in IMG/M
3300031719\|Ga0306917_10310083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1220	Open in IMG/M
3300031748\|Ga0318492_10173291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1095	Open in IMG/M
3300031768\|Ga0318509_10198680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1115	Open in IMG/M
3300031780\|Ga0318508_1178564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	606	Open in IMG/M
3300031782\|Ga0318552_10063585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1772	Open in IMG/M
3300031796\|Ga0318576_10018418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2732	Open in IMG/M
3300031798\|Ga0318523_10021302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2827	Open in IMG/M
3300031831\|Ga0318564_10390416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M
3300031835\|Ga0318517_10006180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4041	Open in IMG/M
3300031890\|Ga0306925_10191802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2202	Open in IMG/M
3300031896\|Ga0318551_10087864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1637	Open in IMG/M
3300031912\|Ga0306921_10681842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1182	Open in IMG/M
3300031945\|Ga0310913_11179248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300032035\|Ga0310911_10581703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	649	Open in IMG/M
3300032054\|Ga0318570_10125811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1135	Open in IMG/M
3300032060\|Ga0318505_10156614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1057	Open in IMG/M
3300032063\|Ga0318504_10243106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	846	Open in IMG/M
3300032180\|Ga0307471_100876291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1065	Open in IMG/M
3300032805\|Ga0335078_10291641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2199	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.52%
Host-Associated	Host-Associated	10.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.81%
Plants	Host-Associated → Plants	10.48%
Aquatic	Environmental → Aquatic	5.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.67%
Sediment	Environmental → Aquatic → Sediment	4.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.86%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.95%
Peat	Environmental → Terrestrial → Peat	0.95%
Roots	Host-Associated → Plants → Roots	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.33%
Loam	Environmental → Terrestrial → Soil → Loam	7.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.90%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.95%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.90%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.95%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.95%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.95%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.95%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.95%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000650	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A1	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014307	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D1	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095728

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2222046474	2209111022	Grass Soil	MLDRAVELYEKFMDMGLGEKDGAAMVDVIGALPRRKA
ICCgaii200_04325932	2228664021	Soil	LDRAIELYDKFMDMGLGEKDVAAMVDVIAALPRSKPAR
AF_2010_repII_A1DRAFT_101013031	3300000597	Forest Soil	SVGVGTPMLDRAVELYDKFMEMGFGEKDVAAMVDVIGALPPAKDKR*
AF_2010_repII_A1DRAFT_101262721	3300000597	Forest Soil	LDRAVELYDKFMAMGFGEKDVAAMVDVIGALPRAKT*
AP72_2010_repI_A1DRAFT_10138261	3300000650	Forest Soil	VTTPMLDRAVELYDKFMDMGFGEXDVAAMVDVISALPRSKA*
AF_2010_repII_A10DRAFT_10366082	3300000816	Forest Soil	ADSMGVATPMLDSAVELYDKFMDMGFGEKDVAAMVDVIGALPRSKP*
AP72_2010_repI_A100DRAFT_10367332	3300000837	Forest Soil	RAVELYDKFMDMGLGEKDVAAMVDVIAALPRAKPAR*
AP72_2010_repI_A100DRAFT_10620732	3300000837	Forest Soil	RAVELYDKFMAMGLGEKDVAAMVDVIGALPRANA*
Ga0066388_1027562761	3300005332	Tropical Forest Soil	SVGVTTPMLDRAVELYDKFMDMGFGEKDVAAMVDVISALPRSKA*
Ga0066689_104889022	3300005447	Soil	DSVGVATPMLDRAVELYAKFMAMGFGEKDVAAMVDVIGALPRAKS*
Ga0070663_1021479571	3300005455	Corn Rhizosphere	TPMLDRAAELYEKFMDMGLGEKDGAAMVDVIGALPRRKA*
Ga0070697_1012715472	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VGVATPMLDRAAELYEKFMDMGLGEKDGAAMVDVIGALPRRKA*
Ga0066905_1005571411	3300005713	Tropical Forest Soil	ADSVGVTTPMLDRAVELYDKFMDMGFGEKDVAAMVDVISALPRSKA*
Ga0066903_1057175992	3300005764	Tropical Forest Soil	TPMLDRAAELYRRFIAMGLSEHDIAATMDVIASLPRPKKS*
Ga0081455_1000111826	3300005937	Tabebuia Heterophylla Rhizosphere	METVGLVLYDKFMEMGFGEKDVAAMVDVIAALPPAKGKR*
Ga0066656_109764401	3300006034	Soil	PMLDRAVELYDKFMEMGFGEKDVAAMVDVIGALPPAKGRR*
Ga0075366_107840771	3300006195	Populus Endosphere	PMLDRAAELYEKFMDMGLGEKDGAAMVDVIGALPRRKA*
Ga0066660_117081941	3300006800	Soil	TPMLDRAVELYDKLMQMGLGEHDVAVMVDVVAALPRSKSAAASQAKP*
Ga0075434_1016481822	3300006871	Populus Rhizosphere	LDRAVELYDKFMAMGLGEKDVAAMVDVIGALPHAKA*
Ga0066710_1028997292	3300009012	Grasslands Soil	SVGVATPMLDRAIELYEKFMEMGLGEKDGAAMVDVIAALPRAKT
Ga0075418_121507751	3300009100	Populus Rhizosphere	AAELYQRFIDMGFAELDGAAMVDVIGSLPRTKNT*
Ga0105247_109845421	3300009101	Switchgrass Rhizosphere	GVATPMLDRAVELYEKFMDMGFGEKDGAAMVDVIGALPRRKT*
Ga0111538_102546291	3300009156	Populus Rhizosphere	RAVELYDKFIQMGLGEQDVAAMVDVIGALPRSKARD*
Ga0126374_102067923	3300009792	Tropical Forest Soil	EFADSMGVATPVLDRAVELYDKFMDMGFGEKDVAAMVDVIGALPRSKA*
Ga0126380_115673651	3300010043	Tropical Forest Soil	VTTPMLDRAVELYDKFMDMGFGEKDVAAMVDVISALPRSKA*
Ga0126384_111692891	3300010046	Tropical Forest Soil	MLDRAVELYAKFIEMGLAEQDVAAMVDVISALPRKKS*
Ga0126370_113644301	3300010358	Tropical Forest Soil	AFADSVGVATPMLDRAVELYDKFMDMGFAEKDVAAMVDVISALPHSKA*
Ga0126370_122807841	3300010358	Tropical Forest Soil	DSVGVTTPMLDRAIELYDKFMDMGFGEKDVAAMVDVISALPRSKA*
Ga0126372_107013372	3300010360	Tropical Forest Soil	VGVATPMLDRAVELYDKFMDMGFGEKDVAAMVDVIGALPRSKA*
Ga0126377_103364223	3300010362	Tropical Forest Soil	PLLDRAVELYDKFMDMGLGEKDVAAMVDVIAALPRSKPAR*
Ga0126377_115711091	3300010362	Tropical Forest Soil	MLDRAVELYDKFMDMGFGEKDAAAMVDVIGALARSKA*
Ga0126379_132099642	3300010366	Tropical Forest Soil	EFADSMGVATPMLDRAVELYDKFMDMGFGEKDVAAMVDVIGALPRPKA*
Ga0126383_119513512	3300010398	Tropical Forest Soil	SMGVATPMLDRAVELYDKFMDMGFGEKDVAAMVDVIGALPRSKA*
Ga0126383_132504832	3300010398	Tropical Forest Soil	SMGVATPMLDRAVELYDKFMDMGFGEKDVAAMVDVIGALPRPKA*
Ga0124844_10065161	3300010868	Tropical Forest Soil	ADGLGVATPMLDRAVELYDKFMAMGFGEKDVAAMVDVIGALPRAKT*
Ga0124844_10827523	3300010868	Tropical Forest Soil	DGLGVATPMLDRAVELYDKFMAMGFGEKDVAAMVDVIGALPRAKT*
Ga0137776_18838793	3300010937	Sediment	ALLDCAAALYERFMAMGFGEYDCAAMVDVVAALPRSKR*
Ga0137364_104721591	3300012198	Vadose Zone Soil	ELYDKFMEMGLGEKDGAAMVDVIGALPRAKSPQSKS*
Ga0137399_108110001	3300012203	Vadose Zone Soil	RATELYEKFIEMGLAEQDGAAMVDVIGALPRKKN*
Ga0137362_100156208	3300012205	Vadose Zone Soil	VGVATPMLDRAVELYDKFMAMGFGEKDVAAMVDVIGALPRAKARD*
Ga0137380_100675821	3300012206	Vadose Zone Soil	TPMLDRAVELYDKFMEMDFGEKDVAAMVDVVSALPRAKA*
Ga0137381_111108541	3300012207	Vadose Zone Soil	PMLDRAVELYDKFMAMGLGEKDVAAMVDVIGALPRAKA*
Ga0137361_115208802	3300012362	Vadose Zone Soil	LDRAVELYDKFMDMGFGEKDVAAMVDVISALPRSKA*
Ga0164303_114712891	3300012957	Soil	RAIELYAKFMDMGLGEKDVAAMVDVIAALPRSKPAR*
Ga0164305_104411502	3300012989	Soil	PMLDRAVELYEKFMDMGFGEKDGAAMVDVIGALPRRKT*
Ga0157375_118576391	3300013308	Miscanthus Rhizosphere	MLDRAAELYEKFMDMGLGENDGAAMVDVIGALPRRKA*
Ga0075304_10323261	3300014307	Natural And Restored Wetlands	LLDRATELYAKFIEMGFAELDGAAMVDVIAALPRAKKS*
Ga0173480_109056982	3300015200	Soil	ATPMLDRAAELYEKFMDMGLGEKDGAAMVDVIGALPRRKA*
Ga0182036_105065901	3300016270	Soil	RMLDRADDLYEKFVQMGVAEEDVAAMVDVIDALPRAKG
Ga0182041_106389911	3300016294	Soil	SMGIATPMLDRAVELYDKLMQIGLGENDVAAMVDVVGALPRTKP
Ga0182041_117301492	3300016294	Soil	LDTAVELYDKFMDMGLGEKDVAAMVDVIGALPRSKS
Ga0182035_106980222	3300016341	Soil	DRAIELYDKFMDMGFGEKDVAAMVDVISALPRAKA
Ga0182035_109962102	3300016341	Soil	MIGDFADSVGVGTPMLDRAVELFDKFMEMGFGEKDVAAMVDVIGAL
Ga0182035_118632102	3300016341	Soil	VATPMLDRAVELYDKFMDMGFGEKDVAAMVDVIGALPRAKA
Ga0182032_110709972	3300016357	Soil	LDRAVELYDKFMDMGLGEKDVAAMVDVIGALPRSKA
Ga0184623_105080202	3300018056	Groundwater Sediment	AASVGVATPMLDRAIELYERAMTMGIAEQDIAAMVDVIAAVPRAKP
Ga0184618_104125594	3300018071	Groundwater Sediment	ISDFADSIGVATPMLDRATELYDKFMEMDFGEKDVAAMVDVIGALPRKKS
Ga0184624_104896651	3300018073	Groundwater Sediment	TPMLDRAVELYEKFMDMGLGEKDGAAMVDVIGALPRRKT
Ga0184625_102412731	3300018081	Groundwater Sediment	ATPMLDRAVELYEKFMDMGLGEKDGAAMVDVIGALPRRKA
Ga0184625_106332171	3300018081	Groundwater Sediment	VGVATPMLDRAVELYDKAIEMGLAEQDVAVMVDVIGALPPRKA
Ga0066662_105101262	3300018468	Grasslands Soil	ATPLLDRAVELYDKFMDMGFGEKDAAAMVDVIAALPSSKPAR
Ga0066662_110356392	3300018468	Grasslands Soil	ATPMLDRAIELYEKFMEMGLGEKDGAAMVDVIAALPRAKT
Ga0210403_100106941	3300020580	Soil	VGVATPMLDRAAGLYDKFMDMGFAELDVAAMVDTVAALPRSKS
Ga0210404_108111201	3300021088	Soil	PMLDRAVELYDKFMHMGFGEKDAAAMVDVIGALARPKA
Ga0210408_111636681	3300021178	Soil	ATPMLDRAAGLYDKFMDMGFAELDVAAMVDTVAALPRSKS
Ga0126371_102076712	3300021560	Tropical Forest Soil	MLDRAVELYDKFMEMGFGEKDVAAMVDVIGALPPAKDKR
Ga0126371_138216241	3300021560	Tropical Forest Soil	DTAIELYDKFMDMGFGEKDVAAMVDVIGALPRSKS
Ga0137417_147006711	3300024330	Vadose Zone Soil	MRGVATPMLDRAVGSTTSSWRLGFGEKDVAAMVDVIGALPRAKARD
Ga0207642_108419231	3300025899	Miscanthus Rhizosphere	GVATPMLDRAAELYEKFMDMGLGEKDGAAMVDVIGALPRRKA
Ga0207684_106999921	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ADSVGVATPMLDRAVELYDKFMAMGFGEKDVAAMVDVIGALPRAKARD
Ga0207665_101277801	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	ATPMLDRAAELYEKFMDMGLGEKDGAAMVDVIGALPRRKA
Ga0207639_106878711	3300026041	Corn Rhizosphere	VATPMLDRAAELYEKFMDMGLGEKDGAAMVDVIGALPRRKA
Ga0257153_10358911	3300026490	Soil	LDRAVELYDKFMAMGFGEKDVAAMVDVIGALPRAKARD
Ga0209376_10582263	3300026540	Soil	TPMLDRAVELYDKFMAMGLGEKDVAAMVDVIGALPRAKA
Ga0209382_113573291	3300027909	Populus Rhizosphere	TPLLDRAAELYQRFIDMGFAELDGAAMVDVIGSLPRTKNT
Ga0307295_100304183	3300028708	Soil	PMLDRAVELYEKFMDMGLGEKDGAAMVDVIGALPRRKA
Ga0307303_101621852	3300028713	Soil	DSVGVATPMLDRAVELYEKFMDMGLGEKDGAAMVDVIGALPRRKA
Ga0307323_100943481	3300028787	Soil	PLLDRAIELYDKFMDMGLGEKDVAAMVDVIAALPRSKPAR
Ga0302323_1014248161	3300031232	Fen	LLDRATELYAKFIEMGFAEKDGAAMVDVITALPRAKKN
Ga0318515_100045136	3300031572	Soil	GEFAASVGVATPMLDRAVELYDKFMAMGFGEKDVAAMVDVIDALPRSKA
Ga0318515_102776542	3300031572	Soil	VEVATPMLDRAVELYDKFMGMGFGEKDVAAMVDVIGALPRSKA
Ga0318561_101236281	3300031679	Soil	MLDRAVELYDKFMAMGFGEKDVAAMVDVIGALPRSKA
Ga0318572_100845801	3300031681	Soil	SVGVTTPMLDRAIELYDKFMDMGFGEKDVAAMVDVISALPRAKA
Ga0310686_1180587202	3300031708	Soil	AGVATPMLDCAAGLYQRFVDMGYGDFDVAKMVDVIGALPRRK
Ga0310813_102173191	3300031716	Soil	SVGVATPMLDRAVELYEKFMDMGFGEKDGAAMVDVIGALPRRKT
Ga0306917_102446883	3300031719	Soil	LDRAVELYDKFMDMGFGEKDVAAMVDVIGALPRSKA
Ga0306917_103100833	3300031719	Soil	DSMGVATPMLDRAVELYDKFMDMGFGEKDVAAMIDVIGALPRAKA
Ga0318492_101732912	3300031748	Soil	VDVATPMLDRAVELYDKFMGMGFGEKDVAAMVDVIGALPRSKA
Ga0318509_101986802	3300031768	Soil	SVGVGTPMLDRAVELYDKFMEMGFGEKDVAAMVDVIGALPPAKGKR
Ga0318508_11785641	3300031780	Soil	GVATPMLDRAVELYDKFMDMGLGEKDVAAMVDVIGALPRSKA
Ga0318552_100635853	3300031782	Soil	ADSVGVTTPMLDRAIELYDKFMDMGFGEKDVAAMVDVISALPRAKA
Ga0318576_100184181	3300031796	Soil	THGHELVVELDRAVELYDKFMAMGFGEKDVAAMVDVIGALPRSKA
Ga0318523_100213021	3300031798	Soil	DRAVELYDKFMAMGFGEKDVAAMVDVIGALPRSKA
Ga0318564_103904161	3300031831	Soil	RMPNWVELYDKFMDMGLGEKDVAAMVDVIGALPRSKS
Ga0318517_100061805	3300031835	Soil	ADSVGVATPMLDRAVELYDKFMDMGFGEKDVAATVDVISALPRAKA
Ga0306925_101918023	3300031890	Soil	DGVGVATPMLDRAVELYDKFMDMGFGEKDAAAMVDVIGALARSKA
Ga0318551_100878641	3300031896	Soil	GVATPVLDTAVELYDKFMDMGLGEKDVAAMVDVIGALPRSKS
Ga0306921_106818423	3300031912	Soil	GAFADSVGVATPMLDRAIELYDKFMDMGFGEKDVAAMVDVISALPRAKA
Ga0310913_111792482	3300031945	Soil	DRAVELYDKFMDMGLGEKDAAAMVDVIGALARSKA
Ga0310911_105817031	3300032035	Soil	EFADGVGVATPMLDRAVELYDKFMDMGFGEKDAAAMVDVIGALARSKA
Ga0318570_101258112	3300032054	Soil	FADSVGVNTPMLDRAIELYDKFMDMGFGEKDVAAMVDVISALPRAKA
Ga0318505_101566141	3300032060	Soil	SMGVATPMLDRAVELYDKFMDMGFGEKDVAAMVDVIGALPRAKA
Ga0318504_102431061	3300032063	Soil	LDRAVELYDKFMDMGLGEKDAAAMVDVIGALARSKA
Ga0307471_1008762912	3300032180	Hardwood Forest Soil	DSVGVATPMLDRAVELYDKFMAMGLGEQDVAAMVDTIAALPRRKS
Ga0335078_102916414	3300032805	Soil	DCAVGLYDRFMAMGFGGDDVARMVDVIGALPRAKT

Hidden Markov Model


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