Metagenome Family F095719

Basic Information
Family ID	F095719
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	48 residues
Representative Sequence	MRNAVLGLICAAALALALSDIAIFGIALWKIELAIVGALLFVTAGKKT
Number of Associated Samples	84
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.10 %
% of genes near scaffold ends (potentially truncated)	39.05 %
% of genes from short scaffolds (< 2000 bps)	88.57 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Bacteria (80.952 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (18.095 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.048 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.95% β-sheet: 0.00% Coil/Unstructured: 46.05%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00005	ABC_tran	39.05
PF00083	Sugar_tr	29.52
PF03544	TonB_C	7.62
PF13620	CarboxypepD_reg	6.67
PF07690	MFS_1	6.67
PF01061	ABC2_membrane	1.90
PF03965	Penicillinase_R	0.95
PF00117	GATase	0.95
PF01979	Amidohydro_1	0.95
PF03352	Adenine_glyco	0.95
PF12706	Lactamase_B_2	0.95
PF00144	Beta-lactamase	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	7.62
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.95
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.95
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.95
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	0.95
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.95 %
Unclassified	root	N/A	19.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.95 %
Unclassified	root	N/A	19.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.95 %
Unclassified	root	N/A	19.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.05 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.05 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.81 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.90 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.90 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.05 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	3.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.90 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.05 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	2.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.90 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.05 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	2.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.90 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.05 %
Zavarzinella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella	2.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.90 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.05 %
Zavarzinella formosa	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	2.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.90 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_10355466	Not Available	791	Open in IMG/M
3300000891\|JGI10214J12806_11074234	Not Available	692	Open in IMG/M
3300000891\|JGI10214J12806_11275627	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300000953\|JGI11615J12901_11556764	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300001431\|F14TB_104572230	Not Available	621	Open in IMG/M
3300003996\|Ga0055467_10046905	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300004480\|Ga0062592_100260799	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300005093\|Ga0062594_102300492	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005294\|Ga0065705_10030474	All Organisms → cellular organisms → Bacteria → Acidobacteria	1330	Open in IMG/M
3300005294\|Ga0065705_11071687	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005295\|Ga0065707_10087131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5137	Open in IMG/M
3300005330\|Ga0070690_100451071	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300005331\|Ga0070670_101030219	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300005336\|Ga0070680_100074584	All Organisms → cellular organisms → Bacteria	2792	Open in IMG/M
3300005336\|Ga0070680_101009153	Not Available	719	Open in IMG/M
3300005353\|Ga0070669_101130723	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005440\|Ga0070705_100509490	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300005441\|Ga0070700_101644984	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005455\|Ga0070663_102170079	Not Available	501	Open in IMG/M
3300005458\|Ga0070681_10573645	Not Available	1042	Open in IMG/M
3300005546\|Ga0070696_100880137	Not Available	742	Open in IMG/M
3300005577\|Ga0068857_101876024	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005578\|Ga0068854_101117605	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300005615\|Ga0070702_100560338	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005615\|Ga0070702_100936271	Not Available	681	Open in IMG/M
3300005719\|Ga0068861_101512725	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300006196\|Ga0075422_10099369	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300006844\|Ga0075428_100477113	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300006844\|Ga0075428_100503078	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300006844\|Ga0075428_101175873	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300006844\|Ga0075428_101953360	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300006845\|Ga0075421_100437564	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300006845\|Ga0075421_100671171	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300006865\|Ga0073934_10000068	All Organisms → cellular organisms → Bacteria	294972	Open in IMG/M
3300006876\|Ga0079217_10096032	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300006881\|Ga0068865_100883959	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300006894\|Ga0079215_11174391	Not Available	582	Open in IMG/M
3300007004\|Ga0079218_10068933	All Organisms → cellular organisms → Bacteria	2291	Open in IMG/M
3300009094\|Ga0111539_10000056	All Organisms → cellular organisms → Bacteria	114878	Open in IMG/M
3300009100\|Ga0075418_10043191	All Organisms → cellular organisms → Bacteria	4859	Open in IMG/M
3300009100\|Ga0075418_10572802	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300009147\|Ga0114129_10805513	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300009147\|Ga0114129_12749245	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300009156\|Ga0111538_11513368	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300010040\|Ga0126308_10007597	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	5266	Open in IMG/M
3300010047\|Ga0126382_10371687	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	1104	Open in IMG/M
3300010397\|Ga0134124_11044101	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300011427\|Ga0137448_1141228	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300011440\|Ga0137433_1202215	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300011445\|Ga0137427_10227205	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300012901\|Ga0157288_10107213	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300014326\|Ga0157380_10747759	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300014326\|Ga0157380_11229296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300015374\|Ga0132255_105212507	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300022880\|Ga0247792_1107861	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300023102\|Ga0247754_1111717	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300025310\|Ga0209172_10000072	All Organisms → cellular organisms → Bacteria → Acidobacteria	295037	Open in IMG/M
3300025315\|Ga0207697_10165842	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300025559\|Ga0210087_1034531	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300025901\|Ga0207688_10874480	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300025903\|Ga0207680_10295809	All Organisms → cellular organisms → Bacteria → Acidobacteria	1127	Open in IMG/M
3300025903\|Ga0207680_10456251	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300025917\|Ga0207660_10223175	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300025918\|Ga0207662_10243080	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300025921\|Ga0207652_10756338	Not Available	865	Open in IMG/M
3300025923\|Ga0207681_11494275	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300025930\|Ga0207701_10335346	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300025933\|Ga0207706_10300319	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300025933\|Ga0207706_11587322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300025934\|Ga0207686_11336887	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300025938\|Ga0207704_10623275	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300025986\|Ga0207658_11952464	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300026118\|Ga0207675_100770058	Not Available	974	Open in IMG/M
3300027252\|Ga0209973_1035933	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300027378\|Ga0209981_1072286	Not Available	533	Open in IMG/M
3300027424\|Ga0209984_1016239	Not Available	993	Open in IMG/M
3300027639\|Ga0209387_1073095	Not Available	796	Open in IMG/M
3300027665\|Ga0209983_1170248	Not Available	500	Open in IMG/M
3300027880\|Ga0209481_10079154	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300027886\|Ga0209486_10034433	All Organisms → cellular organisms → Bacteria	2460	Open in IMG/M
3300027907\|Ga0207428_10002483	All Organisms → cellular organisms → Bacteria	18414	Open in IMG/M
3300027909\|Ga0209382_10024324	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	7328	Open in IMG/M
3300027909\|Ga0209382_10208491	All Organisms → cellular organisms → Bacteria	2236	Open in IMG/M
3300027909\|Ga0209382_10640440	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300027909\|Ga0209382_12157035	Not Available	529	Open in IMG/M
3300028380\|Ga0268265_10976314	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300028380\|Ga0268265_11319947	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300028812\|Ga0247825_10115392	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	1825	Open in IMG/M
3300031184\|Ga0307499_10282520	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031538\|Ga0310888_10085002	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300031740\|Ga0307468_100259283	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300031740\|Ga0307468_101201919	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300031854\|Ga0310904_10100506	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300031943\|Ga0310885_10142833	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	1137	Open in IMG/M
3300031944\|Ga0310884_10095781	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300031944\|Ga0310884_10393715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300032000\|Ga0310903_10350978	Not Available	739	Open in IMG/M
3300032000\|Ga0310903_10569898	Not Available	599	Open in IMG/M
3300032003\|Ga0310897_10269020	Not Available	769	Open in IMG/M
3300032013\|Ga0310906_10568339	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300032075\|Ga0310890_10092071	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300032075\|Ga0310890_10691730	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300032144\|Ga0315910_10452761	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300032174\|Ga0307470_10583169	Not Available	833	Open in IMG/M
3300032179\|Ga0310889_10272792	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.19%
Host-Associated	Host-Associated	43.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.52%
Plants	Host-Associated → Plants	43.81%
Aquatic	Environmental → Aquatic	6.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.29%
Sediment	Environmental → Aquatic → Sediment	2.86%
Marine	Environmental → Aquatic → Marine	1.90%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.33%
Loam	Environmental → Terrestrial → Soil → Loam	12.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.86%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.90%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	12.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.86%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	18.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	12.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.86%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.90%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.95%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027252	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_103554662	3300000890	Soil	MRNVILGLICAAALALALSDLAVFGIAIWKIELAIVGMLLFVTAGRKAS*
JGI10214J12806_110742342	3300000891	Soil	PDFMRNAVLGLICAAALALALSDIAIFGIALWKIELAIVGALLFVTAGKKT*
JGI10214J12806_112756272	3300000891	Soil	MRNAVLGLICAAALAVSISGASIFGIAAWKIVLAAAGAVLFVITGKKT*
JGI11615J12901_115567642	3300000953	Soil	MRNAILGFICAATLALAFSDIAIFGIAMWKIELAVVGALVFITAGKKT*
F14TB_1045722301	3300001431	Soil	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAIVGALLFVTAGRKAP*
Ga0055467_100469052	3300003996	Natural And Restored Wetlands	MRNAALGLICAAALALALSDIAIFGIAIWKIELAIVGALVFITAAGKKT*
Ga0062592_1002607992	3300004480	Soil	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAIVGALLFVTSGKKT*
Ga0062594_1023004922	3300005093	Soil	MRNAVIGLICAAALAVSLSGASIFGIAAWKIVLAAAGAVLFVKTGKKT*
Ga0065705_100304741	3300005294	Switchgrass Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAMWKIELAIAGALLFITAGKKT*
Ga0065705_110716871	3300005294	Switchgrass Rhizosphere	MRNAVLGLICATALALALSDIAIFGIAMWKIELAIAGALLF
Ga0065707_100871312	3300005295	Switchgrass Rhizosphere	MRNAVLGLICATALALALSDIAIFGIAMWKIELAIAGALLFITAGKKT*
Ga0070690_1004510711	3300005330	Switchgrass Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAVVGALLFITAGKRT*
Ga0070670_1010302192	3300005331	Switchgrass Rhizosphere	MRNAILGLICAAALALAFSDIAIFGIAMWKIELAIVGALLFVTAGKKT*
Ga0070680_1000745843	3300005336	Corn Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAIVGALLFVTAGRKAS*
Ga0070680_1010091532	3300005336	Corn Rhizosphere	LGLICAAALALALSDLAIFGIAIWKIELAIVGMLLFVTAGRKAS*
Ga0070669_1011307232	3300005353	Switchgrass Rhizosphere	MRNAILGFVCAAALALALSDIAIFGIAIWKIELAIAGALLFVTAGKKT*
Ga0070705_1005094902	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRNVILGLICAAALALALSDLAIFGIAIWKIELAIVGMLLFVTAGRKAS*
Ga0070700_1016449841	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAVVGALLFVTSGKKT*
Ga0070663_1021700791	3300005455	Corn Rhizosphere	AVLGLICAAALALALSDIAIFGIAIWKIELAIVGALLFVTSGKKT*
Ga0070681_105736451	3300005458	Corn Rhizosphere	LGLICAAALALALSDLAVFGIAIWKIELAIVGMLLFVTAGRKAS*
Ga0070696_1008801372	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAIVGALLFVTAGKKAS*
Ga0068857_1018760242	3300005577	Corn Rhizosphere	MRNAVLGLICATALALALSDITIFGIAMWKIELAIAGALLFITAGKKT*
Ga0068854_1011176052	3300005578	Corn Rhizosphere	MRNAVLGLICAAALALALSDVAIFGIAMWKIELAIVGALLFVTAG
Ga0070702_1005603381	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRNAILGLICAAALALAFSDIAIFGIAMWKIELAIVGALLFVT
Ga0070702_1009362711	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PDFMRNAVLGLICAAALALALSDIAIFGIAIWKIELAIVGALLFVTAGRKAS*
Ga0068861_1015127252	3300005719	Switchgrass Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAMWKIELAIVGALLFVTAGKKAS*
Ga0075422_100993692	3300006196	Populus Rhizosphere	MRNAILGLICAAALALAFSDIAIFGIAMWKIELAIVGALLFITAGKKH*
Ga0075428_1004771132	3300006844	Populus Rhizosphere	MRNAALGLVCAAALALALSDITIFGIAIWKIELAIAGALLFVTAGKKT*
Ga0075428_1005030782	3300006844	Populus Rhizosphere	MRNAVLGLICAAALALALSDIAIVGIAMWKIELAIVGALLFITAGKKH*
Ga0075428_1011758732	3300006844	Populus Rhizosphere	MRNAILGLICAAALALAFSDIAIFGIAMWKIELAIV
Ga0075428_1019533602	3300006844	Populus Rhizosphere	DVPSRSLPRQQALSSDSMRNAALGLICAAALALALSDLTIFGIAVWKIELAVAGAVLFVTAGKKT*
Ga0075421_1004375642	3300006845	Populus Rhizosphere	MRNAALGLICAAALALALSDLTIFGIAVWKIELAVAGAVLFVTAGKKT*
Ga0075421_1006711712	3300006845	Populus Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAMWKIELAIVGALLFITAGKKT*
Ga0073934_10000068127	3300006865	Hot Spring Sediment	MRNAILGLICAAALALALSDITVFGIAIWKIELALAGLILYVSAGNRT*
Ga0079217_100960322	3300006876	Agricultural Soil	MRNAALGLVCAAALALALSDITIVGIAIWKIELALAGLVLFVTAGKKT*
Ga0068865_1008839592	3300006881	Miscanthus Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAVVGALLFITA
Ga0079215_111743912	3300006894	Agricultural Soil	SMRNAALGLVCAAALALALSDITIVGIAIWKIELALAGLVLFVTAGKKT*
Ga0079218_100689333	3300007004	Agricultural Soil	MRNAALGLICAGALALALSGVTVFGIAIWKIELAIAGALLFVTAGRKAS*
Ga0111539_1000005688	3300009094	Populus Rhizosphere	MRNAAIGLICAAALAIALSDFTILGIAVWKIELALAGLVLFVTAGKKT*
Ga0075418_100431912	3300009100	Populus Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAMWKIELAIVGALLFITAGKKH*
Ga0075418_105728022	3300009100	Populus Rhizosphere	MRNAALGLVCAAALALALSDITIFGIAIWKIELAIAGALLFVTAGKKP*
Ga0114129_108055132	3300009147	Populus Rhizosphere	MRNAALGLICAAALALALSDITIFGIAVWKIELAVAGAILFVTAGKKK*
Ga0114129_127492452	3300009147	Populus Rhizosphere	MRNAALGLVCAAALALALSDITIFGIAIWKIELAIAGALLFVTA
Ga0111538_115133682	3300009156	Populus Rhizosphere	MRNAILGFICAAALALAFSDISVFGIAMWKIELAIAGALLFITAGKKT*
Ga0126308_100075972	3300010040	Serpentine Soil	MRNAVLGLICAAALALALSDIALFGIAIWKIELAIVGALLFVTSGKKT*
Ga0126382_103716871	3300010047	Tropical Forest Soil	YHLRAAGSPDSMRNAAIGLICAAALALALSDLTIFGIAMWKIELAIVGALLFVTAGKKT*
Ga0134124_110441011	3300010397	Terrestrial Soil	MRNAILGLICAAALALAFSDIAIFGIAMWKIELAIVGALLFVTAGK
Ga0137448_11412282	3300011427	Soil	MRNAVLGLICAAALALAMSGFEVAGIAIWKIELAVFGALLFVTAGRKT*
Ga0137433_12022152	3300011440	Soil	MRNAVLGLICAAALALALSDIAIFGIAMWKIELAIVGALLFINAGKKA*
Ga0137427_102272052	3300011445	Soil	MRNAILGLIGAAALAVSFSGAEIYGIAAWKIVLAAAGAVLFVTAGKRAS*
Ga0157288_101072132	3300012901	Soil	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAIVGALLFVTSVKKT*
Ga0157380_107477592	3300014326	Switchgrass Rhizosphere	MRNAVLGMICAAALALALSDIAIFGIAIRKIELAVVGALLFVTSGKKT*
Ga0157380_112292962	3300014326	Switchgrass Rhizosphere	GAYHGRPSPDVMRNAVLGLICAAALALALSDIAIFGIAIWKIELAIAGALLFITAGKKT*
Ga0132255_1052125072	3300015374	Arabidopsis Rhizosphere	MRNAILGFVCAAALALALSDIAIFGIAIWKIELAIAGALLFVT
Ga0247792_11078612	3300022880	Soil	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAIVGALLFVTSGKKT
Ga0247754_11117172	3300023102	Soil	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAI
Ga0209172_10000072123	3300025310	Hot Spring Sediment	MRNAILGLICAAALALALSDITVFGIAIWKIELALAGLILYVSAGNRT
Ga0207697_101658422	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAVVGALLFITAGKRT
Ga0210087_10345311	3300025559	Natural And Restored Wetlands	MRNAALGLICAAALALALSDIAIFGIAIWKIELAIVGALVFITAAGKKT
Ga0207688_108744801	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRNAILGLICAAALALAFSDIAIFGIAMWKIELAIVGALLFVTAGKKT
Ga0207680_102958091	3300025903	Switchgrass Rhizosphere	RSPRFHMRNAVLGLICAAALALALSDIAIFGIAIWKIELAVVGALLFITAGKRT
Ga0207680_104562512	3300025903	Switchgrass Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAVVGA
Ga0207660_102231751	3300025917	Corn Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAMWKIELAIVGA
Ga0207662_102430802	3300025918	Switchgrass Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAVVGALLFVTSGKKT
Ga0207652_107563382	3300025921	Corn Rhizosphere	TRQVSPDSMRNVILGLICAAALALALSDLAIFGIAIWKIELAIVGMLLFVTAGRKAS
Ga0207681_114942752	3300025923	Switchgrass Rhizosphere	MRNAILGFVCAAALALALSDIAIFGIAIWKIELAIAGALLFVTAGKKT
Ga0207701_103353462	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAIRKIELAVVGALLFITAGKRT
Ga0207706_103003191	3300025933	Corn Rhizosphere	GSGRSPRFHMRNAVLGLICAAALALALSDIAIFGIAIWKIELAVVGALLFITAGKRT
Ga0207706_115873221	3300025933	Corn Rhizosphere	MRNVILGLICAAALALALSDLAIFGIAIWKIELAIVGMLLFVTAGRKAS
Ga0207686_113368872	3300025934	Miscanthus Rhizosphere	MRNAVLGLICAAALALALSDLAIFGIAIWKIELAIVGMLLFVTAGRKAS
Ga0207704_106232751	3300025938	Miscanthus Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAVVGALLFITAG
Ga0207658_119524641	3300025986	Switchgrass Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAVVGALLFVT
Ga0207675_1007700582	3300026118	Switchgrass Rhizosphere	VSPDFMRNAVLGLICAAALALALSDIAIFGIAMWKIELAIVGALLFVTAGKKAS
Ga0209973_10359332	3300027252	Arabidopsis Thaliana Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIALWKIELAIVGALLF
Ga0209981_10722862	3300027378	Arabidopsis Thaliana Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIALWKIELAIVGALLFVTAGKKT
Ga0209984_10162392	3300027424	Arabidopsis Thaliana Rhizosphere	MRNVILGLICAAALALALSDIAIFGIALWKIELAIVGALLFVTAGKKT
Ga0209387_10730952	3300027639	Agricultural Soil	MRNAALGLVCAAALALALSDITIVGIAIWKIELALAGLVLFVTAGKKT
Ga0209983_11702481	3300027665	Arabidopsis Thaliana Rhizosphere	TLRKRQVSPDFMRNAVLGLICAAALALALSDIAIFGIALWKIELAIVGALLFVTAGKKT
Ga0209481_100791542	3300027880	Populus Rhizosphere	MRNAVLGLICAAALALALSDIAIVGIAMWKIELAIVGALLFITAGKKH
Ga0209486_100344333	3300027886	Agricultural Soil	MRNAALGLICAGALALALSGVTVFGIAIWKIELAIAGALLFVTAGRKAS
Ga0207428_1000248317	3300027907	Populus Rhizosphere	MRNAAIGLICAAALAIALSDFTILGIAVWKIELALAGLVLFVTAGKKT
Ga0209382_100243246	3300027909	Populus Rhizosphere	MRNAALGLICAAALALALSDLTIFGIAVWKIELAVAGAVLFVTAGKKT
Ga0209382_102084912	3300027909	Populus Rhizosphere	MRNAALGLVCAAALALALSDITIFGIAIWKIELAIAGALLFVTAGKKT
Ga0209382_106404402	3300027909	Populus Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAMWKIELAIVGALLFITAGKKT
Ga0209382_121570351	3300027909	Populus Rhizosphere	RNAALGLVCAAALALALSDITIFGIAIWKIELAIAGALLFVTAGKKT
Ga0268265_109763141	3300028380	Switchgrass Rhizosphere	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAVVG
Ga0268265_113199472	3300028380	Switchgrass Rhizosphere	MRNAVIGLICAAALAVSLSGASIFGIAAWKIVLAAAGAVLFVKTGKKT
Ga0247825_101153921	3300028812	Soil	MRNAILGLIGAAALAVSFSGMEIFGIAAWKIVLAAAGAALFVTAGKKT
Ga0307499_102825202	3300031184	Soil	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAVAGALLFITAGKKT
Ga0310888_100850022	3300031538	Soil	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAIAGALLFITAGKKT
Ga0307468_1002592831	3300031740	Hardwood Forest Soil	MRNAVLGLICAAALAVSLSGASIFGIAAWKIVLAAAGAVLFVITGKKT
Ga0307468_1012019191	3300031740	Hardwood Forest Soil	MRNAVLGLICAAALAIALSDIAIFGIAIWKIELAI
Ga0310904_101005062	3300031854	Soil	MRNAVLGLICAAALAVSISGASIFGIAAWKIVLAAAGAVLFVITGKKT
Ga0310885_101428331	3300031943	Soil	QVSPVNSMRNAVLGLICAAALAVSISGASIFGIAAWKIVLAAAGAVLFVITGKKT
Ga0310884_100957812	3300031944	Soil	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAIA
Ga0310884_103937152	3300031944	Soil	GRPSPDFMRNAVLGLICAAALALALSDIAIFGIAIWKIELAIAGALLFITAGKKT
Ga0310903_103509781	3300032000	Soil	VLGLICAAALAVSISGASLFGIAAWKIVLAAAGAVLFVKTGKKT
Ga0310903_105698981	3300032000	Soil	VLGLICAAALAVSISGASIFGIAAWKIVLAAAGAVLFVITGKKT
Ga0310897_102690202	3300032003	Soil	RPSPDPMRNAILGLICAAALALAFSDIAIFGIAMWKIELAIVGALLFVTAGKKT
Ga0310906_105683392	3300032013	Soil	VNSMRNAVLGLICAAALAVSISGASIFGIAAWKIVLAAAGAVLFVITGKKT
Ga0310890_100920711	3300032075	Soil	MRNAVLGLICAAALALALSDIAIFGIAIWKIELAVVGALLFVTSGKK
Ga0310890_106917301	3300032075	Soil	VNSMRNAVLGLICAAALAVSISGASIFGIAAWKIVLAAAGAVLFVITGK
Ga0315910_104527612	3300032144	Soil	MRNAVLGLVCAAALALALSDLSIFGIAIWKIELAVVGALLFITAGKKT
Ga0307470_105831692	3300032174	Hardwood Forest Soil	TRGAGLPSDSMRNAVLGLICAAALAVSLSGASIFGIAAWKIVLAAAGAVLFVITGKKT
Ga0310889_102727921	3300032179	Soil	MRNAVLGLVCAAALALALSDIAIFGIAIWKIELAIAGALLFVTAGKKT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095719

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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