Metagenome Family F095647

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095647
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	112 residues
Representative Sequence	MLTPHFTTRDSFVDILPPAHGYSLSDVRLEIPNPTTAIFKATLNGPNGAPVWARAWLSTEAGTLAESASHQLRAGHQVTLEVILRSSESPQSAYMRIESAPLKTEHVVVLKLN
Number of Associated Samples	82
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	37.14 %
% of genes near scaffold ends (potentially truncated)	38.10 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.86

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.286 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere (11.429 % of family members)
Environment Ontology (ENVO)	Unclassified (22.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.619 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 52.48% Coil/Unstructured: 47.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.86
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.86
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SCOP family	SCOP domain	Representative PDB	TM-score
b.2.5.7: p53-like transcription factors	d1mnna_	1mnn	0.75
b.2.5.7: p53-like transcription factors	d1mnna_	1mnn	0.75
b.1.4.1: beta-Galactosidase/glucuronidase domain	d2je8a1	2je8	0.72
b.1.4.1: beta-Galactosidase/glucuronidase domain	d2je8a1	2je8	0.72
b.1.18.11: E set domains	d3ugua2	3ugu	0.71
b.1.18.11: E set domains	d3ugua2	3ugu	0.71
b.1.9.2: CBD9-like	d1i8ua_	1i8u	0.7
b.1.9.2: CBD9-like	d1i8ua_	1i8u	0.7
b.1.4.1: beta-Galactosidase/glucuronidase domain	d4cu7a2	4cu7	0.69
b.1.4.1: beta-Galactosidase/glucuronidase domain	d4cu7a2	4cu7	0.69

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF04552	Sigma54_DBD	2.86
PF11746	DUF3303	2.86
PF08818	DUF1801	1.90
PF07883	Cupin_2	1.90
PF07494	Reg_prop	0.95
PF13534	Fer4_17	0.95
PF07589	PEP-CTERM	0.95
PF04828	GFA	0.95
PF03706	LPG_synthase_TM	0.95
PF02517	Rce1-like	0.95
PF14534	DUF4440	0.95
PF00210	Ferritin	0.95
PF14026	DUF4242	0.95
PF00361	Proton_antipo_M	0.95
PF13442	Cytochrome_CBB3	0.95
PF00884	Sulfatase	0.95
PF01370	Epimerase	0.95
PF11695	DUF3291	0.95
PF08282	Hydrolase_3	0.95
PF00561	Abhydrolase_1	0.95
PF00359	PTS_EIIA_2	0.95
PF13470	PIN_3	0.95
PF01555	N6_N4_Mtase	0.95
PF01520	Amidase_3	0.95
PF00583	Acetyltransf_1	0.95
PF09190	DALR_2	0.95
PF00588	SpoU_methylase	0.95
PF04480	DUF559	0.95
PF02371	Transposase_20	0.95
PF04266	ASCH	0.95
PF02368	Big_2	0.95
PF08327	AHSA1	0.95
PF08308	PEGA	0.95
PF07110	EthD	0.95
PF00150	Cellulase	0.95
PF02223	Thymidylate_kin	0.95
PF05988	DUF899	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1508	DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog	Transcription [K]	2.86
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	1.90
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	1.90
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	1.90
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.95
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.95
COG4405	Predicted RNA-binding protein YhfF, contains PUA-like ASCH domain	General function prediction only [R]	0.95
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.95
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.95
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.95
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.95
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.95
COG3292	Periplasmic ligand-binding sensor domain	Signal transduction mechanisms [T]	0.95
COG3097	Uncharacterized conserved protein YqfB, UPF0267 family	Function unknown [S]	0.95
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.95
COG2411	Predicted RNA-binding protein, contains PUA-like ASCH domain	General function prediction only [R]	0.95
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	0.95
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.95
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.95
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.95
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.95
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	0.95
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.95
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.95
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.95
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.95
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.95
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.95
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
All Organisms	root	All Organisms	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
cellular organisms	root	All Organisms → cellular organisms	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	18.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.81 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	13.33 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	4.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.86 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.90 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	3.81 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	3.81 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.86 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.86 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.95 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.95 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.95 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3.81 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.90 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.90 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.95 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.95 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.95 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.95 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.95 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	2.86 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.90 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	1.90 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.95 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.95 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.95 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.95 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.95 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.95 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.95 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.95 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.95 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	2.86 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	1.90 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.95 %
Paludisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera	0.95 %
Acidovorax kalamii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → Acidovorax kalamii	0.95 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.95 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.95 %
Dyella japonica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella japonica	0.95 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.95 %
Zavarzinella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella	0.95 %
Xanthomonas citri group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas citri group	0.95 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.95 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1.90 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1.90 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	0.95 %
Paludisphaera soli	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera soli	0.95 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.95 %
Xanthomonas citri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas citri group → Xanthomonas citri	0.95 %
Dyella japonica A8	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella japonica → Dyella japonica A8	0.95 %
Zavarzinella formosa	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	0.95 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.95 %
Acidovorax kalamii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → Acidovorax kalamii	0.95 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.95 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.95 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01DXZYC	Not Available	513	Open in IMG/M
3300004092\|Ga0062389_100369021	Not Available	1541	Open in IMG/M
3300004480\|Ga0062592_100305330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	1207	Open in IMG/M
3300004643\|Ga0062591_100690812	Not Available	921	Open in IMG/M
3300005295\|Ga0065707_10358232	Not Available	908	Open in IMG/M
3300005332\|Ga0066388_100974199	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1416	Open in IMG/M
3300005332\|Ga0066388_102396489	Not Available	957	Open in IMG/M
3300005332\|Ga0066388_105721717	Not Available	629	Open in IMG/M
3300005468\|Ga0070707_101978088	Not Available	550	Open in IMG/M
3300005530\|Ga0070679_101135594	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005534\|Ga0070735_10884406	Not Available	525	Open in IMG/M
3300005535\|Ga0070684_101847273	Not Available	570	Open in IMG/M
3300005538\|Ga0070731_10001461	All Organisms → cellular organisms → Bacteria	24404	Open in IMG/M
3300005539\|Ga0068853_100702214	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300005563\|Ga0068855_100038749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	5661	Open in IMG/M
3300005591\|Ga0070761_10781117	Not Available	600	Open in IMG/M
3300005614\|Ga0068856_101696095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	644	Open in IMG/M
3300005764\|Ga0066903_107159081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300005841\|Ga0068863_102528609	Not Available	523	Open in IMG/M
3300006046\|Ga0066652_100457762	Not Available	1176	Open in IMG/M
3300006046\|Ga0066652_100549993	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300006046\|Ga0066652_100613807	All Organisms → cellular organisms → Bacteria → Proteobacteria	1027	Open in IMG/M
3300006237\|Ga0097621_101251843	Not Available	700	Open in IMG/M
3300006358\|Ga0068871_101914461	Not Available	564	Open in IMG/M
3300009093\|Ga0105240_12432514	Not Available	542	Open in IMG/M
3300009094\|Ga0111539_13420364	Not Available	510	Open in IMG/M
3300009098\|Ga0105245_11662445	Not Available	691	Open in IMG/M
3300009098\|Ga0105245_12378104	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300009177\|Ga0105248_12984526	Not Available	539	Open in IMG/M
3300009551\|Ga0105238_12851727	Not Available	520	Open in IMG/M
3300009665\|Ga0116135_1339691	Not Available	599	Open in IMG/M
3300010048\|Ga0126373_12052751	Not Available	634	Open in IMG/M
3300010048\|Ga0126373_13007511	Not Available	526	Open in IMG/M
3300010048\|Ga0126373_13179821	Not Available	511	Open in IMG/M
3300010358\|Ga0126370_12186529	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300010361\|Ga0126378_10145171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella japonica → Dyella japonica A8	2409	Open in IMG/M
3300010371\|Ga0134125_11676873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300010371\|Ga0134125_11748031	Not Available	676	Open in IMG/M
3300010375\|Ga0105239_13419318	Not Available	516	Open in IMG/M
3300010376\|Ga0126381_100112419	All Organisms → cellular organisms → Bacteria	3505	Open in IMG/M
3300010376\|Ga0126381_100732810	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300010376\|Ga0126381_100950550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	1238	Open in IMG/M
3300010376\|Ga0126381_104012010	Not Available	573	Open in IMG/M
3300010379\|Ga0136449_100534268	Not Available	2023	Open in IMG/M
3300010396\|Ga0134126_10967329	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera soli	955	Open in IMG/M
3300010401\|Ga0134121_10107201	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2348	Open in IMG/M
3300012929\|Ga0137404_11532655	Not Available	617	Open in IMG/M
3300012960\|Ga0164301_10514664	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	866	Open in IMG/M
3300013104\|Ga0157370_10059239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3639	Open in IMG/M
3300014168\|Ga0181534_10638734	Not Available	616	Open in IMG/M
3300014325\|Ga0163163_10368432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1493	Open in IMG/M
3300014326\|Ga0157380_13075673	Not Available	532	Open in IMG/M
3300014501\|Ga0182024_10051860	All Organisms → cellular organisms → Bacteria	6482	Open in IMG/M
3300014501\|Ga0182024_12432099	Not Available	567	Open in IMG/M
3300014969\|Ga0157376_10268798	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1601	Open in IMG/M
3300014969\|Ga0157376_11846513	Not Available	641	Open in IMG/M
3300015264\|Ga0137403_10043156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4689	Open in IMG/M
3300016445\|Ga0182038_10435685	Not Available	1106	Open in IMG/M
3300016445\|Ga0182038_11120142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300018035\|Ga0187875_10550799	Not Available	610	Open in IMG/M
3300018046\|Ga0187851_10010748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	6767	Open in IMG/M
3300020016\|Ga0193696_1132022	Not Available	627	Open in IMG/M
3300020583\|Ga0210401_10142971	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300021171\|Ga0210405_10336306	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300021181\|Ga0210388_10798528	Not Available	818	Open in IMG/M
3300021403\|Ga0210397_10186819	Not Available	1473	Open in IMG/M
3300021560\|Ga0126371_10270341	Not Available	1819	Open in IMG/M
3300021560\|Ga0126371_12570908	Not Available	617	Open in IMG/M
3300025922\|Ga0207646_11333176	Not Available	626	Open in IMG/M
3300025949\|Ga0207667_10018002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7934	Open in IMG/M
3300027330\|Ga0207777_1084631	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	550	Open in IMG/M
3300027821\|Ga0209811_10108078	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1005	Open in IMG/M
3300027853\|Ga0209274_10690216	Not Available	527	Open in IMG/M
3300027869\|Ga0209579_10019367	All Organisms → cellular organisms → Bacteria	3871	Open in IMG/M
3300027908\|Ga0209006_10646022	Not Available	870	Open in IMG/M
3300028558\|Ga0265326_10019440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas citri group → Xanthomonas citri	1952	Open in IMG/M
3300028558\|Ga0265326_10160405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	643	Open in IMG/M
3300028788\|Ga0302189_10317823	Not Available	624	Open in IMG/M
3300028800\|Ga0265338_10000460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	72716	Open in IMG/M
3300028800\|Ga0265338_10003368	All Organisms → cellular organisms → Bacteria	22564	Open in IMG/M
3300028800\|Ga0265338_10003405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	22431	Open in IMG/M
3300028800\|Ga0265338_10169884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → Acidovorax kalamii	1674	Open in IMG/M
3300028800\|Ga0265338_10250959	Not Available	1305	Open in IMG/M
3300028800\|Ga0265338_10350668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1061	Open in IMG/M
3300028800\|Ga0265338_10696702	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	701	Open in IMG/M
3300028800\|Ga0265338_10900335	Not Available	602	Open in IMG/M
3300029922\|Ga0311363_10065332	All Organisms → cellular organisms → Bacteria	5397	Open in IMG/M
3300029952\|Ga0311346_10210038	All Organisms → cellular organisms → Bacteria	2157	Open in IMG/M
3300029954\|Ga0311331_10743033	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	896	Open in IMG/M
3300029957\|Ga0265324_10216432	Not Available	650	Open in IMG/M
3300029982\|Ga0302277_1090983	Not Available	1350	Open in IMG/M
3300030045\|Ga0302282_1367960	Not Available	510	Open in IMG/M
3300030503\|Ga0311370_10855572	Not Available	1038	Open in IMG/M
3300031236\|Ga0302324_101577579	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300031240\|Ga0265320_10000947	All Organisms → cellular organisms → Bacteria	21645	Open in IMG/M
3300031261\|Ga0302140_10053409	All Organisms → cellular organisms → Bacteria	4395	Open in IMG/M
3300031525\|Ga0302326_13125716	Not Available	561	Open in IMG/M
3300031573\|Ga0310915_11101456	Not Available	552	Open in IMG/M
3300031890\|Ga0306925_10748312	Not Available	1019	Open in IMG/M
3300031902\|Ga0302322_102005270	Not Available	711	Open in IMG/M
3300031910\|Ga0306923_11870223	Not Available	614	Open in IMG/M
3300031912\|Ga0306921_11581636	Not Available	713	Open in IMG/M
3300032782\|Ga0335082_11092053	Not Available	664	Open in IMG/M
3300032805\|Ga0335078_10000072	All Organisms → cellular organisms → Bacteria	189427	Open in IMG/M
3300033289\|Ga0310914_11326338	Not Available	622	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.48%
Host-Associated	Host-Associated	29.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.71%
Plants	Host-Associated → Plants	29.52%
Aquatic	Environmental → Aquatic	4.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.90%
Peat	Environmental → Terrestrial → Peat	10.48%
Freshwater	Environmental → Aquatic → Freshwater	4.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.76%
Roots	Host-Associated → Plants → Roots	2.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Loam	Environmental → Terrestrial → Soil → Loam	11.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	11.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.86%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.95%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.95%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_00018030	2170459009	Grass Soil	MLTPTSKTIDSFVNILSSSQGYSLSDVRLDVLKPATAIFRATLNGPEGAPVWARAWFSTEAGTLAETASPTLTAGDQVTLEVTLRSAESPQNAYMRIESAPFKTEHVVA
Ga0062389_1003690213	3300004092	Bog Forest Soil	VRPITPTSNVLDSFVTMLPPSRGYSLSHVQLEIPDPTTAIFKATLKGPEGAPVWARAWLSTEAGTLAETASPRLTAGDHITLEVTLRGAESPQNAYMRIKSAPLKTEHLVVLKLA*
Ga0062592_1003053302	3300004480	Soil	MLTPTVETQDSFVEILRPVHGYSLSHVRLDIPNPTTAIFKARLNGPEGSPVWARAWLSTEEETLAESASPQMKAGDEVTLEVTLQSNESPHSAYMRIESAPLHTEHVVALKLEG*
Ga0062591_1006908121	3300004643	Soil	YSLSEVRLQIPDSTTAIFTAKLMGPNSAPVWARAWLSTEAGTLAETASTQLTARDHVTLSVVLQTAESPQSAYMRIESAPLKTEHVVGLKLT*
Ga0065707_103582322	3300005295	Switchgrass Rhizosphere	MLTPTSNSVDSFVDILRPSQGYSLSDVRLDIPNPTTAIFKAKLNGPQGTPVWARAWLSTEAGTLAEMASPRLMAGDHVTLEVTLRSAESPQNAYMRIESAPLKTEHVVVLRLT*
Ga0066388_1009741992	3300005332	Tropical Forest Soil	MLTPLPNNIDSFVDIRRSSQDYALSNVRLEIPDPRTAIFRARLNGPEGAAVWARAWLSNDEGTLAETASPQLRAGDDVTLEVTLDGTETPQNAYMRIESAPLNTEHVVALELS*
Ga0066388_1023964891	3300005332	Tropical Forest Soil	MLTPTSQSLDSFVEILRSAHGYWLSDVRLDVPNSRVAIFRAKVNGPEGRAVWARAWLATEAGTLAESASPQLQAGDEVKLEVTLKGPESPQNAYMRIESAPLKTEHIVLLKLT*
Ga0066388_1057217171	3300005332	Tropical Forest Soil	VSDSQNSFVDLLRPGHGYFLSDVRLDLPNPATAIFKARLNGPAGKPVWARAWLSTEDGTLAESASDQLNSGDEVVLELAVPSAPRAQYAYMRIESAPLNTEHVVM
Ga0070707_1019780882	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VLRATSASHIPNNFMLTPTFNSADSFMDILRPSQGYSLSDVRLDIPNPTTAIFKAKLNGPKDTPVWVRAWLSTEAGTLAESPSPRLMAGDQVTLEVTLRSPEPPEYAYMRIESAPLNTEHVVGLKLA*
Ga0070679_1011355942	3300005530	Corn Rhizosphere	MLTPAFGTGPFVDLLRPANGYFLSDVRLEIPNATTAIFKAKLNGPNNRPVWARAWLSTEAGTLAEAASPQMKAGDEVTLEVRLQGAESPRFAYLRIESMPLKTEHVVVLKLA*
Ga0070735_108844061	3300005534	Surface Soil	MLKAVSKRDIQGPSHGYSLGNLQFEMPDPTTAIFKARLNGPPDQPVWVRAWLSTEAGTLAETASPQLKAGEKVTLQTSESPQYGYMRIESAPLNTEHVVALRLA*
Ga0070684_1018472731	3300005535	Corn Rhizosphere	PGFWIKIYAALVFNEHSFMDLLPPAHGYFVSDVQFDFTNPTTAIFKAKLNGPEGKPVWARAGLSTEVGTLAEVASPQMTAGDEVMLEVRLQTAEPPQFAYMRIESAPLQTEHVVMLKLG*
Ga0070731_100014618	3300005538	Surface Soil	MIPKTHNSFADILPSSRGYSLSDVRLDIQNPTTAVFKAKLNGPAGSPVWARAWLSTEAGTLAESASLQLNAGDEVTLEVILRSPEQPQYAYMRIESAPLKTEHVVVLKFT*
Ga0068853_1007022141	3300005539	Corn Rhizosphere	VLFYDHGEQFKFIHRRRAFLDALSSAHGYSLSEVRFELTNPTTAIFKAKLNAPEGKPVWARAWLSTEEETLAEAASPQMTAGDEVTLEVKLKTEEEPQAAYMRIES
Ga0068855_1000387491	3300005563	Corn Rhizosphere	MDLLPPAHGYFVSDVQFDFTNPTTAIFKAKLNGPEGKPVWARAGLSTEVGTLAEVASPQMTAGDEVMLEVRLQTAEPPQFAYMRIESAPLQTEHVVMLKLG*
Ga0070761_107811172	3300005591	Soil	VLTPNSTTLDSFVDILPPSQGYSLSGVRLEVPNLTKAIFRAKLNGPDAAPVSARAWLSADAGTLAESASDQLIAGDQVTLEVELQNSESPQSAYMRIESAPLKTEHVVVLKLS*
Ga0068856_1016960951	3300005614	Corn Rhizosphere	MLVPSSNHRDSFRDILGPSPEYSLGDVRLNVPDSQTAIFKATLNGPAGAAVWARAWLSTEAGTLAEGVSPQMIAGDCVTLEMTLRSGELPQTAYMRIESAPLKTEHVVALKLT*
Ga0066903_1071590812	3300005764	Tropical Forest Soil	PSHGYSLSDVRLDIPNSTTAIFKATLNGPKGKPVWARAWLSSETETLAESASPRLMAGDEVTLQVVLRGPELPQHAYMRIESAPLNTEHVVGLKLT*
Ga0068863_1025286091	3300005841	Switchgrass Rhizosphere	SILPPSRGYSLSDVRLEVPNPVTAIFKAKLIGPEGAPVWARAWLSTDAGTLAEAASHQLNAGDHATLEVVLQSPESPRSAYIRIESAPLKTEHVLCLKLS*
Ga0066652_1004577622	3300006046	Soil	MLTPTSNSVDSFVDILRPCQDYSLSEVRLEIPNPTTAIFKAKLNGPSGMPVWARAWLSTEAGTLAESASPQLMAGAHVTLEVKLQSAESPQTAYMRIESAPLKTEHVVALKLA*
Ga0066652_1005499931	3300006046	Soil	MALTPMPRLTANDYSTMLSQQNSFADIMPASQGYWLSDVRLEIAGLTSAVFKARLNGPVGKPVWARAWLSIEAGTLAEADSPQLTAGDEVTLPVTLPTSEAPQYAYMRIESAPLNTEHVVGLKLI*
Ga0066652_1006138071	3300006046	Soil	MLVPASNTLNSFVNILVPSHGYSLSEVRLEIPNPTTAIFKAKLNGPEGAPVWVRAWLSTEAGTLAEAPSDQLRAGDSVTLEVMLQSSESPQSAYMRIESAPLKTEHVVVLKLT*
Ga0097621_1012518432	3300006237	Miscanthus Rhizosphere	MLIPTSSTLNSFVDILPPSHGYSLSDVRLEIPNPTTAIFKARLNGSEGVPVWVRAWLATEAGTLAEAASHQLRAGDSVTLEVMLQSSESPQSAYMRIESAPLKTEHVVVLKLT*
Ga0068871_1019144612	3300006358	Miscanthus Rhizosphere	MLIPTSSTLNSFVDILPPSHGYSLSDVRLEIPNPTTAIFKARLNGPEGAPVRVRAWLSTEAGTLAEAASHQLRAGDSVTLEVMLQSSESPQSAYMRIESAPLKTEHVVVLKLT*
Ga0105240_124325142	3300009093	Corn Rhizosphere	HRRRAFLDALSSAHGYSLSEVRFELTNPTTAIFKAKLNAPEGKPVWARAWLSTEEETLAEAASPQMTAGDEVTLEVKLKTEEEPQAAYMRIESAPLKTEHVVMLKL*
Ga0111539_134203641	3300009094	Populus Rhizosphere	MLTPTVGTKDSFVEILRPANGYSLSHVRLDVPSATTAIFKAKLNGPEGSPVGARTWLSTEEGTLAESASPQMKAGDEVTLEVTLQSTQSPHYAYMRIESAPLHTEHV
Ga0105245_116624452	3300009098	Miscanthus Rhizosphere	VPKPTPKTNASFTDILRPSHGYFLTEVRIDVVNPTAAIFKAKLNGPDGAPVWARAWLSTEAGTLAESASRQLKAGDEVTLEVILQSGESPQHAYMRIESAPLHTEHVVGL
Ga0105245_123781041	3300009098	Miscanthus Rhizosphere	MLIPTSKPLNSFVNILPPLHGYSLSDVRLEIPNPTTAIFKARLNGPEGAPVWVRAWLSTEAGTLAEAASHQLRAGDSVTLEVMLQSSESPQSAYMRIESAPLKTEHVVVLNLT*
Ga0105248_129845261	3300009177	Switchgrass Rhizosphere	SLRIQEATVQSQPPNSVDSFVNILPPLHGYSLSDVRLEIPSPTPAIFQATLNGPEGAPVWVRAWLSTEAGTLAEAASHQLRAGDSVTLEVMLQSSESPQSAYMRIESAPLKTEHVVVLNLT*
Ga0105238_128517271	3300009551	Corn Rhizosphere	MESLAHNNKRHFRDLLSPAHGYFLSDVQLEVPNPTTAIFKASLNGPEGKPVWTRAWLSTEAGTLAEAASPEMKAGDEVVLQVVLRTAESPQFAYMRIESAPLKTEHVVVLKLA*
Ga0116135_13396912	3300009665	Peatland	MMIKSLARLGSALGTLNHTTMLTPHFTTRDSFVDILPPAHGYSLSDVRLEIPNPTTAIFKATLNGPNGAPMCARAWLSTEAGTLAESASHPLRAGHQVTLEVILRSSESPQSAYM
Ga0126373_120527511	3300010048	Tropical Forest Soil	MRASSSTNPFRDSLPPSDAYSLSSVRLEWQDATTAIFHAKLNGPPGSPVWARAWLSTEAGTLAESASPQLNSGDDVTLHVTLQTSEIPKYAHMRIESSPLNTQHVVSLKLT*
Ga0126373_130075111	3300010048	Tropical Forest Soil	MLRPDSSSLGSFVDVLRPSRGYSLSNVRLEIPNSTTAVFRAKLNGPASSPVWARAWLSTEVGTLAESASPQLKAGDEVTLEVLLQSPESPQSAYMRIESAPLKTEHVVLLRLT*
Ga0126373_131798211	3300010048	Tropical Forest Soil	LKATGFGCVSARRRPAFDPGRINLMLTPINYSKDLFVDVLRPSHGYSLTDVRLEIPNATTAIFKARLNGPESSPVWIRAWLSTEAGTLAESASPQLKAGDEAVLQVTLRNSDSPTYAYMRIESAPLQTEHVVGLKL*
Ga0126370_121865291	3300010358	Tropical Forest Soil	MPASNSTLPFRDTLPPSGAYSLTSVHLEWKDATTAIFTAKLNGPEGSPVWARAWLSTEAGTLAESASPQLKAGDEVTLEVRLHTSDSPQYAHMRIESSPLNTQHVVS
Ga0126378_101451712	3300010361	Tropical Forest Soil	MQASTSTNLFRDTLPPSGAYSLSSVHLSWQNATTAIFHAKLNGPPGSPMWARAWLSTEIGTLAESASPQLKAGDDVTLHVTLHTPETPQYAHMRIESSPLNTQHVVSLKLS*
Ga0134125_116768731	3300010371	Terrestrial Soil	MQPSSCSFIELLHPTHSYFLSDVRLEIPNPTTAIFKAKLNAPEGKPVWARAWLSTEEETLAEAASPQMTAGDEVTLEVKLKTEEEPQAAYMRIESAPLKTEHVVMLKL*
Ga0134125_117480311	3300010371	Terrestrial Soil	MKMQSPKSGEKQSFSDMLRAAHGYSLSEVQLEIPNPTTAIFKARLNGPEGKPVWVRAWLSTEDGTLAEAASPEMKAGDEVVLEVVLKTAESPQFAYIRIESAPLKTEHIVVLKLA*
Ga0105239_134193181	3300010375	Corn Rhizosphere	SECWVLFYDHGEQFKFIHRRRAFLDALSSAHGYSLSEVRFELTNPTTAIFKAKLNAPEGKPVWARAWLSTEEETLAEAASPQMTAGDEVTLEVKLKTEEEPQAAYMRIESAPLKTEHVVMLKL*
Ga0126381_1001124194	3300010376	Tropical Forest Soil	MQASNSSHPFRDALPPSGAYSLTSVHIEWKDATTAIFTAKLNGPEGSPVWARAWLSNEAGTLAESASPQLKAGDEVTLEVRLHTSDSPQYAHMRIESSPLNTQHVVSLKLT*
Ga0126381_1007328102	3300010376	Tropical Forest Soil	MSNSENSFEDILPAAHGYWLSQARLDMANPMLAIFTARLNGPDGMPVWARAWLSTEAGTVAESASSQLKAGDEITLEVALSGAISPQFAYLRIESSPLHTEHVIVRKLA*
Ga0126381_1009505501	3300010376	Tropical Forest Soil	QKTQRSASMQASTSTNLFRDTLPPSGAYSLSSVHLSWQNATTAIFHAKLNGPPGSPMWARAWLSTEIGTLAESASPQLKAGDDVTLHVTLHTPETPQYAHMRIESSPLNTQHVVSLKLS*
Ga0126381_1040120101	3300010376	Tropical Forest Soil	MQSPNQKDGFIDILRPSGSYSLSNVRLEVLDRTTLVFKAVLNGPEGAPVWARAWLSNDVGTLAESASPQLKTGDEITLQVRLYRPEEPQYAYMRIESSPLNTEHVVALKLSN
Ga0136449_1005342681	3300010379	Peatlands Soil	WTLGHIAVLIPNSKALDSFVDILPPSRGYSLSDVRLEIPNPTTAIFKARLIGPDGAPVWARAWLSTEAGALAESASRQLRAGDHVTIEVMLRGSESPQSAYMRIESAPLNAEHVVGLKFT
Ga0134126_109673292	3300010396	Terrestrial Soil	MLTLGHRDSFADMLRPSRGYSLSHIRLEIPNPTTAIFKATLNGLEGKPVWARAWLSTEAGTLAESASPQMKAGEEVTLEVTLKTSESPQYAYMRIESSPLKTEHVVALKLG*
Ga0134121_101072011	3300010401	Terrestrial Soil	ISSNFMLTPTSNSLDSFVDILPPCQGYSLSDVRLDIPNPSTAIFKAKLNGPEGMPVWVRAWLSTEAGTLAETASPRLMAGDHVTLEVTLRSAESPQNAYMRIESAPLKTEHVVVLKLA*
Ga0137404_115326551	3300012929	Vadose Zone Soil	MLTPTSNSLNSFVNILGPSQHYSLSDVRLNIPNPTTAIFKARLNGPKNSPVWARAWLATEAGTLAEAASVQLKAGDEVTLEVKLLSAESPESAYMRIESAPLKTEHVVVLKLT*
Ga0164301_105146642	3300012960	Soil	MLTPNHQSGRSFVDILRSARGYSLGEVQLDIADSTTAIFTAKLNGPEGAPVWARAWLANDAGTLAETASSQLTAGDRVTLRVALQSAVLPQTAYMRIESAPLHTEHVVALKL
Ga0157370_100592393	3300013104	Corn Rhizosphere	MLRPSRGYSLSHIRLEIPNPTTAIFKATLNGLEGKPVWARAWLSTEAGTLAESASPQMKAGEEVTLEVTLKTSESPQYAYMRIESSPLKTEHVVALKLG*
Ga0181534_106387342	3300014168	Bog	MLTPTAKTLDAFVTIMPSANGYSLSDVRFDVPDPVTAIFTAELNGPVGAPVWARAWLATESGTLAEAASPQLRAGEQVTLEVKLLSSESPQSAYLRIESAPLKTEQVVVLRLG*
Ga0163163_103684324	3300014325	Switchgrass Rhizosphere	MLTPTSNSVDSFVDLLRPSQGYSLSDVRLDIPNPMTAIFKAKLNGPKCTPVWVRAWLSTEAGTLAETASPQLMAGDQVTLEVTLRSAESPQNAYMRIESAPLKTEHVVGLKLA*
Ga0157380_130756731	3300014326	Switchgrass Rhizosphere	MLTPTSNSVDSFVDILRPSKGYSLSEVRLDIPNSMTAIFNAKLNGPKGTPVWVRAWLSTEAGTLAETASPRLMAGDHVTLEVTLRSAESPQNAYMRIESAPLKTEHV
Ga0182024_100518603	3300014501	Permafrost	MSSSENSFEDILPPSRGYSLSQVRLEMASPVLAIFKAKLNGPEGIAVWARAWLSTEAGTLAESASPQLKAGDEVTLEVALRGAITPQFAYMRIESAPLHTEHVVVRKLA*
Ga0182024_124320991	3300014501	Permafrost	MLTPSSRDLDSFADSLRPSRGYSLSDVRLNIPDPITAIFKATLNGPAGAPVWARAWLSTEAGTLAEAASPPLTAGDDVTLEVIFRGPESPQYAYMRIESKPLKTEHVVVLKLA*
Ga0157376_102687985	3300014969	Miscanthus Rhizosphere	FLKRLTAMLTPTVETQDSFVEILRPVHGYSLSHVRLDIPNPTTAIFKARLNGPEGSPVWARAWLSTEEETLAESASPQMKAGDEVTLEVTLQSNESPHSAYMRIESAPLHTEHVVALKLEG*
Ga0157376_118465132	3300014969	Miscanthus Rhizosphere	VNLGTHNAFVDLVRSSHGYSLSDVRLQITNPTTAIFKATLNGLEGKPVWARAWLSTEAGTLAESASEQMKAGDEVTLEVILRNAESPKYAYMRIESAPLDTEHIVALELE*
Ga0137403_100431566	3300015264	Vadose Zone Soil	MLTPTSNSLNSFVNILGPSQHYSLSDVRLNIPNPTTAIFKAKLNGPKSAPVWARAWLSTEAGTLAETSSPQLMAGDQVTLEVTLRSAESPESAYMRIESAPLKTENVVVLKLT*
Ga0182038_104356852	3300016445	Soil	MLTPFSRSRDSFVDFLRPSHGYSLSDVRLDIPNSTTAIFKARLNGPEGKPVWVRAWLSTEEGTLAESASPQLMSGDEVTLQVVLQSPVSPQCAYMRIESAPLDTEHVVGLKLA
Ga0182038_111201422	3300016445	Soil	MLTPTSSTQQSFADILPPSRGYFLSNVQLDIPNPSIAVFKAKLNGPEGKSVWARAWLSSETGTLAESASPELKSGDEVTLEVTLRTRESPQYAYMRIESAPLHTEHVVA
Ga0187875_105507991	3300018035	Peatland	GYSLSDVRLEVPNSKTAIFRAKLNGPDGAPVWARAWLSTEACTLAESASHQLRVGDQVTLEVKLQNSESPQSAYMRIESAPLKTEHVVVLKLS
Ga0187851_100107483	3300018046	Peatland	VLTPNAATLDSFMDILPPSQGYSLSDVRLEVPNSKTAIFRAKLNGPDGAPVWARAWLSTEACTLAESASHQLRVGDQVTLEVKLQNSESPQSAYMRIESAPLKTEHVVVLKLS
Ga0193696_11320222	3300020016	Soil	VKANNEDSFADVLPPSNSYSLSDVRLELPNPMTAIFKARLNGPNGAPVWARAWLSTEAGTLAEATSPQLLAGDQVTLEVTLRGAEVPQSAYMRIESAPLKTEHVVGLKFA
Ga0210401_101429712	3300020583	Soil	MNSSENFFQDILPPSHGYSLSQVRLDVVNPMLAIFKARLNGPEGMPVWARAWLSTEAGTLAESASPQLKAGAEVTLEVAVGGTVTPRFAYMRIESVPLQTEHVVGRRLA
Ga0210405_103363062	3300021171	Soil	MLTPTADTLDSFADILPPTPSYSLSDVRLRIPSPTTAIFKAKLNGPEGAPVWARAWLSTEAGTLAEAASPQLMAGDHVTLEVTLQSPESPQSAYMRIESAPLKTEHVIALKLT
Ga0210388_107985281	3300021181	Soil	VLTPNSTTLDSFVDILPPSQGYSLSGVRLEVPNLTKAIFRAKLNGPDAAPVSARAWLSADAGTLAESASDQLTAGDQVTLKVELQNSESPQSAYMRIES
Ga0210397_101868191	3300021403	Soil	MLTPTTNPLTAFADMLRPAHGYFLSDAQLEIPNPTTAIFKATLNGPKGAPVWARAWLSTEAGTLAEIASPQMTAGETITLEVKLRGHEAPQYAYLRIESAPLKTEHVLVLKLV
Ga0126371_102703412	3300021560	Tropical Forest Soil	MLTPTANPKDLFVDILRPSHGYSLSEVRLDIPSPTVAIFKARLNGPADKPVWARAWLSTEVGTLAESASPELRSGDEVTLEVVLRSSESPGYAYMRIESAPLNTEHVVGLKLV
Ga0126371_125709082	3300021560	Tropical Forest Soil	VDVLRPSRGYSLSNVRLEIPNSTTAIFRAKLNGPASSPVWARAWLSTEAGTLAESASPQLKAGDEVTLEVLLQSPESPQSAYIRIESAPLKTEHVVLLRLT
Ga0207646_113331762	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GCKRGASLAGSLCWVVGSASFNEHWVLRATSASHIPNNFMLTPTFNSADSFMDILRPSQGYSLSDVRLDIPNPTTAIFKAKLNGPKDTPVWVRAWLSTEAGTLAESPSPRLMAGDQVTLEVTLRSPEPPEYAYMRIESAPLNTEHVVGLKLA
Ga0207667_100180028	3300025949	Corn Rhizosphere	MDLLPPAHGYFVSDVQFDFTNPTTAIFKAKLNGPEGKPVWARAGLSTEVGTLAEVASPQMTAGDEVMLEVRLQTAEPPQFAYMRIESAPLQTEHVVMLKLG
Ga0207777_10846312	3300027330	Tropical Forest Soil	MLTPTSKTLDSFKDFLRPSHGYSLSNVRLDIPNSTTAIFKARLNGPEGKPVWARAWISNEDATLAEAASPQLMAGDEVTLEVVLQSPETTLYAYMRIESSPLNT
Ga0209811_101080782	3300027821	Surface Soil	MLTPTVETQDSFVEILRPVHGYSLSHVRLDIPNPTTAIFKARLNGPEGSPVWARAWLSTEEETLAESASPQMKAGDEVTLEVTLQSNESPHSAYMRIESAPLHTEHVVALKLEG
Ga0209274_106902161	3300027853	Soil	VLTPNSTTLDSFVDILPPSQGYSLSGVRLEVPNLTKAIFRAKLNGPDAAPVSARAWLSADAGTLAESASDQLIAGDQVTLEVELQNSESPQSAYMRIESAPLKKVPSLVNTIM
Ga0209579_100193672	3300027869	Surface Soil	MIPKTHNSFADILPSSRGYSLSDVRLDIQNPTTAVFKAKLNGPAGSPVWARAWLSTEAGTLAESASLQLNAGDEVTLEVILRSPEQPQYAYMRIESAPLKTEHVVVLKFT
Ga0209006_106460221	3300027908	Forest Soil	MSDSENSFEDILPSSSGYSLSQVRLEMTNPALAVFKAKLHGPNGMPVWARAWLSTEAGTLAESASPQLKAGDEVTLEVALRGAVSLQFSHVLLQSQPREWHEPCSSKRP
Ga0265326_100194401	3300028558	Rhizosphere	MLIPTTKTLTTFTDMLRPAHGYFLSDVRLDIPNPTTAIFKATLNGPKGAPVWVRAWLSTEAGTLAETASPQMAAGETITLEVKLHRTEPPQYAYLRIESAPLKTEHVVVLKLL
Ga0265326_101604052	3300028558	Rhizosphere	MLTPTSKPLTSFTDMLRPAHGYFLTNAQLEISNPTTAIFKATPNGPKNAPVWARAWLSTEAGTLAETASPELKAGETVTLTVVLRKTEIPQFAYLRIESAPLKTEHVLALKLK
Ga0302189_103178232	3300028788	Bog	MMIKSLARLGSALGTLNHTTMLTPHFTTRDSFVDILPPAHGYSLSDVRLEIPNPTTAIFKATLNGPNGAPVWARAWLSTEAGTLAESASHQLRAGHQVTLEVILRSSESPQSAYMRIESAPLKTEHVVVLKLN
Ga0265338_1000046042	3300028800	Rhizosphere	MLTSTTKSLTTFADMLRPAHGYFLADVRLDIPNPTTAIFKATLNGPKGTPVWARAWLSTEEGTLAETASPQMTAGETITLEVKLHHTESPQYAYLRIESAPLKTEHVVALKLT
Ga0265338_1000336820	3300028800	Rhizosphere	MLTPTSNTLDSFVDMLPPSQDYSLSDVRLEIPNPTTAIFKAKVNGPDGAPVWARAWLSTEAGTLAESASHQLRAGDHVTLEVILRSSESPRSAYMRIESAPLKTEHVVVLKLN
Ga0265338_100034056	3300028800	Rhizosphere	MLTPNSNMLDSFVNVLPPSQGYSLSDVRLEIPNPTTAIFKARLNGPEGAPVWVRAWLSTEAGTLAETASPQLRAGDQVALEVALRNAESPQNAYMRIESAPLKTEHVVVLKLK
Ga0265338_101698843	3300028800	Rhizosphere	MLTPASNTLDTFVNILPPSRGYSLSGVRLDIPNPTTAIFKATLNGPEGAPVWVRAWLSTEAGTLAEAASPQLRAGDHVTLEVVLQGRESPQSAYMRIESAPLKTEHVVVLKLT
Ga0265338_102509592	3300028800	Rhizosphere	IPTTKTLTTFTDMLRPAHGYFLSDVRLDIPNPTTAIFKATLNGPKGAPVWVRAWLSTEAGTLAETASPQMAAGETITLEVKLHRTEPPQYAYLRIESAPLKTEHVVVLKLL
Ga0265338_103506682	3300028800	Rhizosphere	MLTPTSKPLTSFTDMLRPAHGYFLSDASLEIPNPTTAIFKATLNGPNGAPVWVRAWLSTEAGTLAETASPELKADETVTLTVVLRSPESPQYAYLRIESAPLKTEHVLALKLA
Ga0265338_106967021	3300028800	Rhizosphere	MIISALMLTPSTSSRDSFVDMLPALHGYSLSHVRLDIPNASTAVFRAKLNGPDGSSVWARAWLSTEAGTLAESGSPQLKAGDEVTLEVMLHGSASPKFAY
Ga0265338_109003352	3300028800	Rhizosphere	GRSAMSSSEDSFEEVVASSRGYSLSHVRLDMASPAVAVFRARLNGPAGRPVWTRAWLSTEAGTLAESASPQMKAGDEVTLEVALRGAVSPQFAYMRIESAPLQTEHVVVRKLP
Ga0311363_100653325	3300029922	Fen	MLTPHFTTRDSFVDILPRAHGYSLSDVRLEIPNPTTAIFKATLNGPNGAPVWARAWLSTEAGTLAESASHQLRAGHQVTLEVILRSSESPQSAYMRIESAPLKTEHVVVLKLN
Ga0311346_102100383	3300029952	Bog	MLTPHFTTRDSFVDILPPAHGYSLSDVRLEIPNPTTAIFKATLNGPNGAPVWARAWLSTEAGTLAESASHQLRAGHQVTLEVILRSSESPQSAYMRIESAPLKTEHVVVLKLN
Ga0311331_107430331	3300029954	Bog	HTTMLTPHFTTRDSFVDILPRAHGYSLSDVRLEIPNPTTAIFKATLNGPNGAPVWARAWLSTEAGTLAESASHQLRAGHQVTLEVILRSSESPQSAYMRIESAPLKTEHVVVLKLN
Ga0265324_102164321	3300029957	Rhizosphere	TFADMLRPAHGYFLADVRLDIPNPTTAIFKATLNGPKGTPVWARAWLSTEEGTLAETASPQMTAGETITLEVKLHHTESPQYAYLRIESAPLKTEHVVALKLT
Ga0302277_10909831	3300029982	Bog	MLTPHFTTRDSFVDILPRAHGYSLSDVRLEIPNPTTAIFKATLNGPNGAPVWARAWLSTEAGTLAESASHQLRAGHQVTLEVILRSSESPQSAYMRIESAPLKT
Ga0302282_13679602	3300030045	Fen	RAHGYSLSDVRLEIPNPTTAIFKATLNGPNGAPVWARAWLSTEAGTLAESASHQLRAGHQVTLEVILRSSESPQSAYMRIESAPLKTEHVVVLKLN
Ga0311370_108555722	3300030503	Palsa	MLTPTAKVLNSFVDALPPSQGYFLSDVQLEIPNPTTAIFRAKLNGPEGTPAWVRAWLSTEADTLAEAASAELKAGDHVTLELVLRSSESPQSAYVRIESAPLKTEHVVVLILD
Ga0302324_1015775792	3300031236	Palsa	MLTPSSNVRDAFVNILPPSRGYSLADVRLEIRNPTTALFKAKLDGPEGAPVWVRAWLSTEAGTLAETASHQLRAGEYVTLEVMLQSPESPQSAYMRIESAPLKTEHVVVQRLT
Ga0265320_1000094711	3300031240	Rhizosphere	MLHLSNNFMLTPNSNMLDSFVNVLPPSQGYSLSDVRLEIPNPTTAIFKARLNGPEGAPVWVRAWLSTEAGTLAETASPQLRAGDQVALEVALRNAESPQNAYMRIESAPLKTEHVVVLKL
Ga0302140_100534095	3300031261	Bog	MMIKSLARLGSALGTLNHTTMLTPHFTTRDSFVDILPRAHGYSLSDVRLEIPNPTTAIFKATLNGPNGAPVWARAWLSTEAGTLAESASHQLRAGHQVTLEVILRSSESPQSAYMRIESAPLKTEHVVVLKLN
Ga0302326_131257161	3300031525	Palsa	ILPPSRGYSLADVRLEIPNPTTSIFKAKLNGPEGAPVWVRAWLSTEAGTLAETASHQLRAGEYVTLEVMLQSPESPQSAYMRIESAPLKTEHVVVQRLT
Ga0310915_111014562	3300031573	Soil	MENYTRPRFKLMLTPFSRSRDSFVDFLRPSHGYSLSDVRLDRPNSTTAIFKARLNGPEGKPAWVRAWLSTEEGTLAESASPQLMSGDEVTLQVVLQSPVSPQCAYMRIESAPLNTEHVVGLKLA
Ga0306925_107483122	3300031890	Soil	VDILSPSHAYSLSEVRLDVPNPTVAIFKARLNGPAGMPVWARAWLSTEAGTLAESASPQLKSGDEVTLQVVLGRTESPEYAYMRIESAPLNTEHVVALKLE
Ga0302322_1020052702	3300031902	Fen	PLLTNIKETGISWTATGNRNTVEPNNPMPIPDPDRAQSFVDMMPPSHGYSLSDVRFERPDPTHAIFKATLNGPAGAPVWARAWLSTEAGTLAETASPQLKTGDHVTLEVTLPSTVPPQYAYLRIESAPLATEHVVKLKLT
Ga0306923_118702232	3300031910	Soil	MENYTRPRFKLMLTPFSRSRDSFVDFLRPSHGYSLSDVRLDIPNSTTAIFKARLNGPEGKPVWVRAWLSTEEGTLAESASPQLMSGDEVTLQVVLQSPVSPQCAYMRIESAPLDTEHVVGLKLA
Ga0306921_115816361	3300031912	Soil	MTPGHYDSFADILPSSHGYFLSEMQLDIATPTTAIFKAKLNGPAGSPVWARAWLSTEEGTLAESASPQMEAGDEVTLEVKLRSSESPQSGYMRIESTPLHTEHVVGVKLA
Ga0335082_110920531	3300032782	Soil	MLTPTSNTLNSFVNLLAPSRGYSLSDVRLEIPNPTTAIFKARLNGPEGAPVWVRAWLSTEAGTLAEAASHQLRAGDSVRLEVMLQSSESPQSAYMRIESAPLKTEHVVVLSLPES
Ga0335078_10000072119	3300032805	Soil	MMSPSHDYWLSDVRLEIPNPTTAIFKARLNGPEGVPVWARAWLSTEAGTLAEAASHQLKAGDSVTLEVILQSSESPQSAYMRIESAPLKTEHVVVLKFN
Ga0310914_113263381	3300033289	Soil	MENYTRPRFKLMLTPFSRSRDSFVDFLRPSHGYSLSDVRLDIPNSTTAIFKARLNGPEGKPVWVRAWLSTEEGTLAESASPQLMSGDEVTLQVVLQSPVSPQCAYMRIESAPLN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095647

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences