NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F095624

Metagenome Family F095624

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095624
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 45 residues
Representative Sequence MTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKRKGK
Number of Associated Samples 76
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 80.95 %
% of genes near scaffold ends (potentially truncated) 30.48 %
% of genes from short scaffolds (< 2000 bps) 95.24 %
Associated GOLD sequencing projects 67
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (30.476 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(63.809 % of family members)
Environment Ontology (ENVO) Unclassified
(94.286 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(93.333 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 82.98%    β-sheet: 0.00%    Coil/Unstructured: 17.02%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF05013FGase 1.92
PF07460NUMOD3 0.96
PF01364Peptidase_C25 0.96
PF04055Radical_SAM 0.96
PF00089Trypsin 0.96
PF00542Ribosomal_L12 0.96
PF01844HNH 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG3741N-formylglutamate amidohydrolaseAmino acid transport and metabolism [E] 1.92
COG3931Predicted N-formylglutamate amidohydrolaseAmino acid transport and metabolism [E] 1.92
COG0222Ribosomal protein L7/L12Translation, ribosomal structure and biogenesis [J] 0.96


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms69.52 %
UnclassifiedrootN/A30.48 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002514|JGI25133J35611_10037392All Organisms → Viruses → Predicted Viral1751Open in IMG/M
3300002514|JGI25133J35611_10171721All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes583Open in IMG/M
3300002518|JGI25134J35505_10123939Not Available544Open in IMG/M
3300002519|JGI25130J35507_1066902All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium684Open in IMG/M
3300005400|Ga0066867_10345455Not Available530Open in IMG/M
3300005426|Ga0066847_10155518All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300005427|Ga0066851_10077596All Organisms → cellular organisms → Bacteria1097Open in IMG/M
3300005427|Ga0066851_10083036Not Available1053Open in IMG/M
3300005508|Ga0066868_10159559Not Available699Open in IMG/M
3300005521|Ga0066862_10188937All Organisms → cellular organisms → Archaea684Open in IMG/M
3300005551|Ga0066843_10169691All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300005953|Ga0066383_10183561All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300005969|Ga0066369_10161068All Organisms → cellular organisms → Archaea744Open in IMG/M
3300006076|Ga0081592_1255091All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium501Open in IMG/M
3300006304|Ga0068504_1206570All Organisms → cellular organisms → Archaea694Open in IMG/M
3300006306|Ga0068469_1148581All Organisms → cellular organisms → Archaea939Open in IMG/M
3300006308|Ga0068470_1212417All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium616Open in IMG/M
3300006310|Ga0068471_1170881All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1136Open in IMG/M
3300006311|Ga0068478_1235958Not Available681Open in IMG/M
3300006311|Ga0068478_1236958All Organisms → cellular organisms → Archaea962Open in IMG/M
3300006335|Ga0068480_1193703All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300006336|Ga0068502_1274645All Organisms → cellular organisms → Archaea820Open in IMG/M
3300006338|Ga0068482_1615608Not Available570Open in IMG/M
3300006340|Ga0068503_10264026All Organisms → Viruses → Predicted Viral1640Open in IMG/M
3300006340|Ga0068503_10280218All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota3055Open in IMG/M
3300006340|Ga0068503_10419219Not Available1714Open in IMG/M
3300006340|Ga0068503_10498624All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium518Open in IMG/M
3300006340|Ga0068503_10547579Not Available768Open in IMG/M
3300006340|Ga0068503_10592924All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300006341|Ga0068493_10679271Not Available541Open in IMG/M
3300006414|Ga0099957_1293115All Organisms → cellular organisms → Archaea633Open in IMG/M
3300006736|Ga0098033_1100479All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium823Open in IMG/M
3300006736|Ga0098033_1219119Not Available524Open in IMG/M
3300006738|Ga0098035_1055288All Organisms → Viruses → Predicted Viral1442Open in IMG/M
3300006750|Ga0098058_1115335All Organisms → cellular organisms → Archaea721Open in IMG/M
3300006751|Ga0098040_1101485Not Available866Open in IMG/M
3300006900|Ga0066376_10220460All Organisms → Viruses → Predicted Viral1131Open in IMG/M
3300006900|Ga0066376_10690431All Organisms → cellular organisms → Archaea562Open in IMG/M
3300006926|Ga0098057_1138163Not Available594Open in IMG/M
3300006927|Ga0098034_1049997Not Available1234Open in IMG/M
3300006927|Ga0098034_1130270Not Available713Open in IMG/M
3300006927|Ga0098034_1214823All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium535Open in IMG/M
3300007160|Ga0099959_1206309Not Available757Open in IMG/M
3300008050|Ga0098052_1139269Not Available966Open in IMG/M
3300008216|Ga0114898_1062495All Organisms → Viruses → Predicted Viral1164Open in IMG/M
3300009173|Ga0114996_10223220All Organisms → Viruses → Predicted Viral1507Open in IMG/M
3300009173|Ga0114996_10289102All Organisms → cellular organisms → Archaea1286Open in IMG/M
3300009173|Ga0114996_11007924Not Available591Open in IMG/M
3300009173|Ga0114996_11269448All Organisms → cellular organisms → Archaea513Open in IMG/M
3300009409|Ga0114993_10874544All Organisms → cellular organisms → Archaea645Open in IMG/M
3300009418|Ga0114908_1137173All Organisms → cellular organisms → Archaea793Open in IMG/M
3300009605|Ga0114906_1256302Not Available568Open in IMG/M
3300009622|Ga0105173_1088507All Organisms → cellular organisms → Archaea559Open in IMG/M
3300009706|Ga0115002_10772958All Organisms → cellular organisms → Archaea673Open in IMG/M
3300009706|Ga0115002_10947182All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300009786|Ga0114999_10673341Not Available777Open in IMG/M
3300010155|Ga0098047_10152661All Organisms → cellular organisms → Archaea893Open in IMG/M
3300010883|Ga0133547_10593509All Organisms → cellular organisms → Archaea2216Open in IMG/M
3300010883|Ga0133547_11451055All Organisms → Viruses → Predicted Viral1291Open in IMG/M
3300010883|Ga0133547_11512171All Organisms → cellular organisms → Archaea1259Open in IMG/M
3300010883|Ga0133547_12041227All Organisms → Viruses → Predicted Viral1048Open in IMG/M
3300017704|Ga0181371_1016368All Organisms → Viruses → Predicted Viral1245Open in IMG/M
3300017705|Ga0181372_1035615Not Available842Open in IMG/M
3300017715|Ga0181370_1017915All Organisms → cellular organisms → Archaea924Open in IMG/M
3300017718|Ga0181375_1045240All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300017775|Ga0181432_1076688All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium971Open in IMG/M
3300017775|Ga0181432_1231991All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes581Open in IMG/M
3300017775|Ga0181432_1248427Not Available561Open in IMG/M
3300021442|Ga0206685_10155431Not Available765Open in IMG/M
3300021979|Ga0232641_1023597Not Available2328Open in IMG/M
3300022225|Ga0187833_10311339All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 4572_77871Open in IMG/M
3300022227|Ga0187827_10361111Not Available914Open in IMG/M
3300025046|Ga0207902_1018829All Organisms → cellular organisms → Archaea803Open in IMG/M
3300025072|Ga0208920_1000705Not Available8512Open in IMG/M
3300025082|Ga0208156_1065531All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium700Open in IMG/M
3300025097|Ga0208010_1017369All Organisms → cellular organisms → Archaea1786Open in IMG/M
3300025097|Ga0208010_1042160All Organisms → Viruses → Predicted Viral1035Open in IMG/M
3300025097|Ga0208010_1101121Not Available593Open in IMG/M
3300025097|Ga0208010_1127144All Organisms → cellular organisms → Archaea509Open in IMG/M
3300025112|Ga0209349_1009821Not Available3778Open in IMG/M
3300025112|Ga0209349_1076705Not Available990Open in IMG/M
3300025112|Ga0209349_1130409All Organisms → cellular organisms → Archaea692Open in IMG/M
3300025118|Ga0208790_1110451Not Available791Open in IMG/M
3300025122|Ga0209434_1035349All Organisms → Viruses → Predicted Viral1611Open in IMG/M
3300025873|Ga0209757_10256428All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300026191|Ga0208523_1056772All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium510Open in IMG/M
3300026193|Ga0208129_1070420All Organisms → cellular organisms → Archaea713Open in IMG/M
3300026209|Ga0207989_1100195All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300026211|Ga0208132_1138508All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium530Open in IMG/M
3300026253|Ga0208879_1218244All Organisms → cellular organisms → Archaea730Open in IMG/M
3300026260|Ga0208408_1076865Not Available1027Open in IMG/M
3300026262|Ga0207990_1160703All Organisms → cellular organisms → Archaea528Open in IMG/M
3300027685|Ga0209554_1136041All Organisms → cellular organisms → Archaea766Open in IMG/M
3300027685|Ga0209554_1136041All Organisms → cellular organisms → Archaea766Open in IMG/M
3300027685|Ga0209554_1230521Not Available524Open in IMG/M
3300027714|Ga0209815_1116792All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300027771|Ga0209279_10277389All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300027838|Ga0209089_10157021All Organisms → Viruses → Predicted Viral1365Open in IMG/M
3300027839|Ga0209403_10144194All Organisms → cellular organisms → Archaea1486Open in IMG/M
3300031801|Ga0310121_10554518All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300031801|Ga0310121_10665747All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300031886|Ga0315318_10485406Not Available705Open in IMG/M
3300032278|Ga0310345_11192173All Organisms → cellular organisms → Archaea745Open in IMG/M
3300032360|Ga0315334_11191797All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300032820|Ga0310342_100726141All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1142Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine63.81%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine13.33%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater3.81%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine3.81%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean2.86%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater2.86%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.86%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.90%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.90%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.95%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids0.95%
Diffuse Hydrothermal FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002519Marine viral communities from the Pacific Ocean - ETNP_2_300EnvironmentalOpen in IMG/M
3300005400Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261EnvironmentalOpen in IMG/M
3300005426Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74EnvironmentalOpen in IMG/M
3300005427Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65EnvironmentalOpen in IMG/M
3300005508Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259EnvironmentalOpen in IMG/M
3300005521Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255EnvironmentalOpen in IMG/M
3300005551Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89AEnvironmentalOpen in IMG/M
3300005953Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_AEnvironmentalOpen in IMG/M
3300005969Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_AEnvironmentalOpen in IMG/M
3300006076Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid AEnvironmentalOpen in IMG/M
3300006304Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000mEnvironmentalOpen in IMG/M
3300006306Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500mEnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006311Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000mEnvironmentalOpen in IMG/M
3300006335Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500mEnvironmentalOpen in IMG/M
3300006336Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500mEnvironmentalOpen in IMG/M
3300006338Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006341Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770mEnvironmentalOpen in IMG/M
3300006414Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500mEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300007160Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_1000mEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300017704Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaGEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017715Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaGEnvironmentalOpen in IMG/M
3300017718Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300021442Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015EnvironmentalOpen in IMG/M
3300021979Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Hafa_FS926 _150kmerEnvironmentalOpen in IMG/M
3300022225Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022227Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025082Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025097Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026191Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF82A (SPAdes)EnvironmentalOpen in IMG/M
3300026193Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47B (SPAdes)EnvironmentalOpen in IMG/M
3300026209Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65 (SPAdes)EnvironmentalOpen in IMG/M
3300026211Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199 (SPAdes)EnvironmentalOpen in IMG/M
3300026253Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A (SPAdes)EnvironmentalOpen in IMG/M
3300026260Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 (SPAdes)EnvironmentalOpen in IMG/M
3300026262Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75 (SPAdes)EnvironmentalOpen in IMG/M
3300027685Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027771Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027839Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031886Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25133J35611_1003739263300002514MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMNKYKEKA*
JGI25133J35611_1017172123300002514MarineMTMQEILDRINDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKNKA*
JGI25134J35505_1012393933300002518MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYK
JGI25130J35507_106690213300002519MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKRKGK*
Ga0066867_1034545513300005400MarineEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKNKA*
Ga0066847_1015551833300005426MarineMTLQEVLDRVNDIIDNHNYHELDLLRSDLEDDIIWENKMKKYK
Ga0066851_1007759623300005427MarineMTLQEVLDRVNDIIDNHNHHELELLRSDLEDDIIWENKMEKATRKGR*
Ga0066851_1008303613300005427MarineMTMQEVLDRVNDIIDNHNHHELELLRSDLEDDIIWENKMNKYKRPIKSR*
Ga0066868_1015955913300005508MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKNKA*
Ga0066862_1018893713300005521MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMNKYKRPIKSR*
Ga0066843_1016969133300005551MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKN
Ga0066383_1018356123300005953MarineMTMQEVLNRVNDIIDNHNHHELNLLRNDLEDDIIWENKMEKYKNKR*
Ga0066369_1016106823300005969MarineMTMQEVLNRVNDIIDNHNHHELNLLRNDLEDDIIWENKMNKCKPKGK*
Ga0081592_125509123300006076Diffuse Hydrothermal FluidsMTMQEVLDRVNDIIDNHNHHELNLLRNDLEDDIIWENKMNKYKPKGK*
Ga0068504_120657023300006304MarineMTMQEVLNRVNDIIDNHNHHELNLLRSDLEDDIIWENKMNKYKRKGK*
Ga0068469_114858123300006306MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKIHRKNVDLRS*
Ga0068470_121241723300006308MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKHVK*
Ga0068471_117088113300006310MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWE
Ga0068478_123595833300006311MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKNKA*LIYLKPVIL
Ga0068478_123695823300006311MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKNKA*
Ga0068480_119370313300006335MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYRRKGK*
Ga0068502_127464533300006336MarineMTMQEVLDRVNDIIDNHNHHELEFLRNDLEDDIIWENKMNKYKEKA*
Ga0068482_161560813300006338MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKKKGK*
Ga0068503_1026402623300006340MarineMTMQEVLDRVNDIIDNHNHHELNLLRNDLEDDIIWENKMEKATRKGS*
Ga0068503_1028021853300006340MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMEKATRKGK*
Ga0068503_1041921973300006340MarineMKMQEVLDRVNDIIDNHNYHELDLLRSDLEDDIICENKMKKYKRKGK*
Ga0068503_1049862433300006340MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWERRMRKYKKDGRVKLNKNK
Ga0068503_1054757933300006340MarineMTLQEVLDRVNDIIDNHNHNELDLLRSDLEDDIIWENEMKKPLK*
Ga0068503_1059292423300006340MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKEKA*
Ga0068493_1067927123300006341MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMRKYKKDN*
Ga0099957_129311523300006414MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMEKATRKGK
Ga0098033_110047923300006736MarineMTMQEVLNRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKRKGK*
Ga0098033_121911913300006736MarineLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMSKYKK*
Ga0098035_105528883300006738MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKTKRNLK*
Ga0098058_111533543300006750MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWERKM
Ga0098040_110148533300006751MarineDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKRKGK*
Ga0066376_1022046053300006900MarineMTMQEVLNRVNDIIDNHNHHELNLLRNDLEDDIIWENKMNKYK
Ga0066376_1069043123300006900MarineMTMQEVLDRVNDIIDNHNHHELNLLRNDLEDDIIWENKMEKYKNKA*LTWQNVRILR*
Ga0098057_113816313300006926MarineQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKRKGK*
Ga0098034_104999733300006927MarineVTKQEILDRIYNIIDNKGFNDVDLDLLRNDLEDDIIWEKKMKKYKNKA*
Ga0098034_113027023300006927MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKRKGK*
Ga0098034_121482323300006927MarineMTMQEILDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKNKA*
Ga0099959_120630923300007160MarineMTMQEVLNRVNDIIDNHNHHELNLLRSDLEDDIIWENKMKKYKRRGK*
Ga0098052_113926933300008050MarineTLQEVLDRVNDIIDNHNHHELDLLRHDLENDIIWENKMKKYKRPTTSR*
Ga0114898_106249513300008216Deep OceanMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKKKA*
Ga0114996_1022322063300009173MarineMTMQEVLDRVNDIIDNHNHHELNLLRSDLEDDIIWEKMNGDK*
Ga0114996_1028910213300009173MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWEKMNGDK*
Ga0114996_1100792413300009173MarineEVLNRVNDIIDNHNHHELNLLRNDLEDDIIWENKMNKYKEKA*
Ga0114996_1126944823300009173MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWEKMKGDK*
Ga0114993_1087454433300009409MarineIDNHNHHELNLLRNDLEDDIIWENKMNEYKPKGK*
Ga0114908_113717313300009418Deep OceanMTMQEVLDRVNDIIDNHNYHELDLLRSDLEDDIIWENKMEKATRKGS*
Ga0114906_125630213300009605Deep OceanQMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKPLK*
Ga0105173_108850713300009622Marine OceanicEVLNRVNDIIDNHNHHELNLLRNDLEDDIIWENKMNKYKPKGK*
Ga0115002_1077295823300009706MarineMTMQEVLNRVNDIIDNHNHHELNLLRNDLEDDIIWEKMNGDK*
Ga0115002_1094718213300009706MarineMTMQEVLDRVNDIIDNHNYHELDLLRSDLEDDIIW
Ga0114999_1067334123300009786MarineMTMQEVLNRVNDIIDNHNHHELNLLRNDLEDDIIWENKMNEYKPKGK*
Ga0098047_1015266113300010155MarineMTMQEVLDRVNDIIDNHNHHELELLRSDLEDDIIWENKMEKNKKKPLTYIPK*
Ga0133547_1059350953300010883MarineMTMQEVLNRVNDIIDNHNHHELNLLRSDLEDDIIWENKMNKYKK*
Ga0133547_1145105553300010883MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMEKATRKGK*
Ga0133547_1151217133300010883MarineMTMQEVLDRVNDIIDNHNHHELNLLRSDLEDDIIWEKMKGDK*
Ga0133547_1204122733300010883MarineTMQEVLDRVNDIIDNHNHHELELLRSDLEDDIIWENKMEKATRKGS*
Ga0181371_101636823300017704MarineMTMQEVLDRVNDIIDNHNHHELDLLRHDLENDIIWENKMKKYKRPTTSR
Ga0181372_103561523300017705MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKTKRNLK
Ga0181370_101791533300017715MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKRKGK
Ga0181375_104524023300017718MarineMTLQEVLDRVNDIIDNHNHHELDLLRHDLENDIIWENKMKKYKRPTTSR
Ga0181432_107668833300017775SeawaterMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMEKATRKGR
Ga0181432_123199123300017775SeawaterMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKISKYKRKGK
Ga0181432_124842733300017775SeawaterMTMQEVLDRVSDIIDNHNHHELDLLRSDLEDDIIWKEKMSKYKTRKNSK
Ga0206685_1015543113300021442SeawaterNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKNKA
Ga0232641_102359713300021979Hydrothermal Vent FluidsMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWEKKMEKATRKGK
Ga0187833_1031133933300022225SeawaterVTKQEILDRIYNIIDNKGFNDVDLDLLRNDLEDDIIWEKKMKKYKTKP
Ga0187827_1036111113300022227SeawaterLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKRKGK
Ga0207902_101882933300025046MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMNKYKRKDK
Ga0208920_100070583300025072MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKTKRNLK
Ga0208156_106553123300025082MarineMTMQEVLDRVNDIIDNHNHHELELLRSDLEDDIIWENNMKNPSLNLKRKSK
Ga0208010_101736943300025097MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMNKYKEKA
Ga0208010_104216023300025097MarineVTKQEILDRIYNIIDNKGFNDVDLDLLRNDLEDDIIWEKKMKKYKNKA
Ga0208010_110112143300025097MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKRKGK
Ga0208010_112714413300025097MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMNKYKK
Ga0209349_100982163300025112MarineMTKQEILDRIYNIIDNKGFNDVDLDLLRNDLEDDIIWENKMKNIKQGVNNE
Ga0209349_107670513300025112MarineVNDIIDNHNHHELELLRSDLEDDIIWENKMEKATRKGK
Ga0209349_113040933300025112MarineMTMQEILDRINDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKNKA
Ga0208790_111045113300025118MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKNKA
Ga0209434_103534973300025122MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKTRSK
Ga0209757_1025642823300025873MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMRKYKKGN
Ga0208523_105677223300026191MarineMTLQEVLDRVNDIIDNHNHHELELLRSDLEDDIIWENKMRKYKKDN
Ga0208129_107042013300026193MarineMTMQEVLDRVNDIIDNHNHHELELLRSDLEDDIIWENKMEKATR
Ga0207989_110019533300026209MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKKKA
Ga0208132_113850823300026211MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKNKA
Ga0208879_121824433300026253MarineRCQMTMQEVLDRVNDIIDNHNHHELNLLRNDLEDDIIWENKMNKCKPKGK
Ga0208408_107686523300026260MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMNKYKRPIKSR
Ga0207990_116070313300026262MarineMTLQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWESKM
Ga0209554_113604113300027685MarineMTMQEVLNRVNDIIDNHNHHELNLLRNDLEDDIIWENKMN
Ga0209554_113604143300027685MarineLNRVNDIIDNHNHHELNLLRNDLEDDIIWENKMNKYKPKGK
Ga0209554_123052123300027685MarineRVNDIIDNHNHHELNLLRNDLEDDIIWENKMEKYKK
Ga0209815_111679213300027714MarineMTMQEVLNRVNDIIDNHNHHELNLLRNDLEDDIIWENKMNEYKPKGK
Ga0209279_1027738933300027771MarineMTMQEVLNRVNDIIDNHNHHELNLLRNDLEDDIIWENKMEKATRKGS
Ga0209089_1015702143300027838MarineMTMQEVLDRVNDIIDNHNHHELNLLRSDLEDDIIWEKMNGDK
Ga0209403_1014419413300027839MarineMTMQEVLDRVNDIIDNHNYHELDLLRSDLEDDIIWEKMNGDK
Ga0310121_1055451813300031801MarineMTMQEVLDRVNDIIDNHNHHELELLRSDLEDDIIW
Ga0310121_1066574713300031801MarineMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWEEKISKYKK
Ga0315318_1048540623300031886SeawaterMTMQEVLNRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKYKNKA
Ga0310345_1119217323300032278SeawaterMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMEKATRKGR
Ga0315334_1119179723300032360SeawaterMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKPLK
Ga0310342_10072614133300032820SeawaterMTMQEVLDRVNDIIDNHNHHELDLLRSDLEDDIIWENKMKKHVK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.