Metagenome / Metatranscriptome Family F095604

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095604
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	64 residues
Representative Sequence	MKEADEAVRALRKLQELTDKYSNTEMNADELKTSISERINATNELKDIIQKATDAKKKNESR
Number of Associated Samples	51
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	73.08 %
% of genes near scaffold ends (potentially truncated)	18.27 %
% of genes from short scaffolds (< 2000 bps)	57.14 %
Associated GOLD sequencing projects	44
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Predicted Viral (55.769 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (51.429 % of family members)
Environment Ontology (ENVO)	Unclassified (62.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.286 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1SS1002DRAFT_0222413 2Ga0066856_100208776 3Ga0066856_100259261 4Ga0066856_100269512 5Ga0066856_100308992 6Ga0066856_100501332 7Ga0066856_101475532 8Ga0066856_102767841 9Ga0066856_102938041 10Ga0066856_103985292 11Ga0066861_102772393 12Ga0068486_101235835 13Ga0068486_10182074 14Ga0068500_11019116 15Ga0068500_11868335 16Ga0100224_11320323 17Ga0100228_12091631 18Ga0098041_11324772 19Ga0098041_11985522 20Ga0111541_102092451 21Ga0111541_104814872 22Ga0115011_1000346620 23Ga0115011_112087412 24Ga0115105_109797731 25Ga0115105_114188911 26Ga0115012_100084746 27Ga0115012_100328664 28Ga0115012_100468018 29Ga0115012_103395542 30Ga0115012_103593062 31Ga0115012_112784661 32Ga0163180_1000213916 33Ga0163180_100107237 34Ga0163180_100115214 35Ga0163180_100287293 36Ga0163180_100333144 37Ga0163179_100401055 38Ga0163179_100735644 39Ga0163179_100763583 40Ga0163179_101106825 41Ga0163111_106055491 42Ga0181411_10175761 43Ga0211707_10135004 44Ga0211654_10079643 45Ga0211654_10161353 46Ga0211654_10669042 47Ga0211584_10031713 48Ga0211584_10040624 49Ga0211584_10048876 50Ga0211584_10174153 51Ga0211586_10131062 52Ga0211586_10792961 53Ga0211520_10133753 54Ga0211515_10649072 55Ga0211542_10065233 56Ga0211706_10110945 57Ga0211706_10114032 58Ga0211601_10283671 59Ga0211611_11534573 60Ga0211652_100191013 61Ga0211652_100417742 62Ga0211652_100529302 63Ga0211652_100632322 64Ga0211652_100972561 65Ga0211497_1000012433 66Ga0211497_100647203 67Ga0211705_100124153 68Ga0211705_100648773 69Ga0211644_100376723 70Ga0211653_102467912 71Ga0211653_103220612 72Ga0211521_103575492 73Ga0211576_100517952 74Ga0211576_105074722 75Ga0211564_1000156419 76Ga0211564_1000505712 77Ga0211564_100157446 78Ga0211564_101037502 79Ga0211564_105754402 80Ga0211545_101211732 81Ga0211643_102067982 82Ga0211643_106092491 83Ga0211643_106403031 84Ga0211640_100361796 85Ga0211713_100021979 86Ga0211713_100714961 87Ga0211475_102148991 88Ga0211614_100310453 89Ga0211579_1000014627 90Ga0211579_100262893 91Ga0211579_101295352 92Ga0211547_105557442 93Ga0211503_100280495 94Ga0211503_104991152 95Ga0208261_10040345 96Ga0208261_10556973 97Ga0208130_11052232 98Ga0207993_100000944 99Ga0208277_10128897 100Ga0208277_12465132 101Ga0315332_102481011 102Ga0315331_100228032 103Ga0315331_100255263 104Ga0310343_102615163 105Ga0310344_102417192
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1SS1002DRAFT_0222413 2Ga0066856_100259261 3Ga0066856_100269512 4Ga0066856_100308992 5Ga0066856_102938041 6Ga0066856_103985292 7Ga0066861_102772393 8Ga0098041_11985522 9Ga0115105_109797731 10Ga0115012_112784661 11Ga0163111_106055491 12Ga0211707_10135004 13Ga0211654_10669042 14Ga0208130_11052232
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62 1Ga0211654_10161353 2Ga0066856_100259261 3Ga0066856_100501332 4Ga0066856_102767841 5Ga0066856_103985292 6Ga0068500_11019116 7Ga0111541_104814872 8Ga0211707_10135004 9Ga0211520_10133753 10Ga0211515_10649072 11Ga0211542_10065233 12Ga0211706_10110945 13Ga0211652_100191013 14Ga0211652_100417742 15Ga0211652_100529302 16Ga0211652_100632322 17Ga0211652_100972561 18Ga0211497_100647203 19Ga0211653_102467912 20Ga0211576_105074722
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.11% β-sheet: 0.00% Coil/Unstructured: 38.89%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01555	N6_N4_Mtase	34.29
PF13640	2OG-FeII_Oxy_3	4.76
PF04851	ResIII	1.90
PF13759	2OG-FeII_Oxy_5	1.90
PF01259	SAICAR_synt	0.95
PF08007	JmjC_2	0.95
PF04820	Trp_halogenase	0.95

Showing 1 to 7 of 7 entries

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COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	34.29
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	34.29
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	34.29
COG0152	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Nucleotide transport and metabolism [F]	0.95
COG2850	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain	Translation, ribosomal structure and biogenesis [J]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	13.46 %
Unclassified	root	N/A	22.12 %
Viruses	superkingdom	All Organisms → Viruses	64.42 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	4.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.65 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	55.77 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	4.81 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	7.69 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	55.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	7.69 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	55.77 %
Unclassified	root	N/A	22.12 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	3.85 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.81 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7.69 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.81 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.96 %
Euryarchaeota archaeon TMED129	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED129	2.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	55.77 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	4.81 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.96 %
Euryarchaeota archaeon TMED129	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED129	2.88 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	7.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	55.77 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.96 %
Euryarchaeota archaeon TMED129	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED129	2.88 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	7.69 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	4.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	55.77 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.96 %
Euryarchaeota archaeon TMED129	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED129	2.88 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	4.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	55.77 %
Unclassified	root	N/A	22.12 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	7.69 %

Name	Rank	Taxonomy	Distribution
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.96 %
Euryarchaeota archaeon TMED129	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon TMED129	2.88 %
Flavobacteriales bacterium TMED113	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED113	7.69 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	4.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	55.77 %
Unclassified	root	N/A	22.12 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005404\|Ga0066856_10020877	All Organisms → Viruses → Predicted Viral	2833	Open in IMG/M
3300005404\|Ga0066856_10025926	All Organisms → Viruses → Predicted Viral	2553	Open in IMG/M
3300005404\|Ga0066856_10026951	All Organisms → Viruses → Predicted Viral	2503	Open in IMG/M
3300005404\|Ga0066856_10030899	All Organisms → Viruses → Predicted Viral	2341	Open in IMG/M
3300005404\|Ga0066856_10050133	All Organisms → Viruses → Predicted Viral	1825	Open in IMG/M
3300005404\|Ga0066856_10147553	All Organisms → Viruses → Predicted Viral	1027	Open in IMG/M
3300005404\|Ga0066856_10276784	Not Available	725	Open in IMG/M
3300005404\|Ga0066856_10293804	Not Available	701	Open in IMG/M
3300005404\|Ga0066856_10398529	Not Available	589	Open in IMG/M
3300005522\|Ga0066861_10277239	Not Available	570	Open in IMG/M

Showing 1 to 10 of 104 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.86%
Oceanic	Environmental → Aquatic → Marine → Oceanic	44.76%
Strait	Environmental → Aquatic → Marine → Strait	0.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified	51.43%

Habitat	Taxonomy	Distribution
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	1.90%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	51.43%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	38.10%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	51.43%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	27.62%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	3.81%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	1.90%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	8.57%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.86%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.90%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.95%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.95%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005404	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205	Environmental	Open in IMG/M
3300005522	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257	Environmental	Open in IMG/M
3300006329	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0500m	Environmental	Open in IMG/M
3300006332	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0200m	Environmental	Open in IMG/M
3300006478	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0125m	Environmental	Open in IMG/M
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300008097	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (version 2)	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009679	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Showing 1 to 10 of 50 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066856_100208776	3300005404	Marine	MKEADEAVDALRKLQELTDKYSNTELNADELRTSISERINATEELKDVMRRALEAKKRNEGRRV*
Ga0066856_100259261	3300005404	Marine	MSDQGTEAARALRKLQELTAKYADMEMDADELNQSISERINATEELKNIIAKATQAKKDRERR*
Ga0066856_100269512	3300005404	Marine	MKEADEAAAALRKLQELTDKYSNIELDADELKQSISERINATNDLKDIIQKATEAKRKRDSYHQWRASD*
Ga0066856_100308992	3300005404	Marine	MTQEADEAARALRKLQDLTNKYSNLEMNGDELKQSISERINATEELKDIIARATQAKKDRESKLQ*
Ga0066856_100501332	3300005404	Marine	MKEADEAARALRKLQELTDKYSSTEMDADQLKQSISERINATEELKEVMRKATEAKKKNDSYHQWRASD*
Ga0066856_101475532	3300005404	Marine	MKEADEAVNALRKLQELTDKYSNTEMDADQLRQSISERINASEELKDVMRRALEAKKRNEGR*
Ga0066856_102767841	3300005404	Marine	MKEADEAARALRRLQELTDKYSNTEMDIDELKASISERVNASEELKSILKKAMDEKKKRDSYHQWRASD*
Ga0066856_102938041	3300005404	Marine	MKEADEAARALRKLQEITNKYSDMELDADGLKQSIKDRVNATEELKEIIRKATEA
Ga0066856_103985292	3300005404	Marine	MKEADEAARALRKLQEVTNKYSNIEMNGEELKNSIADRINATEELKEIIRKATEAKKARESGGCP*
Ga0066861_102772393	3300005522	Marine	MKEADEAARALRRLQELTDKYSNTEMDIDELKASISERVNASEELKSILKKAMDEKKKRD
Ga0068486_101235835	3300006329	Marine	MNEADEAARALRKLQELTNKYSNLEMDADELNQSISERINATEELKDIIAKATQARKDRESRRS*
Ga0068486_10182074	3300006329	Marine	MKEADEAARALRKLQELTNKYSDMELDADGLKQSIKDRVNATEELKEIIRKATEAKRKNNI*
Ga0068500_11019116	3300006332	Marine	MKEADEAAAALRKLQELTDKYSNTELDADELRASISERINATNDLKDIIKKATEAKKKRDSYHQWRASD*
Ga0068500_11868335	3300006332	Marine	MKEADEAAKALRKLQELTDKYSSTEMDADQLKASISERIQASEELKEVMRKATEAKKKNDSYHQWRASD*
Ga0100224_11320323	3300006478	Marine	MKEADEAVNALRKLQELTDKYSNTEMDAEQLKQSISERINASEELKDVMRRALEAKKRNEGR*
Ga0100228_12091631	3300006565	Marine	MKEADEAVNALRKLQELTDKYSNTEMDAEQLKQSISERINASEELKDVMRRAL
Ga0098041_11324772	3300006928	Marine	MKEADEAARALRKLQELTDKYSSTEMDADQLKASISERINATEELKEIMRKAMEAKKENDSYHQWRASD*
Ga0098041_11985522	3300006928	Marine	MTQEGDEAARALRKLQDLTTKYSTTEMDGDELRQSISERINATEELKDILKKATEAKKKRDSYKQWRATD*
Ga0111541_102092451	3300008097	Marine	MKEADEAAAALRKLQELTDKYSNTELDADELRASISERINATNELKDIIQKATEAKKKRDSYHQWRASD*
Ga0111541_104814872	3300008097	Marine	MNEADEAARALRKLQQLTNKYSNLEMDADELNQSISERINATEELKDIIAKATQARKDRESRRS*
Ga0115011_1000346620	3300009593	Marine	MTQEADEAARALRKLQELTNKYSNLEMGADELKQSISERINATEELKDILAKATQAKKDRESKLQ*
Ga0115011_112087412	3300009593	Marine	MNEADEAARALRKLQELTDKYSNLEMNADELNQSISERINATEELKDIIAKATKAREDRENRRV*
Ga0115105_109797731	3300009679	Marine	MKEADEAVRALRKLQELTDKYSNMEMDGDELKASISERINATEELKEIIRKATEAKLKNNI*
Ga0115105_114188911	3300009679	Marine	MTQEGDEAARALRKLQDLTTKYSTTEMDGDELRQSISERINATEELKEILKKATEAKKKRDSYRQWRASD*
Ga0115012_100084746	3300009790	Marine	MTQEGDAAAKALAKLQELTNKYSTTEMDGDELRQSISERINATEELKTILKNATEAKKKRDSYRQWRASD*
Ga0115012_100328664	3300009790	Marine	MKEADEAARALRKLQELTNKYSDMELDADGLKASIKDRINATEELKEIIRKATEAKRKNNI*
Ga0115012_100468018	3300009790	Marine	MKEADEAADALRKLQELTDKYSNTEMDADQLKASISERIQASEDLKDVMRRALEAKRRNETR*
Ga0115012_103395542	3300009790	Marine	MSDQGTEAARALRKLQELTAKYADMEMNADELNQSISERINATEELKDIIAKATQAKKDRERR*
Ga0115012_103593062	3300009790	Marine	MSDQGTEAARALRKLQELTNKYADIEMGADELKQSISERINATEELKDIIAKATQAKKDRENRRV*
Ga0115012_112784661	3300009790	Marine	ALRKLQELTDKYSNTEMNADELKTSISERINATNELKDIIQKATDAKKKNEGR*
Ga0163180_1000213916	3300012952	Seawater	MKEADEAARALRKLQELTDKYSGTELNGDELKASIAERINASEELKEILRKATEAKKKQDSSYHQWRASD*
Ga0163180_100107237	3300012952	Seawater	MKEADEAVNALRKLQELTDKYSNTELNADELKTSISERINATEELKDVMRRALEAKKRNEGRRV*
Ga0163180_100115214	3300012952	Seawater	MKEADEAAAALRKLQELTDKYSNTELDADELRASISERINATNDLKDIIQKATEAKKKRDSYHQWRASD*
Ga0163180_100287293	3300012952	Seawater	MKEADEAARALRKLQELTDKYSSTEMDADQLKASISERINASEELKEVMRKATEAKKKNDSYHQWRASD*
Ga0163180_100333144	3300012952	Seawater	MKEADDAVRALRKLQELTDKYSNTEMDIDQLKASISERINATNELKDIIQKATDAKKRNEGR*
Ga0163179_100401055	3300012953	Seawater	MKEADEAARALRKLQELTDKYSDTELDGDELKASIAERINASEELKDILRKATEAKKKQDSSYHQWRASD*
Ga0163179_100735644	3300012953	Seawater	MKEADEAVNALRKLQELTDKYSNTEMDADQLRQSISERINATEELKDVMKRALEAKKRNEGR*
Ga0163179_100763583	3300012953	Seawater	MNEADEAVNALRKLQELTDKYSNTELNADELKTSISERINATEELKDVMRRALEAKRRNEGRKV*
Ga0163179_101106825	3300012953	Seawater	MNEADEAVNALRKLQELTDKYSNTELNADELKTSISERINATEELKDVMRRALEAKKRNEGRRV*
Ga0163111_106055491	3300012954	Surface Seawater	ARALRKLQELTDKYSSTEMDADQLKASISERINATEELKEIMRKAMEAKKENDSYHQWRASD*
Ga0181411_10175761	3300017755	Seawater	MKEADEAVRALRKLQELTDKYSNMEMDGDELKASISERINATEELKEIIRKATEAKLKNN
Ga0211707_10135004	3300020246	Marine	MKGNEGDEAAKALEKLINLTKKYSETELDEDGLRESISERINATNELKDILTKAKNARES
Ga0211654_10079643	3300020247	Marine	MKEADEAARALRKLQELTDKYSSTEMDADQLKASISERINATEELKEIMRKAMEAKKENDSYHQWRASD
Ga0211654_10161353	3300020247	Marine	MKEADEAVRALRKLQELTDKYSNTEMNADELKTSISERINATNELKDIIQKATDAKKKNESR
Ga0211654_10669042	3300020247	Marine	MKEADEAAQALQRLQDLTNKYSDMEMDGEELTTSIKDRVNAAEDLKRILRDATEAKTR
Ga0211584_10031713	3300020248	Marine	MKEADEAADALRKLQELTDKYSNTEMDADQLKASISERIQASEDLKDVMRRALEAKRRNETR
Ga0211584_10040624	3300020248	Marine	MKEADEAARALRKLQELTNKYSDMELDADGLKQSIKDRVNATEELKEIIRKATEAKRKNN
Ga0211584_10048876	3300020248	Marine	MKEADEAAAALRKLQELTDKYSNTELDADELRASISERINATNELKDIIQKATEAKRKRDSYHQWRASD
Ga0211584_10174153	3300020248	Marine	MSDQGTEAARALRKLQELTNKYADIEMGADELKQSISERINATEELKDIIAKATQAKKDRENR
Ga0211586_10131062	3300020255	Marine	MSDQGTEAARALRKLQELTNKYADIEMGADELKQSISERINATEELKDIIAKATQAKKDRENRRV
Ga0211586_10792961	3300020255	Marine	MKEADEAVNALRKLQELTDKYSNTEMDADQLRQSISERINASEELKDVMRRALEAKRRNETGSV
Ga0211520_10133753	3300020294	Marine	MKEADEAVNALRKLQELTDKYSNTEMDADQLRQSISERINATEELKDVMKRALEAKKRNEGR
Ga0211515_10649072	3300020310	Marine	MKEADEAARALRKLQELTDKYSDTELDGDELKASIAERINASEELKDILRKATEAKKKQDSSYHQWRASD
Ga0211542_10065233	3300020312	Marine	MTQEADEAARALRKLQELTNKYSNLEMDGDELKQSISERINATEELKDIIAKATQAKKDREARYNK
Ga0211706_10110945	3300020345	Marine	MTQEGDAAAKALAKLQELTNKYSTTEMDGDELKQSISERINATEELKTILKNATEAKKKRDSYRQWRASD
Ga0211706_10114032	3300020345	Marine	MKEADEAVNALRKLQELTDKYSNTEMDADQLRQSISERINATEELKDVMRRALEAKKRNEGR
Ga0211601_10283671	3300020351	Marine	MKEADEAVNALRKLQELTDKYSNTEMDADELRQSISERINASEELKDVMRRALEAKKRNEGR
Ga0211611_11534573	3300020357	Marine	MTQEGEAAAKALAKLQELTNKYSTTEMDGDELRQSISERINATEELKDILKKATEAKKKR
Ga0211652_100191013	3300020379	Marine	MKEADEAAQALQRLQDLTNKYSDMEMDGEELTTSIKDRVNAAEDLKRILRDATEAKRRKDYGGN
Ga0211652_100417742	3300020379	Marine	MKEADEAARALRKLQELTDKYSNMEMTGDELKASISERINATEDLKEIIRKATEAKNKIDNYHLRS
Ga0211652_100529302	3300020379	Marine	MTQEGDEAARALRKLQDLTTKYSTTEMDGDELRQSISERINATEELKDILKKATEAKKKRDSYKQWRATD
Ga0211652_100632322	3300020379	Marine	MKEADEAAKALARLQELTDKYSNTEMDADQLRQSISERIQASEDLKDVMRRALEAKRRNETGSV
Ga0211652_100972561	3300020379	Marine	MKEADEAVDALRKLQELTDKYSNTELNADELKTSISERINATEELKDVMRRALEAKKRNEGRRV
Ga0211497_1000012433	3300020394	Marine	MSDQGTEAARALRKLQELTAKYANLEMDADQLNQSISERINATEELKEIIAKATQAKKDRERR
Ga0211497_100647203	3300020394	Marine	MKEADEAARALRKLQELTNKYSDMELDADGLKASIKDRINATEELKEIIRKATEAKRKNN
Ga0211705_100124153	3300020395	Marine	MKEADEAARALRKLQELTDKYSSTEMDADQLKQSISERINATEELKEVMRKATEAKKKNDSYHQWRASD
Ga0211705_100648773	3300020395	Marine	MNEADEAARALRKLQELTNKYSNLEMDADELNQSISERINATEELKDIIAKATQARKDRESRRS
Ga0211644_100376723	3300020416	Marine	MKEADEAARALRKLQELTDKYSNTEMDVDELKASISERVNASEELKSILKKATEEKKKRDSYHQWRASD
Ga0211653_102467912	3300020421	Marine	MKEADEAANALRKLQELTDKYSNCEMDADELKQSISERINATNDLKDIIQKATEAKAKRDSYHQWRATD
Ga0211653_103220612	3300020421	Marine	MKEADEAVNALRKLQELTDKYSNTEMDADQLRQSISERINASEELKDVMRRALEAKKRNEGR
Ga0211521_103575492	3300020428	Marine	MKEADEAVNALRKLQELTDKYSNTELNADELKTSISERINATEELKDVMRRALEAKKRNEGRRV
Ga0211576_100517952	3300020438	Marine	MKEADEAVRALRKLQELTDKYSNMEMDGDELKASISERINATEDLKEIIRKATEAKLKNN
Ga0211576_105074722	3300020438	Marine	MKEADDAVRALRKLQELTDKYSNTEMDIDQLKASISERINATNELKDIIQKATDAKKRNEGRKI
Ga0211564_1000156419	3300020445	Marine	MKEADEAAAALRKLQELTDKYSNIELDADELKQSISERINATNDLKDIIQKATEAKRKRDSYHQWRASD
Ga0211564_1000505712	3300020445	Marine	MTQEADEAARALRKLQDLTNKYSNLEMNGDELKQSISERINATEELKDIIARATQAKKDRESKLQ
Ga0211564_100157446	3300020445	Marine	MTQEGDAAAKALAKLQELTNKYSTTEMDGDELRQSISERINATEELKTILKNATEAKKKRDSYRQWRASD
Ga0211564_101037502	3300020445	Marine	MKEADEAVRALRKLQELTDKYSNTEMNADELKTSISERINATNELKDIIQKATDAKNKNEGR
Ga0211564_105754402	3300020445	Marine	LQELTDKYSNTEMNADELKTSISERINATNELKDIIQKATDAKKKNESR
Ga0211545_101211732	3300020452	Marine	MNEADEAVNALRKLQELTDKYSNTELNADELKTSISERINATEELKDVMRRALEAKRRNEGRKV
Ga0211643_102067982	3300020457	Marine	MTKEGDEAAKALAKLQELTNKYSTTEMDGDELKQSISERINATEELKTILKNATEAKKKRDSYKQWRASD
Ga0211643_106092491	3300020457	Marine	EAVNALRKLQELTDKYSNTEMDADELRQSISERINASEELKDVMRRALEAKKRNEGR
Ga0211643_106403031	3300020457	Marine	MKEADEAANALRKLQELTDKYSNTEMDADQLRQSISERINASEELKDVMRRA
Ga0211640_100361796	3300020465	Marine	MKEADEAVNALRKLQELTDKYSNTELNADELKTSISERINATEELKDVMKRALEAKKRNEGRRV
Ga0211713_100021979	3300020467	Marine	MKEADEAANALRKLQELTDKYSNCEMDADELKQSISERINATNDLKDIIQKATEAKKKRDSYHQWRASD
Ga0211713_100714961	3300020467	Marine	RMTQEGEAAAKALAKLQELTNKYSTTEMDGDELRQSISERINATEELKDILKKATEAKKKRDSYKQWRASD
Ga0211475_102148991	3300020468	Marine	MKEADEAARALRKLQELTDKYSDTELDGDELKASIAERINASEELKDILRKATEAKKKQDSSY
Ga0211614_100310453	3300020471	Marine	MKEADEAAKALRKLQELTDKYSSTEMDADQLRASISERIQASEELKEVMRKATEAKKKNDSYHQWRASD
Ga0211579_1000014627	3300020472	Marine	MTQEADEAARALRKLQELTNKYSNLEMGADELKQSISERINATEELKDILAKATQAKKDRESKLQ
Ga0211579_100262893	3300020472	Marine	MKEADEAANALRKLQELTDKYSNCEMDADELKQSISERINATNDLKDIIQKATEAKRKRDSYHQWRASD
Ga0211579_101295352	3300020472	Marine	MTQEGDEAARALRKLQELTNKYSTTEMSGDELKQSISERINATEELKDILKKATEAKKQRDSYKQWRASD
Ga0211547_105557442	3300020474	Marine	ELTDKYSNTEMDIDQLKASISERINATNELKDIIQKATDAKKRNEGR
Ga0211503_100280495	3300020478	Marine	MTQEADEAARALRKLQELTNKYSNLEMNGDELKQSISERINATEELKDIIAKATQAKKDREARYNK
Ga0211503_104991152	3300020478	Marine	ALRKLQELTAKYANLEMDADQLNQSISERINATEELKEIIAKATQAKKDRERR
Ga0208261_10040345	3300026076	Marine	MKEADEAVNALRKLQELTDKYSNTEMDAEQLKQSISERINASEELKDVMRRALEAKKRNEGR
Ga0208261_10556973	3300026076	Marine	MKEADEAAKALRKLQELTDKYSSTEMDADQLKASISERIQASEELKEVMRKATEAKKKNDSYHQWRASD
Ga0208130_11052232	3300026258	Marine	ELTAKYADMEMDADELNQSISERINATEELKNIIAKATQAKKDRERR
Ga0207993_100000944	3300026270	Marine	MSDQGTEAARALRKLQELTAKYADMEMDADELNQSISERINATEELKNIIAKATQAKKDRERR
Ga0208277_10128897	3300026292	Marine	MKEADEAVDALRKLQELTDKYSNTELNADELRTSISERINATEELKDVMRRALEAKKRNEGRRV
Ga0208277_12465132	3300026292	Marine	MKEADEAARALRKLQEVTNKYSNIEMNGEELKNSIADRINATEELKEIIRKATEAKKARESGGCP
Ga0315332_102481011	3300031773	Seawater	MTQEGDEAARALRKLQDLTTKYSTTEMDGDELRQSISERINATEELKEILKKATEAK
Ga0315331_100228032	3300031774	Seawater	MKEADEAANALRKLQELTDKYSNCELDADELKASISERINATNDLKDIIQKATEAKKRRDSYHQWRASD
Ga0315331_100255263	3300031774	Seawater	MTQEGDEAARALRKLQDLTTKYSTTEMDGDELRQSISERINATEELKEILKKATEAKKKRDSYRQWRASD
Ga0310343_102615163	3300031785	Seawater	LQELTNKYSNLEMDADELNQSISERINATEELKDIIAKATQARKDRESRRS
Ga0310344_102417192	3300032006	Seawater	MKEADEAAAALRKLQELTDKYSNTELDADELRASISERINATNDLKDIIKKATEAKKKRDSYHQWRASD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters