Metagenome Family F095603

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095603
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	47 residues
Representative Sequence	MEYPSLDTAKAGAIRFNTDSSQMEIYDGNQWTGILATSPELQTGGTR
Number of Associated Samples	61
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	95.24 %
% of genes from short scaffolds (< 2000 bps)	95.24 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (46.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (39.048 % of family members)
Environment Ontology (ENVO)	Unclassified (70.476 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.190 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.00% β-sheet: 16.00% Coil/Unstructured: 80.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF02310	B12-binding	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.33 %
Unclassified	root	N/A	46.67 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	46.67 %
Unclassified	root	N/A	46.67 %
cellular organisms	root	All Organisms → cellular organisms	6.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.76 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.90 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.71 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.86 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	1.90 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.95 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.71 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.86 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	1.90 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.95 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.71 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	2.86 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.90 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.95 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.71 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	2.86 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.90 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.95 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.71 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	2.86 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.90 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.95 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.71 %
Parcubacteria group bacterium Athens0714_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium Athens0714_16	2.86 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.90 %
Epulopiscium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Epulopiscium	0.95 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001949\|GOS2238_1010552	All Organisms → Viruses → Predicted Viral	1516	Open in IMG/M
3300001963\|GOS2229_1004500	All Organisms → Viruses → Predicted Viral	1697	Open in IMG/M
3300003185\|JGI26064J46334_1021597	Not Available	1278	Open in IMG/M
3300005074\|Ga0070431_1091887	All Organisms → Viruses → Predicted Viral	1331	Open in IMG/M
3300005404\|Ga0066856_10123221	All Organisms → Viruses → Predicted Viral	1132	Open in IMG/M
3300006345\|Ga0099693_1482224	Not Available	596	Open in IMG/M
3300006737\|Ga0098037_1267546	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	545	Open in IMG/M
3300006751\|Ga0098040_1056428	All Organisms → Viruses → Predicted Viral	1214	Open in IMG/M
3300006751\|Ga0098040_1062314	All Organisms → Viruses → Predicted Viral	1148	Open in IMG/M
3300006751\|Ga0098040_1081653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Epulopiscium	983	Open in IMG/M
3300006751\|Ga0098040_1098393	Not Available	882	Open in IMG/M
3300006751\|Ga0098040_1204751	Not Available	576	Open in IMG/M
3300009593\|Ga0115011_10065856	All Organisms → Viruses → Predicted Viral	2499	Open in IMG/M
3300009593\|Ga0115011_10248010	All Organisms → Viruses → Predicted Viral	1334	Open in IMG/M
3300009593\|Ga0115011_10360713	All Organisms → Viruses → Predicted Viral	1121	Open in IMG/M
3300009593\|Ga0115011_10936953	Not Available	728	Open in IMG/M
3300009593\|Ga0115011_11646821	Not Available	573	Open in IMG/M
3300009790\|Ga0115012_10248543	All Organisms → Viruses → Predicted Viral	1321	Open in IMG/M
3300009790\|Ga0115012_10306800	All Organisms → Viruses → Predicted Viral	1196	Open in IMG/M
3300009790\|Ga0115012_10323541	All Organisms → Viruses → Predicted Viral	1166	Open in IMG/M
3300009790\|Ga0115012_10442831	All Organisms → Viruses → Predicted Viral	1005	Open in IMG/M
3300009790\|Ga0115012_10494041	Not Available	955	Open in IMG/M
3300009790\|Ga0115012_10946906	Not Available	708	Open in IMG/M
3300009790\|Ga0115012_11704441	Not Available	549	Open in IMG/M
3300009790\|Ga0115012_11896121	Not Available	525	Open in IMG/M
3300012919\|Ga0160422_10164268	All Organisms → Viruses → Predicted Viral	1334	Open in IMG/M
3300012919\|Ga0160422_10164833	Not Available	1332	Open in IMG/M
3300012919\|Ga0160422_10239834	All Organisms → Viruses → Predicted Viral	1105	Open in IMG/M
3300012920\|Ga0160423_10217080	All Organisms → Viruses → Predicted Viral	1329	Open in IMG/M
3300012928\|Ga0163110_10280003	Not Available	1213	Open in IMG/M
3300012928\|Ga0163110_10857061	Not Available	717	Open in IMG/M
3300012950\|Ga0163108_10253765	All Organisms → Viruses → Predicted Viral	1130	Open in IMG/M
3300012950\|Ga0163108_10510967	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium Athens0714_16	776	Open in IMG/M
3300012952\|Ga0163180_10229721	Not Available	1284	Open in IMG/M
3300012953\|Ga0163179_10247843	All Organisms → Viruses → Predicted Viral	1387	Open in IMG/M
3300012953\|Ga0163179_10661488	Not Available	883	Open in IMG/M
3300012953\|Ga0163179_10830305	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium Athens0714_16	794	Open in IMG/M
3300012953\|Ga0163179_11554016	Not Available	597	Open in IMG/M
3300012954\|Ga0163111_11513916	Not Available	664	Open in IMG/M
3300012954\|Ga0163111_12197928	Not Available	558	Open in IMG/M
3300017738\|Ga0181428_1060346	Not Available	885	Open in IMG/M
3300017739\|Ga0181433_1037884	All Organisms → Viruses → Predicted Viral	1243	Open in IMG/M
3300017750\|Ga0181405_1138081	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium Athens0714_16	606	Open in IMG/M
3300017768\|Ga0187220_1164817	Not Available	669	Open in IMG/M
3300017769\|Ga0187221_1119969	Not Available	793	Open in IMG/M
3300020246\|Ga0211707_1012814	All Organisms → Viruses → Predicted Viral	1207	Open in IMG/M
3300020296\|Ga0211474_1052132	Not Available	630	Open in IMG/M
3300020297\|Ga0211490_1052844	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	709	Open in IMG/M
3300020315\|Ga0211589_1044154	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300020366\|Ga0211489_10105603	Not Available	768	Open in IMG/M
3300020387\|Ga0211590_10091109	Not Available	916	Open in IMG/M
3300020387\|Ga0211590_10112257	Not Available	827	Open in IMG/M
3300020394\|Ga0211497_10107855	All Organisms → Viruses → Predicted Viral	1119	Open in IMG/M
3300020395\|Ga0211705_10171932	Not Available	794	Open in IMG/M
3300020395\|Ga0211705_10272743	Not Available	625	Open in IMG/M
3300020405\|Ga0211496_10251542	Not Available	657	Open in IMG/M
3300020405\|Ga0211496_10294158	Not Available	606	Open in IMG/M
3300020408\|Ga0211651_10082604	All Organisms → Viruses → Predicted Viral	1352	Open in IMG/M
3300020411\|Ga0211587_10070868	All Organisms → Viruses → Predicted Viral	1551	Open in IMG/M
3300020411\|Ga0211587_10105771	All Organisms → Viruses → Predicted Viral	1218	Open in IMG/M
3300020411\|Ga0211587_10168196	Not Available	926	Open in IMG/M
3300020420\|Ga0211580_10087386	All Organisms → Viruses → Predicted Viral	1311	Open in IMG/M
3300020436\|Ga0211708_10094137	All Organisms → Viruses → Predicted Viral	1169	Open in IMG/M
3300020436\|Ga0211708_10098802	All Organisms → Viruses → Predicted Viral	1141	Open in IMG/M
3300020442\|Ga0211559_10134563	Not Available	1181	Open in IMG/M
3300020442\|Ga0211559_10176084	Not Available	1014	Open in IMG/M
3300020442\|Ga0211559_10204947	Not Available	931	Open in IMG/M
3300020451\|Ga0211473_10341319	Not Available	768	Open in IMG/M
3300020457\|Ga0211643_10063361	All Organisms → Viruses → Predicted Viral	1832	Open in IMG/M
3300020457\|Ga0211643_10133502	All Organisms → Viruses → Predicted Viral	1223	Open in IMG/M
3300020459\|Ga0211514_10159404	All Organisms → Viruses → Predicted Viral	1117	Open in IMG/M
3300020463\|Ga0211676_10352029	Not Available	821	Open in IMG/M
3300020465\|Ga0211640_10216486	All Organisms → Viruses → Predicted Viral	1077	Open in IMG/M
3300020468\|Ga0211475_10153823	All Organisms → Viruses → Predicted Viral	1173	Open in IMG/M
3300020470\|Ga0211543_10108423	All Organisms → Viruses → Predicted Viral	1415	Open in IMG/M
3300020472\|Ga0211579_10157824	All Organisms → Viruses → Predicted Viral	1333	Open in IMG/M
3300020473\|Ga0211625_10598005	Not Available	536	Open in IMG/M
3300020474\|Ga0211547_10352659	Not Available	744	Open in IMG/M
3300022074\|Ga0224906_1063432	All Organisms → Viruses → Predicted Viral	1153	Open in IMG/M
3300025118\|Ga0208790_1065976	All Organisms → Viruses → Predicted Viral	1107	Open in IMG/M
3300025118\|Ga0208790_1078387	Not Available	991	Open in IMG/M
3300025127\|Ga0209348_1062531	All Organisms → Viruses → Predicted Viral	1224	Open in IMG/M
3300025127\|Ga0209348_1063032	All Organisms → Viruses → Predicted Viral	1217	Open in IMG/M
3300025127\|Ga0209348_1123896	Not Available	781	Open in IMG/M
3300025127\|Ga0209348_1187908	Not Available	585	Open in IMG/M
3300025132\|Ga0209232_1192122	Not Available	628	Open in IMG/M
3300025151\|Ga0209645_1039847	All Organisms → Viruses → Predicted Viral	1692	Open in IMG/M
3300026077\|Ga0208749_1031052	All Organisms → Viruses → Predicted Viral	1129	Open in IMG/M
3300026077\|Ga0208749_1098420	Not Available	609	Open in IMG/M
3300026292\|Ga0208277_1172871	Not Available	707	Open in IMG/M
3300027830\|Ga0209359_10108111	All Organisms → Viruses → Predicted Viral	1179	Open in IMG/M
3300027906\|Ga0209404_10139915	All Organisms → Viruses → Predicted Viral	1464	Open in IMG/M
3300027906\|Ga0209404_10173808	All Organisms → Viruses → Predicted Viral	1323	Open in IMG/M
3300027906\|Ga0209404_10180647	All Organisms → Viruses → Predicted Viral	1299	Open in IMG/M
3300027906\|Ga0209404_10198046	All Organisms → Viruses → Predicted Viral	1244	Open in IMG/M
3300027906\|Ga0209404_10235274	All Organisms → Viruses → Predicted Viral	1149	Open in IMG/M
3300027906\|Ga0209404_10917940	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	598	Open in IMG/M
3300029787\|Ga0183757_1010485	All Organisms → Viruses → Predicted Viral	2639	Open in IMG/M
3300029792\|Ga0183826_1065545	Not Available	550	Open in IMG/M
3300031774\|Ga0315331_10435447	Not Available	956	Open in IMG/M
3300031785\|Ga0310343_10955729	Not Available	647	Open in IMG/M
3300032073\|Ga0315315_10277540	All Organisms → Viruses → Predicted Viral	1562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.05%
Porifera	Host-Associated → Porifera	0.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.05%
Unclassified	Host-Associated → Porifera → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	56.19%
Unclassified	Environmental → Aquatic → Marine → Unclassified	34.29%
Strait	Environmental → Aquatic → Marine → Strait	5.71%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.86%
Unclassified	Host-Associated → Porifera → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	44.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	34.29%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	10.48%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	5.71%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.86%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	0.95%
Unclassified	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	39.05%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	34.29%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	5.71%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	4.76%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	4.76%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	4.76%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.90%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.95%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.95%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	0.95%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.95%
Marine Benthic Sponge Stylissa Massa Associated	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Marine Benthic Sponge Stylissa Massa Associated	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001949	Marine microbial communities from Panama City, Panama - GS022	Environmental	Open in IMG/M
3300001963	Marine microbial communities from Nags Head, North Carolina, USA - GS013	Environmental	Open in IMG/M
3300003185	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300005074	Marine benthic sponge Stylissa massa associated microbial communities from Guam, USA	Host-Associated	Open in IMG/M
3300005404	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205	Environmental	Open in IMG/M
3300006329	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0500m	Environmental	Open in IMG/M
3300006345	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0075m	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300020246	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX555934-ERR599105)	Environmental	Open in IMG/M
3300020296	Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX556002-ERR599140)	Environmental	Open in IMG/M
3300020297	Marine microbial communities from Tara Oceans - TARA_B000000437 (ERX555970-ERR598979)	Environmental	Open in IMG/M
3300020315	Marine microbial communities from Tara Oceans - TARA_B100000405 (ERX555948-ERR598972)	Environmental	Open in IMG/M
3300020366	Marine microbial communities from Tara Oceans - TARA_B000000437 (ERX556091-ERR599146)	Environmental	Open in IMG/M
3300020387	Marine microbial communities from Tara Oceans - TARA_B100000405 (ERX556119-ERR599023)	Environmental	Open in IMG/M
3300020394	Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)	Environmental	Open in IMG/M
3300020395	Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX555987-ERR599133)	Environmental	Open in IMG/M
3300020405	Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)	Environmental	Open in IMG/M
3300020408	Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020459	Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX555913-ERR599095)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020465	Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)	Environmental	Open in IMG/M
3300020468	Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300020473	Marine microbial communities from Tara Oceans - TARA_B100000700 (ERX555932-ERR598948)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300026077	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026292	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205 (SPAdes)	Environmental	Open in IMG/M
3300027830	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300029792	Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2238_10105523	3300001949	Marine	MEYPSLDTAKAGAMRFNTDSLQMEIYNGFEWTGIES
GOS2229_10045003	3300001963	Marine	MEKPSLDTAKAGAIRFNTDSSQMEIYDGNQWTGILGT
JGI26064J46334_10215971	3300003185	Marine	MEYPSLDTAKAGAMRFNTDSNQLEIYDGNQWTGIEATSPELQTGGTRGIVFGEQSN
Ga0070431_10918871	3300005074	Marine Benthic Sponge Stylissa Massa Associated	MEKPSLDTAKAGAIRFNTDSSQMEIYDGNQWTGILSTSPELQTGGT
Ga0066856_101232212	3300005404	Marine	MEYPSLDKPTAGAFRFNTDRSQLEIYDGNQWTGLVSDSPELQTGGTRGLQGGGEAPGD
Ga0068486_10625372	3300006329	Marine	MEYPSLDTAKAGAIRFNTDSSQLEIYDGNQWTGILATSPELQTGGTRGFIVGGYTNAPVSAYGEISYYNIL*
Ga0099693_14822241	3300006345	Marine	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILATSPEQQTGGTRGLFYGGNT
Ga0098037_12675462	3300006737	Marine	MEYPSLDKPKAGAMRFNTDSNQMEIYDGNQWAGILSTSPELQT
Ga0098040_10564281	3300006751	Marine	MEYPSLDTPTAGAFRFNTDSSQLEIYDGNQWTGVLATSPELQTGGTRGV
Ga0098040_10623142	3300006751	Marine	MEYPSLDKPTAGAFRFNTDSSQLEIYDGNQWTVISATSPDLLTGGTRGFFAGG
Ga0098040_10816532	3300006751	Marine	MEYPSLDTPTAGAFRFNTDSNQLEIYDGNQWTGVLATSPELQ
Ga0098040_10983931	3300006751	Marine	MEYPSLDKPKAGAFRFNTDSSQLEIYDGNQWTGVLATSPEVQTGGTRG
Ga0098040_12047511	3300006751	Marine	MTIEYPSLDTPTAGAFRYNTDSSQLEIYDGNQWTGVLSTS
Ga0115011_100658563	3300009593	Marine	MEYPSLDKPNAGAFRFNTDSSQLEIYDGNQWTGVLATSPELQTGGTRGLIMGRYVNP
Ga0115011_102480102	3300009593	Marine	MEYPSLDKPTAGAFRFNTDSSQMEIYNGFEWTGVLSTSP
Ga0115011_103607132	3300009593	Marine	MEYPSFDKPTAGAFRFNTDSSQMEIYDGNKWTGILSTS
Ga0115011_109369532	3300009593	Marine	MEYPSLKNPTAGAFRFNTDSSQLEIYDGNQWTGVSS
Ga0115011_116468212	3300009593	Marine	MEYPSLDKPTAGAFRFNTDSSQLEIYDGNQWTGVLATSPELQTGGTRGLIMGRYVNPTGYDD
Ga0115012_102485431	3300009790	Marine	MEYPSLDKPKAGAFRFNTDSSQLEIYDGNQWTGILATSPEQQTGGTRGLMLGGY
Ga0115012_103068001	3300009790	Marine	MEYPSLDKPTAGAFRFNTDSSQLEIYDGNQWTGVLATSPEQQTGGTRGIL
Ga0115012_103235412	3300009790	Marine	MEYPSLDKPKAGAFRFNTDSSQLEIYDGNQWTGVLATSP
Ga0115012_104428311	3300009790	Marine	MEYPSLDKPNAGAFRFNTDSNQLEIYDGNQWTGVLATSPEQQTGGTRG
Ga0115012_104940411	3300009790	Marine	MEKPSLDTAKAGAFRFNTVSSQLEIYDGNQWTGILGDSPHL
Ga0115012_106421552	3300009790	Marine	MEYPSLDKPTAGATRFNTDSSQLEIYDGNQWTGILATSPAEQTGGTRGVIFGGYVANDQIGWINIT
Ga0115012_109469061	3300009790	Marine	MEKPSLDTAKAGATRFNTDLTQLEIYDGYQWTCVLA
Ga0115012_117044412	3300009790	Marine	MEKPSLDTAKAGAMRFNTDSSQLEIYDGNQWTGILATSPELHTGGTRGIQAGG
Ga0115012_118961211	3300009790	Marine	MEYPSLDKPKAGATRFNTDSSQLEIYDGNQWTGILATSPDQQTGGT
Ga0160422_101642681	3300012919	Seawater	MEKPSLDTAKAGAIRFNTDSSQMEIYDGNQWTGVLGTSPEQQTGGTRG
Ga0160422_101648332	3300012919	Seawater	MEKPSLDTAKAGAIRFNTDSSQMEIYDGNQWTGVLGTSPEQQTGGTRGI
Ga0160422_102398342	3300012919	Seawater	MEKPSLDKLNAGAIRFNTDSSQMEIYDGNQWTGILATSPELQTGGTR
Ga0160423_102170801	3300012920	Surface Seawater	MEKPSLDTAKAGAIRFNTDSSQMEIYDGNQWTGVLATSPFQQTGGTRGIFHGGGDP
Ga0163110_102800031	3300012928	Surface Seawater	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILATSPQ
Ga0163110_108570612	3300012928	Surface Seawater	MEYPSLDTANAGAIRFNTDSSQLEIYDGNQWTGIEATSTFLQTGGTRGLIMGGIISGRSN
Ga0163108_102537651	3300012950	Seawater	MEYPSLDTPTAGAFRFNTDSNQLEIYDGNQWTGVLATSPE
Ga0163108_105109671	3300012950	Seawater	MEYPSLDTPTAGAFRFNTDSNHLEIYDGNQWTGVLATSPELQTGGTRGV
Ga0163180_102297211	3300012952	Seawater	MEKPSLDTAKAGAMRFNTDSSQLEIYDGNQWTGILATSTEHQTGGTRGLF
Ga0163179_102478432	3300012953	Seawater	MEKPSLDTAKAGAMRFNTDSSQLEIYDGNQWTGILATSTEHQTGGTRGLFFGGEGSNPRN
Ga0163179_106614882	3300012953	Seawater	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILATSP
Ga0163179_108303051	3300012953	Seawater	MEYASSNTAKAGAIRFNTDSIQMEIYDGNQWTGVLATSPELHTGGTRGLWMGGEPLTSTVSFRSLETTG
Ga0163179_115540161	3300012953	Seawater	MEYPSLDKPKAGAMRFNTDSSQMEIYDGNQWTGILA
Ga0163111_115139162	3300012954	Surface Seawater	MEYPSLDKPTAGATRFNTDSSQLEIYDGNQWTGILATSPEQQTGGTR
Ga0163111_121979282	3300012954	Surface Seawater	MEKPSLDTAKAGAIRFNTDSSQMEIYDGNQWTGILATSP
Ga0181428_10603462	3300017738	Seawater	MEYPSLDKPKAGAMRFNTDSSQLEIYDGNQWTGILA
Ga0181433_10378842	3300017739	Seawater	MEYPSLDKPKAGAMRFNTDSSQMEIYDGNQWTGILATSPELQTGGTRGLFH
Ga0181405_11380811	3300017750	Seawater	MDIEYPSLDKPTAGAFRFNTDSSQLEIYDGNQWTGVLATSSEQQTGATRGIKMGGGYPNGTD
Ga0187220_11648171	3300017768	Seawater	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILGTSPQQQTGGTRGLFFGGEGSNPRNTI
Ga0187221_11199692	3300017769	Seawater	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILGTSPNQQTGG
Ga0211707_10128141	3300020246	Marine	MEYPSLNTAKAGAIRFNTDSSQLEIYDGNQWTGIE
Ga0211474_10521322	3300020296	Marine	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILATSSELHTGGTRGL
Ga0211490_10528441	3300020297	Marine	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILATSAELQTGANRGIV
Ga0211589_10441542	3300020315	Marine	MEKPSLDTAKAGAMRFNTDSTQLEIYDGNQWTGILGTSPEL
Ga0211489_101056031	3300020366	Marine	MEKPSLDTAKAGAIRFNTDRSQMEIYDGNQWTGILATSPHLHTGG
Ga0211590_100911091	3300020387	Marine	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILGDSPELQ
Ga0211590_101122571	3300020387	Marine	MEKPSLDTAKAGAFRFNTDSSQMEIYDGNQWTGILATSPDQQTGGTRGLW
Ga0211497_101078552	3300020394	Marine	MEYPSLDRPKAGAFRFNTDSNQLEIYDGNQWTGIES
Ga0211705_101719322	3300020395	Marine	MEYPSLDKPIAGAFRFNTDSNQLEIYDGNQWTGVLATSPEQQTGGTRALVGGGY
Ga0211705_102727432	3300020395	Marine	MEHPSSDKLKAGAFRFNTDSSQLEIYDGNQWTGVLATSPEQQTGGTRGLIAGGYDHDTSD
Ga0211496_102515422	3300020405	Marine	MEKSSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILSNAGELLTGGVRG
Ga0211496_102941581	3300020405	Marine	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILATSPDQQTGGTRG
Ga0211651_100826041	3300020408	Marine	MEYPSLDTANAGAIRFNTDSSQMEIYNGFEWTGIESTSPELQTGGTR
Ga0211587_100544711	3300020411	Marine	MEYPSLDKPKAGAFRFNTDSSQLEIYDGNQWTGVLATSPEQQTGGTRGFILGGYANAPVSAYGEIS
Ga0211587_100708683	3300020411	Marine	MEYPSLDKPKAGATRFNTDSSQLEIYDGNQWTGILATSP
Ga0211587_101057711	3300020411	Marine	MEKPSLDTAKAGAIRFNTDSGQLEFYDGNQWTGILSTSTFLQTG
Ga0211587_101681961	3300020411	Marine	MEYPSLDIPKAGAIRFNTDSSQLEIYDGNQWAGVLATSPEQ
Ga0211580_100873862	3300020420	Marine	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWVGILATSGELLTGGTRGFFAGGNSTNIEF
Ga0211708_100941372	3300020436	Marine	MEKPSLDKLKAGAMRFNTDSSQMEIYDGNQWTGILATSSEQQTD
Ga0211708_100988021	3300020436	Marine	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILGTSP
Ga0211559_101345632	3300020442	Marine	MEKPSLDKAKAGAVRFNTDSSQLEIYDGNQWTGILATSPHLHTGGTR
Ga0211559_101760841	3300020442	Marine	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILGTSGALQTGGSRGINFSGSS
Ga0211559_102049471	3300020442	Marine	MEKPSLDTAKAGAIRFNTDLSQMEIYDGNQWTGILGTSPELQTGGTR
Ga0211473_103413192	3300020451	Marine	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILATSPEQ
Ga0211643_100633613	3300020457	Marine	MEYPSLDKPIAGAFRFNTDSSQLEIYDGNQWTGVLSTSSEQQTGGTRGIFAGN
Ga0211643_101335022	3300020457	Marine	MEYPSFDKPIAGAFRFNTDSSQLEIYDGNQWTGVMSSYTPEQQTGGTRGLFG
Ga0211514_101594041	3300020459	Marine	MEYPSLDKPKAGAFRFNTDSGQLEIYDGNQWTGVLSTSPELQTGGTRGVYGGGNASPVWGTKIDYIN
Ga0211676_103520292	3300020463	Marine	MEKPSLDTAKAGAMRFNTDLSQLEIYDGNQWTGILATSTELQTGGTRGLRMGGNTVDVID
Ga0211640_102164862	3300020465	Marine	MEYPSLDNPTAGAFRFNTDSSQLEIYDGNQWTGVLATSPEQQTG
Ga0211475_101538231	3300020468	Marine	MEYPSLDTAKAGAIRFNTDSSQMEIYDGNQWTGILATS
Ga0211543_101084231	3300020470	Marine	MEYPSLDTAKAGAIRFNTDSSQLEIYDGNQWTGILGTS
Ga0211579_101578242	3300020472	Marine	MEYPSLDKPIAGAFRFNTDSSQLEIYDGNQWTGVLATSPEQQTGGTRGLFTGGYKVGSVTNVIDYVT
Ga0211625_105980052	3300020473	Marine	MEYPSLDKPKAGAFRFNTDSSQLEIYDGNRWAGVL
Ga0211547_103526591	3300020474	Marine	MEKPSLDTAKAGAMRFNTDSSQLEIYNGNQWTGILATSSHQ
Ga0224906_10634322	3300022074	Seawater	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILGTS
Ga0208790_10659761	3300025118	Marine	MEYPSLDTPTAGAFRFNTDSNHLEIYDGNQWTGVLATSPELQTGGTRGVWGGGNQHPSYKDTI
Ga0208790_10783872	3300025118	Marine	MEYPSLDTPTAGAFRFNTDSSQLEIYDGNQWTGVLATSPELQTGGTRGVWGGGNQ
Ga0209348_10625311	3300025127	Marine	MEKPSLNTAKAGAIRFNTDSSQMEIYDGNQWTGILATSPEQQTG
Ga0209348_10630321	3300025127	Marine	MEKPSLDTAKAGAMRFNTDLSQLEIYDGNQWVNVLSTSPDIQTGGTFAFCG
Ga0209348_11238961	3300025127	Marine	MEYPSLDTAKAGATRFNTDSLQLEIYDGNQWTGIEATSPFLQTGGTRGLF
Ga0209348_11879081	3300025127	Marine	MEKPSLDTAKAGAIRFNTDSSQLEIYDGNQWTGIISTSPNLHTGGTRGLWGGGEPL
Ga0209232_11921222	3300025132	Marine	MEYPSLDKPKAGAFRFNTDSSQLEIYDGNQWTGVLATSPEQQTGGTRGLFMGGDPG
Ga0209645_10398473	3300025151	Marine	MEYPSLDTAKAGAIRFNTDSSQMEIYDGNQWTGILATSPELQTGGG
Ga0208749_10310522	3300026077	Marine	MEYPSLDKPKAGATRFNTDSSQLEIYDGNQWTGVLATSPE
Ga0208749_10984201	3300026077	Marine	MEYPSLDKPNAGAFRFNTDSNQLEIYDGNQWTGVLATSPEQQ
Ga0208277_11728712	3300026292	Marine	MEYPSLDKPNAGAFRFNTDSSQMEIYDGNQWTGVLATSPELHTG
Ga0209359_101081111	3300027830	Marine	MEKPSLDTAKAGAIRFNTDSSQMEIYDGNQWTGILGTSPNQQTGGTRGLRM
Ga0209404_101399153	3300027906	Marine	MEYPSLDKPTAGATRFNTDSSQLEIYDGNQWTGVLATSPN
Ga0209404_101738081	3300027906	Marine	MEYPSLDKPKAGAFRFNTDSSQMEIYDGNQWTGVLSTSPEQQT
Ga0209404_101806471	3300027906	Marine	MEYPSLDKPTAGAFRFNTDSSQLEIYNGFEWTGVL
Ga0209404_101980461	3300027906	Marine	MEYPSLDKPKAGAFRFNTDSSQLEIYDGNQWTVVLSTSPEQQTGGT
Ga0209404_102352741	3300027906	Marine	MEYPSLDKPTAGATRFNTDSSQLEIYDGNQWTGVLATSSELQTGGTRG
Ga0209404_109179402	3300027906	Marine	MENPSLDKPTPGAIRFNTDRSQLEIYDGNQWTGVE
Ga0183757_10104854	3300029787	Marine	MEYPSLDTAKAGAIRFNTDSSQMEIYDGNQWTGILATSPELQTGGTR
Ga0183826_10655452	3300029792	Marine	MEKPSLDTAKAGAMRFNTDSSQMEIYDGNQWTGILATSG
Ga0315331_104354472	3300031774	Seawater	MEYPSLDKPTAGAFRFNTDSSQLEIYDGNQWTGVLS
Ga0310343_109557291	3300031785	Seawater	MEYPSLDKAKAGAMRFNTDSSQMEIYDGNQWTGIKSTSP
Ga0315315_102775403	3300032073	Seawater	MEKPSLDTAKAGAMRFNTDSSQLEIYDGNQWTGILGTS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095603

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences