Metagenome Family F095599

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095599
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	61 residues
Representative Sequence	MTKIAPKTTKEHIVNIYNKIELLETNHIHHLQKEVRKLNYVLWTIGFMVATQFIAWVLRMVG
Number of Associated Samples	65
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.00 %
% of genes near scaffold ends (potentially truncated)	17.14 %
% of genes from short scaffolds (< 2000 bps)	65.71 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (61.905 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (42.857 % of family members)
Environment Ontology (ENVO)	Unclassified (85.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.238 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66. 1BBAY92_101561592 2BBAY93_101246752 3ACM6_10284072 4GOS2238_10230684 5KVRMV2_1017890892 6KVWGV2_103766974 7JGI25127J35165_10033735 8JGI25127J35165_10201904 9JGI25128J35275_10008006 10Ga0068500_12670665 11Ga0099675_10889852 12Ga0099955_10219441 13Ga0098038_100705211 14Ga0098038_10432682 15Ga0098038_11865031 16Ga0098037_12122972 17Ga0098042_10116474 18Ga0098042_10247582 19Ga0098041_11804971 20Ga0098036_11041563 21Ga0098043_10401785 22Ga0098043_10601151 23Ga0098043_12230552 24Ga0098049_10565944 25Ga0098059_13172291 26Ga0160422_100986805 27Ga0160422_101865752 28Ga0160422_111011721 29Ga0160423_100360456 30Ga0160423_100463477 31Ga0160423_100693363 32Ga0160423_100779784 33Ga0160423_100821303 34Ga0160423_101073945 35Ga0160423_102491532 36Ga0160423_102709552 37Ga0160423_103969173 38Ga0160423_104913832 39Ga0160423_109282432 40Ga0163109_1006593710 41Ga0163111_125558532 42Ga0181373_10375221 43Ga0181398_10081129 44Ga0181401_100051824 45Ga0181433_100574512 46Ga0181421_11529231 47Ga0181382_11630243 48Ga0181413_12564032 49Ga0181425_12797113 50Ga0181386_11137082 51Ga0181575_106699942 52Ga0211484_10795062 53Ga0211658_10503602 54Ga0211621_10338432 55Ga0211616_10698091 56Ga0211485_10825582 57Ga0211666_103915161 58Ga0211617_100125346 59Ga0211617_100799382 60Ga0211617_102397182 61Ga0211659_102521262 62Ga0211668_100366445 63Ga0211699_100020327 64Ga0211699_100458833 65Ga0211702_100162583 66Ga0211620_102150673 67Ga0211622_101587912 68Ga0211622_103726192 69Ga0211565_1000182416 70Ga0211708_100288412 71Ga0211708_103084402 72Ga0211708_104957792 73Ga0211539_101755653 74Ga0211558_100135351 75Ga0211558_1001845515 76Ga0211559_105462812 77Ga0211641_100362082 78Ga0211641_102459103 79Ga0211664_100005222 80Ga0211475_102641683 81Ga0211614_101951011 82Ga0211614_105588782 83Ga0208157_11164771 84Ga0208157_11449882 85Ga0208159_100555810 86Ga0209348_10087237 87Ga0209348_10483344 88Ga0208919_10110983 89Ga0209645_10196854 90Ga0135227_10081702 91Ga0183683_10002735 92Ga0183683_100055725 93Ga0183683_10009329 94Ga0183683_10027004 95Ga0183683_10079655 96Ga0183683_10082362 97Ga0183683_10087882 98Ga0183683_10093933 99Ga0183683_10147433 100Ga0183683_10281283 101Ga0183683_10290923 102Ga0185543_10314503 103Ga0185543_10334853 104Ga0183748_10027889 105Ga0310343_104702963
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66. 1BBAY92_101561592 2ACM6_10284072 3GOS2238_10230684 4Ga0068500_12670665 5Ga0098041_11804971 6Ga0098043_10601151 7Ga0160423_102709552 8Ga0181575_106699942 9Ga0211666_103915161
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66. 1BBAY92_101561592 2ACM6_10284072 3GOS2238_10230684 4Ga0068500_12670665 5Ga0098041_11804971 6Ga0098043_10601151 7Ga0160423_102709552 8Ga0181575_106699942 9Ga0211666_103915161
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 83.87% β-sheet: 0.00% Coil/Unstructured: 16.13%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00959	Phage_lysozyme	36.19
PF11351	GTA_holin_3TM	19.05
PF08291	Peptidase_M15_3	2.86
PF14090	HTH_39	0.95
PF08401	ArdcN	0.95
PF00673	Ribosomal_L5_C	0.95
PF00622	SPRY	0.95
PF05133	Phage_prot_Gp6	0.95
PF08774	VRR_NUC	0.95

Showing 1 to 9 of 9 entries

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COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0094	Ribosomal protein L5	Translation, ribosomal structure and biogenesis [J]	0.95
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	33.33 %
Unclassified	root	N/A	61.90 %
unclassified Hyphomonas	no rank	unclassified Hyphomonas	4.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	18.10 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.76 %
Unclassified	root	N/A	61.90 %
Viruses	superkingdom	All Organisms → Viruses	15.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	18.10 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.86 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Unclassified	root	N/A	61.90 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.95 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.86 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Unclassified	root	N/A	61.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.95 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Unclassified	root	N/A	61.90 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.86 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.95 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.86 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.95 %
Unclassified	root	N/A	61.90 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.86 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.95 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.95 %
Unclassified	root	N/A	61.90 %

Name	Rank	Taxonomy	Distribution
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.95 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.76 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Unclassified	root	N/A	61.90 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	0.95 %

Name	Rank	Taxonomy	Distribution
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.95 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.76 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	0.95 %
Unclassified	root	N/A	61.90 %

Name	Rank	Taxonomy	Distribution
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.76 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	0.95 %
Unclassified	root	N/A	61.90 %
Xanthomarina	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina	0.95 %

Name	Rank	Taxonomy	Distribution
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.76 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	0.95 %
Unclassified	root	N/A	61.90 %
Xanthomarina gelatinilytica	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	0.95 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000947\|BBAY92_10156159	Not Available	599	Open in IMG/M
3300000973\|BBAY93_10124675	Not Available	651	Open in IMG/M
3300001832\|ACM6_1028407	Not Available	919	Open in IMG/M
3300001949\|GOS2238_1023068	unclassified Hyphomonas → Hyphomonas sp.	1269	Open in IMG/M
3300002231\|KVRMV2_101789089	Not Available	582	Open in IMG/M
3300002242\|KVWGV2_10376697	Not Available	939	Open in IMG/M
3300002482\|JGI25127J35165_1003373	All Organisms → cellular organisms → Bacteria	4297	Open in IMG/M
3300002482\|JGI25127J35165_1020190	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300002488\|JGI25128J35275_1000800	All Organisms → Viruses	9709	Open in IMG/M
3300006332\|Ga0068500_1267066	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1446	Open in IMG/M

Showing 1 to 10 of 105 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.10%
Host-Associated	Host-Associated	1.90%

Habitat	Taxonomy	Distribution
Algae	Host-Associated → Algae	1.90%
Aquatic	Environmental → Aquatic	98.10%

Habitat	Taxonomy	Distribution
Green Algae	Host-Associated → Algae → Green Algae	1.90%
Marine	Environmental → Aquatic → Marine	98.10%

Habitat	Taxonomy	Distribution
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	1.90%
Harbor	Environmental → Aquatic → Marine → Harbor	0.95%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.95%
Oceanic	Environmental → Aquatic → Marine → Oceanic	43.81%
Strait	Environmental → Aquatic → Marine → Strait	7.62%
Unclassified	Environmental → Aquatic → Marine → Unclassified	42.86%

Habitat	Taxonomy	Distribution
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	18.10%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.95%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	1.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	42.86%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	25.71%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	7.62%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Harbor → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	1.90%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	42.86%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	23.81%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	2.86%
Marine Harbor	Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor	0.95%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.95%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	1.90%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.95%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	7.62%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	2.86%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.95%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	12.38%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000947	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92	Host-Associated	Open in IMG/M
3300000973	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93	Host-Associated	Open in IMG/M
3300001832	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM6, ROCA_DNA131_0.2um_27b	Environmental	Open in IMG/M
3300001949	Marine microbial communities from Panama City, Panama - GS022	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002242	Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300006332	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0200m	Environmental	Open in IMG/M
3300006334	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025m	Environmental	Open in IMG/M

Showing 1 to 10 of 65 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BBAY92_101561592	3300000947	Macroalgal Surface	MTKIAPKTTKEHIVNIYNKIELLETNHIHHLQKEVRKLNYVLWTIGFMVATQFIAWVLRMVG*
BBAY93_101246752	3300000973	Macroalgal Surface	TTKEHIVNIYNKIELLETNHIHHLQKEVRKLNYVLWTIGFMVATQFIAWVLRMVG*
ACM6_10284072	3300001832	Marine Plankton	MLQALIGPVTGLHLVNLYNKIEHLETNHIYHLQKEVKKLNYVLWAVGFMVGTQFIAFVLSRIEWI*
GOS2238_10230684	3300001949	Marine	TSKEHLVNLYNKIEHLETNHIYHLQKEVKKLNYVLWAIGFMVATQFIAFVLQRVQWI*
KVRMV2_1017890892	3300002231	Marine Sediment	MTKITPKTTKEHIINIYNKIELLETNHIHHLQKEVRKLNYVLWTIGFMVATQFIAFVLRMLG*
KVWGV2_103766974	3300002242	Marine Sediment	MTKITPKTTKEHIINIYNKIELLETKHIHHLQKEVRKLNYVLWTIGFMVATQFIAFVLRMLG*
JGI25127J35165_10033735	3300002482	Marine	MTKIAPKTTKEHIVNIYNKIEVLETNHIWHLQRSIQRLNYVLWTVGFMVATQFISWVLRMVG*
JGI25127J35165_10201904	3300002482	Marine	MTKIAPXTTKEHIVNIYXKIEXLETNHIXHLQKXVRKLNYVLWTIGFMVTTQFIAWVLRMVG*
JGI25128J35275_10008006	3300002488	Marine	MNKITPKTTKEHIVNIYNKIELLETNHIHHLQIEVKKLNRILYGIGFMVATQFIAWILRMVG*
Ga0068500_12670665	3300006332	Marine	MAKLEPKTTKEHIANIYNKIEQLETNHIFHLQKDVKRLNFVLMTIGFMVASQFIAMIIKVLG*
Ga0099675_10889852	3300006334	Marine	MTKILPKTTKEHIINIYNKIELLESNHISHLQKEVRKLNYVLWTIGFMVATQFIAFVLRMIG*
Ga0099955_10219441	3300006412	Marine	MAKLEPKTTKEHIANIYNKIEQLETNHIFHLQKDVKRLNFVLMTIGFMVASQFIAMIIKVLE*
Ga0098038_100705211	3300006735	Marine	MSKITPKTTKEHIVNIYNKIELLETNHIHHLQLEVKKLNRILYGIGFMVATQFIAWVLRMVQ*
Ga0098038_10432682	3300006735	Marine	MSKIEPTTTKEHIVNIYNKIEQLETNHIHHLQKDVKKLNYILITIGFMVASQFIAMILKVVE*
Ga0098038_11865031	3300006735	Marine	MSKITPKTTKEHIINIYNKIELLETNHIHHLQKEVRKLNYVLWTIGFMVATQFIAWVLRMIG*
Ga0098037_12122972	3300006737	Marine	MTKITPKTTKEHIVNIYNKIELLETNHIFHLQQEVKKLNRILYAIGFMVATQFIAWGLKFFN*
Ga0098042_10116474	3300006749	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIHHLQLEVKKLNRILYAIGFMVATQFIAWGLKFFS*
Ga0098042_10247582	3300006749	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIWHLQREVRKLNYVLWTVGFMVATQFIAWVLRMVG*
Ga0098041_11804971	3300006928	Marine	MNKITPKTTKEHIVNIYNKIELLETNHIHHLQIEVKKLNRILYGIGFMVAT
Ga0098036_11041563	3300006929	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIHHLQIEVKKLNRILYGIGFMVATQFIAWILRMVG*
Ga0098043_10401785	3300010148	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIHHLQMEVKKLNRILYGIGFMVATQFIAWILRMVG*
Ga0098043_10601151	3300010148	Marine	TKEHIVNIYNKIEQLETNHIYHLQKEVKRLNYVLWTVGFMVASQFIAMILKVFQ*
Ga0098043_12230552	3300010148	Marine	MNKIVPKTTKEHIVNIYNKIEQLESNHIWHLQRDLKRLNYVLWTIGFMVATQFIAWVLRMVG*
Ga0098049_10565944	3300010149	Marine	MNKITPKTTKEHIVNIYNKIELLETNHIHHLQMEVKKLNRILYGIGFMVATQFIAWILRMVG*
Ga0098059_13172291	3300010153	Marine	TKEHIVNIYNKIELLETNHIHHLQIEVKKLNRILYGIGFMVATQFIAWILRMVG*
Ga0160422_100986805	3300012919	Seawater	MTKIAPKTTKEHIVNIYNKIELLETNHIHHLQKEVRKLNYVLWTIGFMVTTQFI
Ga0160422_101865752	3300012919	Seawater	MAKLEPRTSKEHLVNLYNKIEHLETNHIYHLQKEVKKLNYVLWAIGFMVGTQFIAFVLSRLQWI*
Ga0160422_111011721	3300012919	Seawater	SKEHLVNLYNKIENLETNHIYHLQKEVKKLNYVLWAIGFMVATQFIAFLLQRF*
Ga0160423_100360456	3300012920	Surface Seawater	MAKLEPKTSKEHLVNLYNKIENLETNHIYHLQKEVKKLNYVLWAVGFMVGTQFIAFVLSRVEWI*
Ga0160423_100463477	3300012920	Surface Seawater	MAKIEPKTTKEHLVNIYNKIELIESNHIYHLQKEVKKLNYVLWAIGFMVATQFIAFLLQRF*
Ga0160423_100693363	3300012920	Surface Seawater	MSKITPKTTKEHIVNIYNKIELLETNHIYHLQKEVRKLNYILWTIGFMVATQFISWVLRMVG*
Ga0160423_100779784	3300012920	Surface Seawater	MAKIEPKTTKEHLVNIYNKIELIQSNHIYHLQKEVKKLNYVLWAIGFMVATQFIAFVLQRF*
Ga0160423_100821303	3300012920	Surface Seawater	MSKITPKTTKEHIVNIYNKIDLLETNHIYHLQQEVKKLNRILYGIGFMVATQFIAWGLKFFN*
Ga0160423_101073945	3300012920	Surface Seawater	MSKITPKTTKEHIVNIYNKIELLETNHIYHLQKEVRKLNYILWTIGFMVATQFISWILRMVG*
Ga0160423_102491532	3300012920	Surface Seawater	MGKLEPKTSKEHLVNLYNKIENLETNHIYHLQKEVKKLNYVLWAIGFMVATQFIAFLLQRF*
Ga0160423_102709552	3300012920	Surface Seawater	MMAKKEPKTTNEHLINIYNKIDTLENNHIPHLEKEVKKLNYVLWAIGFMVATQFIAFVLQRL*
Ga0160423_103969173	3300012920	Surface Seawater	MTKIVPKTTKEHIVNIYNKIENLESNHIWHLQRDLKRLNYVLWTIGFMVATQFIAWVLRMVG*
Ga0160423_104913832	3300012920	Surface Seawater	MNKIAPKTTKEHIVNIYNKIELLETNHIYHLQKEVRKLNYVLWTIGFMVATQFIAWVLRMVG*
Ga0160423_109282432	3300012920	Surface Seawater	TTTKEHIVNIYNKIEQLETNHIYHLQKEVKRLNYVLWTVGFMVASQFIAMILKVFQ*
Ga0163109_1006593710	3300012936	Surface Seawater	MTKIAPKTTKEHIVNIYNKIELLETNHIYHLQKEVRKLNYILWTIAFMVATQFISWILRMVG*
Ga0163111_125558532	3300012954	Surface Seawater	MAKKEPKTTNEHLINIYNKIDTLENNHIPHLEKEVKKLNYVLWAIGFMVATQFIAFVLQRF*
Ga0181373_10375221	3300017721	Marine	NKITPKTTKEHIVNIYNKIELLETNHIHHLQIEVKKLNRILYGIGFMVATQFIAWILRMV
Ga0181398_10081129	3300017725	Seawater	MTKIAPKTTKEHIVNIYNKIELLETNHIHHLQLEVKKLNRILYAIGFMVATQFIAWGLKFFS
Ga0181401_100051824	3300017727	Seawater	MSKIEPTTTKEHIVNIYNKIEQLETNHIHHLQKDVKKLNYILITIGFMVASQFIAMILKVVG
Ga0181433_100574512	3300017739	Seawater	MNKIAPKTTKEHIVNIYNKIELLETNHIYHLQQEVKKLNRILYGIGFMVATQFIAWGLKFFN
Ga0181421_11529231	3300017741	Seawater	MNKITPKTTKEHIVNIYNKIELLETNHIHHLQLEVKKLNRILYGIGFMVATQFIAWILRMVQ
Ga0181382_11630243	3300017756	Seawater	MNKITPKTTKEHIVNIYNKIELLETNHIHHLQIEVKKLNRILYGIGFMVATQFIAWILRM
Ga0181413_12564032	3300017765	Seawater	MTKILPKTTKEHIINIYNKIELLETNHIHHLQKEVRKLNYVLWTIGFMVATQFIAFVLRIIG
Ga0181425_12797113	3300017771	Seawater	MNKITPKTTKEHIVNIYNKIELLETNHIHHLQLEVKKLNRILYGIGFMVA
Ga0181386_11137082	3300017773	Seawater	MSKIEPTTTKEHIVNIYNKIEQLETNHIHHLQKDVKKLNYILITIGFMVASQFIAMILKVIE
Ga0181575_106699942	3300020055	Salt Marsh	MKQIRPVTTKEHLVNIYNKIDTLETNHIYHLQLEIKKLNKILYGVGFMIATQFITWVLKFLESWI
Ga0211484_10795062	3300020269	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIHHLQKEVKKLNYILWTIGFMVATQFISWVLRILQ
Ga0211658_10503602	3300020274	Marine	MTKIVPKTTKEHIVNIYNKIENLESNHIWHLQRDLKRLNYVLWTIGFMVATQFIAWVLRMVG
Ga0211621_10338432	3300020289	Marine	MAKLEPKTSKEHLVNLYNKIEHLETNHIYHLQKEVKKLNYVLWAIGFMVGTQFIAFVLSRIEWI
Ga0211616_10698091	3300020306	Marine	HLVNLYNKIEHLETNHIYHLQKEVKKLNYVLWAIGFMVGTQFIAFVLSRIEWI
Ga0211485_10825582	3300020313	Marine	MTKIVPKTTKEHIVHIYNKIDVLETNHIWHLQKSIQRLNYVLWTVGFMVATQFIAWVLRMVE
Ga0211666_103915161	3300020392	Marine	MSKITPKTTKEHIVNIYNKIEQLESNHIYHLQQEVKKLNRILYAVGFMVATQFIAWGLKFFS
Ga0211617_100125346	3300020401	Marine	MAKLEPKTSKEHLVNLYNKIEHLETNHIYHLQKEVKKLNYVLWAIGFMVATQFIAFVLQRVQWI
Ga0211617_100799382	3300020401	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIHHLQKEVRKLNYVLWTVGFMVATQFIAWVLRMVG
Ga0211617_102397182	3300020401	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIFHLQKEVRKLNYILWTIGFMVATQFISWILRMLG
Ga0211659_102521262	3300020404	Marine	MAKIEPTTTKEHIVNIYNKIEQLETNHIYHLQKEVKRLNYVLWTVGFMVASQFIAMILKVFQ
Ga0211668_100366445	3300020406	Marine	MNKIAPKTTKEHIVNIYNKIELLETNHIYHLQQEVKKLNRILYGIGFMVATQFIAWGLKFFS
Ga0211699_100020327	3300020410	Marine	MSRITPKTTKEHIVNIYNKIELLETNHIHHLQKEVKKLNYILWTIGFMVATQFISWILRMLQ
Ga0211699_100458833	3300020410	Marine	MTKITPKTTKEHIINIYNKIELLETNHIHHLQKEVRKLNYVLWTIGFMVATQFIAFVLRIIG
Ga0211702_100162583	3300020422	Marine	MTKILPKTTKEHIINIYNKIELLESNHISHLQKEVRKLNYVLWTIGFMVATQFIAFVLRMIG
Ga0211620_102150673	3300020424	Marine	HLVNLYNKIEHLETNHIYHLQKEVKKLNYVLWAIGFMVGTQFIAFVLSRVEWI
Ga0211622_101587912	3300020430	Marine	MSKIVPKTTKEHIVNIYNKIELLEKNHIWHLQREVRKLNYVLWTIGFMVATQFISWVLRMVG
Ga0211622_103726192	3300020430	Marine	IMTKIAPKTTKEHIVNIYNKIDLLETNHIFHLQKEVRKLNYVLWTIGFMVTTQFIAWVLRMVG
Ga0211565_1000182416	3300020433	Marine	MAKIEPKTTKEHLVNIYNKIELIESNHIYHLQKEVKKLNYVLWAIGFMVATQFIAFVLQR
Ga0211708_100288412	3300020436	Marine	MTRITPKTTKEHIINIYNKIELLETNHIHHLQKEVRKLNYVLWTIGFMVATQFIAFVLRIIG
Ga0211708_103084402	3300020436	Marine	MAKLEPKTSKEHLVNLYNKIEHLETNHIYHLQKEVKKLNYVLWAIGFMVGTQFIAFVLSRLEWI
Ga0211708_104957792	3300020436	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIYHLQKEVRKLNYVLWTIGFMVTTQFIAWVLRMLS
Ga0211539_101755653	3300020437	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIFHLQKEVRKLNYVLWTIGFMVTTQFIAWVLRMLG
Ga0211558_100135351	3300020439	Marine	TKEHLVNIYNKIDTLENNHIHHLEKEVKKLNYVLWAIGFMVATQFIAFVLQRF
Ga0211558_1001845515	3300020439	Marine	SKEHLVNLYNKIENLETNHIYHLQKEVKKLNYVLWAIGFMVATQFIAFLLQRF
Ga0211559_105462812	3300020442	Marine	MMAKKEPKTTNEHLINIYNKIDTLENNHIPHLEKEVKKLNYVLWAIGFMVATQFIAFVLQRF
Ga0211641_100362082	3300020450	Marine	MSKITPKTTKEHIVNIYNKIELLETNHIFHLQKEVRKLNYILWTIGFMVATQFISWILRMVQ
Ga0211641_102459103	3300020450	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIWHLQKSVQRLNYVLWTIGFMVATQFIAWVLRMVG
Ga0211664_100005222	3300020455	Marine	MAKLEPKTTKEHIANIYNKIEQLETNHIYHLQKDVKRLNFVLMTIGFMVASQFIAMIIKVLG
Ga0211475_102641683	3300020468	Marine	MAEIKPTTTKEHIVNIYNKIEKLETNHIYHLQKEVKRLNYVLLTVGFMVTSQFIAMIFKVFQ
Ga0211614_101951011	3300020471	Marine	MTKIAPKTTKEHIVNIYNKIEVLETNHIWHLQRSIQRLNYVLWTVGFMVATQFISWVLRMVG
Ga0211614_105588782	3300020471	Marine	VMAKLEPKTSKEHLVNLYNKIEHLETNHIYHLQKEVKKLNYVLWAIGFMVATQFIAFVLQRVQWI
Ga0208157_11164771	3300025086	Marine	MNKITPKTTKEHIVNIYNKIELLETNHIHHLQIEVKKLNRILYGIGFMVATQFIAWILRMVG
Ga0208157_11449882	3300025086	Marine	MSKITPKTTKEHIVNIYNKIELLETNHIHHLQLEVKKLNRILYGIGFMVATQFIAWVLRMVQ
Ga0208159_100555810	3300025101	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIWHLQREVRKLNYVLWTVGFMVATQFIAWVLRMVG
Ga0209348_10087237	3300025127	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIFHLQKEVRKLNYVLWTIGFMVTTQFIAWVLRMVG
Ga0209348_10483344	3300025127	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIHHLQKAVQRLNYVLWTVGFMVATQFIAWVLRMVG
Ga0208919_10110983	3300025128	Marine	MAKLEPKTTKEHIANIYNKIEQLETNHIFHLQKDVKRLNFVLMTIGFMVASQFIAMIIKVLE
Ga0209645_10196854	3300025151	Marine	MNKIAPKTTKEHIVNIYNKIELLETNHIHHLQKEVRKLNYVLWTIGFMVATQFIALVLRMVG
Ga0135227_10081702	3300029302	Marine Harbor	MNKIAPKTTKEHIVNIYNKIELLETNHIHHLQREVRKLNYVLWTIGFMVATQFIAWVLRMVG
Ga0183683_10002735	3300029309	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIYHLQQEVKKLNRILYAIGFMVATQFIAWVLRMVG
Ga0183683_100055725	3300029309	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIHHLQKEVRKLNYVLWTIGFMVATQFIAWVLRMVG
Ga0183683_10009329	3300029309	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIYHLQKEVRKLNYVLWTIGFMVTTQFIAWVLRMVG
Ga0183683_10027004	3300029309	Marine	MTKIAPKTTKEHIVNIYNKIDVLETNHIWHLQKSIQRLNYVLWTIGFMVATQFIAWVLRMVG
Ga0183683_10079655	3300029309	Marine	MAKLEPKTSKEHLVNLYNKIENLETNHIYHLQKEVKKLNYVLWAIGFMVGTQFIAFVLSRVEWI
Ga0183683_10082362	3300029309	Marine	MTKITPKTTKEHIVNIYNKIELLETNHIHHLQKEVRKLNYVLWTIAFMVATQFISWILRMVG
Ga0183683_10087882	3300029309	Marine	MTKIAPKTTKEHIVNIYNKIENLESNHIWHLQRDLKRLNYVLWTIGFMVATQFIAWVLRMVE
Ga0183683_10093933	3300029309	Marine	MTKITPKTTKEHIVNIYNKIELLETNHIFHLQQEVKKLNRILYAIGFMVATQFIAWGLKFFN
Ga0183683_10147433	3300029309	Marine	MTKIVPKTTKEHIVNIYNKIELLEKNHIWHLQREVRKLNYVLWTIGFMVATQFISWVLRMVE
Ga0183683_10281283	3300029309	Marine	MAKLEPKTSKEHLVNLYNKIEHLETNHIYHLQKEVKKLNYVLWAVGFMVGTQFIAFVLSRIEWI
Ga0183683_10290923	3300029309	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIHHLQMEVKKLNRILYGIGFMVATQFIAWILRMVG
Ga0185543_10314503	3300029318	Marine	MSKITPKTTKEHIVNIYNKIDLLETNHIYHLQKEVKKLNYILWTIGFMVATQFISWILRMVQ
Ga0185543_10334853	3300029318	Marine	MSKIVPKTTKEHIVNIYNKIELLEKNHIWHLQRDVRKLNYVLWTVGFMVSTQFIAWVLRMVG
Ga0183748_10027889	3300029319	Marine	MTKIAPKTTKEHIVNIYNKIELLETNHIYHLQKEVKKLNYILWTIGFMVATQFISWILRMVQ
Ga0310343_104702963	3300031785	Seawater	MMAKKEPKTTNEHLINIYNKIDTLENNHIPHLEKEVKKLNYVLWAIGFMVATQFISFVVQRF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095599

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences